Pregenerated sensors for TERB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052616Ensembl transcript IDs: ENSMUST00000064576.8, ENSMUST00000159713.8, ENSMUST00000161520.8
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGACCGAATCTCCTCCAGTCACAGGGCTGCACAGCTGGGGCCTTTaGTCAGCCTGTGGTATTTGTGAGCAAGGTCTACAGCCCTTCGTC | + |
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Preference number: 1 (lower is better) Translates to: RTESPPVTGLHSWGL*SACGICEQGLQPFV Trigger: GACGAAGGGCTGTAGACCTTGCTCACAAATACCACAGGCTGATCAAAGGCCCCAGCTGTGCAGCCCTGTGACTGGAGGAGATTCGGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR CCA 90 bp | ATGTACAATCTTACTCTGCCCTTTCTCCTTACAGAAAGGATGAACTaGATTTGTGTTCTTCTTCCGAGTCGTCAGTTGGTTTTCATTTGC | + |
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Preference number: 1 (lower is better) Translates to: MYNLTLPFLLTERMN*ICVLLPSRQLVFIC Trigger: GCAAATGAAAACCAACTGACGACTCGGAAGAAGAACACAAATCCAGTTCATCCTTTCTGTAAGGAGAAAGGGCAGAGTAAGATTGTACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR GCA 90 bp | CTGGTTTATATCCTTATCTTCTGCTCTGGTACCTCCAGTACTATCTaGACAGAGACGTTTCAAATTGGTCTGTATGTTTACTTTCATAGA | + |
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Preference number: 1 (lower is better) Translates to: LVYILIFCSGTSSTI*TETFQIGLYVYFHR Trigger: TCTATGAAAGTAAACATACAGACCAATTTGAAACGTCTCTGTGCAGATAGTACTGGAGGTACCAGAGCAGAAGATAAGGATATAAACCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR-3UTR GCA 90 bp | GACCGAATCTCCTCCAGTCACAGGGCTGCACAGCTGGGGCCTTTGATCAGCCTGGGAACAGCTGTCAGTTaGTTGAATACCAACTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: DRISSSHRAAQLGPLISLGTAVS*LNTNFS Trigger: AGAGAAGTTGGTATTCAAGCAACTGACAGCTGTTCC...CAGGCTGATCAAAGGCCCCAGCTGTGCAGCCCTGTGACTGGAGGAGATTCGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR-3UTR GCA 90 bp | GACCGAATCTCCTCCAGTCACAGGGCTGCACAGCTGGGGCCTTTGATCAGCCTGACCTCCAGTACTATCTaGACAGAGACGTTTCAAATT | + |
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Preference number: 2 (lower is better) Translates to: DRISSSHRAAQLGPLISLTSSTI*TETFQI Trigger: AATTTGAAACGTCTCTGTGCAGATAGTACTGGAGGT...CAGGCTGATCAAAGGCCCCAGCTGTGCAGCCCTGTGACTGGAGGAGATTCGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGCCTTTGATCAGCCTGTGGTATTTGTGAGCAAGGTCTACAGCCCTTCGTCCTTCCGAGTCGTCAGTTaGTTTTCATTTGCACAAGCT | + |
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Preference number: 2 (lower is better) Translates to: GAFDQPVVFVSKVYSPSSFRVVS*FSFAQA Trigger: AGCTTGTGCAAATGAAAACCAACTGACGACTCGGAA...GGACGAAGGGCTGTAGACCTTGCTCACAAATACCACAGGCTGATCAAAGGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR-3UTR TCA 90 bp | TCTATTTTAAGAGTCCAAACAAAGGACCGAATCTCCTCCAGTCACAGGGCTGCAGCCCTTCGTCCTTTCTaGAAGGGGAAAGACCACAAA | + |
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Preference number: 2 (lower is better) Translates to: SILRVQTKDRISSSHRAAALRPF*KGKDHK Trigger: TTTGTGGTCTTTCCCCTTTCAGAAAGGACGAAGGGC...TGCAGCCCTGTGACTGGAGGAGATTCGGTCCTTTGTTTGGACTCTTAAAATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR-3UTR TCA 90 bp | TATTTTAAGAGTCCAAACAAAGGACCGAATCTCCTCCAGTCACAGGGCTGCACAAGCCTGTGGTATTTGTaGGCAAGGTCTACAGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: YFKSPNKGPNLLQSQGCTSLWYL*ARSTAL Trigger: AAGGGCTGTAGACCTTGCTCACAAATACCACAGGCT...TGTGCAGCCCTGTGACTGGAGGAGATTCGGTCCTTTGTTTGGACTCTTAAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR-3UTR TCA 90 bp | TCTATTTTAAGAGTCCAAACAAAGGACCGAATCTCCTCCAGTCACAGGGCTGCAACCTGGTCACTCGATTaGGAAACAGAATCCTTTTGG | + |
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Preference number: 2 (lower is better) Translates to: SILRVQTKDRISSSHRAATWSLD*ETESFW Trigger: CCAAAAGGATTCTGTTTCTCAATCGAGTGACCAGGT...TGCAGCCCTGTGACTGGAGGAGATTCGGTCCTTTGTTTGGACTCTTAAAATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR-3UTR GCA 90 bp | TATTTTAAGAGTCCAAACAAAGGACCGAATCTCCTCCAGTCACAGGGCTGCACAGTTTTCTTGCTACTATaGAACCAGTTCTGGGCTCGA | + |
|
Preference number: 2 (lower is better) Translates to: YFKSPNKGPNLLQSQGCTVFLLL*NQFWAR Trigger: TCGAGCCCAGAACTGGTTGCATAGTAGCAAGAAAAC...TGTGCAGCCCTGTGACTGGAGGAGATTCGGTCCTTTGTTTGGACTCTTAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161520.8 |
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| 3UTR-3UTR CCA 90 bp | GATCAGCCTGTGGTATTTGTGAGCAAGGTCTACAGCCCTTCGTCCTTTCTGAAAACAGAAAGGATGAACTaGATTTGTGTTCTTCTTCCG | + |
|
Preference number: 2 (lower is better) Translates to: DQPVVFVSKVYSPSSFLKTERMN*ICVLLP Trigger: CGGAAGAAGAACACAAATCCAGTTCATCCTTTCTGT...TTTCAGAAAGGACGAAGGGCTGTAGACCTTGCTCACAAATACCACAGGCTGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR-3UTR TCA 90 bp | TCTATTTTAAGAGTCCAAACAAAGGACCGAATCTCCTCCAGTCACAGGGCTGCACTATTTTTGACAGTATaGGGCAGATGTTTAAGGACC | + |
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Preference number: 2 (lower is better) Translates to: SILRVQTKDRISSSHRAALFLTV*GRCLRT Trigger: GGTCCTTAAACATCTGCCTCATACTGTCAAAAATAG...TGCAGCCCTGTGACTGGAGGAGATTCGGTCCTTTGTTTGGACTCTTAAAATAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGAGCAAGGTCTACAGCCCTTCGTCCTTTCTGAAAGGGGAAAGACCACAAAATGTACAATCTTACTCTaGCCTTTCTCCTTACAGAAA | + |
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Preference number: 2 (lower is better) Translates to: CEQGLQPFVLSERGKTTKCTILL*PFSLQK Trigger: TTTCTGTAAGGAGAAAGGGCAGAGTAAGATTGTACA...TTTTGTGGTCTTTCCCCTTTCAGAAAGGACGAAGGGCTGTAGACCTTGCTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR-3UTR TCA 90 bp | TATTTTAAGAGTCCAAACAAAGGACCGAATCTCCTCCAGTCACAGGGCTGCACAGGGTGGTTCAATATATaGAAATCCACCAACATAACT | + |
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Preference number: 2 (lower is better) Translates to: YFKSPNKGPNLLQSQGCTGWFNI*KSTNIT Trigger: AGTTATGTTGGTGGATTTTCATATATTGAACCACCC...TGTGCAGCCCTGTGACTGGAGGAGATTCGGTCCTTTGTTTGGACTCTTAAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161520.8 |
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| 3UTR CAA 90 bp | ACAGAAAGGATGAACTGGATTTGTGTTCTTCTTCCGAGTCGTCAGTaGGTTTTCATTTGCACAAGCTTTAGACATGATTTCACTGGGCTT | + |
