RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TEP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000006281

Ensembl transcript IDs: ENSMUST00000006444.9, ENSMUST00000226222.2, ENSMUST00000226430.2, ENSMUST00000227526.2

Found 562 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGGCTGTCCCCCTGGGCGGGGCTCCAGAGCAGCTGCACACTGGCTaGTGGGTCCGGAATGGGCAGGGATGCTGGTCAGCTCCACACCCT +
Preference number: 1 (lower is better)
Translates to: QAVPLGGAPEQLHTG*WVRNGQGCWSAPHP
Trigger: AGGGTGTGGAGCTGACCAGCATCCCTGCCCATTCCGGACCCATCAGCCAGTGTGCAGCTGCTCTGGAGCCCCGCCCAGGGGGACAGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
3UTR GCA 90 bp ACACAGCCACACTGTGCAGGGAAGGCCGCCAGCCGGGCACCCTCTTaGCAGGCCCACAGCTCCACTGTCCCATCTATCCGGCCCACAGCC +
Preference number: 1 (lower is better)
Translates to: TQPHCAGKAASRAPS*QAHSSTVPSIRPTA
Trigger: GGCTGTGGGCCGGATAGATGGGACAGTGGAGCTGTGGGCCTGGCAAGAGGGTGCCCGGCTGGCGGCCTTCCCTGCACAGTGTGGCTGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 90 bp GATCCAGGCTGTCCCCCTGGGCGGGGCTCCAGAGCAGCTGCACACTaGCTGATGGGTCCGGAATGGGCAGGGATGCTGGTCAGCTCCACA +
Preference number: 1 (lower is better)
Translates to: DPGCPPGRGSRAAAH*LMGPEWAGMLVSST
Trigger: TGTGGAGCTGACCAGCATCCCTGCCCATTCCGGACCCATCAGCCAGTGTGCAGCTGCTCTGGAGCCCCGCCCAGGGGGACAGCCTGGATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
3UTR GCA 90 bp ACGGCGCTCACGGCACTCTGGTGGCCTGAGAACTGGCCAAGTTGCTaGCCTGCCTCTGGGTTCCAGAGTCCCACAGAGCCATCACTCGAG +
Preference number: 1 (lower is better)
Translates to: TALTALWWPENWPSC*PASGFQSPTEPSLE
Trigger: CTCGAGTGATGGCTCTGTGGGACTCTGGAACCCAGAGGCAGGGCAGCAACTTGGCCAGTTCTCAGGCCACCAGAGTGCCGTGAGCGCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
3UTR GCA 90 bp ACCACGGCGCTCACGGCACTCTGGTGGCCTGAGAACTGGCCAAGTTaGTGCCCTGCCTCTGGGTTCCAGAGTCCCACAGAGCCATCACTC +
Preference number: 1 (lower is better)
Translates to: TTALTALWWPENWPS*CPASGFQSPTEPSL
Trigger: GAGTGATGGCTCTGTGGGACTCTGGAACCCAGAGGCAGGGCAGCAACTTGGCCAGTTCTCAGGCCACCAGAGTGCCGTGAGCGCCGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
3UTR CCA 90 bp TCCACAGCAACCACGGCGCTCACGGCACTCTGGTGGCCTGAGAACTaGCCAAGTTGCTGCCCTGCCTCTGGGTTCCAGAGTCCCACAGAG +
Preference number: 1 (lower is better)
Translates to: STATTALTALWWPEN*PSCCPASGFQSPTE
Trigger: CTCTGTGGGACTCTGGAACCCAGAGGCAGGGCAGCAACTTGGCCAGTTCTCAGGCCACCAGAGTGCCGTGAGCGCCGTGGTTGCTGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
3UTR TCA 90 bp GATTCCGATCCCTGCCAGCTGTGGCCAAGATGCCTCCATCAGGGCTaGAGCTACAGCAGCACACTGGCCCCTCGTGTCCCCGGAGTTCAG +
Preference number: 1 (lower is better)
Translates to: DSDPCQLWPRCLHQG*SYSSTLAPRVPGVQ
Trigger: CTGAACTCCGGGGACACGAGGGGCCAGTGTGCTGCTGTAGCTTCAGCCCTGATGGAGGCATCTTGGCCACAGCTGGCAGGGATCGGAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR GCA 90 bp CTGACGCGGCCTGGAGCCTGTGCGGTAGCCACAGCCTTGGCTTGCTaGCACAGTGTCAGTTCCCCGGCTTCATTTCCGGACACCACCATA +
Preference number: 1 (lower is better)
Translates to: LTRPGACAVATALAC*HSVSSPASFPDTTI
Trigger: TATGGTGGTGTCCGGAAATGAAGCCGGGGAACTGACACTGTGGCAGCAAGCCAAGGCTGTGGCTACCGCACAGGCTCCAGGCCGCGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 90 bp GGTCCGGGGGCCCCTAGTTCCTTGGTGACTTTGAGTCCATCTGCCTaGAAGAAGGTAATGCTGCCAGCCCAGCTGCCTGTGGCTACCACC +
Preference number: 1 (lower is better)
Translates to: GPGAPSSLVTLSPSA*KKVMLPAQLPVATT
Trigger: GGTGGTAGCCACAGGCAGCTGGGCTGGCAGCATTACCTTCTTCCAGGCAGATGGACTCAAAGTCACCAAGGAACTAGGGGCCCCCGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 90 bp GAGCCCAGGCAACCCCTGGGCCGGCCAAGAAATCCTGACCATAACTaGGCCTTGCCATCTTCTCCAGCAGTCAGGAACCGGTCTCCAGCA +
Preference number: 1 (lower is better)
Translates to: EPRQPLGRPRNPDHN*ALPSSPAVRNRSPA
Trigger: TGCTGGAGACCGGTTCCTGACTGCTGGAGAAGATGGCAAGGCTCAGTTATGGTCAGGATTTCTTGGCCGGCCCAGGGGTTGCCTGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 90 bp GGTAATGCTGCCAGCCCAGCTGCCTGTGGCTACCACCTGCCCCTCTaGGTGGAAGGCAACGCAGTTGAGAGACTTTGGATGGGTGTACTG +
Preference number: 1 (lower is better)
Translates to: GNAASPAACGYHLPL*VEGNAVERLWMGVL
Trigger: CAGTACACCCATCCAAAGTCTCTCAACTGCGTTGCCTTCCACCCAGAGGGGCAGGTGGTAGCCACAGGCAGCTGGGCTGGCAGCATTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 90 bp TGTGGCCAAGATGCCTCCATCAGGGCTGAAGCTACAGCAGCACACTaGCCCCTCGTGTCCCCGGAGTTCAGCACAACAGGGCAACTCTAC +
Preference number: 1 (lower is better)
Translates to: CGQDASIRAEATAAH*PLVSPEFSTTGQLY
Trigger: GTAGAGTTGCCCTGTTGTGCTGAACTCCGGGGACACGAGGGGCCAGTGTGCTGCTGTAGCTTCAGCCCTGATGGAGGCATCTTGGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 90 bp CACCACATAAGCACCCTGACTTTGCTGAAGGGTCTCACCCAGGCCTaGGTCACTGGACACACTCAGCACCAGGTGTACTCGCCGCGGAAG +
Preference number: 1 (lower is better)
Translates to: HHISTLTLLKGLTQA*VTGHTQHQVYSPRK
Trigger: CTTCCGCGGCGAGTACACCTGGTGCTGAGTGTGTCCAGTGACTCAGGCCTGGGTGAGACCCTTCAGCAAAGTCAGGGTGCTTATGTGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR GCA 90 bp TGGAAGAAGGTAATGCTGCCAGCCCAGCTGCCTGTGGCTACCACCTaGCCCTCTGGGTGGAAGGCAACGCAGTTGAGAGACTTTGGATGG +
Preference number: 1 (lower is better)
Translates to: WKKVMLPAQLPVATT*PSGWKATQLRDFGW
Trigger: CCATCCAAAGTCTCTCAACTGCGTTGCCTTCCACCCAGAGGGGCAGGTGGTAGCCACAGGCAGCTGGGCTGGCAGCATTACCTTCTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 90 bp CTTCGGAAGGTGCCCGAGGCATCAGGATCACACGTCTTCCAGAGGTaGGCTGCAATGAGGACATGCGCAGTCTTCTCTAGCCCCAGCCTT +
Preference number: 1 (lower is better)
Translates to: LRKVPEASGSHVFQR*AAMRTCAVFSSPSL
Trigger: AAGGCTGGGGCTAGAGAAGACTGCGCATGTCCTCATTGCAGCTCACCTCTGGAAGACGTGTGATCCTGATGCCTCGGGCACCTTCCGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 90 bp CTGATGGGTCCGGAATGGGCAGGGATGCTGGTCAGCTCCACACCCTaGTGGTCCCACACTTTCAAGGTCCCATCTCGGCTCACAGATACA +
Preference number: 1 (lower is better)
Translates to: LMGPEWAGMLVSSTP*WSHTFKVPSRLTDT
Trigger: TGTATCTGTGAGCCGAGATGGGACCTTGAAAGTGTGGGACCATCAGGGTGTGGAGCTGACCAGCATCCCTGCCCATTCCGGACCCATCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
3UTR CCA 90 bp CCACCGAGAGTGCAGGAGAAAGAGGAAGAGAGCCCAGGCAACCCCTaGGCCGGCCAAGAAATCCTGACCATAACTGAGCCTTGCCATCTT +
Preference number: 1 (lower is better)
Translates to: PPRVQEKEEESPGNP*AGQEILTITEPCHL
Trigger: AAGATGGCAAGGCTCAGTTATGGTCAGGATTTCTTGGCCGGCCCAGGGGTTGCCTGGGCTCTCTTCCTCTTTCTCCTGCACTCTCGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 90 bp TCCCCGGAGTTCAGCACAACAGGGCAACTCTACCGCATGCACATGTaGCTGTGTCAGCAGCTGTCTGGGCCACAGTCTCACAGTGAAGTC +
Preference number: 1 (lower is better)
Translates to: SPEFSTTGQLYRMHM*LCQQLSGPQSHSEV
Trigger: GACTTCACTGTGAGACTGTGGCCCAGACAGCTGCTGACACAGCCACATGTGCATGCGGTAGAGTTGCCCTGTTGTGCTGAACTCCGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 90 bp CTGTCCCATCTATCCGGCCCACAGCCACAATCTTCCCAGGTTTGTTaGATGCCAAACTACAGACAGAGGGTCCGGGGGCCCCTAGTTCCT +
Preference number: 1 (lower is better)
Translates to: LSHLSGPQPQSSQVC*MPNYRQRVRGPLVP
Trigger: AGGAACTAGGGGCCCCCGGACCCTCTGTCTGTAGTTTGGCATTCAACAAACCTGGGAAGATTGTGGCTGTGGGCCGGATAGATGGGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 90 bp GCAGCTGCTGTGACTGGGCCACTGTGTCCCTGGAGAGTACGTATTTaGCACACCAACAGGGGATGCCACAACTTTGTGGCCCCATCTAGT +
Preference number: 1 (lower is better)
Translates to: AAAVTGPLCPWRVRI*HTNRGCHNFVAPSS
Trigger: ACTAGATGGGGCCACAAAGTTGTGGCATCCCCTGTTGGTGTGCCAAATACGTACTCTCCAGGGACACAGTGGCCCAGTCACAGCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
3UTR TCA 90 bp CAGCACCAGGTGTACTCGCCGCGGAAGAGACTTGGGGATCCAGTCTaGAATCAGCTGCCCATTACGATCCACCAACTTATCTGCCCCATC +
Preference number: 1 (lower is better)
Translates to: QHQVYSPRKRLGDPV*NQLPITIHQLICPI
Trigger: GATGGGGCAGATAAGTTGGTGGATCGTAATGGGCAGCTGATTTCAGACTGGATCCCCAAGTCTCTTCCGCGGCGAGTACACCTGGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 90 bp AGCTGCTCTTTGCCCATTCGGGGAGAAGGCCACAGCAGTTGGGGATaGGGACATTGTCAGAGACAAGCTTTGCTGACCCTTCAGGGTCTG +
Preference number: 1 (lower is better)
Translates to: SCSLPIRGEGHSSWG*GHCQRQALLTLQGL
Trigger: CAGACCCTGAAGGGTCAGCAAAGCTTGTCTCTGACAATGTCCTCATCCCCAACTGCTGTGGCCTTCTCCCCGAATGGGCAAAGAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 90 bp TTAGCACTGAGAACGAAGAATGAATTTGCCGAGTACCAGATCAGGTaGCTGACGCGGCCTGGAGCCTGTGCGGTAGCCACAGCCTTGGCT +
Preference number: 1 (lower is better)
Translates to: LALRTKNEFAEYQIR*LTRPGACAVATALA
Trigger: AGCCAAGGCTGTGGCTACCGCACAGGCTCCAGGCCGCGTCAGTCACCTGATCTGGTACTCGGCAAATTCATTCTTCGTTCTCAGTGCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR GCA 90 bp GGTAAGGTAAATCTTTCAGAGCCTCAGGAGGGCAACTTCGGAAGGTaGCCGAGGCATCAGGATCACACGTCTTCCAGAGGTGAGCTGCAA +
Preference number: 1 (lower is better)
Translates to: GKVNLSEPQEGNFGR*PRHQDHTSSRGELQ
Trigger: TTGCAGCTCACCTCTGGAAGACGTGTGATCCTGATGCCTCGGGCACCTTCCGAAGTTGCCCTCCTGAGGCTCTGAAAGATTTACCTTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR GCA 90 bp TCCAGACAGCTCACTGGCCCTTCACATCGGAACAAGCCCAGCAGCTaGATACTGGGTCTCTCCCACAGCTTAACATCTCTGTCCTTCGAA +
Preference number: 1 (lower is better)
Translates to: SRQLTGPSHRNKPSS*ILGLSHSLTSLSFE
Trigger: TTCGAAGGACAGAGATGTTAAGCTGTGGGAGAGACCCAGTATGCAGCTGCTGGGCTTGTTCCGATGTGAAGGGCCAGTGAGCTGTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 90 bp TGCTCAGGATTGCATGTAGCTGGTCCACAGTCAGACCACTTCGTGTaGCCTCAAGGGCAGTCAAAGCCTGAGGAAGGACATCATGGCCAT +
Preference number: 1 (lower is better)
Translates to: CSGLHVAGPQSDHFV*PQGQSKPEEGHHGH
Trigger: ATGGCCATGATGTCCTTCCTCAGGCTTTGACTGCCCTTGAGGTCACACGAAGTGGTCTGACTGTGGACCAGCTACATGCAATCCTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 90 bp AGTCCCAGCACAGGCTTCTGGTATCTCGACAACAGCCACAGGGAATaGAGGGAGTCTCCCTTGAACATCCAACCATGCAGGGATCCATCT +
Preference number: 1 (lower is better)
Translates to: SPSTGFWYLDNSHRE*RESPLNIQPCRDPS
Trigger: AGATGGATCCCTGCATGGTTGGATGTTCAAGGGAGACTCCCTTCATTCCCTGTGGCTGTTGTCGAGATACCAGAAGCCTGTGCTGGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 90 bp TCGAGCAGGAGACCAGGATGTTGTCTTTGGTCCACGCACAGCCAGTaGTCCAGTCACGATGACAGGACGAGAAAGTGTGAATCAGGAGAG +
Preference number: 1 (lower is better)
Translates to: SSRRPGCCLWSTHSQ*SSHDDRTRKCESGE
Trigger: CTCTCCTGATTCACACTTTCTCGTCCTGTCATCGTGACTGGATCACTGGCTGTGCGTGGACCAAAGACAACATCCTGGTCTCCTGCTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR GCA 90 bp AAGGGAGTCTCCCTTGAACATCCAACCATGCAGGGATCCATCTTCTaGACCACTCACCAAAACACTAGGGCTCAGCCACACCAGTGCAGA +
Preference number: 1 (lower is better)
Translates to: KGVSLEHPTMQGSIF*TTHQNTRAQPHQCR
Trigger: TCTGCACTGGTGTGGCTGAGCCCTAGTGTTTTGGTGAGTGGTGCAGAAGATGGATCCCTGCATGGTTGGATGTTCAAGGGAGACTCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 90 bp GTCTCCTTGGGCAAGATCAGCCATGTGCTCAGGATTGCATGTAGCTaGTCCACAGTCAGACCACTTCGTGTGACCTCAAGGGCAGTCAAA +
Preference number: 1 (lower is better)
Translates to: VSLGKISHVLRIACS*STVRPLRVTSRAVK
Trigger: TTTGACTGCCCTTGAGGTCACACGAAGTGGTCTGACTGTGGACCAGCTACATGCAATCCTGAGCACATGGCTGATCTTGCCCAAGGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 90 bp AAGAGGTCGGGGACTAGACCCACTTCCAGATATGCAGCAACCACATaGAGATTGGTAAGAAACTCGGCAAGGAGACCATGGTTCCCGCTC +
Preference number: 1 (lower is better)
Translates to: KRSGTRPTSRYAATT*RLVRNSARRPWFPL
Trigger: GAGCGGGAACCATGGTCTCCTTGCCGAGTTTCTTACCAATCTCCATGTGGTTGCTGCATATCTGGAAGTGGGTCTAGTCCCCGACCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 90 bp GGAGAGTACGTATTTGGCACACCAACAGGGGATGCCACAACTTTGTaGCCCCATCTAGTCCAACAGTCACCACCAGAAGCTCTGATCCAG +
Preference number: 1 (lower is better)
Translates to: GEYVFGTPTGDATTL*PHLVQQSPPEALIQ
Trigger: CTGGATCAGAGCTTCTGGTGGTGACTGTTGGACTAGATGGGGCCACAAAGTTGTGGCATCCCCTGTTGGTGTGCCAAATACGTACTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
3UTR TCA 90 bp TCTGGGTGGAAGGCAACGCAGTTGAGAGACTTTGGATGGGTGTACTaGAAAGCCAGCTGTCCTCGGACTGTGTCCCACAGCTTTAGGTAT +
Preference number: 1 (lower is better)
Translates to: SGWKATQLRDFGWVY*KASCPRTVSHSFRY
Trigger: ATACCTAAAGCTGTGGGACACAGTCCGAGGACAGCTGGCTTTTCAGTACACCCATCCAAAGTCTCTCAACTGCGTTGCCTTCCACCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 90 bp CACTTGCCACTCGCTGACGTTTTCATTAGCACTGAGAACGAAGAATaGATTTGCCGAGTACCAGATCAGGTGACTGACGCGGCCTGGAGC +
Preference number: 1 (lower is better)
Translates to: HLPLADVFISTENEE*ICRVPDQVTDAAWS
Trigger: GCTCCAGGCCGCGTCAGTCACCTGATCTGGTACTCGGCAAATTCATTCTTCGTTCTCAGTGCTAATGAAAACGTCAGCGAGTGGCAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR GCA 90 bp TGTACTCGCCGCGGAAGAGACTTGGGGATCCAGTCTGAAATCAGCTaGCCATTACGATCCACCAACTTATCTGCCCCATCGATGATAAGG +
Preference number: 1 (lower is better)
Translates to: CTRRGRDLGIQSEIS*PLRSTNLSAPSMIR
Trigger: CCTTATCATCGATGGGGCAGATAAGTTGGTGGATCGTAATGGGCAGCTGATTTCAGACTGGATCCCCAAGTCTCTTCCGCGGCGAGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 90 bp TACAATGGCAGGCTTGAACCCTGCTTTGCCAGCAGCAGCCGCATCTaGTTGTTAAAAGGTGACTCCTCCAGTCGTTTCCCATACAGTGCT +
Preference number: 1 (lower is better)
Translates to: YNGRLEPCFASSSRI*LLKGDSSSRFPYSA
Trigger: AGCACTGTATGGGAAACGACTGGAGGAGTCACCTTTTAACAACCAGATGCGGCTGCTGCTGGCAAAGCAGGGTTCAAGCCTGCCATTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 90 bp TCAAGACTCCCCAGTCCTCCTGCAGAACTCTCTTCAGATGAAGACTaGAACTGGTGGACGTTGAACCTTTCCTCAGTCCCACTTGCCACT +
Preference number: 1 (lower is better)
Translates to: SRLPSPPAELSSDED*NWWTLNLSSVPLAT
Trigger: AGTGGCAAGTGGGACTGAGGAAAGGTTCAACGTCCACCAGTTCCAGTCTTCATCTGAAGAGAGTTCTGCAGGAGGACTGGGGAGTCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR GCA 90 bp CAAGATAGAAAATACAAGTTTCCTTGTGTGTCTCCCACAGCAAGCTaGAGGGGAGAGCTGGGCTCCATCCAAGGTTCCAGACAGCTCACT +
Preference number: 1 (lower is better)
Translates to: QDRKYKFPCVSPTAS*RGELGSIQGSRQLT
Trigger: AGTGAGCTGTCTGGAACCTTGGATGGAGCCCAGCTCTCCCCTGCAGCTTGCTGTGGGAGACACACAAGGAAACTTGTATTTTCTATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 90 bp TTCATCTCTAGTAATTCCACATCCTCTTTCATCAAGATGAGAGACTaGCCATCAGGGGCCAGACCCAGACCTGTCAAGACTCCCCAGTCC +
Preference number: 1 (lower is better)
Translates to: FISSNSTSSFIKMRD*PSGARPRPVKTPQS
Trigger: GGACTGGGGAGTCTTGACAGGTCTGGGTCTGGCCCCTGATGGCCAGTCTCTCATCTTGATGAAAGAGGATGTGGAATTACTAGAGATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR GCA 90 bp ACAGAACTCCTAGGTTTGTATGAATCATCTGCTTCCTTTGGTATCTaGCAGAGCTGTACAGAGCTATCATCTGAGGTCAGCAGGAGGCCT +
Preference number: 1 (lower is better)
Translates to: TELLGLYESSASFGI*QSCTELSSEVSRRP
Trigger: AGGCCTCCTGCTGACCTCAGATGATAGCTCTGTACAGCTCTGGCAGATACCAAAGGAAGCAGATGATTCATACAAACCTAGGAGTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
3UTR TCA 90 bp TCAGAGGTGGCGCACAAAAGGGATGATTCAGACTCAGGTTTGGCCTaGGTGATTGATACTGGGGACCCATTAGGATTATTTAAGTTCAGA +
Preference number: 1 (lower is better)
Translates to: SEVAHKRDDSDSGLA*VIDTGDPLGLFKFR
Trigger: TCTGAACTTAAATAATCCTAATGGGTCCCCAGTATCAATCACTCAGGCCAAACCTGAGTCTGAATCATCCCTTTTGTGCGCCACCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 90 bp TCTCTGTCCTTCGAAGCTTTTTACACTGCTGTGCCTTTAAATTTGTaGGATCAATCCAGCAATCAATGGAAAAATCCAACTCTGAGTGCG +
Preference number: 1 (lower is better)
Translates to: SLSFEAFYTAVPLNL*DQSSNQWKNPTLSA
Trigger: CGCACTCAGAGTTGGATTTTTCCATTGATTGCTGGATTGATCCCACAAATTTAAAGGCACAGCAGTGTAAAAAGCTTCGAAGGACAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CAA 90 bp GACACAGCCACACTGTGCAGGGAAGGCCGCCAGCCGGGCACCCTCTaGCCAGGCCCACAGCTCCACTGTCCCATCTATCCGGCCCACAGC +
Preference number: 2 (lower is better)
Translates to: DTATLCREGRQPGTL*PGPQLHCPIYPAHS
Trigger: GCTGTGGGCCGGATAGATGGGACAGTGGAGCTGTGGGCCTGGCAAGAGGGTGCCCGGCTGGCGGCCTTCCCTGCACAGTGTGGCTGTGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CAA 90 bp GTGACTGACGCGGCCTGGAGCCTGTGCGGTAGCCACAGCCTTGGCTaGCTGCCACAGTGTCAGTTCCCCGGCTTCATTTCCGGACACCAC +
Preference number: 2 (lower is better)
Translates to: VTDAAWSLCGSHSLG*LPQCQFPGFISGHH
Trigger: GTGGTGTCCGGAAATGAAGCCGGGGAACTGACACTGTGGCAGCAAGCCAAGGCTGTGGCTACCGCACAGGCTCCAGGCCGCGTCAGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR CCA 90 bp CCAACAGGGGATGCCACAACTTTGTGGCCCCATCTAGTCCAACAGTCACCACCAGCTGCAGGGGAGAGCTaGGCTCCATCCAAGGTTCCA +
Preference number: 2 (lower is better)
Translates to: PTGDATTLWPHLVQQSPPAAGES*APSKVP
Trigger: TGGAACCTTGGATGGAGCCCAGCTCTCCCCTGCAGC...TGGTGGTGACTGTTGGACTAGATGGGGCCACAAAGTTGTGGCATCCCCTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR CCA 90 bp CTCAGGAGGGCAACTTCGGAAGGTGCCCGAGGCATCAGGATCACACGTCTTCCAGGTTTCCACTGTGACTaGCAGCCAGCACTTCTTCCC +
Preference number: 2 (lower is better)
Translates to: LRRATSEGARGIRITRLPGFHCD*QPALLP
Trigger: GGGAAGAAGTGCTGGCTGCCAGTCACAGTGGAAACC...TGGAAGACGTGTGATCCTGATGCCTCGGGCACCTTCCGAAGTTGCCCTCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CAA 90 bp CCACAGCCTTCTCCTCCTGCCAGGTTTTCAAGTTCAACAGGTAAATaGTCCCACTGGCGGTCCCCACAGCTGCTCTTTGCCCATTCGGGG +
Preference number: 2 (lower is better)
Translates to: PQPSPPARFSSSTGK*SHWRSPQLLFAHSG
Trigger: CCCCGAATGGGCAAAGAGCAGCTGTGGGGACCGCCAGTGGGACAATTTACCTGTTGAACTTGAAAACCTGGCAGGAGGAGAAGGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CAA 90 bp AAACTACAGACAGAGGGTCCGGGGGCCCCTAGTTCCTTGGTGACTTaGAGTCCATCTGCCTGGAAGAAGGTAATGCTGCCAGCCCAGCTG +
Preference number: 2 (lower is better)
Translates to: KLQTEGPGAPSSLVT*SPSAWKKVMLPAQL
Trigger: CAGCTGGGCTGGCAGCATTACCTTCTTCCAGGCAGATGGACTCAAAGTCACCAAGGAACTAGGGGCCCCCGGACCCTCTGTCTGTAGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CAA 90 bp ACTGTCCCATCTATCCGGCCCACAGCCACAATCTTCCCAGGTTTGTaGAATGCCAAACTACAGACAGAGGGTCCGGGGGCCCCTAGTTCC +
Preference number: 2 (lower is better)
Translates to: TVPSIRPTATIFPGL*NAKLQTEGPGAPSS
Trigger: GGAACTAGGGGCCCCCGGACCCTCTGTCTGTAGTTTGGCATTCAACAAACCTGGGAAGATTGTGGCTGTGGGCCGGATAGATGGGACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CAA 90 bp TCCACTGTCCCATCTATCCGGCCCACAGCCACAATCTTCCCAGGTTaGTTGAATGCCAAACTACAGACAGAGGGTCCGGGGGCCCCTAGT +
