Pregenerated sensors for TEPP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090206Ensembl transcript IDs: ENSMUST00000098480.9, ENSMUST00000135142.8, ENSMUST00000153991.2, ENSMUST00000161029.9, ENSMUST00000162294.2, ENSMUST00000162555.2, ENSMUST00000212056.2
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTAGGTTTATTTCTTGAACTGAACTCCTGGGGAGAAGATGGGTGGTaGCACCATATGCCCTCTGTCCGGCTAGGGGCCCTGAGGTGGCAC | + |
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Preference number: 1 (lower is better) Translates to: LGLFLELNSWGEDGW*HHMPSVRLGALRWH Trigger: GTGCCACCTCAGGGCCCCTAGCCGGACAGAGGGCATATGGTGGCACCACCCATCTTCTCCCCAGGAGTTCAGTTCAAGAAATAAACCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098480.9 ENSMUST00000161029.9 |
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| 3UTR CCA 90 bp | GCATTAGGTTTATTTCTTGAACTGAACTCCTGGGGAGAAGATGGGTaGTGCCACCATATGCCCTCTGTCCGGCTAGGGGCCCTGAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: ALGLFLELNSWGEDG*CHHMPSVRLGALRW Trigger: CCACCTCAGGGCCCCTAGCCGGACAGAGGGCATATGGTGGCACCACCCATCTTCTCCCCAGGAGTTCAGTTCAAGAAATAAACCTAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098480.9 ENSMUST00000161029.9 |
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| 3UTR GCA 90 bp | TACAGTGAGTTTGACATGTGCTCTAGAAGTAAAGACATTGACCGGTaGAGCCCACAGCTCTTCCACTCGTTCTTTGCAGAGGGTTTGTTG | + |
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Preference number: 1 (lower is better) Translates to: YSEFDMCSRSKDIDR*SPQLFHSFFAEGLL Trigger: CAACAAACCCTCTGCAAAGAACGAGTGGAAGAGCTGTGGGCTGCACCGGTCAATGTCTTTACTTCTAGAGCACATGTCAAACTCACTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153991.2 ENSMUST00000162294.2 |
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| 3UTR CAA 90 bp | GACCGGTGCAGCCCACAGCTCTTCCACTCGTTCTTTGCAGAGGGTTaGTTGGGAGGTGCAGAGGCTGAGACACAAAGCAGACCAAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: DRCSPQLFHSFFAEG*LGGAEAETQSRPKE Trigger: CTCCTTTGGTCTGCTTTGTGTCTCAGCCTCTGCACCTCCCAACAAACCCTCTGCAAAGAACGAGTGGAAGAGCTGTGGGCTGCACCGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153991.2 ENSMUST00000162294.2 |
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| 3UTR CAA 90 bp | GTAAAGACATTGACCGGTGCAGCCCACAGCTCTTCCACTCGTTCTTaGCAGAGGGTTTGTTGGGAGGTGCAGAGGCTGAGACACAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: VKTLTGAAHSSSTRS*QRVCWEVQRLRHKA Trigger: TGCTTTGTGTCTCAGCCTCTGCACCTCCCAACAAACCCTCTGCAAAGAACGAGTGGAAGAGCTGTGGGCTGCACCGGTCAATGTCTTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153991.2 ENSMUST00000162294.2 |
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| 3UTR-3UTR TCA 90 bp | GACATGTGCTCTAGAAGTAAAGACATTGACCGGTGCAGCCCACAGCTCTTCCACGGGAGGTGCAGAGGCTaGGACACAAAGCAGACCAAA | + |
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Preference number: 2 (lower is better) Translates to: DMCSRSKDIDRCSPQLFHGRCRG*DTKQTK Trigger: TTTGGTCTGCTTTGTGTCTCAGCCTCTGCACCTCCC...GTGGAAGAGCTGTGGGCTGCACCGGTCAATGTCTTTACTTCTAGAGCACATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153991.2 ENSMUST00000162294.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGAAGTAAAGACATTGACCGGTGCAGCCCACAGCTCTTCCACTCGTTCTTTGGCGAGGCTTGAATCCTaGGCTTTGAGGCTTCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: LEVKTLTGAAHSSSTRSLARLES*ALRLLA Trigger: AGCCAGAAGCCTCAAAGCTCAGGATTCAAGCCTCGC...CAAAGAACGAGTGGAAGAGCTGTGGGCTGCACCGGTCAATGTCTTTACTTCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153991.2 ENSMUST00000162294.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGTAAAGACATTGACCGGTGCAGCCCACAGCTCTTCCACTCGTTCTTTGCAGTTGAATCCTGAGCTTTaGGGCTTCTGGCTGTGTAAG | + |
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Preference number: 2 (lower is better) Translates to: EVKTLTGAAHSSSTRSLQLNPEL*GFWLCK Trigger: CTTACACAGCCAGAAGCCTCAAAGCTCAGGATTCAA...CTGCAAAGAACGAGTGGAAGAGCTGTGGGCTGCACCGGTCAATGTCTTTACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153991.2 ENSMUST00000162294.2 |
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| 3UTR-3UTR TCA 90 bp | TCTAGAAGTAAAGACATTGACCGGTGCAGCCCACAGCTCTTCCACTCGTTCTTTTTGAATCCTGAGCTTTaGGGCTTCTGGCTGTGTAAG | + |