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Preference number: 2 (lower is better) Translates to: TERMNWICVLLPSRQ*VFICTSFRHDFTGL Trigger: AAGCCCAGTGAAATCATGTCTAAAGCTTGTGCAAATGAAAACCAACTGACGACTCGGAAGAAGAACACAAATCCAGTTCATCCTTTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR-3UTR TCA 90 bp | AATTCTATTTTAAGAGTCCAAACAAAGGACCGAATCTCCTCCAGTCACAGGGCTCCTGCTTTCTATTTTTaGCAGTATGAGGCAGATGTT | + |
|
Preference number: 2 (lower is better) Translates to: NSILRVQTKDRISSSHRAPAFYF*QYEADV Trigger: AACATCTGCCTCATACTGTCAAAAATAGAAAGCAGG...AGCCCTGTGACTGGAGGAGATTCGGTCCTTTGTTTGGACTCTTAAAATAGAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR CAA 90 bp | AAAGGCTGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTaGACCTCACGGAGGGATTCTAATTTCCACACTGAAAATGCACTT | + |
|
Preference number: 2 (lower is better) Translates to: KGWSLTIRKSKGTLH*TSRRDSNFHTENAL Trigger: AAGTGCATTTTCAGTGTGGAAATTAGAATCCCTCCGTGAGGTCAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCAGCCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGCAGTAGATTCTTTACAAAGTTGTCTTCTTCTACAGGGAGTCAGCAAAATTACACTGGTATGCACATaGGTGCAAAAACTTGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: EAVDSLQSCLLLQGVSKITLVCT*VQKLAK Trigger: TTTAGCAAGTTTTTGCACTCATGTGCATACCAGTGT...AATTTTGCTGACTCCCTGTAGAAGAAGACAACTTTGTAAAGAATCTACTGCCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTATGCACATGAGTGCAAAAACTTGCTAAAATTTCGGCTGTTGAGGAGTTTTTATATCCTTATCTTCTaGTCTGGTACCTCCAGTACT | + |
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Preference number: 2 (lower is better) Translates to: WYAHECKNLLKFRLLRSFYILIF*SGTSST Trigger: AGTACTGGAGGTACCAGAGCAGAAGATAAGGATATA...AAAACTCCTCAACAGCCGAAATTTTAGCAAGTTTTTGCACTCATGTGCATACCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR-3UTR GCA 90 bp | TACAATCTTACTCTGCCCTTTCTCCTTACAGAAAGGATGAACTGGATTTGTGTTTATATCCTTATCTTCTaGTCTGGTACCTCCAGTACT | + |
|
Preference number: 2 (lower is better) Translates to: YNLTLPFLLTERMNWICVYILIF*SGTSST Trigger: AGTACTGGAGGTACCAGAGCAGAAGATAAGGATATA...AACACAAATCCAGTTCATCCTTTCTGTAAGGAGAAAGGGCAGAGTAAGATTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR-3UTR GCA 90 bp | AATTCTATTTTAAGAGTCCAAACAAAGGACCGAATCTCCTCCAGTCACAGGGCTTCTGTTTCTGGTACCTaGTTTCTATTTTTGACAGTA | + |
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Preference number: 2 (lower is better) Translates to: NSILRVQTKDRISSSHRASVSGT*FLFLTV Trigger: TACTGTCAAAAATAGAAAGCAGGTACCAGAAACAGA...AGCCCTGTGACTGGAGGAGATTCGGTCCTTTGTTTGGACTCTTAAAATAGAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR-3UTR TCA 90 bp | TTATCAGTACTAAGGTGGACTTTGGCACTAGACAAAAATACTGAAATGCAGCGTCAATACAATGCTAAGTaGTGTTTAAAGGCTGGTCTT | + |
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Preference number: 2 (lower is better) Translates to: LSVLRWTLALDKNTEMQRQYNAK*CLKAGL Trigger: AAGACCAGCCTTTAAACATCACTTAGCATTGTATTG...ACGCTGCATTTCAGTATTTTTGTCTAGTGCCAAAGTCCACCTTAGTACTGATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAAATTCTATTTTAAGAGTCCAAACAAAGGACCGAATCTCCTCCAGTCACAGATAATGACTTTATGGTaGACACACTGGTATGCACAT | + |
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Preference number: 2 (lower is better) Translates to: KKFYFKSPNKGPNLLQSQIMTLW*THWYAH Trigger: ATGTGCATACCAGTGTGTTCACCATAAAGTCATTAT...CTGTGACTGGAGGAGATTCGGTCCTTTGTTTGGACTCTTAAAATAGAATTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTGGAACAGCTGTCAGTTGCTTGAATACCAACTTCTCTATCTATTATGTCTAACCTCCAGTACTATCTaGACAGAGACGTTTCAAATT | + |
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Preference number: 2 (lower is better) Translates to: FWNSCQLLEYQLLYLLCLTSSTI*TETFQI Trigger: AATTTGAAACGTCTCTGTGCAGATAGTACTGGAGGT...TAGACATAATAGATAGAGAAGTTGGTATTCAAGCAACTGACAGCTGTTCCAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR-3UTR CAA 90 bp | GACCGAATCTCCTCCAGTCACAGGGCTGCACAGCTGGGGCCTTTGATCAGCCTGAGATTCTTTACAAAGTaGTCTTCTTCTACAGGGAGT | + |
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Preference number: 3 (lower is better) Translates to: DRISSSHRAAQLGPLISLRFFTK*SSSTGS Trigger: ACTCCCTGTAGAAGAAGACAACTTTGTAAAGAATCT...CAGGCTGATCAAAGGCCCCAGCTGTGCAGCCCTGTGACTGGAGGAGATTCGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR-3UTR CAA 90 bp | AATTCTATTTTAAGAGTCCAAACAAAGGACCGAATCTCCTCCAGTCACAGGGCTGCACAGCTGGGGCCTTaGATCAGCCTGTGGTATTTG | + |
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Preference number: 3 (lower is better) Translates to: NSILRVQTKDRISSSHRAAQLGP*ISLWYL Trigger: CAAATACCACAGGCTGATCAAAGGCCCCAGCTGTGC...AGCCCTGTGACTGGAGGAGATTCGGTCCTTTGTTTGGACTCTTAAAATAGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR GCA 72 bp | GCGAAGCTCTCTAGACTGGTTTATATCCTTATCTTCTaGTCTGGTACCTCCAGTACTATCTGCACAGAGACG | + |
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Preference number: 3 (lower is better) Translates to: AKLSRLVYILIF*SGTSSTICTET Trigger: CGTCTCTGTGCAGATAGTACTGGAGGTACCAGAGCAGAAGATAAGGATATAAACCAGTCTAGAGAGCTTCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR-3UTR CAA 90 bp | TCCATAGCCTCTGGAATGCTGGTATTTAAGGCCTGTGCCTCCAAACCTGGAAGTCATGAGTGCAAAAACTaGCTAAAATTTCGGCTGTTG | + |
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Preference number: 3 (lower is better) Translates to: SIASGMLVFKACASKPGSHECKN*LKFRLL Trigger: CAACAGCCGAAATTTTAGCAAGTTTTTGCACTCATG...ACTTCCAGGTTTGGAGGCACAGGCCTTAAATACCAGCATTCCAGAGGCTATGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR-3UTR CAA 90 bp | GATCAGCCTGTGGTATTTGTGAGCAAGGTCTACAGCCCTTCGTCCTTTCTGAAACATGAGTGCAAAAACTaGCTAAAATTTCGGCTGTTG | + |
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Preference number: 3 (lower is better) Translates to: DQPVVFVSKVYSPSSFLKHECKN*LKFRLL Trigger: CAACAGCCGAAATTTTAGCAAGTTTTTGCACTCATG...TTTCAGAAAGGACGAAGGGCTGTAGACCTTGCTCACAAATACCACAGGCTGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR TCA 72 bp | ACAATCTTACTCTGCCCTTTCTCCTTACAGAAAGGATaGACTGGATTTGTGTTCTTCTTCCGAGTCGTCAGT | + |