Preference number: 2 (lower is better)
Translates to: STVPSIRPTATIFPG*LNAKLQTEGPGAPS
Trigger: ACTAGGGGCCCCCGGACCCTCTGTCTGTAGTTTGGCATTCAACAAACCTGGGAAGATTGTGGCTGTGGGCCGGATAGATGGGACAGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR TCA 90 bp GCAGGAGAAAGAGGAAGAGAGCCCAGGCAACCCCTGGGCCGGCCAAGAAATCCTCTGGTTGTTAAAAGGTaGCTCCTCCAGTCGTTTCCC +
Preference number: 2 (lower is better)
Translates to: AGERGREPRQPLGRPRNPLVVKR*LLQSFP
Trigger: GGGAAACGACTGGAGGAGTCACCTTTTAACAACCAG...AGGATTTCTTGGCCGGCCCAGGGGTTGCCTGGGCTCTCTTCCTCTTTCTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR GCA 90 bp AGGACGAGAAAGTGTGAATCAGGAGAGGGGCTTGGGCTATCTTCATGTCCCAGCTTCAGGCTGGCTAGCTaGCTGCTGGAGCAGGAGCAA +
Preference number: 2 (lower is better)
Translates to: RTRKCESGEGLGLSSCPSFRLAS*LLEQEQ
Trigger: TTGCTCCTGCTCCAGCAGGCAGCTAGCCAGCCTGAA...GCTGGGACATGAAGATAGCCCAAGCCCCTCTCCTGATTCACACTTTCTCGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CAA 90 bp TCGGGGACTAGACCCACTTCCAGATATGCAGCAACCACATGGAGATaGGTAAGAAACTCGGCAAGGAGACCATGGTTCCCGCTCTGGAGC +
Preference number: 2 (lower is better)
Translates to: SGTRPTSRYAATTWR*VRNSARRPWFPLWS
Trigger: GCTCCAGAGCGGGAACCATGGTCTCCTTGCCGAGTTTCTTACCAATCTCCATGTGGTTGCTGCATATCTGGAAGTGGGTCTAGTCCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR TCA 90 bp CTCTGGGTGGAAGGCAACGCAGTTGAGAGACTTTGGATGGGTGTACTGAAAAGCCTGGCAGCAAACAGGTaGCTCTTCAGGCTGGCTAGC +
Preference number: 2 (lower is better)
Translates to: LWVEGNAVERLWMGVLKSLAANR*LFRLAS
Trigger: GCTAGCCAGCCTGAAGAGTCACCTGTTTGCTGCCAG...GCTTTTCAGTACACCCATCCAAAGTCTCTCAACTGCGTTGCCTTCCACCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR CCA 90 bp CTCTGGGTGGAAGGCAACGCAGTTGAGAGACTTTGGATGGGTGTACTGAAAAGCCCAGGCCTGAGTCACTaGACACACTCAGCACCAGGT +
Preference number: 2 (lower is better)
Translates to: LWVEGNAVERLWMGVLKSPGLSH*THSAPG
Trigger: ACCTGGTGCTGAGTGTGTCCAGTGACTCAGGCCTGG...GCTTTTCAGTACACCCATCCAAAGTCTCTCAACTGCGTTGCCTTCCACCCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR CCA 90 bp CTCAGGAGGGCAACTTCGGAAGGTGCCCGAGGCATCAGGATCACACGTCTTCCAGACAAGGTAGGCAAATaGACACAAGGGGAAAGGGTT +
Preference number: 2 (lower is better)
Translates to: LRRATSEGARGIRITRLPDKVGK*TQGERV
Trigger: AACCCTTTCCCCTTGTGTCCATTTGCCTACCTTGTC...TGGAAGACGTGTGATCCTGATGCCTCGGGCACCTTCCGAAGTTGCCCTCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CAA 90 bp AATGGCAGGCTTGAACCCTGCTTTGCCAGCAGCAGCCGCATCTGGTaGTTAAAAGGTGACTCCTCCAGTCGTTTCCCATACAGTGCTAGC +
Preference number: 2 (lower is better)
Translates to: NGRLEPCFASSSRIW*LKGDSSSRFPYSAS
Trigger: GCTAGCACTGTATGGGAAACGACTGGAGGAGTCACCTTTTAACAACCAGATGCGGCTGCTGCTGGCAAAGCAGGGTTCAAGCCTGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CAA 90 bp AAACAGCAACATCTGCCGCTGGGAGCTTCTGGTTGGCTTCAGGCTTaGAAGAAGCATAGAGCACATGAGCCTCCAAGAGGTCGGGGACTA +
Preference number: 2 (lower is better)
Translates to: KQQHLPLGASGWLQA*KKHRAHEPPRGRGL
Trigger: TAGTCCCCGACCTCTTGGAGGCTCATGTGCTCTATGCTTCTTCAAAGCCTGAAGCCAACCAGAAGCTCCCAGCGGCAGATGTTGCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CAA 90 bp TTGAATGCCAAACTACAGACAGAGGGTCCGGGGGCCCCTAGTTCCTaGGTGACTTTGAGTCCATCTGCCTGGAAGAAGGTAATGCTGCCA +
Preference number: 2 (lower is better)
Translates to: LNAKLQTEGPGAPSS*VTLSPSAWKKVMLP
Trigger: TGGCAGCATTACCTTCTTCCAGGCAGATGGACTCAAAGTCACCAAGGAACTAGGGGCCCCCGGACCCTCTGTCTGTAGTTTGGCATTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CAA 90 bp CCTGGAGAGTACGTATTTGGCACACCAACAGGGGATGCCACAACTTaGTGGCCCCATCTAGTCCAACAGTCACCACCAGAAGCTCTGATC +
Preference number: 2 (lower is better)
Translates to: PGEYVFGTPTGDATT*WPHLVQQSPPEALI
Trigger: GATCAGAGCTTCTGGTGGTGACTGTTGGACTAGATGGGGCCACAAAGTTGTGGCATCCCCTGTTGGTGTGCCAAATACGTACTCTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
3UTR-3UTR TCA 90 bp CCACACCCTGATGGTCCCACACTTTCAAGGTCCCATCTCGGCTCACAGATACAAAGAGGTGAGCTGCAATaGGGACATGCGCAGTCTTCT +
Preference number: 2 (lower is better)
Translates to: PHPDGPTLSRSHLGSQIQRGELQ*GHAQSS
Trigger: AGAAGACTGCGCATGTCCTCATTGCAGCTCACCTCT...TTGTATCTGTGAGCCGAGATGGGACCTTGAAAGTGTGGGACCATCAGGGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR TCA 90 bp CCACACCCTGATGGTCCCACACTTTCAAGGTCCCATCTCGGCTCACAGATACAATGGTGGGCCTTGGTCTaGAACACCCAACAACCATGT +
Preference number: 2 (lower is better)
Translates to: PHPDGPTLSRSHLGSQIQWWALV*NTQQPC
Trigger: ACATGGTTGTTGGGTGTTTCAGACCAAGGCCCACCA...TTGTATCTGTGAGCCGAGATGGGACCTTGAAAGTGTGGGACCATCAGGGTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR TCA 90 bp ACTTTGTGGCCCCATCTAGTCCAACAGTCACCACCAGAAGCTCTGATCCAGGCTAACAGCCACAGGGAATaGAGGGAGTCTCCCTTGAAC +
Preference number: 2 (lower is better)
Translates to: TLWPHLVQQSPPEALIQANSHRE*RESPLN
Trigger: GTTCAAGGGAGACTCCCTTCATTCCCTGTGGCTGTT...AGCCTGGATCAGAGCTTCTGGTGGTGACTGTTGGACTAGATGGGGCCACAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR TCA 90 bp ATCCAAGGTTCCAGACAGCTCACTGGCCCTTCACATCGGAACAAGCCCAGCAGCAGAACTCTCTTCAGATaGAGACTGGAACTGGTGGAC +
Preference number: 2 (lower is better)
Translates to: IQGSRQLTGPSHRNKPSSRTLFR*RLELVD
Trigger: GTCCACCAGTTCCAGTCTTCATCTGAAGAGAGTTCT...GCTGCTGGGCTTGTTCCGATGTGAAGGGCCAGTGAGCTGTCTGGAACCTTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR GCA 90 bp ATCCAAGGTTCCAGACAGCTCACTGGCCCTTCACATCGGAACAAGCCCAGCAGCCAGTCTGAAATCAGCTaGCCATTACGATCCACCAAC +
Preference number: 2 (lower is better)
Translates to: IQGSRQLTGPSHRNKPSSQSEIS*PLRSTN
Trigger: GTTGGTGGATCGTAATGGGCAGCTGATTTCAGACTG...GCTGCTGGGCTTGTTCCGATGTGAAGGGCCAGTGAGCTGTCTGGAACCTTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR CCA 90 bp ACTTTGTGGCCCCATCTAGTCCAACAGTCACCACCAGAAGCTCTGATCCAGGCTGCCGCGGAAGAGACTTaGGGATCCAGTCTGAAATCA +
Preference number: 2 (lower is better)
Translates to: TLWPHLVQQSPPEALIQAAAEET*GSSLKS
Trigger: TGATTTCAGACTGGATCCCCAAGTCTCTTCCGCGGC...AGCCTGGATCAGAGCTTCTGGTGGTGACTGTTGGACTAGATGGGGCCACAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR GCA 90 bp TCGGAAGGTGCCCGAGGCATCAGGATCACACGTCTTCCAGAGGTGAGCTGCAATATCCACCAACTTATCTaGCCCATCGATGATAAGGAC +
Preference number: 2 (lower is better)
Translates to: SEGARGIRITRLPEVSCNIHQLI*PIDDKD
Trigger: GTCCTTATCATCGATGGGGCAGATAAGTTGGTGGAT...ATTGCAGCTCACCTCTGGAAGACGTGTGATCCTGATGCCTCGGGCACCTTCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR TCA 90 bp ATCCAAGGTTCCAGACAGCTCACTGGCCCTTCACATCGGAACAAGCCCAGCAGCACTCCTAGGTTTGTATaGATCATCTGCTTCCTTTGG +
Preference number: 2 (lower is better)
Translates to: IQGSRQLTGPSHRNKPSSTPRFV*IICFLW
Trigger: CCAAAGGAAGCAGATGATTCATACAAACCTAGGAGT...GCTGCTGGGCTTGTTCCGATGTGAAGGGCCAGTGAGCTGTCTGGAACCTTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR GCA 90 bp CCACACCCTGATGGTCCCACACTTTCAAGGTCCCATCTCGGCTCACAGATACAACAGGGATCCATCTTCTaGACCACTCACCAAAACACT +
Preference number: 2 (lower is better)
Translates to: PHPDGPTLSRSHLGSQIQQGSIF*TTHQNT
Trigger: AGTGTTTTGGTGAGTGGTGCAGAAGATGGATCCCTG...TTGTATCTGTGAGCCGAGATGGGACCTTGAAAGTGTGGGACCATCAGGGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR CCA 90 bp AGTCAGGAACCGGTCTCCAGCATGCAAGAAAAGAACAGCAGAGACACAGCCACAAGCAGCAGCCGCATCTaGTTGTTAAAAGGTGACTCC +
Preference number: 2 (lower is better)
Translates to: SQEPVSSMQEKNSRDTATSSSRI*LLKGDS
Trigger: GGAGTCACCTTTTAACAACCAGATGCGGCTGCTGCT...TGTGGCTGTGTCTCTGCTGTTCTTTTCTTGCATGCTGGAGACCGGTTCCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR TCA 90 bp TTCTGCCAAATGTTATCTACGATCCATTCTCCCTCTGAGGTACATTCAGATAAGGGTCTCACCCAGGCCTaGGTCACTGGACACACTCAG +
Preference number: 2 (lower is better)
Translates to: FCQMLSTIHSPSEVHSDKGLTQA*VTGHTQ
Trigger: CTGAGTGTGTCCAGTGACTCAGGCCTGGGTGAGACC...CTTATCTGAATGTACCTCAGAGGGAGAATGGATCGTAGATAACATTTGGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR TCA 90 bp CACACTTTCAAGGTCCCATCTCGGCTCACAGATACAATGTGTTCCTCCACAGCAAGGCCCCTGGGAACCTaGAGAAATCTTGTAGATGTT +
Preference number: 2 (lower is better)
Translates to: HTFKVPSRLTDTMCSSTARPLGT*RNLVDV
Trigger: AACATCTACAAGATTTCTTCAGGTTCCCAGGGGCCT...TGCTGTGGAGGAACACATTGTATCTGTGAGCCGAGATGGGACCTTGAAAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR CCA 90 bp TTCTGCCAAATGTTATCTACGATCCATTCTCCCTCTGAGGTACATTCAGATAAGGATCCCTGCCAGCTGTaGCCAAGATGCCTCCATCAG +
Preference number: 2 (lower is better)
Translates to: FCQMLSTIHSPSEVHSDKDPCQL*PRCLHQ
Trigger: CTGATGGAGGCATCTTGGCCACAGCTGGCAGGGATC...CTTATCTGAATGTACCTCAGAGGGAGAATGGATCGTAGATAACATTTGGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR CCA 90 bp TTCTGCCAAATGTTATCTACGATCCATTCTCCCTCTGAGGTACATTCAGATAAGCTCACGGCACTCTGGTaGCCTGAGAACTGGCCAAGT +
Preference number: 2 (lower is better)
Translates to: FCQMLSTIHSPSEVHSDKLTALW*PENWPS
Trigger: ACTTGGCCAGTTCTCAGGCCACCAGAGTGCCGTGAG...CTTATCTGAATGTACCTCAGAGGGAGAATGGATCGTAGATAACATTTGGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR TCA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCGCTAGCAGCATCTGTTaGCATCATCTTTGTCCTGAG +
Preference number: 2 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVASSIC*HHLCPE
Trigger: CTCAGGACAAAGATGATGTCAACAGATGCTGCTAGC...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000006444.9
ENSMUST00000226222.2
ENSMUST00000226430.2
3UTR-3UTR GCA 90 bp TTCTGCCAAATGTTATCTACGATCCATTCTCCCTCTGAGGTACATTCAGATAAGCCTCCCCTAGTAAACTaGGTAGACTCTGGACAAGGT +
Preference number: 2 (lower is better)
Translates to: FCQMLSTIHSPSEVHSDKPPLVN*VDSGQG
Trigger: ACCTTGTCCAGAGTCTACGCAGTTTACTAGGGGAGG...CTTATCTGAATGTACCTCAGAGGGAGAATGGATCGTAGATAACATTTGGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR GCA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCCTTTGTCCTGAGTACTaGATCTTCATTCCCAAGATA +
Preference number: 2 (lower is better)
Translates to: LTKNIDTGVFRLAASVDILCPEY*IFIPKI
Trigger: TATCTTGGGAATGAAGATGCAGTACTCAGGACAAAG...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226222.2
ENSMUST00000226430.2
3UTR CAA 90 bp ACATCTCTGTCCTTCGAAGCTTTTTACACTGCTGTGCCTTTAAATTaGTGGGATCAATCCAGCAATCAATGGAAAAATCCAACTCTGAGT +
Preference number: 2 (lower is better)
Translates to: TSLSFEAFYTAVPLN*WDQSSNQWKNPTLS
Trigger: ACTCAGAGTTGGATTTTTCCATTGATTGCTGGATTGATCCCACAAATTTAAAGGCACAGCAGTGTAAAAAGCTTCGAAGGACAGAGATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR GCA 72 bp CACTGTGCAGGGAAGGCCGCCAGCCGGGCACCCTCTTaGCAGGCCCACAGCTCCACTGTCCCATCTATCCGG +
Preference number: 3 (lower is better)
Translates to: HCAGKAASRAPS*QAHSSTVPSIR
Trigger: CCGGATAGATGGGACAGTGGAGCTGTGGGCCTGGCAAGAGGGTGCCCGGCTGGCGGCCTTCCCTGCACAGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR GCA 72 bp TCCAGGCTGTCCCCCTGGGCGGGGCTCCAGAGCAGCTaGACACTGGCTGATGGGTCCGGAATGGGCAGGGAT +
Preference number: 3 (lower is better)
Translates to: SRLSPWAGLQSS*TLADGSGMGRD
Trigger: ATCCCTGCCCATTCCGGACCCATCAGCCAGTGTGCAGCTGCTCTGGAGCCCCGCCCAGGGGGACAGCCTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
3UTR CCA 72 bp TGTCCCCCTGGGCGGGGCTCCAGAGCAGCTGCACACTaGCTGATGGGTCCGGAATGGGCAGGGATGCTGGTC +
Preference number: 3 (lower is better)
Translates to: CPPGRGSRAAAH*LMGPEWAGMLV
Trigger: GACCAGCATCCCTGCCCATTCCGGACCCATCAGCCAGTGTGCAGCTGCTCTGGAGCCCCGCCCAGGGGGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
3UTR TCA 72 bp CCCTGCCAGCTGTGGCCAAGATGCCTCCATCAGGGCTaGAGCTACAGCAGCACACTGGCCCCTCGTGTCCCC +
Preference number: 3 (lower is better)
Translates to: PCQLWPRCLHQG*SYSSTLAPRVP
Trigger: GGGGACACGAGGGGCCAGTGTGCTGCTGTAGCTTCAGCCCTGATGGAGGCATCTTGGCCACAGCTGGCAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR GCA 72 bp CGGCCTGGAGCCTGTGCGGTAGCCACAGCCTTGGCTTaGTGCCACAGTGTCAGTTCCCCGGCTTCATTTCCG +
Preference number: 3 (lower is better)
Translates to: RPGACAVATALA*CHSVSSPASFP
Trigger: CGGAAATGAAGCCGGGGAACTGACACTGTGGCAGCAAGCCAAGGCTGTGGCTACCGCACAGGCTCCAGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 72 bp ACCACGGCGCTCACGGCACTCTGGTGGCCTGAGAACTaGCCAAGTTGCTGCCCTGCCTCTGGGTTCCAGAGT +
Preference number: 3 (lower is better)
Translates to: TTALTALWWPEN*PSCCPASGFQS
Trigger: ACTCTGGAACCCAGAGGCAGGGCAGCAACTTGGCCAGTTCTCAGGCCACCAGAGTGCCGTGAGCGCCGTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
3UTR CCA 72 bp TCCTCCACAGCAACCACGGCGCTCACGGCACTCTGGTaGCCTGAGAACTGGCCAAGTTGCTGCCCTGCCTCT +
Preference number: 3 (lower is better)
Translates to: SSTATTALTALW*PENWPSCCPAS
Trigger: AGAGGCAGGGCAGCAACTTGGCCAGTTCTCAGGCCACCAGAGTGCCGTGAGCGCCGTGGTTGCTGTGGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
3UTR CCA 72 bp TGTTCCTCCACAGCAACCACGGCGCTCACGGCACTCTaGTGGCCTGAGAACTGGCCAAGTTGCTGCCCTGCC +
Preference number: 3 (lower is better)
Translates to: CSSTATTALTAL*WPENWPSCCPA
Trigger: GGCAGGGCAGCAACTTGGCCAGTTCTCAGGCCACCAGAGTGCCGTGAGCGCCGTGGTTGCTGTGGAGGAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
3UTR TCA 72 bp CAGCTGTCTGGGCCACAGTCTCACAGTGAAGTCCTCTaGGGCAGCAGCCATGAGTTCCCGGGAGGCAGCCAG +
Preference number: 3 (lower is better)
Translates to: QLSGPQSHSEVL*GSSHEFPGGSQ
Trigger: CTGGCTGCCTCCCGGGAACTCATGGCTGCTGCCTCAGAGGACTTCACTGTGAGACTGTGGCCCAGACAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR GCA 72 bp ACGGCACTCTGGTGGCCTGAGAACTGGCCAAGTTGCTaGCCTGCCTCTGGGTTCCAGAGTCCCACAGAGCCA +
Preference number: 3 (lower is better)
Translates to: TALWWPENWPSC*PASGFQSPTEP
Trigger: TGGCTCTGTGGGACTCTGGAACCCAGAGGCAGGGCAGCAACTTGGCCAGTTCTCAGGCCACCAGAGTGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
3UTR GCA 72 bp CTCACGGCACTCTGGTGGCCTGAGAACTGGCCAAGTTaGTGCCCTGCCTCTGGGTTCCAGAGTCCCACAGAG +
Preference number: 3 (lower is better)
Translates to: LTALWWPENWPS*CPASGFQSPTE
Trigger: CTCTGTGGGACTCTGGAACCCAGAGGCAGGGCAGCAACTTGGCCAGTTCTCAGGCCACCAGAGTGCCGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
3UTR GCA 72 bp GTACCAGATCAGGTGACTGACGCGGCCTGGAGCCTGTaGGGTAGCCACAGCCTTGGCTTGCTGCCACAGTGT +
Preference number: 3 (lower is better)
Translates to: VPDQVTDAAWSL*GSHSLGLLPQC
Trigger: ACACTGTGGCAGCAAGCCAAGGCTGTGGCTACCGCACAGGCTCCAGGCCGCGTCAGTCACCTGATCTGGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 72 bp TCCTCCCAAACACACAGTGGCCAGCAGGCGGCGGTCTaGGCTCAGGCAGCAGCCAGTGATTTGGTACTGGTG +
Preference number: 3 (lower is better)
Translates to: SSQTHSGQQAAV*AQAAASDLVLV
Trigger: CACCAGTACCAAATCACTGGCTGCTGCCTGAGCCCAGACCGCCGCCTGCTGGCCACTGTGTGTTTGGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 72 bp TGTCCCACAGCTTTAGGTATCCTCCCAAACACACAGTaGCCAGCAGGCGGCGGTCTGGGCTCAGGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: CPTALGILPNTQ*PAGGGLGSGSS
Trigger: GCTGCTGCCTGAGCCCAGACCGCCGCCTGCTGGCCACTGTGTGTTTGGGAGGATACCTAAAGCTGTGGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 72 bp CCGGAATGGGCAGGGATGCTGGTCAGCTCCACACCCTaGTGGTCCCACACTTTCAAGGTCCCATCTCGGCTC +
Preference number: 3 (lower is better)
Translates to: PEWAGMLVSSTP*WSHTFKVPSRL
Trigger: GAGCCGAGATGGGACCTTGAAAGTGTGGGACCATCAGGGTGTGGAGCTGACCAGCATCCCTGCCCATTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
3UTR CCA 72 bp ATTTGCCGAGTACCAGATCAGGTGACTGACGCGGCCTaGAGCCTGTGCGGTAGCCACAGCCTTGGCTTGCTG +
Preference number: 3 (lower is better)
Translates to: ICRVPDQVTDAA*SLCGSHSLGLL
Trigger: CAGCAAGCCAAGGCTGTGGCTACCGCACAGGCTCCAGGCCGCGTCAGTCACCTGATCTGGTACTCGGCAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 72 bp CTCGGTACCCAACAGCCACCTGGTCACCGTCTGGGTTaGGAGCCACCGAGAGTGCAGGAGAAAGAGGAAGAG +
Preference number: 3 (lower is better)
Translates to: LGTQQPPGHRLG*EPPRVQEKEEE
Trigger: CTCTTCCTCTTTCTCCTGCACTCTCGGTGGCTCTCAACCCAGACGGTGACCAGGTGGCTGTTGGGTACCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR CAA 90 bp GCAGGAGAAAGAGGAAGAGAGCCCAGGCAACCCCTGGGCCGGCCAAGAAATCCTGGGGCCCCTAGTTCCTaGGTGACTTTGAGTCCATCT +
Preference number: 3 (lower is better)
Translates to: AGERGREPRQPLGRPRNPGAPSS*VTLSPS
Trigger: AGATGGACTCAAAGTCACCAAGGAACTAGGGGCCCC...AGGATTTCTTGGCCGGCCCAGGGGTTGCCTGGGCTCTCTTCCTCTTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 72 bp CTATCCGGCCCACAGCCACAATCTTCCCAGGTTTGTTaGATGCCAAACTACAGACAGAGGGTCCGGGGGCCC +
Preference number: 3 (lower is better)
Translates to: LSGPQPQSSQVC*MPNYRQRVRGP
Trigger: GGGCCCCCGGACCCTCTGTCTGTAGTTTGGCATTCAACAAACCTGGGAAGATTGTGGCTGTGGGCCGGATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR GCA 72 bp CACCAGGGCGCTCCACTGGGCCCTCCCCTAGTAAACTaGGTAGACTCTGGACAAGGTAGGCAAATGGACACA +
Preference number: 3 (lower is better)
Translates to: HQGAPLGPPLVN*VDSGQGRQMDT
Trigger: TGTGTCCATTTGCCTACCTTGTCCAGAGTCTACGCAGTTTACTAGGGGAGGGCCCAGTGGAGCGCCCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR GCA 72 bp CAACAGGTAAATTGTCCCACTGGCGGTCCCCACAGCTaGTCTTTGCCCATTCGGGGAGAAGGCCACAGCAGT +
Preference number: 3 (lower is better)
Translates to: QQVNCPTGGPHS*SLPIRGEGHSS
Trigger: ACTGCTGTGGCCTTCTCCCCGAATGGGCAAAGAGCAGCTGTGGGGACCGCCAGTGGGACAATTTACCTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 72 bp GTGCAGGAGAAAGAGGAAGAGAGCCCAGGCAACCCCTaGGCCGGCCAAGAAATCCTGACCATAACTGAGCCT +
Preference number: 3 (lower is better)
Translates to: VQEKEEESPGNP*AGQEILTITEP
Trigger: AGGCTCAGTTATGGTCAGGATTTCTTGGCCGGCCCAGGGGTTGCCTGGGCTCTCTTCCTCTTTCTCCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 72 bp GTGCCCGAGGCATCAGGATCACACGTCTTCCAGAGGTaGGCTGCAATGAGGACATGCGCAGTCTTCTCTAGC +
Preference number: 3 (lower is better)
Translates to: VPEASGSHVFQR*AAMRTCAVFSS
Trigger: GCTAGAGAAGACTGCGCATGTCCTCATTGCAGCTCACCTCTGGAAGACGTGTGATCCTGATGCCTCGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR GCA 72 bp TGGGCCGGCCAAGAAATCCTGACCATAACTGAGCCTTaGCATCTTCTCCAGCAGTCAGGAACCGGTCTCCAG +