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Preference number: 2 (lower is better) Translates to: SRSKDIDRCSPQLFHSFFLNPEL*GFWLCK Trigger: CTTACACAGCCAGAAGCCTCAAAGCTCAGGATTCAA...AAAGAACGAGTGGAAGAGCTGTGGGCTGCACCGGTCAATGTCTTTACTTCTAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000153991.2 ENSMUST00000162294.2 |
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| 3UTR CAA 90 bp | ATGTTAAATACAGTGAGTTTGACATGTGCTCTAGAAGTAAAGACATaGACCGGTGCAGCCCACAGCTCTTCCACTCGTTCTTTGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: MLNTVSLTCALEVKT*TGAAHSSSTRSLQR Trigger: CCTCTGCAAAGAACGAGTGGAAGAGCTGTGGGCTGCACCGGTCAATGTCTTTACTTCTAGAGCACATGTCAAACTCACTGTATTTAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153991.2 ENSMUST00000162294.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGCCACTTTTGATGTTAAATACAGTGAGTTTGACATGTGCTCTAGAAGTATTGCAGAGGGTTTGTTaGGAGGTGCAGAGGCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: RQPLLMLNTVSLTCALEVLQRVC*EVQRLR Trigger: TCTCAGCCTCTGCACCTCCCAACAAACCCTCTGCAA...TACTTCTAGAGCACATGTCAAACTCACTGTATTTAACATCAAAAGTGGCTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153991.2 ENSMUST00000162294.2 |
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| 3UTR GCA 72 bp | TTTCTTGAACTGAACTCCTGGGGAGAAGATGGGTGGTaGCACCATATGCCCTCTGTCCGGCTAGGGGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: FLELNSWGEDGW*HHMPSVRLGAL Trigger: CAGGGCCCCTAGCCGGACAGAGGGCATATGGTGGCACCACCCATCTTCTCCCCAGGAGTTCAGTTCAAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098480.9 ENSMUST00000161029.9 |
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| 3UTR TCA 72 bp | GTTCTTTGCAGAGGGTTTGTTGGGAGGTGCAGAGGCTaGGACACAAAGCAGACCAAAGGAGCAGGTTGGGGC | + |
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Preference number: 3 (lower is better) Translates to: VLCRGFVGRCRG*DTKQTKGAGWG Trigger: GCCCCAACCTGCTCCTTTGGTCTGCTTTGTGTCTCAGCCTCTGCACCTCCCAACAAACCCTCTGCAAAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153991.2 ENSMUST00000162294.2 |
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| 3UTR TCA 72 bp | ACAAAGCAGACCAAAGGAGCAGGTTGGGGCGAGGCTTaGATCCTGAGCTTTGAGGCTTCTGGCTGTGTAAGC | + |
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Preference number: 3 (lower is better) Translates to: TKQTKGAGWGEA*ILSFEASGCVS Trigger: GCTTACACAGCCAGAAGCCTCAAAGCTCAGGATTCAAGCCTCGCCCCAACCTGCTCCTTTGGTCTGCTTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153991.2 ENSMUST00000162294.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAGTAAAGACATTGACCGGTGCAGCCCACAGCTCTTCCACTCGTTCTTTGCAGACCAAAGGAGCAGGTaGGGGCGAGGCTTGAATCCT | + |
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Preference number: 3 (lower is better) Translates to: RSKDIDRCSPQLFHSFFADQRSR*GRGLNP Trigger: AGGATTCAAGCCTCGCCCCAACCTGCTCCTTTGGTC...TGCAAAGAACGAGTGGAAGAGCTGTGGGCTGCACCGGTCAATGTCTTTACTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153991.2 ENSMUST00000162294.2 |
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| 3UTR-3UTR CAA 90 bp | AGTTTGACATGTGCTCTAGAAGTAAAGACATTGACCGGTGCAGCCCACAGCTCTTTTGCAGAGGGTTTGTaGGGAGGTGCAGAGGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: SLTCALEVKTLTGAAHSSFAEGL*GGAEAE Trigger: CTCAGCCTCTGCACCTCCCAACAAACCCTCTGCAAA...AGAGCTGTGGGCTGCACCGGTCAATGTCTTTACTTCTAGAGCACATGTCAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153991.2 ENSMUST00000162294.2 |
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| 3UTR GCA 72 bp | TTTGACATGTGCTCTAGAAGTAAAGACATTGACCGGTaGAGCCCACAGCTCTTCCACTCGTTCTTTGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: FDMCSRSKDIDR*SPQLFHSFFAE Trigger: CTCTGCAAAGAACGAGTGGAAGAGCTGTGGGCTGCACCGGTCAATGTCTTTACTTCTAGAGCACATGTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153991.2 ENSMUST00000162294.2 |
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| 3UTR CCA 72 bp | GAGGAAGCATTAGGTTTATTTCTTGAACTGAACTCCTaGGGAGAAGATGGGTGGTGCCACCATATGCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: EEALGLFLELNS*GEDGWCHHMPS Trigger: AGAGGGCATATGGTGGCACCACCCATCTTCTCCCCAGGAGTTCAGTTCAAGAAATAAACCTAATGCTTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098480.9 ENSMUST00000161029.9 |