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Preference number: 3 (lower is better) Translates to: TILLCPFSLQKG*TGFVFFFRVVS Trigger: ACTGACGACTCGGAAGAAGAACACAAATCCAGTTCATCCTTTCTGTAAGGAGAAAGGGCAGAGTAAGATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR GCA 72 bp | ATCCTTATCTTCTGCTCTGGTACCTCCAGTACTATCTaGACAGAGACGTTTCAAATTGGTCTGTATGTTTAC | + |
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Preference number: 3 (lower is better) Translates to: ILIFCSGTSSTI*TETFQIGLYVY Trigger: GTAAACATACAGACCAATTTGAAACGTCTCTGTGCAGATAGTACTGGAGGTACCAGAGCAGAAGATAAGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR GCA 72 bp | AAACTTGCTAAAATTTCGGCTGTTGAGGAGTTTTCTTaGTACTATGCAACCAGTTCTGGGCTCGAAGTCTTT | + |
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Preference number: 3 (lower is better) Translates to: KLAKISAVEEFS*YYATSSGLEVF Trigger: AAAGACTTCGAGCCCAGAACTGGTTGCATAGTAGCAAGAAAACTCCTCAACAGCCGAAATTTTAGCAAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161520.8 |
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| 3UTR-3UTR CAA 90 bp | GAGGCAGTAGATTCTTTACAAAGTTGTCTTCTTCTACAGGGAGTCAGCAAAATTAAGGATGAACTGGATTaGTGTTCTTCTTCCGAGTCG | + |
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Preference number: 3 (lower is better) Translates to: EAVDSLQSCLLLQGVSKIKDELD*CSSSES Trigger: CGACTCGGAAGAAGAACACAAATCCAGTTCATCCTT...AATTTTGCTGACTCCCTGTAGAAGAAGACAACTTTGTAAAGAATCTACTGCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR TCA 72 bp | AGTACTAAGGTGGACTTTGGCACTAGACAAAAATACTaGAATGCAGCGTCTCACACAGTATTTGTGGCAATA | + |
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Preference number: 3 (lower is better) Translates to: STKVDFGTRQKY*NAASHTVFVAI Trigger: TATTGCCACAAATACTGTGTGAGACGCTGCATTTCAGTATTTTTGTCTAGTGCCAAAGTCCACCTTAGTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| 3UTR-3UTR CAA 90 bp | TTTCGGCTGTTGAGGAGTTTTCTTGCTACTATGCAACCTGAGCACGTATATTTTCAGAGACGTTTCAAATaGGTCTGTATGTTTACTTTC | + |
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Preference number: 3 (lower is better) Translates to: FRLLRSFLATMQPEHVYFQRRFK*VCMFTF Trigger: GAAAGTAAACATACAGACCAATTTGAAACGTCTCTG...AAAATATACGTGCTCAGGTTGCATAGTAGCAAGAAAACTCCTCAACAGCCGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159713.8 |
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| 3UTR TCA 72 bp | CATAATGACTTTATGGTGAACACACTGGTATGCACATaGGTGCAAAAACTTGCTAAAATTTCGGCTGTTGAG | + |
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Preference number: 3 (lower is better) Translates to: HNDFMVNTLVCT*VQKLAKISAVE Trigger: CTCAACAGCCGAAATTTTAGCAAGTTTTTGCACTCATGTGCATACCAGTGTGTTCACCATAAAGTCATTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR-3UTR CAA 90 bp | TACAATCTTACTCTGCCCTTTCTCCTTACAGAAAGGATGAACTGGATTTGTGTTCAGAGACGTTTCAAATaGGTCTGTATGTTTACTTTC | + |
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Preference number: 3 (lower is better) Translates to: YNLTLPFLLTERMNWICVQRRFK*VCMFTF Trigger: GAAAGTAAACATACAGACCAATTTGAAACGTCTCTG...AACACAAATCCAGTTCATCCTTTCTGTAAGGAGAAAGGGCAGAGTAAGATTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR CAA 72 bp | CAAGCTCTCCCAATAAACGTGTGCAGAAGGATCCTGTaGCAGCGTCGTTCTTCCTGGCCAGTCGAGCGCGCG | + |
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Preference number: 4 (lower is better) Translates to: QALPINVCRRIL*QRRSSWPVERA Trigger: CGCGCGCTCGACTGGCCAGGAAGAACGACGCTGCAACAGGATCCTTCTGCACACGTTTATTGGGAGAGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161520.8 |
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| CDS-3UTR TCA 90 bp | GACCGAATCTCCTCCAGTCACAGGGCTGCACAGCTGGGGCCTTTGATCAGCCTGCATTTTGAGGATTGTTaGCACATACACACAGAGTAC | + |
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Preference number: 4 (lower is better) Translates to: DRISSSHRAAQLGPLISLHFEDC*HIHTEY Trigger: GTACTCTGTGTGTATGTGTCAACAATCCTCAAAATG...CAGGCTGATCAAAGGCCCCAGCTGTGCAGCCCTGTGACTGGAGGAGATTCGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| CDS-3UTR TCA 90 bp | GGGGCCTTTGATCAGCCTGTGGTATTTGTGAGCAAGGTCTACAGCCCTTCGTCCGGAAAGAGTATTGTGTaGATCAGACTCCAGCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: GAFDQPVVFVSKVYSPSSGKSIV*IRLQLH Trigger: GTGCAGCTGGAGTCTGATTCACACAATACTCTTTCC...GGACGAAGGGCTGTAGACCTTGCTCACAAATACCACAGGCTGATCAAAGGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| CDS-3UTR GCA 90 bp | GGGGCCTTTGATCAGCCTGTGGTATTTGTGAGCAAGGTCTACAGCCCTTCGTCCCTCCACAATCCTCTGTaGAGTGACCAATGGCAAGTA | + |
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Preference number: 4 (lower is better) Translates to: GAFDQPVVFVSKVYSPSSLHNPL*SDQWQV Trigger: TACTTGCCATTGGTCACTGCACAGAGGATTGTGGAG...GGACGAAGGGCTGTAGACCTTGCTCACAAATACCACAGGCTGATCAAAGGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| CDS-3UTR TCA 90 bp | GGGGCCTTTGATCAGCCTGTGGTATTTGTGAGCAAGGTCTACAGCCCTTCGTCCAGCTGCACAAGAACTTaGCACAAAACATCCAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: GAFDQPVVFVSKVYSPSSSCTRT*HKTSSP Trigger: TGGACTGGATGTTTTGTGTCAAGTTCTTGTGCAGCT...GGACGAAGGGCTGTAGACCTTGCTCACAAATACCACAGGCTGATCAAAGGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| CDS-3UTR TCA 90 bp | TCCATAGCCTCTGGAATGCTGGTATTTAAGGCCTGTGCCTCCAAACCTGGAAGTTGTCCTGAACATCTGTaGCAGAACTTCAATACAACC | + |
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Preference number: 4 (lower is better) Translates to: SIASGMLVFKACASKPGSCPEHL*QNFNTT Trigger: GGTTGTATTGAAGTTCTGTCACAGATGTTCAGGACA...ACTTCCAGGTTTGGAGGCACAGGCCTTAAATACCAGCATTCCAGAGGCTATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| CDS-3UTR TCA 90 bp | TGTGAGCAAGGTCTACAGCCCTTCGTCCTTTCTGAAAGGGGAAAGACCACAAAAAGCTGCACAAGAACTTaGCACAAAACATCCAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: CEQGLQPFVLSERGKTTKSCTRT*HKTSSP Trigger: TGGACTGGATGTTTTGTGTCAAGTTCTTGTGCAGCT...TTTTGTGGTCTTTCCCCTTTCAGAAAGGACGAAGGGCTGTAGACCTTGCTCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| CDS-3UTR TCA 90 bp | TCAGTACTAAGGTGGACTTTGGCACTAGACAAAAATACTGAAATGCAGCGTCTCAGCCTGTGGTATTTGTaGGCAAGGTCTACAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVLRWTLALDKNTEMQRLSLWYL*ARSTAL Trigger: AAGGGCTGTAGACCTTGCTCACAAATACCACAGGCT...GAGACGCTGCATTTCAGTATTTTTGTCTAGTGCCAAAGTCCACCTTAGTACTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR GCA 90 bp | GCTTGGAGTGGTTTCATGTACAATCTTACTCTGCCCTTTCTCCTTACAGAAAGGCTCCACAATCCTCTGTaGAGTGACCAATGGCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: AWSGFMYNLTLPFLLTERLHNPL*SDQWQV Trigger: TACTTGCCATTGGTCACTGCACAGAGGATTGTGGAG...CCTTTCTGTAAGGAGAAAGGGCAGAGTAAGATTGTACATGAAACCACTCCAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