Preference number: 3 (lower is better)
Translates to: WAGQEILTITEP*HLLQQSGTGLQ
Trigger: CTGGAGACCGGTTCCTGACTGCTGGAGAAGATGGCAAGGCTCAGTTATGGTCAGGATTTCTTGGCCGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 72 bp CCCCTCTGGGTGGAAGGCAACGCAGTTGAGAGACTTTaGATGGGTGTACTGAAAAGCCAGCTGTCCTCGGAC +
Preference number: 3 (lower is better)
Translates to: PLWVEGNAVERL*MGVLKSQLSSD
Trigger: GTCCGAGGACAGCTGGCTTTTCAGTACACCCATCCAAAGTCTCTCAACTGCGTTGCCTTCCACCCAGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 72 bp GCCCCTAGTTCCTTGGTGACTTTGAGTCCATCTGCCTaGAAGAAGGTAATGCTGCCAGCCCAGCTGCCTGTG +
Preference number: 3 (lower is better)
Translates to: APSSLVTLSPSA*KKVMLPAQLPV
Trigger: CACAGGCAGCTGGGCTGGCAGCATTACCTTCTTCCAGGCAGATGGACTCAAAGTCACCAAGGAACTAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 72 bp TTCAGCACAACAGGGCAACTCTACCGCATGCACATGTaGCTGTGTCAGCAGCTGTCTGGGCCACAGTCTCAC +
Preference number: 3 (lower is better)
Translates to: FSTTGQLYRMHM*LCQQLSGPQSH
Trigger: GTGAGACTGTGGCCCAGACAGCTGCTGACACAGCCACATGTGCATGCGGTAGAGTTGCCCTGTTGTGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 72 bp GTGACTGGGCCACTGTGTCCCTGGAGAGTACGTATTTaGCACACCAACAGGGGATGCCACAACTTTGTGGCC +
Preference number: 3 (lower is better)
Translates to: VTGPLCPWRVRI*HTNRGCHNFVA
Trigger: GGCCACAAAGTTGTGGCATCCCCTGTTGGTGTGCCAAATACGTACTCTCCAGGGACACAGTGGCCCAGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
3UTR GCA 72 bp AATCTTTCAGAGCCTCAGGAGGGCAACTTCGGAAGGTaGCCGAGGCATCAGGATCACACGTCTTCCAGAGGT +
Preference number: 3 (lower is better)
Translates to: NLSEPQEGNFGR*PRHQDHTSSRG
Trigger: ACCTCTGGAAGACGTGTGATCCTGATGCCTCGGGCACCTTCCGAAGTTGCCCTCCTGAGGCTCTGAAAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR GCA 72 bp CAGCAAACAGGTGACTCTTCAGGCTGGCTAGCTGCCTaGTGGAGCAGGAGCAAAGGATACTGGGTAAGGAGT +
Preference number: 3 (lower is better)
Translates to: QQTGDSSGWLAA*WSRSKGYWVRS
Trigger: ACTCCTTACCCAGTATCCTTTGCTCCTGCTCCAGCAGGCAGCTAGCCAGCCTGAAGAGTCACCTGTTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 72 bp ATGTTAATGCCATCTTCTCGGTACCCAACAGCCACCTaGTCACCGTCTGGGTTGAGAGCCACCGAGAGTGCA +
Preference number: 3 (lower is better)
Translates to: MLMPSSRYPTAT*SPSGLRATESA
Trigger: TGCACTCTCGGTGGCTCTCAACCCAGACGGTGACCAGGTGGCTGTTGGGTACCGAGAAGATGGCATTAACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 72 bp CATCAGGATCACACGTCTTCCAGAGGTGAGCTGCAATaGGGACATGCGCAGTCTTCTCTAGCCCCAGCCTTT +
Preference number: 3 (lower is better)
Translates to: HQDHTSSRGELQ*GHAQSSLAPAF
Trigger: AAAGGCTGGGGCTAGAGAAGACTGCGCATGTCCTCATTGCAGCTCACCTCTGGAAGACGTGTGATCCTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 72 bp ATCTGCCGCTGGGAGCTTCTGGTTGGCTTCAGGCTTTaGAGAAGCATAGAGCACATGAGCCTCCAAGAGGTC +
Preference number: 3 (lower is better)
Translates to: ICRWELLVGFRL*RSIEHMSLQEV
Trigger: GACCTCTTGGAGGCTCATGTGCTCTATGCTTCTTCAAAGCCTGAAGCCAACCAGAAGCTCCCAGCGGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 72 bp TTGCCCATTCGGGGAGAAGGCCACAGCAGTTGGGGATaGGGACATTGTCAGAGACAAGCTTTGCTGACCCTT +
Preference number: 3 (lower is better)
Translates to: LPIRGEGHSSWG*GHCQRQALLTL
Trigger: AAGGGTCAGCAAAGCTTGTCTCTGACAATGTCCTCATCCCCAACTGCTGTGGCCTTCTCCCCGAATGGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 72 bp AAGGCAACGCAGTTGAGAGACTTTGGATGGGTGTACTaGAAAGCCAGCTGTCCTCGGACTGTGTCCCACAGC +
Preference number: 3 (lower is better)
Translates to: KATQLRDFGWVY*KASCPRTVSHS
Trigger: GCTGTGGGACACAGTCCGAGGACAGCTGGCTTTTCAGTACACCCATCCAAAGTCTCTCAACTGCGTTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR GCA 72 bp CGCGGAAGAGACTTGGGGATCCAGTCTGAAATCAGCTaGCCATTACGATCCACCAACTTATCTGCCCCATCG +
Preference number: 3 (lower is better)
Translates to: RGRDLGIQSEIS*PLRSTNLSAPS
Trigger: CGATGGGGCAGATAAGTTGGTGGATCGTAATGGGCAGCTGATTTCAGACTGGATCCCCAAGTCTCTTCCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR GCA 72 bp ACCCAACAACCATGTTGCAGGTCCCAAAGCTCTAGGTaGCCGTCGAAGGTAGTAAGGAAAAGGGCAGTGTCC +
Preference number: 3 (lower is better)
Translates to: TQQPCCRSQSSR*PSKVVRKRAVS
Trigger: GGACACTGCCCTTTTCCTTACTACCTTCGACGGGCACCTAGAGCTTTGGGACCTGCAACATGGTTGTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 72 bp CAAACAGGTGACTCTTCAGGCTGGCTAGCTGCCTGCTaGAGCAGGAGCAAAGGATACTGGGTAAGGAGTGAA +
Preference number: 3 (lower is better)
Translates to: QTGDSSGWLAAC*SRSKGYWVRSE
Trigger: TTCACTCCTTACCCAGTATCCTTTGCTCCTGCTCCAGCAGGCAGCTAGCCAGCCTGAAGAGTCACCTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR-3UTR CAA 90 bp GGTATGGAAAACAGCAACATCTGCCGCTGGGAGCTTCTGGTTGGCTTCAGGCTTATAAGCACCCTGACTTaGCTGAAGGGTCTCACCCAG +
Preference number: 3 (lower is better)
Translates to: GMENSNICRWELLVGFRLISTLT*LKGLTQ
Trigger: CTGGGTGAGACCCTTCAGCAAAGTCAGGGTGCTTAT...AAGCCTGAAGCCAACCAGAAGCTCCCAGCGGCAGATGTTGCTGTTTTCCATACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 72 bp GTGTACTCGCCGCGGAAGAGACTTGGGGATCCAGTCTaGAATCAGCTGCCCATTACGATCCACCAACTTATC +
Preference number: 3 (lower is better)
Translates to: VYSPRKRLGDPV*NQLPITIHQLI
Trigger: GATAAGTTGGTGGATCGTAATGGGCAGCTGATTTCAGACTGGATCCCCAAGTCTCTTCCGCGGCGAGTACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 72 bp TTGCATGTAGCTGGTCCACAGTCAGACCACTTCGTGTaGCCTCAAGGGCAGTCAAAGCCTGAGGAAGGACAT +
Preference number: 3 (lower is better)
Translates to: LHVAGPQSDHFV*PQGQSKPEEGH
Trigger: ATGTCCTTCCTCAGGCTTTGACTGCCCTTGAGGTCACACGAAGTGGTCTGACTGTGGACCAGCTACATGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 72 bp TCGACAACAGCCACAGGGAATGAAGGGAGTCTCCCTTaGACATCCAACCATGCAGGGATCCATCTTCTGCAC +
Preference number: 3 (lower is better)
Translates to: STTATGNEGSLP*TSNHAGIHLLH
Trigger: GTGCAGAAGATGGATCCCTGCATGGTTGGATGTTCAAGGGAGACTCCCTTCATTCCCTGTGGCTGTTGTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 72 bp ACAGGCTTCTGGTATCTCGACAACAGCCACAGGGAATaGAGGGAGTCTCCCTTGAACATCCAACCATGCAGG +
Preference number: 3 (lower is better)
Translates to: TGFWYLDNSHRE*RESPLNIQPCR
Trigger: CCTGCATGGTTGGATGTTCAAGGGAGACTCCCTTCATTCCCTGTGGCTGTTGTCGAGATACCAGAAGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR GCA 72 bp AAATACAAGTTTCCTTGTGTGTCTCCCACAGCAAGCTaGAGGGGAGAGCTGGGCTCCATCCAAGGTTCCAGA +
Preference number: 3 (lower is better)
Translates to: KYKFPCVSPTAS*RGELGSIQGSR
Trigger: TCTGGAACCTTGGATGGAGCCCAGCTCTCCCCTGCAGCTTGCTGTGGGAGACACACAAGGAAACTTGTATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226222.2
ENSMUST00000226430.2
3UTR GCA 72 bp GTGACAAGGTGCAGGTACAATGGCAGGCTTGAACCCTaGTTTGCCAGCAGCAGCCGCATCTGGTTGTTAAAA +
Preference number: 3 (lower is better)
Translates to: VTRCRYNGRLEP*FASSSRIWLLK
Trigger: TTTTAACAACCAGATGCGGCTGCTGCTGGCAAAGCAGGGTTCAAGCCTGCCATTGTACCTGCACCTTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR GCA 72 bp TCCCTTGAACATCCAACCATGCAGGGATCCATCTTCTaGACCACTCACCAAAACACTAGGGCTCAGCCACAC +
Preference number: 3 (lower is better)
Translates to: SLEHPTMQGSIF*TTHQNTRAQPH
Trigger: GTGTGGCTGAGCCCTAGTGTTTTGGTGAGTGGTGCAGAAGATGGATCCCTGCATGGTTGGATGTTCAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 72 bp GTATTTGGCACACCAACAGGGGATGCCACAACTTTGTaGCCCCATCTAGTCCAACAGTCACCACCAGAAGCT +
Preference number: 3 (lower is better)
Translates to: VFGTPTGDATTL*PHLVQQSPPEA
Trigger: AGCTTCTGGTGGTGACTGTTGGACTAGATGGGGCCACAAAGTTGTGGCATCCCCTGTTGGTGTGCCAAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
3UTR CCA 72 bp CCCAGTCCTCCTGCAGAACTCTCTTCAGATGAAGACTaGAACTGGTGGACGTTGAACCTTTCCTCAGTCCCA +
Preference number: 3 (lower is better)
Translates to: PSPPAELSSDED*NWWTLNLSSVP
Trigger: TGGGACTGAGGAAAGGTTCAACGTCCACCAGTTCCAGTCTTCATCTGAAGAGAGTTCTGCAGGAGGACTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 72 bp AGACCAGGATGTTGTCTTTGGTCCACGCACAGCCAGTaGTCCAGTCACGATGACAGGACGAGAAAGTGTGAA +
Preference number: 3 (lower is better)
Translates to: RPGCCLWSTHSQ*SSHDDRTRKCE
Trigger: TTCACACTTTCTCGTCCTGTCATCGTGACTGGATCACTGGCTGTGCGTGGACCAAAGACAACATCCTGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 72 bp AAGACTCCCCAGTCCTCCTGCAGAACTCTCTTCAGATaGAGACTGGAACTGGTGGACGTTGAACCTTTCCTC +
Preference number: 3 (lower is better)
Translates to: KTPQSSCRTLFR*RLELVDVEPFL
Trigger: GAGGAAAGGTTCAACGTCCACCAGTTCCAGTCTTCATCTGAAGAGAGTTCTGCAGGAGGACTGGGGAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 72 bp GGGACTAGACCCACTTCCAGATATGCAGCAACCACATaGAGATTGGTAAGAAACTCGGCAAGGAGACCATGG +
Preference number: 3 (lower is better)
Translates to: GTRPTSRYAATT*RLVRNSARRPW
Trigger: CCATGGTCTCCTTGCCGAGTTTCTTACCAATCTCCATGTGGTTGCTGCATATCTGGAAGTGGGTCTAGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 72 bp TCATCTCTAGTAATTCCACATCCTCTTTCATCAAGATaGGAGACTGGCCATCAGGGGCCAGACCCAGACCTG +
Preference number: 3 (lower is better)
Translates to: SSLVIPHPLSSR*ETGHQGPDPDL
Trigger: CAGGTCTGGGTCTGGCCCCTGATGGCCAGTCTCTCATCTTGATGAAAGAGGATGTGGAATTACTAGAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 72 bp CTCGCTGACGTTTTCATTAGCACTGAGAACGAAGAATaGATTTGCCGAGTACCAGATCAGGTGACTGACGCG +
Preference number: 3 (lower is better)
Translates to: LADVFISTENEE*ICRVPDQVTDA
Trigger: CGCGTCAGTCACCTGATCTGGTACTCGGCAAATTCATTCTTCGTTCTCAGTGCTAATGAAAACGTCAGCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 72 bp GGGATCAATCCAGCAATCAATGGAAAAATCCAACTCTaGGTGCGGGGACAACTCTGTCTCCAGAGTCTGAGT +
Preference number: 3 (lower is better)
Translates to: GINPAINGKIQL*VRGQLCLQSLS
Trigger: ACTCAGACTCTGGAGACAGAGTTGTCCCCGCACTCAGAGTTGGATTTTTCCATTGATTGCTGGATTGATCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 72 bp GTTGGGGATGAGGACATTGTCAGAGACAAGCTTTGCTaGCCCTTCAGGGTCTGGGGTTTATTAATCCATTTC +
Preference number: 3 (lower is better)
Translates to: VGDEDIVRDKLC*PFRVWGLLIHF
Trigger: GAAATGGATTAATAAACCCCAGACCCTGAAGGGTCAGCAAAGCTTGTCTCTGACAATGTCCTCATCCCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CCA 72 bp TACATTCAGATAAGTTCCACAGCATCCCATCAGAGGTaGCGCACAAAAGGGATGATTCAGACTCAGGTTTGG +
Preference number: 3 (lower is better)
Translates to: YIQISSTASHQR*RTKGMIQTQVW
Trigger: CCAAACCTGAGTCTGAATCATCCCTTTTGTGCGCCACCTCTGATGGGATGCTGTGGAACTTATCTGAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 72 bp GTAGAACAAGCCGTACTCCTTGCTGGTGCACAGTATTaGAGAATGTACTCCATACCTCCTGCAGATAGAAGA +
Preference number: 3 (lower is better)
Translates to: VEQAVLLAGAQY*RMYSIPPADRR
Trigger: TCTTCTATCTGCAGGAGGTATGGAGTACATTCTTCAATACTGTGCACCAGCAAGGAGTACGGCTTGTTCTAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR TCA 72 bp GCGCACAAAAGGGATGATTCAGACTCAGGTTTGGCCTaGGTGATTGATACTGGGGACCCATTAGGATTATTT +
Preference number: 3 (lower is better)
Translates to: AHKRDDSDSGLA*VIDTGDPLGLF
Trigger: AAATAATCCTAATGGGTCCCCAGTATCAATCACTCAGGCCAAACCTGAGTCTGAATCATCCCTTTTGTGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR GCA 72 bp CTAGGTTTGTATGAATCATCTGCTTCCTTTGGTATCTaGCAGAGCTGTACAGAGCTATCATCTGAGGTCAGC +
Preference number: 3 (lower is better)
Translates to: LGLYESSASFGI*QSCTELSSEVS
Trigger: GCTGACCTCAGATGATAGCTCTGTACAGCTCTGGCAGATACCAAAGGAAGCAGATGATTCATACAAACCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
3UTR TCA 72 bp TATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTaGCATCATCTTTGTCCTGAGTACTGCATCTTCATT +
Preference number: 3 (lower is better)
Translates to: YRHRCLQASSIC*HHLCPEYCIFI
Trigger: AATGAAGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226222.2
ENSMUST00000226430.2
3UTR CCA 72 bp TTCGAAGCTTTTTACACTGCTGTGCCTTTAAATTTGTaGGATCAATCCAGCAATCAATGGAAAAATCCAACT +
Preference number: 3 (lower is better)
Translates to: FEAFYTAVPLNL*DQSSNQWKNPT
Trigger: AGTTGGATTTTTCCATTGATTGCTGGATTGATCCCACAAATTTAAAGGCACAGCAGTGTAAAAAGCTTCGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CAA 72 bp CTGACGCGGCCTGGAGCCTGTGCGGTAGCCACAGCCTaGGCTTGCTGCCACAGTGTCAGTTCCCCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LTRPGACAVATA*ACCHSVSSPAS
Trigger: TGAAGCCGGGGAACTGACACTGTGGCAGCAAGCCAAGGCTGTGGCTACCGCACAGGCTCCAGGCCGCGTCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CAA 72 bp GCGGCCTGGAGCCTGTGCGGTAGCCACAGCCTTGGCTaGCTGCCACAGTGTCAGTTCCCCGGCTTCATTTCC +
Preference number: 4 (lower is better)
Translates to: AAWSLCGSHSLG*LPQCQFPGFIS
Trigger: GGAAATGAAGCCGGGGAACTGACACTGTGGCAGCAAGCCAAGGCTGTGGCTACCGCACAGGCTCCAGGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR GCA 90 bp GGCTGTCCCCCTGGGCGGGGCTCCAGAGCAGCTGCACACTGGCTGATGGGTCCGGGGGCCACTCATCATTaGCTTCTAACTCCTGGACTT +
Preference number: 4 (lower is better)
Translates to: GCPPGRGSRAAAHWLMGPGATHH*LLTPGL
Trigger: AAGTCCAGGAGTTAGAAGGCAATGATGAGTGGCCCC...CGGACCCATCAGCCAGTGTGCAGCTGCTCTGGAGCCCCGCCCAGGGGGACAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR CCA 90 bp GCAGGAGAAAGAGGAAGAGAGCCCAGGCAACCCCTGGGCCGGCCAAGAAATCCTGTTGGCTGCTCCAACTaGGCCCCAGGCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: AGERGREPRQPLGRPRNPVGCSN*APGCRC
Trigger: GCACCTGCAGCCTGGGGCCCAGTTGGAGCAGCCAAC...AGGATTTCTTGGCCGGCCCAGGGGTTGCCTGGGCTCTCTTCCTCTTTCTCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR GCA 90 bp ACACTGGCTGATGGGTCCGGAATGGGCAGGGATGCTGGTCAGCTCCACACCCTGAACTGGGCCCCAGGCTaGAGGTGCTGCTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: TLADGSGMGRDAGQLHTLNWAPG*RCCFWI
Trigger: GATCCAGAAGCAGCACCTGCAGCCTGGGGCCCAGTT...CAGGGTGTGGAGCTGACCAGCATCCCTGCCCATTCCGGACCCATCAGCCAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR CCA 90 bp GGCTGTCCCCCTGGGCGGGGCTCCAGAGCAGCTGCACACTGGCTGATGGGTCCGGTATATGCAAGGCCTTaGGTTCAGTATCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: GCPPGRGSRAAAHWLMGPVYARP*VQYPPA
Trigger: TGCTGGTGGATACTGAACCCAAGGCCTTGCATATAC...CGGACCCATCAGCCAGTGTGCAGCTGCTCTGGAGCCCCGCCCAGGGGGACAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000227526.2
CDS-3UTR TCA 90 bp GCTGATGGGTCCGGAATGGGCAGGGATGCTGGTCAGCTCCACACCCTGATGGTCCTTGAGCCTGAAGTTTaGTGGCAGTCTTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: ADGSGMGRDAGQLHTLMVLEPEV*WQSSGC
Trigger: GCATCCTGAAGACTGCCATCAAACTTCAGGCTCAAG...GACCATCAGGGTGTGGAGCTGACCAGCATCCCTGCCCATTCCGGACCCATCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR GCA 90 bp GCCCCATCTAGTCCAACAGTCACCACCAGAAGCTCTGATCCAGGCTGTCCCCCTCACTCTGGCCTGCAGTaGGGGCAGAACAGATCTCAT +
Preference number: 4 (lower is better)
Translates to: APSSPTVTTRSSDPGCPPHSGLQ*GQNRSH
Trigger: ATGAGATCTGTTCTGCCCGCACTGCAGGCCAGAGTG...AGGGGGACAGCCTGGATCAGAGCTTCTGGTGGTGACTGTTGGACTAGATGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR GCA 90 bp GAAGGTGCCCGAGGCATCAGGATCACACGTCTTCCAGAGGTGAGCTGCAATGAGCCAGGCTGCAGGTGCTaGTTCTGGATCATGCTCCAC +
Preference number: 4 (lower is better)
Translates to: EGARGIRITRLPEVSCNEPGCRC*FWIMLH
Trigger: GTGGAGCATGATCCAGAAGCAGCACCTGCAGCCTGG...CTCATTGCAGCTCACCTCTGGAAGACGTGTGATCCTGATGCCTCGGGCACCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR TCA 90 bp ACTTTGTGGCCCCATCTAGTCCAACAGTCACCACCAGAAGCTCTGATCCAGGCTCCCCACGAACAGCTGTaGGTTCTCCACCTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: TLWPHLVQQSPPEALIQAPHEQL*VLHLPK
Trigger: CTTGGGGAGGTGGAGAACTCACAGCTGTTCGTGGGG...AGCCTGGATCAGAGCTTCTGGTGGTGACTGTTGGACTAGATGGGGCCACAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR CCA 90 bp CTTGAACCCTGCTTTGCCAGCAGCAGCCGCATCTGGTTGTTAAAAGGTGACTCCATCCTGAAGAAGGCGTaGCCGTGCCGGACTCGTTGG +
Preference number: 4 (lower is better)
Translates to: LEPCFASSSRIWLLKGDSILKKA*PCRTRW
Trigger: CCAACGAGTCCGGCACGGCCACGCCTTCTTCAGGAT...GGAGTCACCTTTTAACAACCAGATGCGGCTGCTGCTGGCAAAGCAGGGTTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR CCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCACAGCAGGCGGCGGTCTaGGCTCAGGCAGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTAQQAAV*AQAAAS
Trigger: ACTGGCTGCTGCCTGAGCCCAGACCGCCGCCTGCTG...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
3UTR CAA 72 bp ACAGAGGGTCCGGGGGCCCCTAGTTCCTTGGTGACTTaGAGTCCATCTGCCTGGAAGAAGGTAATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: TEGPGAPSSLVT*SPSAWKKVMLP
Trigger: TGGCAGCATTACCTTCTTCCAGGCAGATGGACTCAAAGTCACCAAGGAACTAGGGGCCCCCGGACCCTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CAA 72 bp TCTATCCGGCCCACAGCCACAATCTTCCCAGGTTTGTaGAATGCCAAACTACAGACAGAGGGTCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: SIRPTATIFPGL*NAKLQTEGPGA
Trigger: GGCCCCCGGACCCTCTGTCTGTAGTTTGGCATTCAACAAACCTGGGAAGATTGTGGCTGTGGGCCGGATAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR TCA 90 bp CTCAGGAGGGCAACTTCGGAAGGTGCCCGAGGCATCAGGATCACACGTCTTCCAATATCTCTTCAGCTCTaGGACCCGATGTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LRRATSEGARGIRITRLPISLQL*DPMCSF
Trigger: GAAGCTGCACATCGGGTCTCAGAGCTGAAGAGATAT...TGGAAGACGTGTGATCCTGATGCCTCGGGCACCTTCCGAAGTTGCCCTCCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR TCA 90 bp TTCAAGGTCCCATCTCGGCTCACAGATACAATGTGTTCCTCCACAGCAACCACGTGCTGCACTGTATCCTaGAGAAGGCGTGGCCGTGCC +
Preference number: 4 (lower is better)
Translates to: FKVPSRLTDTMCSSTATTCCTVS*RRRGRA
Trigger: GGCACGGCCACGCCTTCTTCAGGATACAGTGCAGCA...CGTGGTTGCTGTGGAGGAACACATTGTATCTGTGAGCCGAGATGGGACCTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR CCA 90 bp CCCATCTCGGCTCACAGATACAATGTGTTCCTCCACAGCAACCACGGCGCTCACTCAATGGGGGTCCTTTaGACAGCCAGAGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: PISAHRYNVFLHSNHGAHSMGVL*TARDSR
Trigger: TCTGCTGTCTCTGGCTGTCCAAAGGACCCCCATTGA...GTGAGCGCCGTGGTTGCTGTGGAGGAACACATTGTATCTGTGAGCCGAGATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR CCA 90 bp CTAGTCCAACAGTCACCACCAGAAGCTCTGATCCAGGCTGTCCCCCTGGGCGGGAATCGTCTTCTGAGATaGATGTTGGCTGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: LVQQSPPEALIQAVPLGGNRLLR*MLAAPT