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| 3UTR GCA 72 bp | GCCACTTTTGATGTTAAATACAGTGAGTTTGACATGTaGTCTAGAAGTAAAGACATTGACCGGTGCAGCCCA | + |
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Preference number: 3 (lower is better) Translates to: ATFDVKYSEFDM*SRSKDIDRCSP Trigger: TGGGCTGCACCGGTCAATGTCTTTACTTCTAGAGCACATGTCAAACTCACTGTATTTAACATCAAAAGTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153991.2 ENSMUST00000162294.2 |
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| CDS-3UTR TCA 90 bp | CTCTGTCCGGCTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGAATCAGCCTTCGATGGCACGCGTaGAGCAGGGCCAGTCGACCC | + |
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Preference number: 4 (lower is better) Translates to: LCPARGPEVARSSHRRISLRWHA*SRASRP Trigger: GGGTCGACTGGCCCTGCTTCACGCGTGCCATCGAAG...GCTGATTCTTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAGCCGGACAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098480.9 ENSMUST00000161029.9 ENSMUST00000212056.2 |
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| CDS-3UTR TCA 90 bp | CATATGCCCTCTGTCCGGCTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAACTTCGATGGCACGCGTaGAGCAGGGCCAGTCGACCC | + |
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Preference number: 4 (lower is better) Translates to: HMPSVRLGALRWHGPAIELRWHA*SRASRP Trigger: GGGTCGACTGGCCCTGCTTCACGCGTGCCATCGAAG...TTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAGCCGGACAGAGGGCATATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098480.9 ENSMUST00000161029.9 ENSMUST00000212056.2 |
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| CDS-3UTR TCA 90 bp | GTCCGGCTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGAATCAGCCTTTGCCAGTCGACCCGGTTaGTGCCTGGCGCGATGGGAA | + |
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Preference number: 4 (lower is better) Translates to: VRLGALRWHGPAIEESAFASRPG*CLARWE Trigger: TTCCCATCGCGCCAGGCATCAACCGGGTCGACTGGC...AAAGGCTGATTCTTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAGCCGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098480.9 ENSMUST00000161029.9 ENSMUST00000212056.2 |
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| CDS-3UTR TCA 90 bp | CCGGCTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGAATCAGCCTTTTCGCCAGTCGACCCGGTTaGTGCCTGGCGCGATGGGAA | + |
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Preference number: 4 (lower is better) Translates to: PARGPEVARSSHRRISLFASRPG*CLARWE Trigger: TTCCCATCGCGCCAGGCATCAACCGGGTCGACTGGC...GAAAAGGCTGATTCTTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAGCCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098480.9 ENSMUST00000161029.9 ENSMUST00000212056.2 |
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| CDS-3UTR TCA 90 bp | TATGCCCTCTGTCCGGCTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGACCGCCACGATACTTGTaGCAGAGCAGTGGGTGGCGC | + |
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Preference number: 4 (lower is better) Translates to: YALCPARGPEVARSSHRRPPRYL*QSSGWR Trigger: GCGCCACCCACTGCTCTGTCACAAGTATCGTGGCGG...TCTTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAGCCGGACAGAGGGCATA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212056.2 |
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| CDS-3UTR TCA 90 bp | GCCCTCTGTCCGGCTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGAATCTCTGGCCGGTTGCTGTaGAATCCAGGCATTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: ALCPARGPEVARSSHRRISGRLL*NPGIAG Trigger: CCCTGCAATGCCTGGATTTCACAGCAACCGGCCAGA...GATTCTTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAGCCGGACAGAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161029.9 |
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| CDS-3UTR CCA 90 bp | TATGCCCTCTGTCCGGCTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGATCCAGGCTGGGGTTCTaGTTGAGGCAGTACCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: YALCPARGPEVARSSHRRSRLGF*LRQYRQ Trigger: CTGGCGGTACTGCCTCAACCAGAACCCCAGCCTGGA...TCTTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAGCCGGACAGAGGGCATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098480.9 ENSMUST00000161029.9 ENSMUST00000212056.2 |