||
| CDS-3UTR GCA 90 bp | TATTTTAAGAGTCCAAACAAAGGACCGAATCTCCTCCAGTCACAGGGCTGCACACCACTCCTGTTTTGTTaGTTCTCCACAATCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YFKSPNKGPNLLQSQGCTPLLFC*FSTILC Trigger: ACAGAGGATTGTGGAGAAGCAACAAAACAGGAGTGG...TGTGCAGCCCTGTGACTGGAGGAGATTCGGTCCTTTGTTTGGACTCTTAAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
||
| CDS-3UTR TCA 90 bp | TCAGTACTAAGGTGGACTTTGGCACTAGACAAAAATACTGAAATGCAGCGTCTCCAAAACTTCCTTTTGTaGCAAAGGGTTGCCCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVLRWTLALDKNTEMQRLQNFLL*QRVAHV Trigger: CACATGGGCAACCCTTTGTCACAAAAGGAAGTTTTG...GAGACGCTGCATTTCAGTATTTTTGTCTAGTGCCAAAGTCCACCTTAGTACTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR TCA 90 bp | GATCAGCCTGTGGTATTTGTGAGCAAGGTCTACAGCCCTTCGTCCTTTCTGAAAAGCCCGGTTAAATCTTaGAATAATTCTGAAGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: DQPVVFVSKVYSPSSFLKSPVKS*NNSEVH Trigger: GTGTACTTCAGAATTATTTCAAGATTTAACCGGGCT...TTTCAGAAAGGACGAAGGGCTGTAGACCTTGCTCACAAATACCACAGGCTGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
||
| CDS-3UTR GCA 90 bp | TCCATAGCCTCTGGAATGCTGGTATTTAAGGCCTGTGCCTCCAAACCTGGAAGTCCGGAAATAAATACCTaGATCACTGTTTTGTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: SIASGMLVFKACASKPGSPEINT*ITVLFT Trigger: TGTAAACAAAACAGTGATGCAGGTATTTATTTCCGG...ACTTCCAGGTTTGGAGGCACAGGCCTTAAATACCAGCATTCCAGAGGCTATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
||
| CDS-3UTR GCA 90 bp | TATTTTAAGAGTCCAAACAAAGGACCGAATCTCCTCCAGTCACAGGGCTGCACATTACCTCAGGTCTCATaGAGTTCATTAGCCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YFKSPNKGPNLLQSQGCTLPQVS*SSLAIH Trigger: ATGAATGGCTAATGAACTGCATGAGACCTGAGGTAA...TGTGCAGCCCTGTGACTGGAGGAGATTCGGTCCTTTGTTTGGACTCTTAAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
||
| 3UTR CAA 72 bp | TCTGCCCTTTCTCCTTACAGAAAGGATGAACTGGATTaGTGTTCTTCTTCCGAGTCGTCAGTTGGTTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SALSPYRKDELD*CSSSESSVGFH Trigger: ATGAAAACCAACTGACGACTCGGAAGAAGAACACAAATCCAGTTCATCCTTTCTGTAAGGAGAAAGGGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
||
| CDS-3UTR TCA 90 bp | GCTTGGAGTGGTTTCATGTACAATCTTACTCTGCCCTTTCTCCTTACAGAAAGGCAAGCTCTGCTCACTTaGCTTTGCAAGGTTTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: AWSGFMYNLTLPFLLTERQALLT*LCKVYY Trigger: ATAATAAACCTTGCAAAGTCAAGTGAGCAGAGCTTG...CCTTTCTGTAAGGAGAAAGGGCAGAGTAAGATTGTACATGAAACCACTCCAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
||
| CDS-3UTR TCA 90 bp | GCTTGGAGTGGTTTCATGTACAATCTTACTCTGCCCTTTCTCCTTACAGAAAGGCATTTTGAGGATTGTTaGCACATACACACAGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AWSGFMYNLTLPFLLTERHFEDC*HIHTEY Trigger: GTACTCTGTGTGTATGTGTCAACAATCCTCAAAATG...CCTTTCTGTAAGGAGAAAGGGCAGAGTAAGATTGTACATGAAACCACTCCAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
||
| CDS-3UTR TCA 90 bp | TTTAAAGGCTGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGACCGCCCTTCGTCCTTTCTaGAAGGGGAAAGACCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: FKGWSLTIRKSKGTLHLTALRPF*KGKDHK Trigger: TTTGTGGTCTTTCCCCTTTCAGAAAGGACGAAGGGC...GGTCAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCAGCCTTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR TCA 90 bp | ATGTTTAAAGGCTGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGCACAGCTGGGGCCTTTaGTCAGCCTGTGGTATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: MFKGWSLTIRKSKGTLHLHSWGL*SACGIC Trigger: ACAAATACCACAGGCTGATCAAAGGCCCCAGCTGTG...CAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCAGCCTTTAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR TCA 90 bp | CAATGTAAATGGATCTGTTTCTGGTACCTGCTTTCTATTTTTGACAGTATGAGGGGAAAGAGTATTGTGTaGATCAGACTCCAGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QCKWICFWYLLSIFDSMRGKSIV*IRLQLH Trigger: GTGCAGCTGGAGTCTGATTCACACAATACTCTTTCC...CCTCATACTGTCAAAAATAGAAAGCAGGTACCAGAAACAGATCCATTTACATTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
||
| CDS-3UTR TCA 90 bp | TGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGACCTCACGGAGGCCTGCTTTCTATTTTTaGCAGTATGAGGCAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: WSLTIRKSKGTLHLTSRRPAFYF*QYEADV Trigger: AACATCTGCCTCATACTGTCAAAAATAGAAAGCAGG...CCTCCGTGAGGTCAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR GCA 90 bp | TTATCAGTACTAAGGTGGACTTTGGCACTAGACAAAAATACTGAAATGCAGCGTTCTCACAATCCTCTGTaGAGTGACCAATGGCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSVLRWTLALDKNTEMQRSHNPL*SDQWQV Trigger: TACTTGCCATTGGTCACTGCACAGAGGATTGTGAGA...ACGCTGCATTTCAGTATTTTTGTCTAGTGCCAAAGTCCACCTTAGTACTGATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAAGGCTGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGACCCCACTCCTGTTTTGTTaGTTCTCCTCTTTCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FKGWSLTIRKSKGTLHLTPLLFC*FSSFPP Trigger: AGGAGGGAAAGAGGAGAAGCAACAAAACAGGAGTGG...GGTCAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCAGCCTTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR GCA 90 bp | AAATGGATCTGTTTCTGGTACCTGCTTTCTATTTTTGACAGTATGAGGCAGATGCCACTCCTGTTTTGTTaGTTCTCCACAATCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KWICFWYLLSIFDSMRQMPLLFC*FSTILC Trigger: ACAGAGGATTGTGGAGAAGCAACAAAACAGGAGTGG...CATCTGCCTCATACTGTCAAAAATAGAAAGCAGGTACCAGAAACAGATCCATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGACCTCACGGAGGACAGAAAGGATGAACTaGATTTGTGTTCTTCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: WSLTIRKSKGTLHLTSRRTERMN*ICVLLP Trigger: CGGAAGAAGAACACAAATCCAGTTCATCCTTTCTGT...CCTCCGTGAGGTCAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR TCA 90 bp | TTCTGGAACAGCTGTCAGTTGCTTGAATACCAACTTCTCTATCTATTATGTCTACAAAACTTCCTTTTGTaGCAAAGGGTTGCCCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: FWNSCQLLEYQLLYLLCLQNFLL*QRVAHV Trigger: CACATGGGCAACCCTTTGTCACAAAAGGAAGTTTTG...TAGACATAATAGATAGAGAAGTTGGTATTCAAGCAACTGACAGCTGTTCCAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