Trigger: AGTTGGAGCAGCCAACATCCATCTCAGAAGACGATT...CCCGCCCAGGGGGACAGCCTGGATCAGAGCTTCTGGTGGTGACTGTTGGACTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CAA 72 bp ACACTCAGCACCAGGTGTACTCGCCGCGGAAGAGACTaGGGGATCCAGTCTGAAATCAGCTGCCCATTACGA +
Preference number: 4 (lower is better)
Translates to: TLSTRCTRRGRD*GIQSEISCPLR
Trigger: TCGTAATGGGCAGCTGATTTCAGACTGGATCCCCAAGTCTCTTCCGCGGCGAGTACACCTGGTGCTGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CAA 72 bp CCATCTATCCGGCCCACAGCCACAATCTTCCCAGGTTaGTTGAATGCCAAACTACAGACAGAGGGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: PSIRPTATIFPG*LNAKLQTEGPG
Trigger: CCCCGGACCCTCTGTCTGTAGTTTGGCATTCAACAAACCTGGGAAGATTGTGGCTGTGGGCCGGATAGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CAA 72 bp TGTGACTGGGCCACTGTGTCCCTGGAGAGTACGTATTaGGCACACCAACAGGGGATGCCACAACTTTGTGGC +
Preference number: 4 (lower is better)
Translates to: CDWATVSLESTY*AHQQGMPQLCG
Trigger: GCCACAAAGTTGTGGCATCCCCTGTTGGTGTGCCAAATACGTACTCTCCAGGGACACAGTGGCCCAGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
CDS-3UTR TCA 90 bp CACACCCTGATGGTCCCACACTTTCAAGGTCCCATCTCGGCTCACAGATACAATGCTTGCCACCAAGCCTaGCAACCTGAGTTCAGTCCC +
Preference number: 4 (lower is better)
Translates to: HTLMVPHFQGPISAHRYNACHQA*QPEFSP
Trigger: GGGACTGAACTCAGGTTGTCAGGCTTGGTGGCAAGC...ATTGTATCTGTGAGCCGAGATGGGACCTTGAAAGTGTGGGACCATCAGGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227526.2
CDS-3UTR GCA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTCGGCCGGAGAGACGGTaGCTGTGTCTTTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTRPERR*LCLSWG
Trigger: CCCCCAGGAAAGACACAGGCACCGTCTCTCCGGCCG...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR GCA 90 bp GGCAACTTCGGAAGGTGCCCGAGGCATCAGGATCACACGTCTTCCAGAGGTGAGAAATCTCGCTCCCCATaGATGTCACGGAAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: GNFGRCPRHQDHTSSRGEKSRSP*MSRKVD
Trigger: ATCCACTTTCCGTGACATGCATGGGGAGCGAGATTT...CTCACCTCTGGAAGACGTGTGATCCTGATGCCTCGGGCACCTTCCGAAGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR CCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTCTTTTGAGGGCGGGGTaGCTGGCGGGACCGCCTCTT +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASLLRAG*LAGPPL
Trigger: AAGAGGCGGTCCCGCCAGCCACCCCGCCCTCAAAAG...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp GTTTCCTTGTGTGTCTCCCACAGCAAGCTGCAGGGGAGAGCTGGGCTCCATCCAAGGTTTCCAGGCATCTaGCACAGAGCTAAGGAAATC +
Preference number: 4 (lower is better)
Translates to: VSLCVSHSKLQGRAGLHPRFPGI*HRAKEI
Trigger: GATTTCCTTAGCTCTGTGCCAGATGCCTGGAAACCT...TGGATGGAGCCCAGCTCTCCCCTGCAGCTTGCTGTGGGAGACACACAAGGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR CCA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGTGACTGACGCGGCCTaGAGCCTGTGCGGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTVTDAA*SLCGSH
Trigger: GTGGCTACCGCACAGGCTCCAGGCCGCGTCAGTCAC...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
3UTR CAA 72 bp CTGCTCTTTGCCCATTCGGGGAGAAGGCCACAGCAGTaGGGGATGAGGACATTGTCAGAGACAAGCTTTGCT +
Preference number: 4 (lower is better)
Translates to: LLFAHSGRRPQQ*GMRTLSETSFA
Trigger: AGCAAAGCTTGTCTCTGACAATGTCCTCATCCCCAACTGCTGTGGCCTTCTCCCCGAATGGGCAAAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CAA 72 bp AAACTACAGACAGAGGGTCCGGGGGCCCCTAGTTCCTaGGTGACTTTGAGTCCATCTGCCTGGAAGAAGGTA +
Preference number: 4 (lower is better)
Translates to: KLQTEGPGAPSS*VTLSPSAWKKV
Trigger: TACCTTCTTCCAGGCAGATGGACTCAAAGTCACCAAGGAACTAGGGGCCCCCGGACCCTCTGTCTGTAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR TCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCAGGAGGCCCTTGTGAGTaGCTCTTGGGACAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTAGGPCE*LLGQSL
Trigger: CAGGCTCTGTCCCAAGAGTCACTCACAAGGGCCTCC...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp ATACAAGTTTCCTTGTGTGTCTCCCACAGCAAGCTGCAGGGGAGAGCTGGGCTCTCGGTATCCATCCTTTaGCCAAACAGGATGACCCTG +
Preference number: 4 (lower is better)
Translates to: IQVSLCVSHSKLQGRAGLSVSIL*PNRMTL
Trigger: CAGGGTCATCCTGTTTGGTCAAAGGATGGATACCGA...GAGCCCAGCTCTCCCCTGCAGCTTGCTGTGGGAGACACACAAGGAAACTTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR TCA 90 bp GCTGTGACTGGGCCACTGTGTCCCTGGAGAGTACGTATTTGGCACACCAACAGGGGAAAGTGGATGAAATaGAAAGCCGGATATTGCGCC +
Preference number: 4 (lower is better)
Translates to: AVTGPLCPWRVRIWHTNRGKWMK*KAGYCA
Trigger: GGCGCAATATCCGGCTTTTCATTTCATCCACTTTCC...CCTGTTGGTGTGCCAAATACGTACTCTCCAGGGACACAGTGGCCCAGTCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR TCA 90 bp CTCTGGGTGGAAGGCAACGCAGTTGAGAGACTTTGGATGGGTGTACTGAAAAGCGATCTCGGAAGTAGATaGGAGCTTGGGCCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LWVEGNAVERLWMGVLKSDLGSR*ELGPKA
Trigger: AGCCTTCGGCCCAAGCTCTCATCTACTTCCGAGATC...GCTTTTCAGTACACCCATCCAAAGTCTCTCAACTGCGTTGCCTTCCACCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR GCA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGGCGGTCCCCACAGCTaGTCTTTGCCCATTCGGGGA +
Preference number: 4 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTGGPHS*SLPIRG
Trigger: TCCCCGAATGGGCAAAGAGCAGCTGTGGGGACCGCC...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTCCTGTGGCTACCACCTaGCCCTCTGGGTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASPVATT*PSGWKA
Trigger: TGCCTTCCACCCAGAGGGGCAGGTGGTAGCCACAGG...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCAACCATCCGGTGCCCATaGCACAGCAGTGATGGCCAC +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTATIRCP*HSSDGH
Trigger: GTGGCCATCACTGCTGTGGCATGGGCACCGGATGGT...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp AAAATACAAGTTTCCTTGTGTGTCTCCCACAGCAAGCTGCAGGGGAGAGCTGGGAACAAGCCCAGCAGCTaGATACTGGGTCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: KIQVSLCVSHSKLQGRAGNKPSS*ILGLSH
Trigger: GTGGGAGAGACCCAGTATGCAGCTGCTGGGCTTGTT...CCCAGCTCTCCCCTGCAGCTTGCTGTGGGAGACACACAAGGAAACTTGTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226222.2
CDS-3UTR CCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTAGCCCAGGCAACCCCTaGGCCGGCCAAGAAATCCTG +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASSPGNP*AGQEIL
Trigger: CAGGATTTCTTGGCCGGCCCAGGGGTTGCCTGGGCT...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCAAGCAGCTGCTGTGACTaGGCCACTGTGTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTASSCCD*ATVSLE
Trigger: CTCCAGGGACACAGTGGCCCAGTCACAGCAGCTGCT...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCAGCTGCAGGGGAGAGCTaGGCTCCATCCAAGGTTCCA +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTAAAGES*APSKVP
Trigger: TGGAACCTTGGATGGAGCCCAGCTCTCCCCTGCAGC...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
3UTR CAA 72 bp CTTGAACCCTGCTTTGCCAGCAGCAGCCGCATCTGGTaGTTAAAAGGTGACTCCTCCAGTCGTTTCCCATAC +
Preference number: 4 (lower is better)
Translates to: LEPCFASSSRIW*LKGDSSSRFPY
Trigger: GTATGGGAAACGACTGGAGGAGTCACCTTTTAACAACCAGATGCGGCTGCTGCTGGCAAAGCAGGGTTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR TCA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCCATGGTGGCGGGCACTaGTCCCAGTCCGCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LTKNIDTGVFRLAASVDIHGGGH*SQSAAG
Trigger: ACCTGCTGCGGACTGGGATCAGTGCCCGCCACCATG...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTTGCTGCACTGTATCCTaGAGAAGGCGTGGCCGTGCC +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASCCTVS*RRRGRA
Trigger: GGCACGGCCACGCCTTCTTCAGGATACAGTGCAGCA...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR TCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTAAGCAGCAGCTGCTGTaGCTGGGCCACTGTGTCCCT +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASKQQLL*LGHCVP
Trigger: AGGGACACAGTGGCCCAGTCACAGCAGCTGCTGCTT...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp AGAGTACGTATTTGGCACACCAACAGGGGATGCCACAACTTTGTGGCCCCATCTCCAAGCCTGACAACCTaGGTTCAGTCCCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: RVRIWHTNRGCHNFVAPSPSLTT*VQSQDV
Trigger: AACATCCTGGGACTGAACTCAGGTTGTCAGGCTTGG...AGATGGGGCCACAAAGTTGTGGCATCCCCTGTTGGTGTGCCAAATACGTACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227526.2
CDS-3UTR GCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCCGGCCGGAGAGACGGTaGCTGTGTCTTTCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIIRPERR*LCLSWG
Trigger: CCCCCAGGAAAGACACAGGCACCGTCTCTCCGGCCG...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR GCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCACCAGGCTGCAGGTGCTaGTTCTGGATCATGCTCCAC +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTAPGCRC*FWIMLH
Trigger: GTGGAGCATGATCCAGAAGCAGCACCTGCAGCCTGG...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR GCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTGCCCCAGGCTGCAGGTaGTGCTTCTGGATCATGCTC +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASAPGCR*CFWIML
Trigger: GAGCATGATCCAGAAGCAGCACCTGCAGCCTGGGGC...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR GCA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCCCCAGGCTGCAGGTaGTGCTTCTGGATCATGCTC +
Preference number: 4 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTAPGCR*CFWIML
Trigger: GAGCATGATCCAGAAGCAGCACCTGCAGCCTGGGGC...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR GCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTGGCTGGCTAGCTGCCTaGTGGAGCAGGAGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASGWLAA*WSRSKG
Trigger: TCCTTTGCTCCTGCTCCAGCAGGCAGCTAGCCAGCC...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTCCCACAGCTGCTCTTTaGCCATTCGGGGAGAAGGCC +
Preference number: 4 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTPTAAL*PFGEKA
Trigger: GGCCTTCTCCCCGAATGGGCAAAGAGCAGCTGTGGG...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCTGCTGCCAGCCCAGCTaGCTGTGGCTACCACCTGCC +
Preference number: 4 (lower is better)
Translates to: LTKNIDTGVFRLAASVDICCQPS*LWLPPA
Trigger: GGCAGGTGGTAGCCACAGGCAGCTGGGCTGGCAGCA...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCGACACAGCCACACTGTaGAGGGAAGGCCGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIIDTATL*REGRQP
Trigger: CGGCTGGCGGCCTTCCCTGCACAGTGTGGCTGTGTC...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCCAAGTTGCTGCCCTaGCTCTGGGTTCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTAKLLP*LWVPES
Trigger: GGACTCTGGAACCCAGAGGCAGGGCAGCAACTTGGC...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCAGGAGGTCAGGGAGCATaGTCAGGCACCGGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTAGGQGA*SGTGSS
Trigger: TGAAGAACCGGTGCCTGACCATGCTCCCTGACCTCC...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp CCACACCCTGATGGTCCCACACTTTCAAGGTCCCATCTCGGCTCACAGATACAACAGGAAGATCATAGCTaGGGGGAATGTAGCCATAGC +
Preference number: 4 (lower is better)
Translates to: PHPDGPTLSRSHLGSQIQQEDHS*GECSHS
Trigger: GCTATGGCTACATTCCCCCCAGCTATGATCTTCCTG...TTGTATCTGTGAGCCGAGATGGGACCTTGAAAGTGTGGGACCATCAGGGTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR CCA 90 bp CACACCAACAGGGGATGCCACAACTTTGTGGCCCCATCTAGTCCAACAGTCACCATGCTCCACACATCCTaGAGAACCAACTGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: HTNRGCHNFVAPSSPTVTMLHTS*RTNCPN
Trigger: GTTTGGACAGTTGGTTCTCCAGGATGTGTGGAGCAT...GGTGACTGTTGGACTAGATGGGGCCACAAAGTTGTGGCATCCCCTGTTGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR CCA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTATCCTGAAGAAGGCGTaGCCGTGCCGGACTCGTTGG +
Preference number: 4 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTILKKA*PCRTRW
Trigger: CCAACGAGTCCGGCACGGCCACGCCTTCTTCAGGAT...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR CCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCACGGGCTGCTGCAAAGTaGAAGAAAACGAACGGGGGC +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTARAAAK*KKTNGG
Trigger: GCCCCCGTTCGTTTTCTTCCACTTTGCAGCAGCCCG...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATTGCTGCCCTGCCTCTaGGTTCCAGAGTCCCACAGA +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTALLPCL*VPESHR
Trigger: TCTGTGGGACTCTGGAACCCAGAGGCAGGGCAGCAA...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTCTGATGGGTCCGGAATaGGCAGGGATGCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASLMGPE*AGMLVS
Trigger: GCTGACCAGCATCCCTGCCCATTCCGGACCCATCAG...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCAGTACAATGGCAGGCTTaGACCCTGCTTTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTAVQWQA*TLLCQQ
Trigger: CTGCTGGCAAAGCAGGGTTCAAGCCTGCCATTGTAC...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTTCAGGCAGCAGCCAGTaGTTTGGTACTGGTGGGCCT +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASSGSSQ*FGTGGP
Trigger: AGGCCCACCAGTACCAAATCACTGGCTGCTGCCTGA...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTTGCCTCCATCAGGGCTaGAGCTACAGCAGCACACTG +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASCLHQG*SYSSTL
Trigger: CAGTGTGCTGCTGTAGCTTCAGCCCTGATGGAGGCA...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCACAGGACGAGAAAGTGTaGATCAGGAGAGGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTAQDEKV*IRRGAW
Trigger: CCAAGCCCCTCTCCTGATTCACACTTTCTCGTCCTG...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCCAGCTGCACACTGGCTaGTGGGTCCGGAATGGGCAG +
Preference number: 4 (lower is better)
Translates to: LTKNIDTGVFRLAASVDIQLHTG*WVRNGQ
Trigger: CTGCCCATTCCGGACCCATCAGCCAGTGTGCAGCTG...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTGCACATGGAGGGCTGTaGCAGAGCCCAAGTGGATCT +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASAHGGL*QSPSGS
Trigger: AGATCCACTTGGGCTCTGTCACAGCCCTCCATGTGC...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCGTCAGGGTGCACAGGTaGTTCCGACTGGCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIIVRVHR*FRLAGL
Trigger: GAGGCCTGCCAGTCGGAAGCACCTGTGCACCCTGAC...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCACATTGTCTGGCCTTGTaGAGCCTCAGTTTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTAHCLAL*SLSFSR
Trigger: GCGGGAGAAACTGAGGCTGCACAAGGCCAGACAATG...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp GTTTCCTTGTGTGTCTCCCACAGCAAGCTGCAGGGGAGAGCTGGGCTCCATCCACACTTGGAATTCACATaGTGCCAGATAATCTGTTTG +
Preference number: 4 (lower is better)
Translates to: VSLCVSHSKLQGRAGLHPHLEFT*CQIICL
Trigger: CAAACAGATTATCTGGCAGCATGTGAATTCCAAGTG...TGGATGGAGCCCAGCTCTCCCCTGCAGCTTGCTGTGGGAGACACACAAGGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR GCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCACACTCTGGCCTGCAGTaGGGGCAGAACAGATCTCAT +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTAHSGLQ*GQNRSH
Trigger: ATGAGATCTGTTCTGCCCGCACTGCAGGCCAGAGTG...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR GCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCGGCAGGCTTGAACCCTaGTTTGCCAGCAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIIGRLEP*FASSSR
Trigger: GCGGCTGCTGCTGGCAAAGCAGGGTTCAAGCCTGCC...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCAGTGCTCAGGATGTGCTaGAAGAGCAGTGGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTAVLRMC*KSSGRV
Trigger: CACTCTCCCACTGCTCTTGCAGCACATCCTGAGCAC...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCGGGCTCCAGAGCAGCTaGACACTGGCTGATGGGTCC +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIIGLQSS*TLADGS
Trigger: GGACCCATCAGCCAGTGTGCAGCTGCTCTGGAGCCC...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCTCTCCCACAGCAAGCTaGAGGGGAGAGCTGGGCTCC +
Preference number: 4 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVSPTAS*RGELGS
Trigger: GGAGCCCAGCTCTCCCCTGCAGCTTGCTGTGGGAGA...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCCCGCTCCCAGGTCTCTaGCCTTCGGAGCTTCATCCG +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIIPLPGL*PSELHP
Trigger: CGGATGAAGCTCCGAAGGCCAGAGACCTGGGAGCGG...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTTGGCTGCTCCAACTaGGCCCCAGGCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFVGCSN*APGCRC
Trigger: GCACCTGCAGCCTGGGGCCCAGTTGGAGCAGCCAAC...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR CCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCACAGCAGCCAGTGATTTaGTACTGGTGGGCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTAQQPVI*YWWALV
Trigger: GACCAAGGCCCACCAGTACCAAATCACTGGCTGCTG...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCCTCCCAAACACACAGTaGCCAGCAGGCGGCGGTCTG +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIILPNTQ*PAGGGL
Trigger: CAGACCGCCGCCTGCTGGCCACTGTGTGTTTGGGAG...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
3UTR CAA 72 bp ATGACAGGACGAGAAAGTGTGAATCAGGAGAGGGGCTaGGGCTATCTTCATGTCCCAGCAAAGGAGATTCCG +
Preference number: 4 (lower is better)
Translates to: MTGRESVNQERG*GYLHVPAKEIP
Trigger: CGGAATCTCCTTTGCTGGGACATGAAGATAGCCCAAGCCCCTCTCCTGATTCACACTTTCTCGTCCTGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
3UTR CAA 72 bp TACGTATTTGGCACACCAACAGGGGATGCCACAACTTaGTGGCCCCATCTAGTCCAACAGTCACCACCAGAA +
Preference number: 4 (lower is better)
Translates to: YVFGTPTGDATT*WPHLVQQSPPE
Trigger: TTCTGGTGGTGACTGTTGGACTAGATGGGGCCACAAAGTTGTGGCATCCCCTGTTGGTGTGCCAAATACGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000226430.2
ENSMUST00000227526.2
CDS-3UTR TCA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCCCCCACGAACAGCTGTaGGTTCTCCACCTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: LTKNIDTGVFRLAASVDIPHEQL*VLHLPK
Trigger: CTTGGGGAGGTGGAGAACTCACAGCTGTTCGTGGGG...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR GCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCAACTGGGCCCCAGGCTaGAGGTGCTGCTTCTGGATC +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIINWAPG*RCCFWI