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| CDS-3UTR CCA 90 bp | CTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGAATCAGCCTTTTCCCCCTCCAGGCTGGGGTTCTaGTTGAGGCAGTACCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LGALRWHGPAIEESAFSPSRLGF*LRQYRQ Trigger: CTGGCGGTACTGCCTCAACCAGAACCCCAGCCTGGA...GGGGGAAAAGGCTGATTCTTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000098480.9 ENSMUST00000161029.9 ENSMUST00000212056.2 |
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| CDS-3UTR CCA 90 bp | GCTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGAATCAGCCTTTTCCCCTCCAGGCTGGGGTTCTaGTTGAGGCAGTACCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: ARGPEVARSSHRRISLFPSRLGF*LRQYRQ Trigger: CTGGCGGTACTGCCTCAACCAGAACCCCAGCCTGGA...GGGGAAAAGGCTGATTCTTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000098480.9 ENSMUST00000161029.9 ENSMUST00000212056.2 |
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| CDS-3UTR TCA 90 bp | TATGCCCTCTGTCCGGCTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGACGGAGAGGCAACCCTTaGCAGTGTCCATATCCATGC | + |
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Preference number: 4 (lower is better) Translates to: YALCPARGPEVARSSHRRRRGNP*QCPYPC Trigger: GCATGGATATGGACACTGTCAAGGGTTGCCTCTCCG...TCTTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAGCCGGACAGAGGGCATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161029.9 |
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| CDS-3UTR CCA 90 bp | ATGCCCTCTGTCCGGCTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGAAGACCCGGTTGATGCCTaGCGCGATGGGAATCATCTT | + |
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Preference number: 4 (lower is better) Translates to: MPSVRLGALRWHGPAIEEDPVDA*RDGNHL Trigger: AAGATGATTCCCATCGCGCCAGGCATCAACCGGGTC...TTCTTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAGCCGGACAGAGGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161029.9 ENSMUST00000212056.2 |
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| CDS-3UTR GCA 90 bp | CTCTGTCCGGCTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGAATCAGCGTGAAATCCAGGCATTaGAGGGGTTTGTTGGGGACC | + |
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Preference number: 4 (lower is better) Translates to: LCPARGPEVARSSHRRISVKSRH*RGLLGT Trigger: GGTCCCCAACAAACCCCTGCAATGCCTGGATTTCAC...GCTGATTCTTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAGCCGGACAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161029.9 |
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| CDS-3UTR CCA 90 bp | CTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGAATCAGCCTTTTCCCCCGACCCGGTTGATGCCTaGCGCGATGGGAATCATCTT | + |
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Preference number: 4 (lower is better) Translates to: LGALRWHGPAIEESAFSPDPVDA*RDGNHL Trigger: AAGATGATTCCCATCGCGCCAGGCATCAACCGGGTC...GGGGGAAAAGGCTGATTCTTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000161029.9 ENSMUST00000212056.2 |
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| CDS-3UTR TCA 90 bp | GGTTTATTTCTTGAACTGAACTCCTGGGGAGAAGATGGGTGGTGCCACCATATGGCCAGTCGACCCGGTTaGTGCCTGGCGCGATGGGAA | + |
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Preference number: 4 (lower is better) Translates to: GLFLELNSWGEDGWCHHMASRPG*CLARWE Trigger: TTCCCATCGCGCCAGGCATCAACCGGGTCGACTGGC...CATATGGTGGCACCACCCATCTTCTCCCCAGGAGTTCAGTTCAAGAAATAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098480.9 ENSMUST00000161029.9 |
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| CDS-3UTR CCA 90 bp | CCCTCTGTCCGGCTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGAATCACTTTGGAGAAGTAGGTaGAAGACTGGCAGTGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: PSVRLGALRWHGPAIEESLWRSR*KTGSVH Trigger: ATGAACACTGCCAGTCTTCCACCTACTTCTCCAAAG...TGATTCTTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAGCCGGACAGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161029.9 |
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| CDS-3UTR CCA 90 bp | CTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGAATCAGCCTTTTCCCCCCCTAGGAGTGTGAAGTaGGCCTTGTTGAAATCATCT | + |