||
| CDS-3UTR TCA 90 bp | AACTTATCAGTACTAAGGTGGACTTTGGCACTAGACAAAAATACTGAAATGCAGAGCTGCACAAGAACTTaGCACAAAACATCCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NLSVLRWTLALDKNTEMQSCTRT*HKTSSP Trigger: TGGACTGGATGTTTTGTGTCAAGTTCTTGTGCAGCT...CTGCATTTCAGTATTTTTGTCTAGTGCCAAAGTCCACCTTAGTACTGATAAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR TCA 90 bp | ATGTTTAAAGGCTGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGGGAAAGAGTATTGTGTaGATCAGACTCCAGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MFKGWSLTIRKSKGTLHLGKSIV*IRLQLH Trigger: GTGCAGCTGGAGTCTGATTCACACAATACTCTTTCC...CAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCAGCCTTTAAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR TCA 90 bp | TTTCGGCTGTTGAGGAGTTTTCTTGCTACTATGCAACCTGAGCACGTATATTTTGAATCAAGACTTTCATaGAGCAGTAATGCCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FRLLRSFLATMQPEHVYFESRLS*SSNARS Trigger: ACTTCTGGCATTACTGCTTCATGAAAGTCTTGATTC...AAAATATACGTGCTCAGGTTGCATAGTAGCAAGAAAACTCCTCAACAGCCGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159713.8 |
||
| CDS-3UTR TCA 90 bp | AACTTATCAGTACTAAGGTGGACTTTGGCACTAGACAAAAATACTGAAATGCAGACCTGGTCACTCGATTaGGAAACAGAATCCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NLSVLRWTLALDKNTEMQTWSLD*ETESFW Trigger: CCAAAAGGATTCTGTTTCTCAATCGAGTGACCAGGT...CTGCATTTCAGTATTTTTGTCTAGTGCCAAAGTCCACCTTAGTACTGATAAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR TCA 90 bp | TGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGACCTCACGGAGGATAATGACTTTATGGTaGACACACTGGTATGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: WSLTIRKSKGTLHLTSRRIMTLW*THWYAH Trigger: ATGTGCATACCAGTGTGTTCACCATAAAGTCATTAT...CCTCCGTGAGGTCAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR GCA 90 bp | TGGTATGCACATGAGTGCAAAAACTTGCTAAAATTTCGGCTGTTGAGGAGTTTTTCTTTTACCAAGCTCTaGTCACTTGACTTTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: WYAHECKNLLKFRLLRSFSFTKL*SLDFAR Trigger: CCTTGCAAAGTCAAGTGAGCAGAGCTTGGTAAAAGA...AAAACTCCTCAACAGCCGAAATTTTAGCAAGTTTTTGCACTCATGTGCATACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
||
| CDS-3UTR GCA 90 bp | TGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGACCTCACGGAGGTGTACAATCTTACTCTaGCCTTTCTCCTTACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WSLTIRKSKGTLHLTSRRCTILL*PFSLQK Trigger: TTTCTGTAAGGAGAAAGGGCAGAGTAAGATTGTACA...CCTCCGTGAGGTCAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| 3UTR CAA 72 bp | AACAGCTTGAGAAACTTATCAGTACTAAGGTGGACTTaGGCACTAGACAAAAATACTGAAATGCAGCGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NSLRNLSVLRWT*ALDKNTEMQRL Trigger: GAGACGCTGCATTTCAGTATTTTTGTCTAGTGCCAAAGTCCACCTTAGTACTGATAAGTTTCTCAAGCTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR TCA 90 bp | AGTACTATCTGCACAGAGACGTTTCAAATTGGTCTGTATGTTTACTTTCATAGACAAAACTTCCTTTTGTaGCAAAGGGTTGCCCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: STICTETFQIGLYVYFHRQNFLL*QRVAHV Trigger: CACATGGGCAACCCTTTGTCACAAAAGGAAGTTTTG...TCTATGAAAGTAAACATACAGACCAATTTGAAACGTCTCTGTGCAGATAGTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
||
| CDS-3UTR TCA 90 bp | GTACCTCCAGTACTATCTGCACAGAGACGTTTCAAATTGGTCTGTATGTTTACTAGCCCGGTTAAATCTTaGAATAATTCTGAAGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: VPPVLSAQRRFKLVCMFTSPVKS*NNSEVH Trigger: GTGTACTTCAGAATTATTTCAAGATTTAACCGGGCT...AGTAAACATACAGACCAATTTGAAACGTCTCTGTGCAGATAGTACTGGAGGTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
||
| CDS-3UTR TCA 90 bp | TTTAAAGGCTGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGACCTGTCCTGAACATCTGTaGCAGAACTTCAATACAACC | + |
|
Preference number: 4 (lower is better) Translates to: FKGWSLTIRKSKGTLHLTCPEHL*QNFNTT Trigger: GGTTGTATTGAAGTTCTGTCACAGATGTTCAGGACA...GGTCAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCAGCCTTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR TCA 90 bp | CAATGTAAATGGATCTGTTTCTGGTACCTGCTTTCTATTTTTGACAGTATGAGGTGTCCTGAACATCTGTaGCAGAACTTCAATACAACC | + |
|
Preference number: 4 (lower is better) Translates to: QCKWICFWYLLSIFDSMRCPEHL*QNFNTT Trigger: GGTTGTATTGAAGTTCTGTCACAGATGTTCAGGACA...CCTCATACTGTCAAAAATAGAAAGCAGGTACCAGAAACAGATCCATTTACATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
||
| CDS-3UTR TCA 90 bp | TTATCAGTACTAAGGTGGACTTTGGCACTAGACAAAAATACTGAAATGCAGCGTGAATCAAGACTTTCATaGAGCAGTAATGCCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSVLRWTLALDKNTEMQRESRLS*SSNARS Trigger: ACTTCTGGCATTACTGCTTCATGAAAGTCTTGATTC...ACGCTGCATTTCAGTATTTTTGTCTAGTGCCAAAGTCCACCTTAGTACTGATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR TCA 90 bp | AAATGGATCTGTTTCTGGTACCTGCTTTCTATTTTTGACAGTATGAGGCAGATGGAATCAAGACTTTCATaGAGCAGTAATGCCAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KWICFWYLLSIFDSMRQMESRLS*SSNARS Trigger: ACTTCTGGCATTACTGCTTCATGAAAGTCTTGATTC...CATCTGCCTCATACTGTCAAAAATAGAAAGCAGGTACCAGAAACAGATCCATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
||