Trigger: GATCCAGAAGCAGCACCTGCAGCCTGGGGCCCAGTT...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR GCA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCCCAGGCCTCTGTAAGTaGTGGGGAGGGCACTCAGCT +
Preference number: 4 (lower is better)
Translates to: LTKNIDTGVFRLAASVDIPGLCK*WGGHSA
Trigger: AGCTGAGTGCCCTCCCCAGCACTTACAGAGGCCTGG...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCGGAATGGGCAGGGATaGTGGTCAGCTCCACACCCT +
Preference number: 4 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVRNGQG*WSAPHP
Trigger: AGGGTGTGGAGCTGACCAGCATCCCTGCCCATTCCG...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp CCACACCCTGATGGTCCCACACTTTCAAGGTCCCATCTCGGCTCACAGATACAATCTCAGAATGTTTCTTaGCTCTGGGATGGTAGGATG +
Preference number: 4 (lower is better)
Translates to: PHPDGPTLSRSHLGSQIQSQNVS*LWDGRM
Trigger: CATCCTACCATCCCAGAGCCAAGAAACATTCTGAGA...TTGTATCTGTGAGCCGAGATGGGACCTTGAAAGTGTGGGACCATCAGGGTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227526.2
CDS-3UTR TCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTCGGAGCTTCATCCGCTaGCCAGCTCTGCTAGACTCC +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFRSFIR*PALLDS
Trigger: GGAGTCTAGCAGAGCTGGTCAGCGGATGAAGCTCCG...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCAGTTTCTCCCGCTTaGGCTGCTCATACATCACAG +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTASVSPA*AAHTSQ
Trigger: CTGTGATGTATGAGCAGCTCAAGCGGGAGAAACTGA...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCACGGCATTTGCATCTGTaGGATAGACCAAGAGGGTTC +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTARHLHL*DRPRGF
Trigger: GAACCCTCTTGGTCTATCTCACAGATGCAAATGCCG...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTCAGGGGAGGCCCTTGTaGGTGACTCTTGGGACAGAG +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFQGRPL*VTLGTE
Trigger: CTCTGTCCCAAGAGTCACTCACAAGGGCCTCCCCTG...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTAGCTCTCCCAGTTTTTaGCGCAGATGGGTACAGAGG +
Preference number: 4 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTSSPSF*RRWVQR
Trigger: CCTCTGTACCCATCTGCGTCAAAAACTGGGAGAGCT...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR TCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTAGCTCTCCCAGTTTTTaGCGCAGATGGGTACAGAGG +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASSSPSF*RRWVQR
Trigger: CCTCTGTACCCATCTGCGTCAAAAACTGGGAGAGCT...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR TCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGGTCTCACCCAGGCCTaGGTCACTGGACACACTCAG +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFGLTQA*VTGHTQ
Trigger: CTGAGTGTGTCCAGTGACTCAGGCCTGGGTGAGACC...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGGCAGCAAACAGGTaGCTCTTCAGGCTGGCTAGC +
Preference number: 4 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVLAANR*LFRLAS
Trigger: GCTAGCCAGCCTGAAGAGTCACCTGTTTGCTGCCAG...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTTGGTGGGCCTTGGTCTaGAACACCCAACAACCATGT +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASWWALV*NTQQPC
Trigger: ACATGGTTGTTGGGTGTTTCAGACCAAGGCCCACCA...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTAACAGCCACAGGGAATaGAGGGAGTCTCCCTTGAAC +
Preference number: 4 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTNSHRE*RESPLN
Trigger: GTTCAAGGGAGACTCCCTTCATTCCCTGTGGCTGTT...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCGCCACAGTCTCACAGTaGAGTCCTCTGAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIIATVSQ*SPLRQQ
Trigger: CTGCTGCCTCAGAGGACTTCACTGTGAGACTGTGGC...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCTCCACGCACAGCCAGTaGTCCAGTCACGATGACAGG +
Preference number: 4 (lower is better)
Translates to: LTKNIDTGVFRLAASVDISTHSQ*SSHDDR
Trigger: CCTGTCATCGTGACTGGATCACTGGCTGTGCGTGGA...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCACCACGGTTCAGGAATTaGATCACCTCCATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTAPRFRN*ITSISV
Trigger: GACAGAGATGGAGGTGATGCAATTCCTGAACCGTGG...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR GCA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGGCAGACACAAGGGATaGCAGAAAGGCAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTGRHKG*QKGSLS
Trigger: GGAAAGACTGCCTTTCTGGCATCCCTTGTGTCTGCC...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTTTGAGGAGCAACTTCTaGTGCAGTTCCCACACCAGG +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASLRSNF*CSSHTR
Trigger: CCTGGTGTGGGAACTGCAGCAGAAGTTGCTCCTCAA...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCGGCAACTTCGGAAGGTaGCCGAGGCATCAGGATCAC +
Preference number: 4 (lower is better)
Translates to: LTKNIDTGVFRLAASVDIGNFGR*PRHQDH
Trigger: GTGATCCTGATGCCTCGGGCACCTTCCGAAGTTGCC...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCGAGAACTGGCCAAGTTaGTGCCCTGCCTCTGGGTTC +
Preference number: 4 (lower is better)
Translates to: LTKNIDTGVFRLAASVDIENWPS*CPASGF
Trigger: GAACCCAGAGGCAGGGCAGCAACTTGGCCAGTTCTC...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCGCCACAGCCTTGGCTTaGTGCCACAGTGTCAGTTCC +
Preference number: 4 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVATALA*CHSVSS
Trigger: GGAACTGACACTGTGGCAGCAAGCCAAGGCTGTGGC...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp TTTCCTTGTGTGTCTCCCACAGCAAGCTGCAGGGGAGAGCTGGGCTCCATCCAACGAAGCTTTTTACACTaGTGTGCCTTTAAATTTGTG +
Preference number: 4 (lower is better)
Translates to: FPCVSPTASCRGELGSIQRSFLH*CAFKFV
Trigger: CACAAATTTAAAGGCACAGCAGTGTAAAAAGCTTCG...TTGGATGGAGCCCAGCTCTCCCCTGCAGCTTGCTGTGGGAGACACACAAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226222.2
CDS-3UTR CCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCGGAGGTCAGGGAGCATaGTCAGGCACCGATTCTCCA +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIIGGQGA*SGTDSP
Trigger: TGGAGAATCGGTGCCTGACCATGCTCCCTGACCTCC...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTATGGGGGCGGCAGGCTaGCAAGAGGGCAGCCACAGC +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASMGAAG*QEGSHS
Trigger: GCTGTGGCTGCCCTCTTGCCAGCCTGCCGCCCCCAT...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTCAAATTTGTCGGTCATaGCAGCTCGGAGACAGGCAG +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASQICRS*QLGDRQ
Trigger: CTGCCTGTCTCCGAGCTGCCATGACCGACAAATTTG...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCACAGGAAGATCATAGCTaGGGGGAATGTAGCCATAGC +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTAQEDHS*GECSHS
Trigger: GCTATGGCTACATTCCCCCCAGCTATGATCTTCCTG...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR CCA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCGGTAAATTGTCCCACTaGCGGTCCCCACAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LTKNIDTGVFRLAASVDIGKLSH*RSPQLL
Trigger: GAGCAGCTGTGGGGACCGCCAGTGGGACAATTTACC...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCACCTGCCCCTCTGGGTaGAAGGCAACGCAGTTGAGA +
Preference number: 4 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVTCPSG*KATQLR
Trigger: TCTCAACTGCGTTGCCTTCCACCCAGAGGGGCAGGT...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCGATCCCTGCCAGCTGTaGCCAAGATGCCTCCATCAG +
Preference number: 4 (lower is better)
Translates to: LTKNIDTGVFRLAASVDIDPCQL*PRCLHQ
Trigger: CTGATGGAGGCATCTTGGCCACAGCTGGCAGGGATC...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCCTCACGGCACTCTGGTaGCCTGAGAACTGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIILTALW*PENWPS
Trigger: ACTTGGCCAGTTCTCAGGCCACCAGAGTGCCGTGAG...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCAGAGCAGCTGCACACTaGCTGATGGGTCCGGAATGG +
Preference number: 4 (lower is better)
Translates to: LTKNIDTGVFRLAASVDIRAAAH*LMGPEW
Trigger: CCATTCCGGACCCATCAGCCAGTGTGCAGCTGCTCT...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATTTCACATTCACATTTaGGGCCAGAGCAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTAFHIHI*GQSRAE
Trigger: CTCTGCTCTGCTCTGGCCTCAAATGTGAATGTGAAA...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTGTTTCCCATTGTCTATaGGCTCCTCCCACACAGAAG +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASVSHCL*APPTQK
Trigger: CTTCTGTGTGGGAGGAGCTCATAGACAATGGGAAAC...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTGGAAACTGCCGACTGTaGACCACAGATTTCTCATGC +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASGNCRL*TTDFSC
Trigger: GCATGAGAAATCTGTGGTTCACAGTCGGCAGTTTCC...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTTCGGTATCCATCCTTTaGCCAAACAGGATGACCCTG +
Preference number: 4 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTSVSIL*PNRMTL
Trigger: CAGGGTCATCCTGTTTGGTCAAAGGATGGATACCGA...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR TCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTATATCTCTTCAGCTCTaGGACCCGATGTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASISLQL*DPMCSF
Trigger: GAAGCTGCACATCGGGTCTCAGAGCTGAAGAGATAT...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR TCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTCTGGTTGTTAAAAGGTaGCTCCTCCAGTCGTTTCCC +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASLVVKR*LLQSFP
Trigger: GGGAAACGACTGGAGGAGTCACCTTTTAACAACCAG...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTCCTGTTCATACAGTGTaGAGAGCCTCAGGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTPVHTV*RASGSQ
Trigger: CTGACTACCTGAGGCTCTTCACACTGTATGAACAGG...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCAGGGCAGTCAAAGCCTaGGGAAGGACATCATGGCCA +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIIRAVKA*GRTSWP
Trigger: TGGCCATGATGTCCTTCCTCAGGCTTTGACTGCCCT...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGGTCAGGGCGGGCTaGTGCAAAGTGGAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVLVRAG*CKVEEN
Trigger: GTTTTCTTCCACTTTGCAGCAGCCCGCCCTGACCAG...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTCCTCCCCTAGTAAACTaGGTAGACTCTGGACAAGGT +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASPPLVN*VDSGQG
Trigger: ACCTTGTCCAGAGTCTACGCAGTTTACTAGGGGAGG...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTTTCAGGCTGGCTAGCTaGCTGCTGGAGCAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFFRLAS*LLEQEQ
Trigger: TTGCTCCTGCTCCAGCAGGCAGCTAGCCAGCCTGAA...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTACAGCCTTGGCTTGCTaGCACAGTGTCAGTTCCCCG +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFTALAC*HSVSSP
Trigger: CGGGGAACTGACACTGTGGCAGCAAGCCAAGGCTGT...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTAAATCCAACTCTGAGTaGGGGGACAACTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASKSNSE*GDNSVS
Trigger: GGAGACAGAGTTGTCCCCGCACTCAGAGTTGGATTT...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226222.2
CDS-3UTR CCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTGGATTTCAGGGCCCTaGGTCCAGGTGGAAGGTCTA +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIIWISGP*VQVEGL
Trigger: TAGACCTTCCACCTGGACCCAGGGCCCTGAAATCCA...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCAAGGTTTCCAGGCATCTaGCACAGAGCTAAGGAAATC +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTARFPGI*HRAKEI
Trigger: GATTTCCTTAGCTCTGTGCCAGATGCCTGGAAACCT...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR CCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCAATGCTCCACACATCCTaGAGAACCAACTGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTAMLHTS*RTNCPN
Trigger: GTTTGGACAGTTGGTTCTCCAGGATGTGTGGAGCAT...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR CCA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCTACCCAACAGCCACCTaGTCACCGTCTGGGTTGAGA +
Preference number: 4 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVYPTAT*SPSGLR
Trigger: TCTCAACCCAGACGGTGACCAGGTGGCTGTTGGGTA...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCCCCAGCACAGGCTTCTaGTATCTCGACAACAGCCAC +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIIPSTGF*YLDNSH
Trigger: GTGGCTGTTGTCGAGATACCAGAAGCCTGTGCTGGG...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCGGGCCACTGTGTCCCTaGAGAGTACGTATTTGGCAC +
Preference number: 4 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVGPLCP*RVRIWH
Trigger: GTGCCAAATACGTACTCTCCAGGGACACAGTGGCCC...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTTTCCAGACAGCTCACTaGCCCTTCACATCGGAACAA +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASFQTAH*PFTSEQ
Trigger: TTGTTCCGATGTGAAGGGCCAGTGAGCTGTCTGGAA...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGACCAAACAGGATaGCCCTGTCAATGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIIFDQTG*PCQWGS
Trigger: GGACCCCCATTGACAGGGTCATCCTGTTTGGTCAAA...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR TCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGATCTCGGAAGTAGATaGGAGCTTGGGCCGAAGGCT +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFDLGSR*ELGPKA
Trigger: AGCCTTCGGCCCAAGCTCTCATCTACTTCCGAGATC...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR TCA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTTGGGGATCCAGTCTaGAATCAGCTGCCCATTACG +
Preference number: 4 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVLGDPV*NQLPIT
Trigger: CGTAATGGGCAGCTGATTTCAGACTGGATCCCCAAG...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTCACAAGCTGAGCCCTTaGAGATGGGACCAAAGAGCC +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFHKLSP*RWDQRA
Trigger: GGCTCTTTGGTCCCATCTTCAAGGGCTCAGCTTGTG...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCAGAGGTGAGCTGCAATaGGGACATGCGCAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIIRGELQ*GHAQSS
Trigger: AGAAGACTGCGCATGTCCTCATTGCAGCTCACCTCT...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCAGCTCCACACCCTaGTGGTCCCACACTTTCAAG +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFVSSTP*WSHTFK
Trigger: CTTGAAAGTGTGGGACCATCAGGGTGTGGAGCTGAC...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGGGTGGACAGATATATaGCCATCTATTCTCTCCGTG +
Preference number: 4 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTGWTDI*PSILSV
Trigger: CACGGAGAGAATAGATGGGCATATATCTGTCCACCC...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp AGTCAGGAACCGGTCTCCAGCATGCAAGAAAAGAACAGCAGAGACACAGCCACATTGGAATTCACATGCTaGCAGATAATCTGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: SQEPVSSMQEKNSRDTATLEFTC*QIICLA
Trigger: AGCCAAACAGATTATCTGGCAGCATGTGAATTCCAA...TGTGGCTGTGTCTCTGCTGTTCTTTTCTTGCATGCTGGAGACCGGTTCCTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR GCA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTAAATCTCGCTCCCCATaGATGTCACGGAAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTKSRSP*MSRKVD
Trigger: ATCCACTTTCCGTGACATGCATGGGGAGCGAGATTT...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR GCA 90 bp CATTCCCAAGATAGAAAATACAAGTTTCCTTGTGTGTCTCCCACAGCAAGCTGCCCACGGTTCAGGAATTaGATCACCTCCATCTCTGTC +
Preference number: 4 (lower is better)
Translates to: HSQDRKYKFPCVSPTASCPRFRN*ITSISV
Trigger: GACAGAGATGGAGGTGATGCAATTCCTGAACCGTGG...GCAGCTTGCTGTGGGAGACACACAAGGAAACTTGTATTTTCTATCTTGGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR GCA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCAAGATCAGCCATGTaGTCAGGATTGCATGTAGCT +
Preference number: 4 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTARSAM*SGLHVA
Trigger: AGCTACATGCAATCCTGAGCACATGGCTGATCTTGC...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTAACCGGTCTCCAGCATaGAAGAAAAGAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTNRSPA*KKRTAE
Trigger: CTCTGCTGTTCTTTTCTTGCATGCTGGAGACCGGTT...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp TTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTTCAAAATCCAACTCTGAGTaGGGGGACAACTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: FRLAASVDIIFVLSTASSKSNSE*GDNSVS
Trigger: GGAGACAGAGTTGTCCCCGCACTCAGAGTTGGATTT...TGAAGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226222.2
CDS-3UTR GCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTAACAAGCCCAGCAGCTaGATACTGGGTCTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFNKPSS*ILGLSH
Trigger: GTGGGAGAGACCCAGTATGCAGCTGCTGGGCTTGTT...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226222.2
CDS-3UTR CCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGAGAGGATGTCTGAATaGCCAGGCACATGCCCACAG +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFERMSE*PGTCPQ
Trigger: CTGTGGGCATGTGCCTGGCCATTCAGACATCCTCTC...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCGGAGGTCAGAGAGCATaGTCAGACACTGGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVGGQRA*SDTGSP
Trigger: TGGAGAACCAGTGTCTGACCATGCTCTCTGACCTCC...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCCTTGTGAGTGACTCTTaGGACAGAGCCTGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIILVSDS*DRACRH
Trigger: ATGCCGACAGGCTCTGTCCCAAGAGTCACTCACAAG...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCTCAATGGGGGTCCTTTaGACAGCCAGAGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: LTKNIDTGVFRLAASVDISMGVL*TARDSR
Trigger: TCTGCTGTCTCTGGCTGTCCAAAGGACCCCCATTGA...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR CCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCAAATCGTCTTCTGAGATaGATGTTGGCTGCTCCAACT +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTANRLLR*MLAAPT
Trigger: AGTTGGAGCAGCCAACATCCATCTCAGAAGACGATT...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR CCA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCGCCGCGGAAGAGACTTaGGGATCCAGTCTGAAATCA +
Preference number: 4 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVAAEET*GSSLKS