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Preference number: 4 (lower is better) Translates to: LGALRWHGPAIEESAFSPPRSVK*ALLKSS Trigger: AGATGATTTCAACAAGGCCCACTTCACACTCCTAGG...GGGGGAAAAGGCTGATTCTTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAG 54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000161029.9 |
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| 3UTR CAA 72 bp | AGCCCACAGCTCTTCCACTCGTTCTTTGCAGAGGGTTaGTTGGGAGGTGCAGAGGCTGAGACACAAAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SPQLFHSFFAEG*LGGAEAETQSR Trigger: TCTGCTTTGTGTCTCAGCCTCTGCACCTCCCAACAAACCCTCTGCAAAGAACGAGTGGAAGAGCTGTGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000153991.2 ENSMUST00000162294.2 |
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| CDS-3UTR CCA 90 bp | AGTTTGACATGTGCTCTAGAAGTAAAGACATTGACCGGTGCAGCCCACAGCTCTTCCAGGCTGGGGTTCTaGTTGAGGCAGTACCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SLTCALEVKTLTGAAHSSSRLGF*LRQYRQ Trigger: CTGGCGGTACTGCCTCAACCAGAACCCCAGCCTGGA...AGAGCTGTGGGCTGCACCGGTCAATGTCTTTACTTCTAGAGCACATGTCAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000153991.2 ENSMUST00000162294.2 |
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| CDS-3UTR CCA 90 bp | TCTAGAAGTAAAGACATTGACCGGTGCAGCCCACAGCTCTTCCACTCGTTCTTTTCCAGGCTGGGGTTCTaGTTGAGGCAGTACCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SRSKDIDRCSPQLFHSFFSRLGF*LRQYRQ Trigger: CTGGCGGTACTGCCTCAACCAGAACCCCAGCCTGGA...AAAGAACGAGTGGAAGAGCTGTGGGCTGCACCGGTCAATGTCTTTACTTCTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000153991.2 ENSMUST00000162294.2 |
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| CDS CCA 90 bp | GGAAGGCAAGGCCGGGTGGTAGAGCTGGTGCTTCACACCGGCCAGTaGGTGGCGCACTCGCTCCAGGGGGAGGAGGACCGCTGGGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: GRQGRVVELVLHTGQ*VAHSLQGEEDRWGS Trigger: GCTTCCCCAGCGGTCCTCCTCCCCCTGGAGCGAGTGCGCCACCCACTGGCCGGTGTGAAGCACCAGCTCTACCACCCGGCCTTGCCTTCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000135142.8 ENSMUST00000161029.9 ENSMUST00000162555.2 |
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| CDS-3UTR CAA 90 bp | ATGCCCTCTGTCCGGCTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGAAGGCCAGTCGACCCGGTaGATGCCTGGCGCGATGGGA | + |
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Preference number: 5 (lower is better) Translates to: MPSVRLGALRWHGPAIEEGQSTR*MPGAMG Trigger: TCCCATCGCGCCAGGCATCAACCGGGTCGACTGGCC...TTCTTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAGCCGGACAGAGGGCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098480.9 ENSMUST00000161029.9 ENSMUST00000212056.2 |
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| CDS-3UTR CAA 90 bp | CATATGCCCTCTGTCCGGCTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGGCCAGTCGACCCGGTaGATGCCTGGCGCGATGGGA | + |
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Preference number: 5 (lower is better) Translates to: HMPSVRLGALRWHGPAIEGQSTR*MPGAMG Trigger: TCCCATCGCGCCAGGCATCAACCGGGTCGACTGGCC...TTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAGCCGGACAGAGGGCATATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098480.9 ENSMUST00000161029.9 ENSMUST00000212056.2 |
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| CDS CCA 90 bp | CGCACTCGCTCCAGGGGGAGGAGGACCGCTGGGGAAGCATACAAGTaGGCGGAGCATTCGTCCCAGGGCACCAGGTCTATGATTTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: RTRSRGRRTAGEAYK*AEHSSQGTRSMIWA Trigger: GGCCCAAATCATAGACCTGGTGCCCTGGGACGAATGCTCCGCCCACTTGTATGCTTCCCCAGCGGTCCTCCTCCCCCTGGAGCGAGTGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000135142.8 ENSMUST00000161029.9 ENSMUST00000162555.2 ENSMUST00000212056.2 |
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| CDS-3UTR CAA 90 bp | GTCCGGCTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGAATCAGCCTTTGGCCAGTCGACCCGGTaGATGCCTGGCGCGATGGGA | + |
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Preference number: 5 (lower is better) Translates to: VRLGALRWHGPAIEESAFGQSTR*MPGAMG Trigger: TCCCATCGCGCCAGGCATCAACCGGGTCGACTGGCC...AAAGGCTGATTCTTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAGCCGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000098480.9 ENSMUST00000161029.9 ENSMUST00000212056.2 |