| CDS-3UTR TCA 90 bp | AACTTATCAGTACTAAGGTGGACTTTGGCACTAGACAAAAATACTGAAATGCAGCAGCTGTCAGTTGCTTaGATACCAACTTCTCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: NLSVLRWTLALDKNTEMQQLSVA*IPTSLS Trigger: AGATAGAGAAGTTGGTATTCAAGCAACTGACAGCTG...CTGCATTTCAGTATTTTTGTCTAGTGCCAAAGTCCACCTTAGTACTGATAAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR TCA 90 bp | TTATCAGTACTAAGGTGGACTTTGGCACTAGACAAAAATACTGAAATGCAGCGTACACTGGTATGCACATaGGTGCAAAAACTTGCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSVLRWTLALDKNTEMQRTLVCT*VQKLAK Trigger: TTTAGCAAGTTTTTGCACTCATGTGCATACCAGTGT...ACGCTGCATTTCAGTATTTTTGTCTAGTGCCAAAGTCCACCTTAGTACTGATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTACTAAGGTGGACTTTGGCACTAGACAAAAATACTGAAATGCAGCGTCTCCCGGAAATAAATACCTaGATCACTGTTTTGTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: SVLRWTLALDKNTEMQRLPEINT*ITVLFT Trigger: TGTAAACAAAACAGTGATGCAGGTATTTATTTCCGG...GAGACGCTGCATTTCAGTATTTTTGTCTAGTGCCAAAGTCCACCTTAGTACTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAAGGCTGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGACCTCTTTTACCAAGCTCTaGTCACTTGACTTTGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FKGWSLTIRKSKGTLHLTSFTKL*SLDFAR Trigger: CCTTGCAAAGTCAAGTGAGCAGAGCTTGGTAAAAGA...GGTCAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCAGCCTTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAAGGCTGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGACCGGAACAGCTGTCAGTTaGTTGAATACCAACTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FKGWSLTIRKSKGTLHLTGTAVS*LNTNFS Trigger: AGAGAAGTTGGTATTCAAGCAACTGACAGCTGTTCC...GGTCAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCAGCCTTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR CCA 90 bp | AACTTATCAGTACTAAGGTGGACTTTGGCACTAGACAAAAATACTGAAATGCAGTTCCGAGTCGTCAGTTaGTTTTCATTTGCACAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NLSVLRWTLALDKNTEMQFRVVS*FSFAQA Trigger: AGCTTGTGCAAATGAAAACCAACTGACGACTCGGAA...CTGCATTTCAGTATTTTTGTCTAGTGCCAAAGTCCACCTTAGTACTGATAAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| 3UTR CAA 72 bp | TCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTaGACCTCACGGAGGGATTCTAATTTCCACACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLTIRKSKGTLH*TSRRDSNFHTE Trigger: TTCAGTGTGGAAATTAGAATCCCTCCGTGAGGTCAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| 3UTR CAA 72 bp | GTACCTCCAGTACTATCTGCACAGAGACGTTTCAAATaGGTCTGTATGTTTACTTTCATAGATGGGGTATTA | + |
|
Preference number: 4 (lower is better) Translates to: VPPVLSAQRRFK*VCMFTFIDGVL Trigger: TAATACCCCATCTATGAAAGTAAACATACAGACCAATTTGAAACGTCTCTGTGCAGATAGTACTGGAGGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
||
| CDS-3UTR TCA 90 bp | AACTTATCAGTACTAAGGTGGACTTTGGCACTAGACAAAAATACTGAAATGCAGCATTTTGAGGATTGTTaGCACATACACACAGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: NLSVLRWTLALDKNTEMQHFEDC*HIHTEY Trigger: GTACTCTGTGTGTATGTGTCAACAATCCTCAAAATG...CTGCATTTCAGTATTTTTGTCTAGTGCCAAAGTCCACCTTAGTACTGATAAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR GCA 90 bp | AACTTATCAGTACTAAGGTGGACTTTGGCACTAGACAAAAATACTGAAATGCAGTTACCTCAGGTCTCATaGAGTTCATTAGCCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NLSVLRWTLALDKNTEMQLPQVS*SSLAIH Trigger: ATGAATGGCTAATGAACTGCATGAGACCTGAGGTAA...CTGCATTTCAGTATTTTTGTCTAGTGCCAAAGTCCACCTTAGTACTGATAAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGGAACAGCTGTCAGTTGCTTGAATACCAACTTCTCTATCTATTATGTCTATTACCTCAGGTCTCATaGAGTTCATTAGCCATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FWNSCQLLEYQLLYLLCLLPQVS*SSLAIH Trigger: ATGAATGGCTAATGAACTGCATGAGACCTGAGGTAA...TAGACATAATAGATAGAGAAGTTGGTATTCAAGCAACTGACAGCTGTTCCAGAA 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAAGGCTGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGACCACCTCCAGTACTATCTaGACAGAGACGTTTCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: FKGWSLTIRKSKGTLHLTTSSTI*TETFQI Trigger: AATTTGAAACGTCTCTGTGCAGATAGTACTGGAGGT...GGTCAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCAGCCTTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| CDS-3UTR GCA 90 bp | AACTTATCAGTACTAAGGTGGACTTTGGCACTAGACAAAAATACTGAAATGCAGTATATCCTTATCTTCTaGTCTGGTACCTCCAGTACT | + |
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Preference number: 4 (lower is better) Translates to: NLSVLRWTLALDKNTEMQYILIF*SGTSST Trigger: AGTACTGGAGGTACCAGAGCAGAAGATAAGGATATA...CTGCATTTCAGTATTTTTGTCTAGTGCCAAAGTCCACCTTAGTACTGATAAGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| CDS-3UTR TCA 90 bp | ATGTTTAAAGGCTGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGCAAGCTCTGCTCACTTaGCTTTGCAAGGTTTATTAT | + |
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Preference number: 4 (lower is better) Translates to: MFKGWSLTIRKSKGTLHLQALLT*LCKVYY Trigger: ATAATAAACCTTGCAAAGTCAAGTGAGCAGAGCTTG...CAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCAGCCTTTAAACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| CDS-3UTR TCA 90 bp | TTTAAAGGCTGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGACCAGCCCGGTTAAATCTTaGAATAATTCTGAAGTACAC | + |
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Preference number: 4 (lower is better) Translates to: FKGWSLTIRKSKGTLHLTSPVKS*NNSEVH Trigger: GTGTACTTCAGAATTATTTCAAGATTTAACCGGGCT...GGTCAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCAGCCTTTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| CDS-3UTR TCA 90 bp | ATGTTTAAAGGCTGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGCTATTTTTGACAGTATaGGGCAGATGTTTAAGGACC | + |
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Preference number: 4 (lower is better) Translates to: MFKGWSLTIRKSKGTLHLLFLTV*GRCLRT Trigger: GGTCCTTAAACATCTGCCTCATACTGTCAAAAATAG...CAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCAGCCTTTAAACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| CDS-3UTR GCA 90 bp | CAATGTAAATGGATCTGTTTCTGGTACCTGCTTTCTATTTTTGACAGTATGAGGCCGGAAATAAATACCTaGATCACTGTTTTGTTTACA | + |
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Preference number: 4 (lower is better) Translates to: QCKWICFWYLLSIFDSMRPEINT*ITVLFT Trigger: TGTAAACAAAACAGTGATGCAGGTATTTATTTCCGG...CCTCATACTGTCAAAAATAGAAAGCAGGTACCAGAAACAGATCCATTTACATTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| CDS-3UTR GCA 90 bp | ATGTTTAAAGGCTGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGGTTATCAGTAATACATaGATCCATGGTCTTTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: MFKGWSLTIRKSKGTLHLVISNT*IHGLCH Trigger: GTGACAAAGACCATGGATGCATGTATTACTGATAAC...CAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCAGCCTTTAAACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| CDS-3UTR GCA 90 bp | AGTACTATCTGCACAGAGACGTTTCAAATTGGTCTGTATGTTTACTTTCATAGAGTTATCAGTAATACATaGATCCATGGTCTTTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: STICTETFQIGLYVYFHRVISNT*IHGLCH Trigger: GTGACAAAGACCATGGATGCATGTATTACTGATAAC...TCTATGAAAGTAAACATACAGACCAATTTGAAACGTCTCTGTGCAGATAGTACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| 3UTR CAA 72 bp | AGCACGTATATTTTAACATTCTGGAACAGCTGTCAGTaGCTTGAATACCAACTTCTCTATCTATTATGTCTA | + |