Trigger: TGATTTCAGACTGGATCCCCAAGTCTCTTCCGCGGC...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATGTCTCAGGAAGGTATaGAAAACAGCAACATCTGCC +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTACLRKV*KTATSA
Trigger: GGCAGATGTTGCTGTTTTCCATACCTTCCTGAGACA...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCGGTACTGGTGGGCCTTaGTCTGAAACACCCAACAAC +
Preference number: 4 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVGTGGP*SETPNN
Trigger: GTTGTTGGGTGTTTCAGACCAAGGCCCACCAGTACC...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCTACCGCATGCACATGTaGCTGTGTCAGCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVYRMHM*LCQQLS
Trigger: AGACAGCTGCTGACACAGCCACATGTGCATGCGGTA...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTAATGGGCAGGGATGCTaGTCAGCTCCACACCCTGAT +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFNGQGC*SAPHPD
Trigger: ATCAGGGTGTGGAGCTGACCAGCATCCCTGCCCATT...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTGAAAGGACGTCTGGATaGCTAGACATATGTCCACAT +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASERTSG*LDICPH
Trigger: ATGTGGACATATGTCTAGTCATCCAGACGTCCTTTC...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCGCTACTTCCTGGACTTaGGCTGTAGCAGACATGGAT +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIIATSWT*AVADMD
Trigger: ATCCATGTCTGCTACAGCTCAAGTCCAGGAAGTAGC...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTTTGGAGACACACCATTaGCCCAAGGCTACTTCCTGG +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFLETHH*PKATSW
Trigger: CCAGGAAGTAGCCTTGGGTCAATGGTGTGTCTCCAA...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTGTGATGCTTTGCTTCTaGGCTGAGCCTCAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASVMLCF*AEPQVY
Trigger: ATAAACTTGAGGCTCAGCTCAGAAGCAAAGCATCAC...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCATTGGAAGGGAAGGGTaGTGCTTTGCTTCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIIIGREG*CFASEL
Trigger: CAGCTCAGAAGCAAAGCATCACCCTTCCCTTCCAAT...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTTTTGACCAAACAGGATaGCCCTGTCAATGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFFDQTG*PCQWGS
Trigger: GGACCCCCATTGACAGGGTCATCCTGTTTGGTCAAA...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR TCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCAACTCCTAGGTTTGTATaGATCATCTGCTTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTATPRFV*IICFLW
Trigger: CCAAAGGAAGCAGATGATTCATACAAACCTAGGAGT...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTCCTCTTTCATCAAGATaGGAGACTGGCCATCAGGGG +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFPLSSR*ETGHQG
Trigger: CCCCTGATGGCCAGTCTCTCATCTTGATGAAAGAGG...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGGCTGGTCAATGCAGTaGTCTTTACAGTGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFGWSMQ*SLQWGE
Trigger: CTCTCCCCACTGTAAAGAGCACTGCATTGACCAGCC...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTCTTCTCATCCCCTTCTaGCAGGCTCTGGTAGAACTC +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFLLIPF*QALVEL
Trigger: GAGTTCTACCAGAGCCTGGCAGAAGGGGATGAGAAG...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTATCGGGGATAGGTTGTaGTTTACTGAGAGGTTCACA +
Preference number: 4 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTIGDRL*FTERFT
Trigger: TGTGAACCTCTCAGTAAAGCACAACCTATCCCCGAT...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCGTTCTTGCTCCAAGGTaGTCAGGATGTGCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: LTKNIDTGVFRLAASVDIVLAPR*SGCAAR
Trigger: TCTTGCAGCACATCCTGAGCACCTTGGAGCAAGAAC...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTTTGAACATCCAACCATaGAGGGATCCATCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTLNIQP*RDPSSA
Trigger: TGCAGAAGATGGATCCCTGCATGGTTGGATGTTCAA...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTACAGATTTCTCATGCTaGAGTCTCTGGAGAACGAGT +
Preference number: 4 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTTDFSC*SLWRTS
Trigger: ACTCGTTCTCCAGAGACTCCAGCATGAGAAATCTGT...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTCAACAAAGAGGCACTTaGAATTCACATGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASQQRGT*NSHAAR
Trigger: TCTGGCAGCATGTGAATTCCAAGTGCCTCTTTGTTG...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR CCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTATCAGGAGAGGGGCTTaGGCTATCTTCATGTCCCAG +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFIRRGA*AIFMSQ
Trigger: CTGGGACATGAAGATAGCCCAAGCCCCTCTCCTGAT...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTCCTGCAGATAGAAGATaGAATAGACCCAGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTPADRR*NRPRLH
Trigger: ATGAAGCCTGGGTCTATTCCATCTTCTATCTGCAGG...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp AAAATACAAGTTTCCTTGTGTGTCTCCCACAGCAAGCTGCAGGGGAGAGCTGGGGTGCCTTTAAATTTGTaGGATCAATCCAGCAATCAA +
Preference number: 4 (lower is better)
Translates to: KIQVSLCVSHSKLQGRAGVPLNL*DQSSNQ
Trigger: TTGATTGCTGGATTGATCCCACAAATTTAAAGGCAC...CCCAGCTCTCCCCTGCAGCTTGCTGTGGGAGACACACAAGGAAACTTGTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000226222.2
CDS-3UTR TCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTCTTGAGCCTGAAGTTTaGTGGCAGTCTTCAGGATGC +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFLEPEV*WQSSGC
Trigger: GCATCCTGAAGACTGCCATCAAACTTCAGGCTCAAG...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR TCA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCGGAAAGTGGATGAAATaGAAAGCCGGATATTGCGCC +
Preference number: 4 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVGKWMK*KAGYCA
Trigger: GGCGCAATATCCGGCTTTTCATTTCATCCACTTTCC...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR GCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCCCGAGCATACAAAGATaGCTTAAGGATGAACTCCGG +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIIPSIQR*LKDELR
Trigger: CCGGAGTTCATCCTTAAGGCATCTTTGTATGCTCGG...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCAGTCTGAAATCAGCTaGCCATTACGATCCACCAAC +
Preference number: 4 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVQSEIS*PLRSTN
Trigger: GTTGGTGGATCGTAATGGGCAGCTGATTTCAGACTG...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCACAGCCTTCTCCTCCTaGCAGGTTTTCAAGTTCAAC +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIITAFSS*QVFKFN
Trigger: GTTGAACTTGAAAACCTGGCAGGAGGAGAAGGCTGT...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCACCATAACTGAGCCTTaGCATCTTCTCCAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: LTKNIDTGVFRLAASVDITITEP*HLLQQS
Trigger: TGACTGCTGGAGAAGATGGCAAGGCTCAGTTATGGT...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTGAAAGGATGTCTGAGTaGACAGATCTATGTCCATGT +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASERMSE*TDLCPC
Trigger: ACATGGACATAGATCTGTCCACTCAGACATCCTTTC...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCAAGAGTAGCTAGACATTaGTTTTCCAAAGAAAGGACG +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTARVARH*FSKERT
Trigger: CGTCCTTTCTTTGGAAAACCAATGTCTAGCTACTCT...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCAGAAATTCCTTTTCTTTaGAGACACACCATTGACCCA +
Preference number: 4 (lower is better)
Translates to: GVFRLAASVDIIFVLSTAEIPFL*RHTIDP
Trigger: TGGGTCAATGGTGTGTCTCCAAAGAAAAGGAATTTC...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTTCATGCTGGAGTCTCTaGAGAACGAGTTCATGGTGG +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFSCWSL*RTSSWW
Trigger: CCACCATGAACTCGTTCTCCAGAGACTCCAGCATGA...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTCCAGGCCTGAGTCACTaGACACACTCAGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASPGLSH*THSAPG
Trigger: ACCTGGTGCTGAGTGTGTCCAGTGACTCAGGCCTGG...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCAGGAGCAAAGGATACTaGGTAAGGAGTGAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVRSKGY*VRSEAC
Trigger: ACAGGCTTCACTCCTTACCCAGTATCCTTTGCTCCT...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGATGCCACAACTTTGTaGCCCCATCTAGTCCAACAG +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFDATTL*PHLVQQ
Trigger: CTGTTGGACTAGATGGGGCCACAAAGTTGTGGCATC...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTAATCCCGGAAGCACATaGAGGGCTGTGACAGAGCCC +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASNPGST*RAVTEP
Trigger: GGGCTCTGTCACAGCCCTCCATGTGCTTCCGGGATT...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
3UTR CAA 72 bp GATACTGGGGACCCATTAGGATTATTTAAGTTCAGATaGAAGTCCAGGATCTCTTCAAACTCCCCTGACTCC +
Preference number: 4 (lower is better)
Translates to: DTGDPLGLFKFR*KSRISSNSPDS
Trigger: GGAGTCAGGGGAGTTTGAAGAGATCCTGGACTTCAATCTGAACTTAAATAATCCTAATGGGTCCCCAGTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR TCA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCGCTTTGCTTCTGAGCTaGGCCTCAAGTTTATCGATA +
Preference number: 4 (lower is better)
Translates to: LTKNIDTGVFRLAASVDIALLLS*ASSLSI
Trigger: TATCGATAAACTTGAGGCTCAGCTCAGAAGCAAAGC...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTAGAGACAAGCTTTGCTaGCCCTTCAGGGTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASRDKLC*PFRVWG
Trigger: ACCCCAGACCCTGAAGGGTCAGCAAAGCTTGTCTCT...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTAGGCCCCTGGGAACCTaGAGAAATCTTGTAGATGTT +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFRPLGT*RNLVDV
Trigger: AACATCTACAAGATTTCTTCAGGTTCCCAGGGGCCT...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCCTCTTCAAACTCCCCTaGCTCCTTTTGCTCCAATAT +
Preference number: 4 (lower is better)
Translates to: LTKNIDTGVFRLAASVDILFKLP*LLLLQY
Trigger: ATATTGGAGCAAAAGGAGTCAGGGGAGTTTGAAGAG...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCCTAGTTTTCAGGCTATaGAGATCAGCTTGTGCCGTA +
Preference number: 4 (lower is better)
Translates to: LTKNIDTGVFRLAASVDILVFRL*RSACAV
Trigger: TACGGCACAAGCTGATCTGCATAGCCTGAAAACTAG...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGAGCCTGTCGGCATTTaGATCTGTGAGATAGACCAA +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFEPVGI*ICEIDQ
Trigger: TTGGTCTATCTCACAGATGCAAATGCCGACAGGCTC...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCATCCACCAACTTATCTaGCCCATCGATGATAAGGAC +
Preference number: 4 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVIHQLI*PIDDKD
Trigger: GTCCTTATCATCGATGGGGCAGATAAGTTGGTGGAT...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCACCCACTTCCAGATATaGAGCAACCACATGGAGATT +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIITHFQI*SNHMEI
Trigger: AATCTCCATGTGGTTGCTGCATATCTGGAAGTGGGT...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCAGTGTCCGAAAGGAATaGAAAAGAGGAAATCCCGTC +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIISVRKE*KRGNPV
Trigger: GACGGGATTTCCTCTTTTGCATTCCTTTCGGACACT...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTTCATCAATGTTGTATTaGAAGGGAAGGGTGATGCTT +
Preference number: 4 (lower is better)
Translates to: VFRLAASVDIIFVLSTASSSMLY*KGRVML
Trigger: AAGCATCACCCTTCCCTTCCAATACAACATTGATGA...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCAACAAAGAGGCACTTaGAATTCACATGCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVQQRGT*NSHAAR
Trigger: TCTGGCAGCATGTGAATTCCAAGTGCCTCTTTGTTG...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR CCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGGTTTCCACTGTGACTaGCAGCCAGCACTTCTTCCC +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASGFHCD*QPALLP
Trigger: GGGAAGAAGTGCTGGCTGCCAGTCACAGTGGAAACC...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGACAAGGTAGGCAAATaGACACAAGGGGAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFDKVGK*TQGERV
Trigger: AACCCTTTCCCCTTGTGTCCATTTGCCTACCTTGTC...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCATCATCTGCTTCCTTTaGTATCTGCCAGAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVIICFL*YLPELY
Trigger: GTACAGCTCTGGCAGATACCAAAGGAAGCAGATGAT...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCACATTTCCCTCTCTCTaGAAATGGACGTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIITFPSL*KWTFCL
Trigger: AAGACAGAACGTCCATTTTCAGAGAGAGGGAAATGT...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTAAAGGGTTTCCACTGTaGCTGGCAGCCAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASKGFPL*LAASTS
Trigger: AGAAGTGCTGGCTGCCAGTCACAGTGGAAACCCTTT...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCCGGGTAAGGTCAGATaGATCTTTCACATTCACATT +
Preference number: 4 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVPGKVR*IFHIHI
Trigger: AATGTGAATGTGAAAGATGCATCTGACCTTACCCGG...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTCAGGGCGGGCTGCTaGAAAGTGGAAGAAAACGAA +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASVRAGC*KVEENE
Trigger: TTCGTTTTCTTCCACTTTGCAGCAGCCCGCCCTGAC...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTCTTCCAGAGGTGAGCTaGAATGAGGACATGCGCAGT +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASLPEVS*NEDMRS
Trigger: ACTGCGCATGTCCTCATTGCAGCTCACCTCTGGAAG...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTCATCTATTCTCTCCGTaGGCTGGAGGTCAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASHLFSP*AGGQRA
Trigger: TGCTCTCTGACCTCCAGCCCACGGAGAGAATAGATG...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCTTCCTCAGAGAAACATaGAGTCTTCTTGGTAGGAAG +
Preference number: 4 (lower is better)
Translates to: LTKNIDTGVFRLAASVDIFLRET*SLLGRK
Trigger: CTTCCTACCAAGAAGACTCCATGTTTCTCTGAGGAA...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTCAATCCAGCAATCAATaGAAAAATCCAACTCTGAGT +
Preference number: 4 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTQSSNQ*KNPTLS
Trigger: ACTCAGAGTTGGATTTTTCCATTGATTGCTGGATTG...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226222.2
CDS-3UTR TCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCACGGAAAGTGGATaGAATGAAAAGCCGGATATT +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFVTESG*NEKPDI
Trigger: AATATCCGGCTTTTCATTTCATCCACTTTCCGTGAC...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR TCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTTTTGGCCTGAGTGATTaGTACTGGGGACCCATTAGG +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASFGLSD*YWGPIR
Trigger: CCTAATGGGTCCCCAGTATCAATCACTCAGGCCAAA...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGGGGCCACTCATCATTaGCTTCTAACTCCTGGACTT +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASGATHH*LLTPGL
Trigger: AAGTCCAGGAGTTAGAAGGCAATGATGAGTGGCCCC...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR CCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTTTGTACTTAGCTAGCTaGTACTCATCAAACTCGGCA +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFLYLAS*YSSNSA
Trigger: TGCCGAGTTTGATGAGTACCAGCTAGCTAAGTACAA...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTAGCAGCAGCCGCATCTaGTTGTTAAAAGGTGACTCC +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASSSSRI*LLKGDS
Trigger: GGAGTCACCTTTTAACAACCAGATGCGGCTGCTGCT...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTTATGCAGCAACCACATaGAGATTGGTAAGAAACTCG +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFYAATT*RLVRNS
Trigger: CGAGTTTCTTACCAATCTCCATGTGGTTGCTGCATA...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTCTGGGAGCTTCTGGTTaGCTTCAGGCTTTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASLGASG*LQALKK
Trigger: CTTCTTCAAAGCCTGAAGCCAACCAGAAGCTCCCAG...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTAATCCTGACCATAACTaGGCCTTGCCATCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASNPDHN*ALPSSP
Trigger: TGGAGAAGATGGCAAGGCTCAGTTATGGTCAGGATT...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR TCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTAGAACTCTCTTCAGATaGAGACTGGAACTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASRTLFR*RLELVD
Trigger: GTCCACCAGTTCCAGTCTTCATCTGAAGAGAGTTCT...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTCACTTGGAATTCACATaGTGCCAGATAATCTGTTTG +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFHLEFT*CQIICL
Trigger: CAAACAGATTATCTGGCAGCATGTGAATTCCAAGTG...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR GCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTCAGGGATCCATCTTCTaGACCACTCACCAAAACACT +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASQGSIF*TTHQNT
Trigger: AGTGTTTTGGTGAGTGGTGCAGAAGATGGATCCCTG...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTATTAAGGAATCTGAATaGAAACTGCCGACTGTGAAC +
Preference number: 4 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFIKESE*KLPTVN
Trigger: GTTCACAGTCGGCAGTTTCCATTCAGATTCCTTAAT...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCCAATCCAGCAATCAATaGAAAAATCCAACTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LTKNIDTGVFRLAASVDIQSSNQ*KNPTLS
Trigger: ACTCAGAGTTGGATTTTTCCATTGATTGCTGGATTG...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226222.2
CDS-3UTR CCA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCGTGCCTTTAAATTTGTaGGATCAATCCAGCAATCAA +
Preference number: 4 (lower is better)
Translates to: TKNIDTGVFRLAASVDIIVPLNL*DQSSNQ
Trigger: TTGATTGCTGGATTGATCCCACAAATTTAAAGGCAC...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226222.2
CDS-3UTR TCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGCTGGTGCACAGTATTaGAGAATGTACTCCATACCT +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASAGAQY*RMYSIP
Trigger: AGGTATGGAGTACATTCTTCAATACTGTGCACCAGC...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTTCTTCAGATGAAGACTaGAACTGGTGGACGTTGAAC +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASSSDED*NWWTLN