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| CDS TCA 90 bp | TTGATGCCTGGCGCGATGGGAATCATCTTGCCGCCACGATACTTGTaGCAGAGCAGTGGGTGGCGCACTCGCTCCAGGGGGAGGAGGACC | + |
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Preference number: 5 (lower is better) Translates to: LMPGAMGIILPPRYL*QSSGWRTRSRGRRT Trigger: GGTCCTCCTCCCCCTGGAGCGAGTGCGCCACCCACTGCTCTGTCACAAGTATCGTGGCGGCAAGATGATTCCCATCGCGCCAGGCATCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212056.2 |
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| CDS TCA 90 bp | GAACTAGCCAAGGGCTCCTTGTCCTGTAGTGGGAGCCAAAGCGCCTaGACGCGTTCAGCGAGTCGAAAGGCAGGGGCTTCTGTCCGTAGC | + |
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Preference number: 5 (lower is better) Translates to: ELAKGSLSCSGSQSA*TRSASRKAGASVRS Trigger: GCTACGGACAGAAGCCCCTGCCTTTCGACTCGCTGAACGCGTTCAGGCGCTTTGGCTCCCACTACAGGACAAGGAGCCCTTGGCTAGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162294.2 |
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| CDS CCA 90 bp | TTCGATGGCACGCGTGAAGCAGGGCCAGTCGACCCGGTTGATGCCTaGCGCGATGGGAATCATCTTGCCGCCACGATACTTGTGACAGAG | + |
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Preference number: 5 (lower is better) Translates to: FDGTREAGPVDPVDA*RDGNHLAATILVTE Trigger: CTCTGTCACAAGTATCGTGGCGGCAAGATGATTCCCATCGCGCCAGGCATCAACCGGGTCGACTGGCCCTGCTTCACGCGTGCCATCGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135142.8 ENSMUST00000161029.9 ENSMUST00000212056.2 |
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| CDS-3UTR CAA 90 bp | TATGCCCTCTGTCCGGCTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGACCCTCCACCCTTTTGTaGGCACAAGGCAGCTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: YALCPARGPEVARSSHRRPSTLL*AQGSLN Trigger: GTTCAAGCTGCCTTGTGCCAACAAAAGGGTGGAGGG...TCTTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAGCCGGACAGAGGGCATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000098480.9 ENSMUST00000161029.9 ENSMUST00000212056.2 |
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| CDS-3UTR CAA 90 bp | CCGGCTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGAATCAGCCTTTTCCCCTCCACCCTTTTGTaGGCACAAGGCAGCTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: PARGPEVARSSHRRISLFPSTLL*AQGSLN Trigger: GTTCAAGCTGCCTTGTGCCAACAAAAGGGTGGAGGG...GAAAAGGCTGATTCTTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAGCCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000098480.9 ENSMUST00000161029.9 ENSMUST00000212056.2 |
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| CDS-3UTR CAA 90 bp | ATGCCCTCTGTCCGGCTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGAATGTGAAATCCAGGCATaGCAGGGGTTTGTTGGGGAC | + |
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Preference number: 5 (lower is better) Translates to: MPSVRLGALRWHGPAIEECEIQA*QGFVGD Trigger: GTCCCCAACAAACCCCTGCAATGCCTGGATTTCACA...TTCTTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAGCCGGACAGAGGGCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161029.9 |
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| CDS CCA 90 bp | AGCTGCAGCTCACAAGCCTCCATTTCCCAAAGGCCAGAGTCGGGCTaGAGAGAACTAGCCAAGGGCTCCTTGTCAGCGAGTCGAAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: SCSSQASISQRPESG*RELAKGSLSASRKA Trigger: TGCCTTTCGACTCGCTGACAAGGAGCCCTTGGCTAGTTCTCTCCAGCCCGACTCTGGCCTTTGGGAAATGGAGGCTTGTGAGCTGCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153991.2 |
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| CDS CCA 90 bp | AGCTGCAGCTCACAAGCCTCCATTTCCCAAAGGCCAGAGTCGGGCTaGAGAGAACTAGCCAAGGGCTCCTTGTCCTGTAGTGGGAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: SCSSQASISQRPESG*RELAKGSLSCSGSQ Trigger: TTGGCTCCCACTACAGGACAAGGAGCCCTTGGCTAGTTCTCTCCAGCCCGACTCTGGCCTTTGGGAAATGGAGGCTTGTGAGCTGCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162294.2 |
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| CDS TCA 90 bp | AGAAGTAGGTGGAAGACTGGCAGTGTTCATCGGAGAGGCAACCCTTaGCAGTGTCCATATCCATGCGCCGAAGGGAAGGCAAGGCCGGGT | + |