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Preference number: 4 (lower is better) Translates to: STYILTFWNSCQ*LEYQLLYLLCL Trigger: TAGACATAATAGATAGAGAAGTTGGTATTCAAGCAACTGACAGCTGTTCCAGAATGTTAAAATATACGTGCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| CDS-3UTR GCA 90 bp | ATGTTTAAAGGCTGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGTCTGTTTCTGGTACCTaGTTTCTATTTTTGACAGTA | + |
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Preference number: 4 (lower is better) Translates to: MFKGWSLTIRKSKGTLHLSVSGT*FLFLTV Trigger: TACTGTCAAAAATAGAAAGCAGGTACCAGAAACAGA...CAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCAGCCTTTAAACAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| CDS-3UTR CAA 90 bp | GGGGCCTTTGATCAGCCTGTGGTATTTGTGAGCAAGGTCTACAGCCCTTCGTCCGCACTGGAAAGAGTATaGTGTGAATCAGACTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: GAFDQPVVFVSKVYSPSSALERV*CESDSS Trigger: GCTGGAGTCTGATTCACACAATACTCTTTCCAGTGC...GGACGAAGGGCTGTAGACCTTGCTCACAAATACCACAGGCTGATCAAAGGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| CDS-3UTR CAA 90 bp | TCTATTTTAAGAGTCCAAACAAAGGACCGAATCTCCTCCAGTCACAGGGCTGCAGTGTCCACTCCTGTTTaGTTGCTTCTCCACAATCCT | + |
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Preference number: 5 (lower is better) Translates to: SILRVQTKDRISSSHRAAVSTPV*LLLHNP Trigger: AGGATTGTGGAGAAGCAACAAAACAGGAGTGGACAC...TGCAGCCCTGTGACTGGAGGAGATTCGGTCCTTTGTTTGGACTCTTAAAATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| CDS-3UTR CAA 90 bp | TGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGACCTCACGGAGGTCCACTCCTGTTTTGTaGCTTCTCCTCTTTCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: WSLTIRKSKGTLHLTSRRSTPVL*LLLFPS Trigger: GGAGGGAAAGAGGAGAAGCAACAAAACAGGAGTGGA...CCTCCGTGAGGTCAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| CDS-3UTR CAA 90 bp | TCAGTACTAAGGTGGACTTTGGCACTAGACAAAAATACTGAAATGCAGCGTCTCGTGTCCACTCCTGTTTaGTTGCTTCTCCTCTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: SVLRWTLALDKNTEMQRLVSTPV*LLLLFP Trigger: GGGAAAGAGGAGAAGCAACAAAACAGGAGTGGACAC...GAGACGCTGCATTTCAGTATTTTTGTCTAGTGCCAAAGTCCACCTTAGTACTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| CDS-3UTR CAA 90 bp | TGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGACCTCACGGAGGTGCATAGAATTTCCTTaGCTGCCTTCCAGTGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: WSLTIRKSKGTLHLTSRRCIEFP*LPSSAL Trigger: GAGAGCACTGGAAGGCAGCAAAGGAAATTCTATGCA...CCTCCGTGAGGTCAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| CDS-3UTR CAA 90 bp | TTTAAAGGCTGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGACCGCACAGCTGGGGCCTTaGATCAGCCTGTGGTATTTG | + |
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Preference number: 5 (lower is better) Translates to: FKGWSLTIRKSKGTLHLTAQLGP*ISLWYL Trigger: CAAATACCACAGGCTGATCAAAGGCCCCAGCTGTGC...GGTCAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCAGCCTTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| CDS TCA 90 bp | CTTTGTCACTATGACTGCAAGCTTAGCACTGGAAAGAGTATTGTGTaGATCAGACTCCAGCTGCACAAGAACTTGACACAAAACATCCAG | + |
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Preference number: 5 (lower is better) Translates to: LCHYDCKLSTGKSIV*IRLQLHKNLTQNIQ Trigger: CTGGATGTTTTGTGTCAAGTTCTTGTGCAGCTGGAGTCTGATTCACACAATACTCTTTCCAGTGCTAAGCTTGCAGTCATAGTGACAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064576.8 ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| CDS-3UTR CAA 90 bp | GTACCTCCAGTACTATCTGCACAGAGACGTTTCAAATTGGTCTGTATGTTTACTGTGTCCACTCCTGTTTaGTTGCTTCTCCACAATCCT | + |
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Preference number: 5 (lower is better) Translates to: VPPVLSAQRRFKLVCMFTVSTPV*LLLHNP Trigger: AGGATTGTGGAGAAGCAACAAAACAGGAGTGGACAC...AGTAAACATACAGACCAATTTGAAACGTCTCTGTGCAGATAGTACTGGAGGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| CDS TCA 90 bp | AGTGTCCACTCCTGTTTTGTTGCTTCTCCACAATCCTCTGTGCAGTaGCCAATGGCAAGTATGATGCTAAATTTTTCTCTTGAATCAAGA | + |
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Preference number: 5 (lower is better) Translates to: SVHSCFVASPQSSVQ*PMASMMLNFSLESR Trigger: TCTTGATTCAAGAGAAAAATTTAGCATCATACTTGCCATTGGTCACTGCACAGAGGATTGTGGAGAAGCAACAAAACAGGAGTGGACACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| CDS-3UTR CAA 90 bp | GTACCTCCAGTACTATCTGCACAGAGACGTTTCAAATTGGTCTGTATGTTTACTCCAAGCTCTGCTCACTaGACTTTGCAAGGTTTATTA | + |
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Preference number: 5 (lower is better) Translates to: VPPVLSAQRRFKLVCMFTPSSAH*TLQGLL Trigger: TAATAAACCTTGCAAAGTCAAGTGAGCAGAGCTTGG...AGTAAACATACAGACCAATTTGAAACGTCTCTGTGCAGATAGTACTGGAGGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| CDS-3UTR CAA 90 bp | AACTTATCAGTACTAAGGTGGACTTTGGCACTAGACAAAAATACTGAAATGCAGGCACTGGAAAGAGTATaGTGTGAATCAGACTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: NLSVLRWTLALDKNTEMQALERV*CESDSS Trigger: GCTGGAGTCTGATTCACACAATACTCTTTCCAGTGC...CTGCATTTCAGTATTTTTGTCTAGTGCCAAAGTCCACCTTAGTACTGATAAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| CDS-3UTR CAA 90 bp | TTATCAGTACTAAGGTGGACTTTGGCACTAGACAAAAATACTGAAATGCAGCGTCCAAGCTCTGCTCACTaGACTTTGCAAGGTTTATTA | + |
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Preference number: 5 (lower is better) Translates to: LSVLRWTLALDKNTEMQRPSSAH*TLQGLL Trigger: TAATAAACCTTGCAAAGTCAAGTGAGCAGAGCTTGG...ACGCTGCATTTCAGTATTTTTGTCTAGTGCCAAAGTCCACCTTAGTACTGATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| CDS-3UTR CAA 90 bp | TGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGACCTCACGGAGGCAGAGACGTTTCAAATaGGTCTGTATGTTTACTTTC | + |