Trigger: GTTCAACGTCCACCAGTTCCAGTCTTCATCTGAAGA...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
3UTR CAA 72 bp TCCTTCGAAGCTTTTTACACTGCTGTGCCTTTAAATTaGTGGGATCAATCCAGCAATCAATGGAAAAATCCA +
Preference number: 4 (lower is better)
Translates to: SFEAFYTAVPLN*WDQSSNQWKNP
Trigger: TGGATTTTTCCATTGATTGCTGGATTGATCCCACAAATTTAAAGGCACAGCAGTGTAAAAAGCTTCGAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR CCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTACTGTACAAAGGCATTaGGACTTCTGTGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASTVQRH*DFCAFF
Trigger: GAAGAAAGCACAGAAGTCCCAATGCCTTTGTACAGT...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTTTGGAATTCACATGCTaGCAGATAATCTGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASLEFTC*QIICLA
Trigger: AGCCAAACAGATTATCTGGCAGCATGTGAATTCCAA...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR GCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTTCCCCTGACTCCTTTTaGTCCAATATAGAAAGTAAT +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASSPDSF*SNIESN
Trigger: ATTACTTTCTATATTGGAGCAAAAGGAGTCAGGGGA...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR GCA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTTTTCTCTGGCATTaGATTATAAGCTGCTTCAAA +
Preference number: 4 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASVFLWH*IISCFK
Trigger: TTTGAAGCAGCTTATAATGCAATGCCAGAGAAAAAC...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS GCA 90 bp CTGGTCAGGGCGGGCTGCAGAAAGGCAGTCTTTCCCTGTCCTGCCTaGCCAGTCACTAGGCTCAGCCTCCCATGGGGCAGCAACAGCTGC +
Preference number: 5 (lower is better)
Translates to: LVRAGCRKAVFPCPA*PVTRLSLPWGSNSC
Trigger: GCAGCTGTTGCTGCCCCATGGGAGGCTGAGCCTAGTGACTGGGCAGGCAGGACAGGGAAAGACTGCCTTTCTGCAGCCCGCCCTGACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS TCA 90 bp CTGCGGGTCTCTTCCTCTGTGATACCCCAGCGCAGGTCAATGGCGTaGAGACTGATGCGGTGGGGGAACACTCTGGCCTGCAGTGCGGGC +
Preference number: 5 (lower is better)
Translates to: LRVSSSVIPQRRSMA*RLMRWGNTLACSAG
Trigger: GCCCGCACTGCAGGCCAGAGTGTTCCCCCACCGCATCAGTCTTCACGCCATTGACCTGCGCTGGGGTATCACAGAGGAAGAGACCCGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS TCA 90 bp AGGCTCAGCCTCCCATGGGGCAGCAACAGCTGCTGCACTGTATCCTaGAGAAGGCGTGGCCGTGCCGGACTCGTTGGGGTCTTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RLSLPWGSNSCCTVS*RRRGRAGLVGVFSC
Trigger: GCAGCTGAAGACCCCAACGAGTCCGGCACGGCCACGCCTTCTTCAGGATACAGTGCAGCAGCTGTTGCTGCCCCATGGGAGGCTGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR CAA 90 bp GCTGATGGGTCCGGAATGGGCAGGGATGCTGGTCAGCTCCACACCCTGATGGTCGAAGTAGATGAGAGCTaGGGCCGAAGGCTGCGAGCG +
Preference number: 5 (lower is better)
Translates to: ADGSGMGRDAGQLHTLMVEVDES*GRRLRA
Trigger: CGCTCGCAGCCTTCGGCCCAAGCTCTCATCTACTTC...GACCATCAGGGTGTGGAGCTGACCAGCATCCCTGCCCATTCCGGACCCATCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS CCA 90 bp CCCATGGGGCAGCAACAGCTGCTGCACTGTATCCTGAAGAAGGCGTaGCCGTGCCGGACTCGTTGGGGTCTTCAGCTGCTGAAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: PMGQQQLLHCILKKA*PCRTRWGLQLLKAG
Trigger: ACCAGCTTTCAGCAGCTGAAGACCCCAACGAGTCCGGCACGGCCACGCCTTCTTCAGGATACAGTGCAGCAGCTGTTGCTGCCCCATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS GCA 90 bp TTGAGCTGCTCATACATCACAGGTATAGTCATTGCTGCCCGAAGCTaGCGGCGCGTCAGGGTGCACAGGTGCTTCCGACTGGCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: LSCSYITGIVIAARS*RRVRVHRCFRLAGL
Trigger: GAGGCCTGCCAGTCGGAAGCACCTGTGCACCCTGACGCGCCGGCAGCTTCGGGCAGCAATGACTATACCTGTGATGTATGAGCAGCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS GCA 90 bp GCTGCTCCAACTGGGCCCCAGGCTGCAGGTGCTGCTTCTGGATCATaGTCCACACATCCTGGAGAACCAACTGTCCAAACTCCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: AAPTGPQAAGAASGS*STHPGEPTVQTPPG
Trigger: GCCTGGAGGAGTTTGGACAGTTGGTTCTCCAGGATGTGTGGAGCATGATCCAGAAGCAGCACCTGCAGCCTGGGGCCCAGTTGGAGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS GCA 90 bp GGGCAGCAACAGCTGCTGCACTGTATCCTGAAGAAGGCGTGGCCGTaGCGGACTCGTTGGGGTCTTCAGCTGCTGAAAGCTGGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: GQQQLLHCILKKAWP*RTRWGLQLLKAGLD
Trigger: ATCCAGACCAGCTTTCAGCAGCTGAAGACCCCAACGAGTCCGGCACGGCCACGCCTTCTTCAGGATACAGTGCAGCAGCTGTTGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS GCA 90 bp GCGTCTGAGGAGGTTGAGAGCAAGACACTGGTCAGGGCGGGCTGCTaGAAAGTGGAAGAAAACGAACGGGGGCTCATTGGGCTGGTCAGG +
Preference number: 5 (lower is better)
Translates to: ASEEVESKTLVRAGC*KVEENERGLIGLVR
Trigger: CCTGACCAGCCCAATGAGCCCCCGTTCGTTTTCTTCCACTTTGCAGCAGCCCGCCCTGACCAGTGTCTTGCTCTCAACCTCCTCAGACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS GCA 90 bp GAGGCGTCTGAGGAGGTTGAGAGCAAGACACTGGTCAGGGCGGGCTaGTGCAAAGTGGAAGAAAACGAACGGGGGCTCATTGGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: EASEEVESKTLVRAG*CKVEENERGLIGLV
Trigger: GACCAGCCCAATGAGCCCCCGTTCGTTTTCTTCCACTTTGCAGCAGCCCGCCCTGACCAGTGTCTTGCTCTCAACCTCCTCAGACGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 90 bp GTGAACAATGGCGGAGTAATACCGTCGTACATGGGGGCGGCAGGCTaGCAAGAGGGCAGCCACAGCCAGAACTGTATTGGCGATGTCCCG +
Preference number: 5 (lower is better)
Translates to: VNNGGVIPSYMGAAG*QEGSHSQNCIGDVP
Trigger: CGGGACATCGCCAATACAGTTCTGGCTGTGGCTGCCCTCTTGCCAGCCTGCCGCCCCCATGTACGACGGTATTACTCCGCCATTGTTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 90 bp CAGGGCGGGCTGCTGCAAAGTGGAAGAAAACGAACGGGGGCTCATTaGGCTGGTCAGGGACCTTCAGGGCAGACACAAGGGATGCCAGAA +
Preference number: 5 (lower is better)
Translates to: QGGLLQSGRKRTGAH*AGQGPSGQTQGMPE
Trigger: TTCTGGCATCCCTTGTGTCTGCCCTGAAGGTCCCTGACCAGCCCAATGAGCCCCCGTTCGTTTTCTTCCACTTTGCAGCAGCCCGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 90 bp CGCAGATGGGTACAGAGGCGTCTGAGGAGGTTGAGAGCAAGACACTaGTCAGGGCGGGCTGCTGCAAAGTGGAAGAAAACGAACGGGGGC +
Preference number: 5 (lower is better)
Translates to: RRWVQRRLRRLRARH*SGRAAAKWKKTNGG
Trigger: GCCCCCGTTCGTTTTCTTCCACTTTGCAGCAGCCCGCCCTGACCAGTGTCTTGCTCTCAACCTCCTCAGACGCCTCTGTACCCATCTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 90 bp CGCAGATGGGTACAGAGGCGTCTGAGGAGGTTGAGAGCAAGACACTaGTCAGGGCGGGCTGCAGAAAGGCAGTCTTTCCCTGTCCTGCCT +
Preference number: 5 (lower is better)
Translates to: RRWVQRRLRRLRARH*SGRAAERQSFPVLP
Trigger: AGGCAGGACAGGGAAAGACTGCCTTTCTGCAGCCCGCCCTGACCAGTGTCTTGCTCTCAACCTCCTCAGACGCCTCTGTACCCATCTGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR CAA 90 bp TGTGTGTCTCCCACAGCAAGCTGCAGGGGAGAGCTGGGCTCCATCCAAGGTTCCGTCAATGGGGGTCCTTaGGACAGCCAGAGACAGCAG +
Preference number: 5 (lower is better)
Translates to: CVSPTASCRGELGSIQGSVNGGP*DSQRQQ
Trigger: CTGCTGTCTCTGGCTGTCCAAAGGACCCCCATTGAC...GGAACCTTGGATGGAGCCCAGCTCTCCCCTGCAGCTTGCTGTGGGAGACACACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS GCA 90 bp CAGTTTCTCCCGCTTGAGCTGCTCATACATCACAGGTATAGTCATTaGTGCCCGAAGCTGCCGGCGCGTCAGGGTGCACAGGTGCTTCCG +
Preference number: 5 (lower is better)
Translates to: QFLPLELLIHHRYSH*CPKLPARQGAQVLP
Trigger: CGGAAGCACCTGTGCACCCTGACGCGCCGGCAGCTTCGGGCAGCAATGACTATACCTGTGATGTATGAGCAGCTCAAGCGGGAGAAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS GCA 90 bp AGAGCTTGGGCCGAAGGCTGCGAGCGTTGGCCACGGTTCAGGAATTaGATCACCTCCATCTCTGTCACGGATCGCCCTGAAGGGTACTCA +
Preference number: 5 (lower is better)
Translates to: RAWAEGCERWPRFRN*ITSISVTDRPEGYS
Trigger: TGAGTACCCTTCAGGGCGATCCGTGACAGAGATGGAGGTGATGCAATTCCTGAACCGTGGCCAACGCTCGCAGCCTTCGGCCCAAGCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CCA 90 bp AGGAGGTTGAGAGCAAGACACTGGTCAGGGCGGGCTGCTGCAAAGTaGAAGAAAACGAACGGGGGCTCATTGGGCTGGTCAGGGACCTTC +
Preference number: 5 (lower is better)
Translates to: RRLRARHWSGRAAAK*KKTNGGSLGWSGTF
Trigger: GAAGGTCCCTGACCAGCCCAATGAGCCCCCGTTCGTTTTCTTCCACTTTGCAGCAGCCCGCCCTGACCAGTGTCTTGCTCTCAACCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp GCAGGAGAAAGAGGAAGAGAGCCCAGGCAACCCCTGGGCCGGCCAAGAAATCCTAAGGCACACTTCCAGTaGTCTGTTCCTGCGGGTCTC +
Preference number: 5 (lower is better)
Translates to: AGERGREPRQPLGRPRNPKAHFQ*SVPAGL
Trigger: GAGACCCGCAGGAACAGACAACTGGAAGTGTGCCTT...AGGATTTCTTGGCCGGCCCAGGGGTTGCCTGGGCTCTCTTCCTCTTTCTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS CCA 90 bp GGTAGAACTCGGCTACCTGGATCCAGTCTGAAGGCAGGTGAACAATaGCGGAGTAATACCGTCGTACATGGGGGCGGCAGGCTGGCAAGA +
Preference number: 5 (lower is better)
Translates to: GRTRLPGSSLKAGEQ*RSNTVVHGGGRLAR
Trigger: TCTTGCCAGCCTGCCGCCCCCATGTACGACGGTATTACTCCGCCATTGTTCACCTGCCTTCAGACTGGATCCAGGTAGCCGAGTTCTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 90 bp GGCGTGGCCGTGCCGGACTCGTTGGGGTCTTCAGCTGCTGAAAGCTaGTCTGGATCAAATCGTCTTCTGAGATGGATGTTGGCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: GVAVPDSLGSSAAES*SGSNRLLRWMLAAP
Trigger: TGGAGCAGCCAACATCCATCTCAGAAGACGATTTGATCCAGACCAGCTTTCAGCAGCTGAAGACCCCAACGAGTCCGGCACGGCCACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CCA 90 bp GGAGCAACTTCTGCTGCAGTTCCCACACCAGGCCTCTGTAAGTGCTaGGGAGGGCACTCAGCTCTCCCAGTTTTTGACGCAGATGGGTAC +
Preference number: 5 (lower is better)
Translates to: GATSAAVPTPGLCKC*GGHSALPVFDADGY
Trigger: GTACCCATCTGCGTCAAAAACTGGGAGAGCTGAGTGCCCTCCCCAGCACTTACAGAGGCCTGGTGTGGGAACTGCAGCAGAAGTTGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp GTTTCCTTGTGTGTCTCCCACAGCAAGCTGCAGGGGAGAGCTGGGCTCCATCCAAGGCGTCTGAGGAGGTaGAGAGCAAGACACTGGTCA +
Preference number: 5 (lower is better)
Translates to: VSLCVSHSKLQGRAGLHPRRLRR*RARHWS
Trigger: TGACCAGTGTCTTGCTCTCAACCTCCTCAGACGCCT...TGGATGGAGCCCAGCTCTCCCCTGCAGCTTGCTGTGGGAGACACACAAGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS TCA 90 bp CCCTTCTGCCAGGCTCTGGTAGAACTCGGCTACCTGGATCCAGTCTaGAGGCAGGTGAACAATGGCGGAGTAATACCGTCGTACATGGGG +
Preference number: 5 (lower is better)
Translates to: PFCQALVELGYLDPV*RQVNNGGVIPSYMG
Trigger: CCCCATGTACGACGGTATTACTCCGCCATTGTTCACCTGCCTTCAGACTGGATCCAGGTAGCCGAGTTCTACCAGAGCCTGGCAGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS TCA 90 bp TGGGGTCTTCAGCTGCTGAAAGCTGGTCTGGATCAAATCGTCTTCTaGGATGGATGTTGGCTGCTCCAACTGGGCCCCAGGCTGCAGGTG +
Preference number: 5 (lower is better)
Translates to: WGLQLLKAGLDQIVF*DGCWLLQLGPRLQV
Trigger: CACCTGCAGCCTGGGGCCCAGTTGGAGCAGCCAACATCCATCTCAGAAGACGATTTGATCCAGACCAGCTTTCAGCAGCTGAAGACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CCA 90 bp ACCACAGATTTCTCATGCTGGAGTCTCTGGAGAACGAGTTCATGGTaGCGGGCACTGATCCCAGTCCGCAGCAGGTTACACAGGTTCCGG +
Preference number: 5 (lower is better)
Translates to: TTDFSCWSLWRTSSW*RALIPVRSRLHRFR
Trigger: CCGGAACCTGTGTAACCTGCTGCGGACTGGGATCAGTGCCCGCCACCATGAACTCGTTCTCCAGAGACTCCAGCATGAGAAATCTGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 90 bp CTGCTGCACTGTATCCTGAAGAAGGCGTGGCCGTGCCGGACTCGTTaGGGTCTTCAGCTGCTGAAAGCTGGTCTGGATCAAATCGTCTTC +
Preference number: 5 (lower is better)
Translates to: LLHCILKKAWPCRTR*GLQLLKAGLDQIVF
Trigger: GAAGACGATTTGATCCAGACCAGCTTTCAGCAGCTGAAGACCCCAACGAGTCCGGCACGGCCACGCCTTCTTCAGGATACAGTGCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CCA 90 bp GTCTGGATCAAATCGTCTTCTGAGATGGATGTTGGCTGCTCCAACTaGGCCCCAGGCTGCAGGTGCTGCTTCTGGATCATGCTCCACACA +
Preference number: 5 (lower is better)
Translates to: VWIKSSSEMDVGCSN*APGCRCCFWIMLHT
Trigger: TGTGTGGAGCATGATCCAGAAGCAGCACCTGCAGCCTGGGGCCCAGTTGGAGCAGCCAACATCCATCTCAGAAGACGATTTGATCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CCA 90 bp TCTTCAGCTGCTGAAAGCTGGTCTGGATCAAATCGTCTTCTGAGATaGATGTTGGCTGCTCCAACTGGGCCCCAGGCTGCAGGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: SSAAESWSGSNRLLR*MLAAPTGPQAAGAA
Trigger: AGCAGCACCTGCAGCCTGGGGCCCAGTTGGAGCAGCCAACATCCATCTCAGAAGACGATTTGATCCAGACCAGCTTTCAGCAGCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS TCA 90 bp CTTGTGAGTGACTCTTGGGACAGAGCCTGTCGGCATTTGCATCTGTaGGATAGACCAAGAGGGTTCGGCCAGGCATCGGGGATAGGTTGT +
Preference number: 5 (lower is better)
Translates to: LVSDSWDRACRHLHL*DRPRGFGQASGIGC
Trigger: ACAACCTATCCCCGATGCCTGGCCGAACCCTCTTGGTCTATCTCACAGATGCAAATGCCGACAGGCTCTGTCCCAAGAGTCACTCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS TCA 90 bp CATCATTCCGATCAGCAGCAGCACATAGTTCAGGGGAGGCCCTTGTaGGTGACTCTTGGGACAGAGCCTGTCGGCATTTGCATCTGTGAG +
Preference number: 5 (lower is better)
Translates to: HHSDQQQHIVQGRPL*VTLGTEPVGICICE
Trigger: CTCACAGATGCAAATGCCGACAGGCTCTGTCCCAAGAGTCACTCACAAGGGCCTCCCCTGAACTATGTGCTGCTGCTGATCGGAATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS GCA 90 bp TTCCATTGTCTGGCCTTGTGCAGCCTCAGTTTCTCCCGCTTGAGCTaGTCATACATCACAGGTATAGTCATTGCTGCCCGAAGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: FHCLALCSLSFSRLS*SYITGIVIAARSCR
Trigger: CCGGCAGCTTCGGGCAGCAATGACTATACCTGTGATGTATGAGCAGCTCAAGCGGGAGAAACTGAGGCTGCACAAGGCCAGACAATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 90 bp CGGAAAGTGGATGAAATGAAAAGCCGGATATTGCGCCATCCATGCTaGGAAATAGGACCCAAGGGACCAGGGATGTTCTCCTCCAGCGGC +
Preference number: 5 (lower is better)
Translates to: RKVDEMKSRILRHPC*EIGPKGPGMFSSSG
Trigger: GCCGCTGGAGGAGAACATCCCTGGTCCCTTGGGTCCTATTTCCCAGCATGGATGGCGCAATATCCGGCTTTTCATTTCATCCACTTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CCA 90 bp TCCACCAGCAAAAGGGCAGAGGGGCTTTCTTCTCAGAATGTTTCTTaGCTCTGGGATGGTAGGATGGCTCGGTGGGTAAAGCTGCTTGCC +
Preference number: 5 (lower is better)
Translates to: STSKRAEGLSSQNVS*LWDGRMARWVKLLA
Trigger: GGCAAGCAGCTTTACCCACCGAGCCATCCTACCATCCCAGAGCCAAGAAACATTCTGAGAAGAAAGCCCCTCTGCCCTTTTGCTGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227526.2
CDS GCA 90 bp ATTGGCGATGTCCCGGAGGTTAAGTTGCTGCCGAGCATACAAAGATaGCTTAAGGATGAACTCCGGTTCCAAGGAGGCCAGGGCACTACA +
Preference number: 5 (lower is better)
Translates to: IGDVPEVKLLPSIQR*LKDELRFQGGQGTT
Trigger: TGTAGTGCCCTGGCCTCCTTGGAACCGGAGTTCATCCTTAAGGCATCTTTGTATGCTCGGCAGCAACTTAACCTCCGGGACATCGCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS GCA 90 bp GCAGCCACAGCCAGAACTGTATTGGCGATGTCCCGGAGGTTAAGTTaGTGCCGAGCATACAAAGATGCCTTAAGGATGAACTCCGGTTCC +
Preference number: 5 (lower is better)
Translates to: AATARTVLAMSRRLS*CRAYKDALRMNSGS
Trigger: GGAACCGGAGTTCATCCTTAAGGCATCTTTGTATGCTCGGCAGCAACTTAACCTCCGGGACATCGCCAATACAGTTCTGGCTGTGGCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 90 bp GACCGCCTCTTGGACCGATGTTTCCGTGGGTTGTACTTAGCTAGCTaGTACTCATCAAACTCGGCAAATTTGTCGGTCATGGCAGCTCGG +
Preference number: 5 (lower is better)
Translates to: DRLLDRCFRGLYLAS*YSSNSANLSVMAAR
Trigger: CCGAGCTGCCATGACCGACAAATTTGCCGAGTTTGATGAGTACCAGCTAGCTAAGTACAACCCACGGAAACATCGGTCCAAGAGGCGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 90 bp AGCAAAAGGGCAGAGGGGCTTTCTTCTCAGAATGTTTCTTGGCTCTaGGATGGTAGGATGGCTCGGTGGGTAAAGCTGCTTGCCACCAAG +
Preference number: 5 (lower is better)
Translates to: SKRAEGLSSQNVSWL*DGRMARWVKLLATK
Trigger: CTTGGTGGCAAGCAGCTTTACCCACCGAGCCATCCTACCATCCCAGAGCCAAGAAACATTCTGAGAAGAAAGCCCCTCTGCCCTTTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227526.2
CDS TCA 90 bp TGGCTACTTTCAGGAGCTCGGTATCCATCCTTTGACCAAACAGGATaGCCCTGTCAATGGGGGTCCTTTGGACAGCCAGAGACAGCAGAT +
Preference number: 5 (lower is better)
Translates to: WLLSGARYPSFDQTG*PCQWGSFGQPETAD
Trigger: ATCTGCTGTCTCTGGCTGTCCAAAGGACCCCCATTGACAGGGTCATCCTGTTTGGTCAAAGGATGGATACCGAGCTCCTGAAAGTAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS GCA 90 bp AGGGAGCAGGCAGTTGCTAGTTTTCAGGCTATGCAGATCAGCTTGTaGCGTATGAGATATGTGAAGACCCTGGAGCAAGGGGCTGGTCAA +
Preference number: 5 (lower is better)
Translates to: REQAVASFQAMQISL*RMRYVKTLEQGAGQ
Trigger: TTGACCAGCCCCTTGCTCCAGGGTCTTCACATATCTCATACGGCACAAGCTGATCTGCATAGCCTGAAAACTAGCAACTGCCTGCTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS GCA 90 bp GCCACAGCCAGAACTGTATTGGCGATGTCCCGGAGGTTAAGTTGCTaGCGAGCATACAAAGATGCCTTAAGGATGAACTCCGGTTCCAAG +
Preference number: 5 (lower is better)
Translates to: ATARTVLAMSRRLSC*RAYKDALRMNSGSK
Trigger: CTTGGAACCGGAGTTCATCCTTAAGGCATCTTTGTATGCTCGGCAGCAACTTAACCTCCGGGACATCGCCAATACAGTTCTGGCTGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS GCA 90 bp TCACGGAAAGTGGATGAAATGAAAAGCCGGATATTGCGCCATCCATaGTGGGAAATAGGACCCAAGGGACCAGGGATGTTCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SRKVDEMKSRILRHP*WEIGPKGPGMFSSS
Trigger: GCTGGAGGAGAACATCCCTGGTCCCTTGGGTCCTATTTCCCAGCATGGATGGCGCAATATCCGGCTTTTCATTTCATCCACTTTCCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CCA 90 bp ACATCTCTGTCCTTCGAAGCTGTCACCAGCAATCCCGGAAGCACATaGAGGGCTGTGACAGAGCCCAAGTGGATCTTTTTACACTGCTGT +
Preference number: 5 (lower is better)
Translates to: TSLSFEAVTSNPGST*RAVTEPKWIFLHCC
Trigger: ACAGCAGTGTAAAAAGATCCACTTGGGCTCTGTCACAGCCCTCCATGTGCTTCCGGGATTGCTGGTGACAGCTTCGAAGGACAGAGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 90 bp TCTTCTCAGAATGTTTCTTGGCTCTGGGATGGTAGGATGGCTCGGTaGGTAAAGCTGCTTGCCACCAAGCCTGACAACCTGAGTTCAGTC +
Preference number: 5 (lower is better)
Translates to: SSQNVSWLWDGRMAR*VKLLATKPDNLSSV
Trigger: GACTGAACTCAGGTTGTCAGGCTTGGTGGCAAGCAGCTTTACCCACCGAGCCATCCTACCATCCCAGAGCCAAGAAACATTCTGAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227526.2
CDS-3UTR CAA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGAAGTAGATGAGAGCTaGGGCCGAAGGCTGCGAGCG +
Preference number: 5 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTEVDES*GRRLRA
Trigger: CGCTCGCAGCCTTCGGCCCAAGCTCTCATCTACTTC...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR CAA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGGCTTGAACCCTGCTTaGCCAGCAGCAGCCGCATCT +
Preference number: 5 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTGLNPA*PAAAAS