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Preference number: 5 (lower is better) Translates to: RSRWKTGSVHRRGNP*QCPYPCAEGKARPG Trigger: ACCCGGCCTTGCCTTCCCTTCGGCGCATGGATATGGACACTGTCAAGGGTTGCCTCTCCGATGAACACTGCCAGTCTTCCACCTACTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135142.8 ENSMUST00000161029.9 |
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| CDS TCA 90 bp | TTGATGCCTGGCGCGATGGGAATCATCTTGCCGCCACGATACTTGTaGCAGAGCTTCTGGCCGGTTGCTGTGAAATCCAGGCATTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: LMPGAMGIILPPRYL*QSFWPVAVKSRHCR Trigger: CCTGCAATGCCTGGATTTCACAGCAACCGGCCAGAAGCTCTGTCACAAGTATCGTGGCGGCAAGATGATTCCCATCGCGCCAGGCATCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135142.8 ENSMUST00000161029.9 |
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| CDS-3UTR CAA 90 bp | CGGCTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGAATCAGCCTTTTCCGTGAAGTGGGCCTTGTaGAAATCATCTTTGGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: RLGALRWHGPAIEESAFSVKWAL*KSSLEK Trigger: CTTCTCCAAAGATGATTTCAACAAGGCCCACTTCAC...GGAAAAGGCTGATTCTTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161029.9 |
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| CDS-3UTR CAA 90 bp | CTAGGGGCCCTGAGGTGGCACGGTCCAGCCATAGAAGAATCAGCCTTTTCCCCCAGTGTGAAGTGGGCCTaGTTGAAATCATCTTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: LGALRWHGPAIEESAFSPSVKWA*LKSSLE Trigger: CTCCAAAGATGATTTCAACAAGGCCCACTTCACACT...GGGGGAAAAGGCTGATTCTTCTATGGCTGGACCGTGCCACCTCAGGGCCCCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161029.9 |
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| CDS-3UTR CAA 90 bp | AGGCAGCCACTTTTGATGTTAAATACAGTGAGTTTGACATGTGCTCTAGAAGTACTAGCCAAGGGCTCCTaGTCCTGTAGTGGGAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: RQPLLMLNTVSLTCALEVLAKGS*SCSGSQ Trigger: TTGGCTCCCACTACAGGACAAGGAGCCCTTGGCTAG...TACTTCTAGAGCACATGTCAAACTCACTGTATTTAACATCAAAAGTGGCTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162294.2 |
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| CDS TCA 72 bp | GCTTCTGTCCGTAGCGGTCCAGGCTGGGGTTCTGGTTaGGGCAGTACCGCCAGTTCTGGGTCACCTCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: ASVRSGPGWGSG*GSTASSGSPPA Trigger: AGCCGGAGGTGACCCAGAACTGGCGGTACTGCCTCAACCAGAACCCCAGCCTGGACCGCTACGGACAGAAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000098480.9 ENSMUST00000153991.2 ENSMUST00000161029.9 ENSMUST00000162294.2 ENSMUST00000212056.2 |
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| CDS TCA 72 bp | GGCGCGATGGGAATCATCTTGCCGCCACGATACTTGTaGCAGAGCAGTGGGTGGCGCACTCGCTCCAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: GAMGIILPPRYL*QSSGWRTRSRG Trigger: CCCCCTGGAGCGAGTGCGCCACCCACTGCTCTGTCACAAGTATCGTGGCGGCAAGATGATTCCCATCGCGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212056.2 |
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| CDS CCA 72 bp | TCCAGGGGGAGGAGGACCGCTGGGGAAGCATACAAGTaGGCGGAGCATTCGTCCCAGGGCACCAGGTCTATG | + |
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Preference number: 6 (lower is better) Translates to: SRGRRTAGEAYK*AEHSSQGTRSM Trigger: CATAGACCTGGTGCCCTGGGACGAATGCTCCGCCCACTTGTATGCTTCCCCAGCGGTCCTCCTCCCCCTGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000135142.8 ENSMUST00000161029.9 ENSMUST00000162555.2 ENSMUST00000212056.2 |
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| CDS CAA 72 bp | TCGATGGCACGCGTGAAGCAGGGCCAGTCGACCCGGTaGATGCCTGGCGCGATGGGAATCATCTTGCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: SMARVKQGQSTR*MPGAMGIILPP Trigger: TGGCGGCAAGATGATTCCCATCGCGCCAGGCATCAACCGGGTCGACTGGCCCTGCTTCACGCGTGCCATCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135142.8 ENSMUST00000161029.9 ENSMUST00000212056.2 |
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| CDS CAA 90 bp | TCCCAAAGGCCAGAGTCGGGCTGGAGAGAACTAGCCAAGGGCTCCTaGTCAGCGAGTCGAAAGGCAGGGGCTTCTGTCCGTAGCGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: SQRPESGWRELAKGS*SASRKAGASVRSGP Trigger: TGGACCGCTACGGACAGAAGCCCCTGCCTTTCGACTCGCTGACAAGGAGCCCTTGGCTAGTTCTCTCCAGCCCGACTCTGGCCTTTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153991.2 |