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Preference number: 5 (lower is better) Translates to: WSLTIRKSKGTLHLTSRRQRRFK*VCMFTF Trigger: GAAAGTAAACATACAGACCAATTTGAAACGTCTCTG...CCTCCGTGAGGTCAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| CDS-3UTR CAA 90 bp | AACTTATCAGTACTAAGGTGGACTTTGGCACTAGACAAAAATACTGAAATGCAGAAGGATGAACTGGATTaGTGTTCTTCTTCCGAGTCG | + |
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Preference number: 5 (lower is better) Translates to: NLSVLRWTLALDKNTEMQKDELD*CSSSES Trigger: CGACTCGGAAGAAGAACACAAATCCAGTTCATCCTT...CTGCATTTCAGTATTTTTGTCTAGTGCCAAAGTCCACCTTAGTACTGATAAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| CDS-3UTR CAA 90 bp | TGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGACCTCACGGAGGAGATTCTTTACAAAGTaGTCTTCTTCTACAGGGAGT | + |
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Preference number: 5 (lower is better) Translates to: WSLTIRKSKGTLHLTSRRRFFTK*SSSTGS Trigger: ACTCCCTGTAGAAGAAGACAACTTTGTAAAGAATCT...CCTCCGTGAGGTCAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| CDS-3UTR CAA 90 bp | CAATGTAAATGGATCTGTTTCTGGTACCTGCTTTCTATTTTTGACAGTATGAGGCCAAGCTCTGCTCACTaGACTTTGCAAGGTTTATTA | + |
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Preference number: 5 (lower is better) Translates to: QCKWICFWYLLSIFDSMRPSSAH*TLQGLL Trigger: TAATAAACCTTGCAAAGTCAAGTGAGCAGAGCTTGG...CCTCATACTGTCAAAAATAGAAAGCAGGTACCAGAAACAGATCCATTTACATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| CDS GCA 90 bp | GCAATAGATCCTAATGTGTATAAGGCTGCTTCTTTTACCAAGCTCTaGTCACTTGACTTTGCAAGGTTTATTATAAACATCAAACCACCA | + |
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Preference number: 5 (lower is better) Translates to: AIDPNVYKAASFTKL*SLDFARFIINIKPP Trigger: TGGTGGTTTGATGTTTATAATAAACCTTGCAAAGTCAAGTGAGCAGAGCTTGGTAAAAGAAGCAGCCTTATACACATTAGGATCTATTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064576.8 ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| CDS-3UTR CAA 90 bp | ATGTTTAAAGGCTGGTCTTTGACCATAAGGAAAAGTAAAGGCACATTACATTTGCATGAGTGCAAAAACTaGCTAAAATTTCGGCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: MFKGWSLTIRKSKGTLHLHECKN*LKFRLL Trigger: CAACAGCCGAAATTTTAGCAAGTTTTTGCACTCATG...CAAATGTAATGTGCCTTTACTTTTCCTTATGGTCAAAGACCAGCCTTTAAACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| CDS GCA 90 bp | TCAAATTGTTTTATTCTGCATAGAATTTCCTTTGCTGCCTTCCAGTaGTCTCTAAGAGTCTCTTTTTCGCTTATGTCCTTTAGTTCAATT | + |
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Preference number: 5 (lower is better) Translates to: SNCFILHRISFAAFQ*SLRVSFSLMSFSSI Trigger: AATTGAACTAAAGGACATAAGCGAAAAAGAGACTCTTAGAGAGCACTGGAAGGCAGCAAAGGAAATTCTATGCAGAATAAAACAATTTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| CDS TCA 72 bp | TATGACTGCAAGCTTAGCACTGGAAAGAGTATTGTGTaGATCAGACTCCAGCTGCACAAGAACTTGACACAA | + |
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Preference number: 6 (lower is better) Translates to: YDCKLSTGKSIV*IRLQLHKNLTQ Trigger: TTGTGTCAAGTTCTTGTGCAGCTGGAGTCTGATTCACACAATACTCTTTCCAGTGCTAAGCTTGCAGTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064576.8 ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| CDS TCA 72 bp | AAAACATCCAGTCCACCCGAAGAGACAAAGCAGTTCTaGGCGTGTGTATTATTTGCAAGAGTAAGTCCAATA | + |
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Preference number: 6 (lower is better) Translates to: KTSSPPEETKQF*ACVLFARVSPI Trigger: TATTGGACTTACTCTTGCAAATAATACACACGCTCAGAACTGCTTTGTCTCTTCGGGTGGACTGGATGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064576.8 ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| CDS TCA 72 bp | ATCAAAACTTCCTTTTGTGACAAAGGGTTGCCCATGTaGTACTTCAGACATTCCAACAGTAACTTCAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: IKTSFCDKGLPM*YFRHSNSNFRS Trigger: TGACCTGAAGTTACTGTTGGAATGTCTGAAGTATCACATGGGCAACCCTTTGTCACAAAAGGAAGTTTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064576.8 ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| CDS TCA 72 bp | TCCTGTTTTGTTGCTTCTCCACAATCCTCTGTGCAGTaGCCAATGGCAAGTATGATGCTAAATTTTTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: SCFVASPQSSVQ*PMASMMLNFSL Trigger: AAGAGAAAAATTTAGCATCATACTTGCCATTGGTCACTGCACAGAGGATTGTGGAGAAGCAACAAAACAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| CDS TCA 72 bp | AGCGTGTGTATTATTTGCAAGAGTAAGTCCAATAAATaGGCATATAGGTCGAATTACCTCAGGTCTCATGCA | + |
|
Preference number: 6 (lower is better) Translates to: SVCIICKSKSNK*AYRSNYLRSHA Trigger: TGCATGAGACCTGAGGTAATTCGACCTATATGCTCATTTATTGGACTTACTCTTGCAAATAATACACACGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064576.8 ENSMUST00000159713.8 ENSMUST00000161520.8 |
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| CDS GCA 72 bp | TTTATTCTGCATAGAATTTCCTTTGCTGCCTTCCAGTaGTCTCTAAGAGTCTCTTTTTCGCTTATGTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FILHRISFAAFQ*SLRVSFSLMSF Trigger: AAAGGACATAAGCGAAAAAGAGACTCTTAGAGAGCACTGGAAGGCAGCAAAGGAAATTCTATGCAGAATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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| CDS CAA 72 bp | AGCAGTAATGCCAGAAGTGTAGAAACAATGTGGTACTaGGATAATACCACTGTAAAAGCAGCTGAGTTATCA | + |
|
Preference number: 6 (lower is better) Translates to: SSNARSVETMWY*DNTTVKAAELS Trigger: TGATAACTCAGCTGCTTTTACAGTGGTATTATCCAAGTACCACATTGTTTCTACACTTCTGGCATTACTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064576.8 ENSMUST00000161520.8 |
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| CDS CCA 72 bp | ACGTTTCAAATTGGTCTGTATGTTTACTTTCATAGATaGGGTATTATCCTTATAGTGTCCACTCCTGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: TFQIGLYVYFHR*GIILIVSTPVL Trigger: CAAAACAGGAGTGGACACTATAAGGATAATACCCCATCTATGAAAGTAAACATACAGACCAATTTGAAACGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064576.8 |
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