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| CDS CCA 72 bp | ACGCGTGAAGCAGGGCCAGTCGACCCGGTTGATGCCTaGCGCGATGGGAATCATCTTGCCGCCACGATACTT | + |
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Preference number: 6 (lower is better) Translates to: TREAGPVDPVDA*RDGNHLAATIL Trigger: AAGTATCGTGGCGGCAAGATGATTCCCATCGCGCCAGGCATCAACCGGGTCGACTGGCCCTGCTTCACGCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135142.8 ENSMUST00000161029.9 ENSMUST00000212056.2 |
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| CDS CAA 90 bp | GACCAATCTTCGATGGCACGCGTGAAGCAGGGCCAGTCGACCCGGTaGATGCCTGGCGCGATGGGAATCATCTTGCCGCCACGATACTTG | + |
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Preference number: 6 (lower is better) Translates to: DQSSMARVKQGQSTR*MPGAMGIILPPRYL Trigger: CAAGTATCGTGGCGGCAAGATGATTCCCATCGCGCCAGGCATCAACCGGGTCGACTGGCCCTGCTTCACGCGTGCCATCGAAGATTGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135142.8 ENSMUST00000161029.9 ENSMUST00000212056.2 |
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| CDS TCA 72 bp | TCACCTCCGGCTTCAAGTACCGCACCGCGTAGCCACTaGAACCCTCCACTGTGGAGAGAGCCCACTTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: SPPASSTAPRSH*NPPLWREPTLG Trigger: TCCCAAAGTGGGCTCTCTCCACAGTGGAGGGTTTCAGTGGCTACGCGGTGCGGTACTTGAAGCCGGAGGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153991.2 |
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| CDS TCA 72 bp | AAGGGCTCCTTGTCCTGTAGTGGGAGCCAAAGCGCCTaGACGCGTTCAGCGAGTCGAAAGGCAGGGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: KGSLSCSGSQSA*TRSASRKAGAS Trigger: AGAAGCCCCTGCCTTTCGACTCGCTGAACGCGTTCAGGCGCTTTGGCTCCCACTACAGGACAAGGAGCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162294.2 |
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| CDS TCA 72 bp | TCACCTCCGGCTTCAAGTACCGCACCGCGTAGCCACTaGAACCCTCCACCCTTTTGTTGGCACAAGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SPPASSTAPRSH*NPPPFCWHKAA Trigger: AGCTGCCTTGTGCCAACAAAAGGGTGGAGGGTTTCAGTGGCTACGCGGTGCGGTACTTGAAGCCGGAGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000098480.9 ENSMUST00000135142.8 ENSMUST00000161029.9 ENSMUST00000212056.2 |
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| CDS TCA 72 bp | GGCGCGATGGGAATCATCTTGCCGCCACGATACTTGTaGCAGAGCTTCTGGCCGGTTGCTGTGAAATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GAMGIILPPRYL*QSFWPVAVKSR Trigger: CCTGGATTTCACAGCAACCGGCCAGAAGCTCTGTCACAAGTATCGTGGCGGCAAGATGATTCCCATCGCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135142.8 ENSMUST00000161029.9 |
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| CDS CAA 72 bp | GTGGAAGACTGGCAGTGTTCATCGGAGAGGCAACCCTaGACAGTGTCCATATCCATGCGCCGAAGGGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: VEDWQCSSERQP*TVSISMRRREG Trigger: GCCTTCCCTTCGGCGCATGGATATGGACACTGTCAAGGGTTGCCTCTCCGATGAACACTGCCAGTCTTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135142.8 ENSMUST00000161029.9 |
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| CDS TCA 72 bp | TGGAAGACTGGCAGTGTTCATCGGAGAGGCAACCCTTaGCAGTGTCCATATCCATGCGCCGAAGGGAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: WKTGSVHRRGNP*QCPYPCAEGKA Trigger: TGCCTTCCCTTCGGCGCATGGATATGGACACTGTCAAGGGTTGCCTCTCCGATGAACACTGCCAGTCTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135142.8 ENSMUST00000161029.9 |
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| CDS TCA 72 bp | CACGATACTTGTGACAGAGCTTCTGGCCGGTTGCTGTaGAATCCAGGCATTGCAGGGGTTTGTTGGGGACCC | + |
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Preference number: 6 (lower is better) Translates to: HDTCDRASGRLL*NPGIAGVCWGP Trigger: GGGTCCCCAACAAACCCCTGCAATGCCTGGATTTCACAGCAACCGGCCAGAAGCTCTGTCACAAGTATCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135142.8 ENSMUST00000161029.9 |
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| CDS CCA 72 bp | TCACAAGCCTCCATTTCCCAAAGGCCAGAGTCGGGCTaGAGAGAACTAGCCAAGGGCTCCTTGTCCTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: SQASISQRPESG*RELAKGSLSCS Trigger: ACTACAGGACAAGGAGCCCTTGGCTAGTTCTCTCCAGCCCGACTCTGGCCTTTGGGAAATGGAGGCTTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162294.2 |
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