Trigger: AGATGCGGCTGCTGCTGGCAAAGCAGGGTTCAAGCC...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp CCACACCCTGATGGTCCCACACTTTCAAGGTCCCATCTCGGCTCACAGATACAAAGTATATGCAAGGCCTaGGGTTCAGTATCCACCAGC +
Preference number: 5 (lower is better)
Translates to: PHPDGPTLSRSHLGSQIQSICKA*GSVSTS
Trigger: GCTGGTGGATACTGAACCCAAGGCCTTGCATATACT...TTGTATCTGTGAGCCGAGATGGGACCTTGAAAGTGTGGGACCATCAGGGTGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227526.2
CDS TCA 90 bp CCTTCGAAGCTGTCACCAGCAATCCCGGAAGCACATGGAGGGCTGTaGCAGAGCCCAAGTGGATCTTTTTACACTGCTGTGCCTTTAAAT +
Preference number: 5 (lower is better)
Translates to: PSKLSPAIPEAHGGL*QSPSGSFYTAVPLN
Trigger: ATTTAAAGGCACAGCAGTGTAAAAAGATCCACTTGGGCTCTGTCACAGCCCTCCATGTGCTTCCGGGATTGCTGGTGACAGCTTCGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCTGGACGTTCTGTCTTTaGAGGGCGGGGTGGCTGGCG +
Preference number: 5 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVWTFCL*RAGWLA
Trigger: CGCCAGCCACCCCGCCCTCAAAAGACAGAACGTCCA...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGTCAATGGGGGTCCTTaGGACAGCCAGAGACAGCAG +
Preference number: 5 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTVNGGP*DSQRQQ
Trigger: CTGCTGTCTCTGGCTGTCCAAAGGACCCCCATTGAC...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR CAA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCACGAACGGGGGCTCATaGGGCTGGTCAGGGACCTTC +
Preference number: 5 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVTNGGS*GWSGTF
Trigger: GAAGGTCCCTGACCAGCCCAATGAGCCCCCGTTCGT...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCCCCCACAGCTGCTCTTaGCCCATTCGGGGAGAAGGC +
Preference number: 5 (lower is better)
Translates to: LTKNIDTGVFRLAASVDIPHSCS*PIRGEG
Trigger: GCCTTCTCCCCGAATGGGCAAAGAGCAGCTGTGGGG...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTAGCCACAGCCTTGGCTaGCTGCCACAGTGTCAGTTC +
Preference number: 5 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTSHSLG*LPQCQF
Trigger: GAACTGACACTGTGGCAGCAAGCCAAGGCTGTGGCT...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS TCA 90 bp CAGATAATCTGTTTGGCTACTTTCAGGAGCTCGGTATCCATCCTTTaGCCAAACAGGATGACCCTGTCAATGGGGGTCCTTTGGACAGCC +
Preference number: 5 (lower is better)
Translates to: QIICLATFRSSVSIL*PNRMTLSMGVLWTA
Trigger: GGCTGTCCAAAGGACCCCCATTGACAGGGTCATCCTGTTTGGTCAAAGGATGGATACCGAGCTCCTGAAAGTAGCCAAACAGATTATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR CAA 90 bp GGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATGGAAGGCAACGCAGTaGAGAGACTTTGGATGGGTG +
Preference number: 5 (lower is better)
Translates to: GVFRLAASVDIIFVLSTAWKATQ*RDFGWV
Trigger: CACCCATCCAAAGTCTCTCAACTGCGTTGCCTTCCA...TGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTGGTCACCGTCTGGGTaGAGAGCCACCGAGAGTGCA +
Preference number: 5 (lower is better)
Translates to: TKNIDTGVFRLAASVDIIWSPSG*RATESA
Trigger: TGCACTCTCGGTGGCTCTCAACCCAGACGGTGACCA...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTCAGGAGACCAGGATGTaGTCTTTGGTCCACGCACAG +
Preference number: 5 (lower is better)
Translates to: VFRLAASVDIIFVLSTASQETRM*SLVHAQ
Trigger: CTGTGCGTGGACCAAAGACAACATCCTGGTCTCCTG...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 90 bp ACCAGCAATCCCGGAAGCACATGGAGGGCTGTGACAGAGCCCAAGTaGATCTTTTTACACTGCTGTGCCTTTAAATTTGTGGGATCAATC +
Preference number: 5 (lower is better)
Translates to: TSNPGSTWRAVTEPK*IFLHCCAFKFVGSI
Trigger: GATTGATCCCACAAATTTAAAGGCACAGCAGTGTAAAAAGATCCACTTGGGCTCTGTCACAGCCCTCCATGTGCTTCCGGGATTGCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTAGGGGCCACTCATCATaGCCTTCTAACTCCTGGACT +
Preference number: 5 (lower is better)
Translates to: VFRLAASVDIIFVLSTASRGHSS*PSNSWT
Trigger: AGTCCAGGAGTTAGAAGGCAATGATGAGTGGCCCCT...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR CAA 90 bp AGTCAGGAACCGGTCTCCAGCATGCAAGAAAAGAACAGCAGAGACACAGCCACAGAGAGCGTCACATCGTaGGGATTCAAATTTGGTGAT +
Preference number: 5 (lower is better)
Translates to: SQEPVSSMQEKNSRDTATESVTS*GFKFGD
Trigger: ATCACCAAATTTGAATCCCAACGATGTGACGCTCTC...TGTGGCTGTGTCTCTGCTGTTCTTTTCTTGCATGCTGGAGACCGGTTCCTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR CAA 90 bp AATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCGCCGCGGAAGAGACTaGGGGATCCAGTCTGAAATC +
Preference number: 5 (lower is better)
Translates to: NIDTGVFRLAASVDIIFVRRGRD*GIQSEI
Trigger: GATTTCAGACTGGATCCCCAAGTCTCTTCCGCGGCG...GACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTCAGCTCTTAGTCTCCTaGGGCAAGATCAGCCATGTG +
Preference number: 5 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTQLLVS*GKISHV
Trigger: CACATGGCTGATCTTGCCCAAGGAGACTAAGAGCTG...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTTGTCAGAGACAAGCTTaGCTGACCCTTCAGGGTCTG +
Preference number: 5 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTCQRQA*LTLQGL
Trigger: CAGACCCTGAAGGGTCAGCAAAGCTTGTCTCTGACA...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTAGAAGGCCACAGCAGTaGGGGATGAGGACATTGTCA +
Preference number: 5 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTRRPQQ*GMRTLS
Trigger: TGACAATGTCCTCATCCCCAACTGCTGTGGCCTTCT...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTCTCAGTTTCTCCCGCTaGAGCTGCTCATACATCACA +
Preference number: 5 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTLSFSR*SCSYIT
Trigger: TGTGATGTATGAGCAGCTCAAGCGGGAGAAACTGAG...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCAAGGCACACTTCCAGTaGTCTGTTCCTGCGGGTCTC +
Preference number: 5 (lower is better)
Translates to: TKNIDTGVFRLAASVDIIKAHFQ*SVPAGL
Trigger: GAGACCCGCAGGAACAGACAACTGGAAGTGTGCCTT...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR CAA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCAGGCGTCTGAGGAGGTaGAGAGCAAGACACTGGTCA +
Preference number: 5 (lower is better)
Translates to: LTKNIDTGVFRLAASVDIRRLRR*RARHWS
Trigger: TGACCAGTGTCTTGCTCTCAACCTCCTCAGACGCCT...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR CAA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGCAGCAGCCAGTGATTaGGTACTGGTGGGCCTTGGT +
Preference number: 5 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFAAASD*VLVGLG
Trigger: ACCAAGGCCCACCAGTACCAAATCACTGGCTGCTGC...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTAGTTCCTTGGTGACTTaGAGTCCATCTGCCTGGAAG +
Preference number: 5 (lower is better)
Translates to: VFRLAASVDIIFVLSTASSSLVT*SPSAWK
Trigger: CTTCCAGGCAGATGGACTCAAAGTCACCAAGGAACT...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCACCAGGATGTTGTCTTaGGTCCACGCACAGCCAGTG +
Preference number: 5 (lower is better)
Translates to: LTKNIDTGVFRLAASVDITRMLS*VHAQPV
Trigger: CACTGGCTGTGCGTGGACCAAAGACAACATCCTGGT...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS GCA 90 bp TTCTGTAGGAGGACACCAACAAAGAGGCACTTGGAATTCACATGCTaGCAGATAATCTGTTTGGCTACTTTCAGGAGCTCGGTATCCATC +
Preference number: 5 (lower is better)
Translates to: FCRRTPTKRHLEFTC*QIICLATFRSSVSI
Trigger: GATGGATACCGAGCTCCTGAAAGTAGCCAAACAGATTATCTGGCAGCATGTGAATTCCAAGTGCCTCTTTGTTGGTGTCCTCCTACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR CAA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTCTTTCACATTCACATTaGAGGCCAGAGCAGAGCAGA +
Preference number: 5 (lower is better)
Translates to: VFRLAASVDIIFVLSTASLSHSH*RPEQSR
Trigger: TCTGCTCTGCTCTGGCCTCAAATGTGAATGTGAAAG...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTCCATTGTCTGGCCTaGTGCAGCCTCAGTTTCTCC +
Preference number: 5 (lower is better)
Translates to: TKNIDTGVFRLAASVDIIFHCLA*CSLSFS
Trigger: GGAGAAACTGAGGCTGCACAAGGCCAGACAATGGAA...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATAAGCACCCTGACTTaGCTGAAGGGTCTCACCCAG +
Preference number: 5 (lower is better)
Translates to: LTKNIDTGVFRLAASVDIISTLT*LKGLTQ
Trigger: CTGGGTGAGACCCTTCAGCAAAGTCAGGGTGCTTAT...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp ACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGGTTGGCTTCAGGCTTaGAAGAAGCATAGAGCACAT +
Preference number: 5 (lower is better)
Translates to: TGVFRLAASVDIIFVLSTGWLQA*KKHRAH
Trigger: ATGTGCTCTATGCTTCTTCAAAGCCTGAAGCCAACC...AGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGGGGCCCCTAGTTCCTaGGTGACTTTGAGTCCATCT +
Preference number: 5 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFGAPSS*VTLSPS
Trigger: AGATGGACTCAAAGTCACCAAGGAACTAGGGGCCCC...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGCGGTAGCCACAGCCTaGGCTTGCTGCCACAGTGTC +
Preference number: 5 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASAVATA*ACCHSV
Trigger: GACACTGTGGCAGCAAGCCAAGGCTGTGGCTACCGC...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTAAGGGCAGTTTCCCATaGTCTATGAGCTCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFKGSFP*SMSSSH
Trigger: GTGGGAGGAGCTCATAGACAATGGGAAACTGCCCTT...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp TTCTGCCAAATGTTATCTACGATCCATTCTCCCTCTGAGGTACATTCAGATAAGAGGGGCCACTCATCATaGCCTTCTAACTCCTGGACT +
Preference number: 5 (lower is better)
Translates to: FCQMLSTIHSPSEVHSDKRGHSS*PSNSWT
Trigger: AGTCCAGGAGTTAGAAGGCAATGATGAGTGGCCCCT...CTTATCTGAATGTACCTCAGAGGGAGAATGGATCGTAGATAACATTTGGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR CAA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCATGGCCATGTTCTaGCTCCAAGGTGCTCAGGAT +
Preference number: 5 (lower is better)
Translates to: LTKNIDTGVFRLAASVDIIMAMF*LQGAQD
Trigger: ATCCTGAGCACCTTGGAGCAAGAACATGGCCATGAT...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCGCAACCACATGGAGATaGGTAAGAAACTCGGCAAGG +
Preference number: 5 (lower is better)
Translates to: LTKNIDTGVFRLAASVDIATTWR*VRNSAR
Trigger: CCTTGCCGAGTTTCTTACCAATCTCCATGTGGTTGC...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTAATCATCTGCTTCCTTaGGTATCTGCCAGAGCTGTA +
Preference number: 5 (lower is better)
Translates to: VFRLAASVDIIFVLSTASNHLLP*VSARAV
Trigger: TACAGCTCTGGCAGATACCAAAGGAAGCAGATGATT...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS TCA 90 bp GAGCAGGCTTGTGGATATGTAGATACTCTACCAACTTCTTCAGAGTaGACCGTGGTAGCCTGTTTTTCTCTGGCATTGCATTATAAGCTG +
Preference number: 5 (lower is better)
Translates to: EQACGYVDTLPTSSE*TVVACFSLALHYKL
Trigger: CAGCTTATAATGCAATGCCAGAGAAAAACAGGCTACCACGGTTCACTCTGAAGAAGTTGGTAGAGTATCTACATATCCACAAGCCTGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTAAACATGGAGTCTTCTaGGTAGGAAGCTCAGGGAGC +
Preference number: 5 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFKHGVF*VGSSGS
Trigger: GCTCCCTGAGCTTCCTACCAAGAAGACTCCATGTTT...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTTTCATCAATGTTGTATaGGAAGGGAAGGGTGATGCT +
Preference number: 5 (lower is better)
Translates to: VFRLAASVDIIFVLSTASFINVV*EGKGDA
Trigger: AGCATCACCCTTCCCTTCCAATACAACATTGATGAA...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTCCAACAAAGAGGCACTaGGAATTCACATGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFPTKRH*EFTCCQ
Trigger: CTGGCAGCATGTGAATTCCAAGTGCCTCTTTGTTGG...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR CAA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCTTGGGGATGAGGACATaGTCAGAGACAAGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: LTKNIDTGVFRLAASVDILGMRT*SETSFA
Trigger: AGCAAAGCTTGTCTCTGACAATGTCCTCATCCCCAA...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp GTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTACAATCTTCCCAGGTTaGTTGAATGCCAAACTACAG +
Preference number: 5 (lower is better)
Translates to: VFRLAASVDIIFVLSTASTIFPG*LNAKLQ
Trigger: CTGTAGTTTGGCATTCAACAAACCTGGGAAGATTGT...AGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 90 bp CAGAGCCCAAGTGGATCTTTTTACACTGCTGTGCCTTTAAATTTGTaGGATCAATCCAGCAATCAATGGAAAAATCCAACTCTGAGTGCG +
Preference number: 5 (lower is better)
Translates to: QSPSGSFYTAVPLNL*DQSSNQWKNPTLSA
Trigger: CGCACTCAGAGTTGGATTTTTCCATTGATTGCTGGATTGATCCCACAAATTTAAAGGCACAGCAGTGTAAAAAGATCCACTTGGGCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCGAGAGCGTCACATCGTaGGGATTCAAATTTGGTGAT +
Preference number: 5 (lower is better)
Translates to: LTKNIDTGVFRLAASVDIESVTS*GFKFGD
Trigger: ATCACCAAATTTGAATCCCAACGATGTGACGCTCTC...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR CAA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGGTACAATGGCAGGCTaGAACCCTGCTTTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASGTMAG*NPALPA
Trigger: TGCTGGCAAAGCAGGGTTCAAGCCTGCCATTGTACC...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGGGGATGCCACAACTTaGTGGCCCCATCTAGTCCAA +
Preference number: 5 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASGDATT*WPHLVQ
Trigger: TTGGACTAGATGGGGCCACAAAGTTGTGGCATCCCC...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTTCCGTTTCATCAATGTaGTATTGGAAGGGAAGGGTG +
Preference number: 5 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFSVSSM*YWKGRV
Trigger: CACCCTTCCCTTCCAATACAACATTGATGAAACGGA...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTAGCAGCCGCATCTGGTaGTTAAAAGGTGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASSSRIW*LKGDSS
Trigger: GGAGGAGTCACCTTTTAACAACCAGATGCGGCTGCT...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGCTGGGAGCTTCTGGTaGGCTTCAGGCTTTGAAGAA +
Preference number: 5 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASAGSFW*ASGFEE
Trigger: TTCTTCAAAGCCTGAAGCCAACCAGAAGCTCCCAGC...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTAGTTCAACAGGTAAATaGTCCCACTGGCGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASSSTGK*SHWRSP
Trigger: TGGGGACCGCCAGTGGGACAATTTACCTGTTGAACT...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCGCTGTGCCTTTAAATTaGTGGGATCAATCCAGCAAT +
Preference number: 5 (lower is better)
Translates to: LTKNIDTGVFRLAASVDIAVPLN*WDQSSN
Trigger: ATTGCTGGATTGATCCCACAAATTTAAAGGCACAGC...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226222.2
CDS TCA 90 bp TCTAATCATTATCCGTTTCATCAATGTTGTATTGGAAGGGAAGGGTaGTGCTTTGCTTCTGAGCTGAGCCTCAAGTTTATCGATAGAGTC +
Preference number: 5 (lower is better)
Translates to: SNHYPFHQCCIGREG*CFASELSLKFIDRV
Trigger: GACTCTATCGATAAACTTGAGGCTCAGCTCAGAAGCAAAGCATCACCCTTCCCTTCCAATACAACATTGATGAAACGGATAATGATTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp TTTTATAATCTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTCCAACAAAGAGGCACTaGGAATTCACATGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: FYNLTKNIDTGVFRLAASPTKRH*EFTCCQ
Trigger: CTGGCAGCATGTGAATTCCAAGTGCCTCTTTGTTGG...AGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAGATTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS-3UTR CAA 90 bp TTCAGGCTAGCAGCATCTGTTGACATCATCTTTGTCCTGAGTACTGCATCTTCACGTTGGGATTCAAATTaGGTGATATGTACTGTGTTT +
Preference number: 5 (lower is better)
Translates to: FRLAASVDIIFVLSTASSRWDSN*VICTVF
Trigger: AAACACAGTACATATCACCAAATTTGAATCCCAACG...TGAAGATGCAGTACTCAGGACAAAGATGATGTCAACAGATGCTGCTAGCCTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS-3UTR CAA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTATCTTCCCAGGTTTGTaGAATGCCAAACTACAGACA +
Preference number: 5 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFIFPGL*NAKLQT
Trigger: TGTCTGTAGTTTGGCATTCAACAAACCTGGGAAGAT...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp AAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTTTGCTGTGCCTTTAAATTaGTGGGATCAATCCAGCAAT +
Preference number: 5 (lower is better)
Translates to: KNIDTGVFRLAASVDIIFAVPLN*WDQSSN
Trigger: ATTGCTGGATTGATCCCACAAATTTAAAGGCACAGC...AAAGATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226222.2
CDS-3UTR CAA 90 bp ACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCATCTGTTTTTCTCTGGCATaGCATTATAAGCTGCTTCAA +
Preference number: 5 (lower is better)
Translates to: TKNIDTGVFRLAASVDIICFSLA*HYKLLQ
Trigger: TTGAAGCAGCTTATAATGCAATGCCAGAGAAAAACA...GATGATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS-3UTR CAA 90 bp CTTACTAAGAATATAGACACAGGTGTCTTCAGGCTAGCAGCATCTGTTGACATCCGTTGGGATTCAAATTaGGTGATATGTACTGTGTTT +
Preference number: 5 (lower is better)
Translates to: LTKNIDTGVFRLAASVDIRWDSN*VICTVF
Trigger: AAACACAGTACATATCACCAAATTTGAATCCCAACG...GATGTCAACAGATGCTGCTAGCCTGAAGACACCTGTGTCTATATTCTTAGTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS GCA 72 bp GCGGGCTGCAGAAAGGCAGTCTTTCCCTGTCCTGCCTaGCCAGTCACTAGGCTCAGCCTCCCATGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: AGCRKAVFPCPA*PVTRLSLPWGS
Trigger: GCTGCCCCATGGGAGGCTGAGCCTAGTGACTGGGCAGGCAGGACAGGGAAAGACTGCCTTTCTGCAGCCCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS TCA 72 bp CTCCCATGGGGCAGCAACAGCTGCTGCACTGTATCCTaGAGAAGGCGTGGCCGTGCCGGACTCGTTGGGGTC +
Preference number: 6 (lower is better)
Translates to: LPWGSNSCCTVS*RRRGRAGLVGV
Trigger: GACCCCAACGAGTCCGGCACGGCCACGCCTTCTTCAGGATACAGTGCAGCAGCTGTTGCTGCCCCATGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CCA 72 bp GCCCAGGGAGGTGACTCCGAGAAAAGAGCTCTAGGGTaGCTGGGTACCTGTAGCCCAGCAGGGCCTGGACGT +
Preference number: 6 (lower is better)
Translates to: AQGGDSEKRALG*LGTCSPAGPGR
Trigger: ACGTCCAGGCCCTGCTGGGCTACAGGTACCCAGCCACCCTAGAGCTCTTTTCTCGGAGTCACCTCCCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS GCA 72 bp AGGGATGCCAGAAAGGCAGTCTTTCCCTGTCCTGCCTaGCCAGTCACTAGGCTCAGCCTCCCATGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: RDARKAVFPCPA*PVTRLSLPWGS
Trigger: GCTGCCCCATGGGAGGCTGAGCCTAGTGACTGGGCAGGCAGGACAGGGAAAGACTGCCTTTCTGGCATCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS GCA 72 bp GGGCTGGTCAGGGACCTTCAGGGCAGACACAAGGGATaGCAGAAAGGCAGTCTTTCCCTGTCCTGCCTGCCC +
Preference number: 6 (lower is better)
Translates to: GLVRDLQGRHKG*QKGSLSLSCLP
Trigger: GGGCAGGCAGGACAGGGAAAGACTGCCTTTCTGGCATCCCTTGTGTCTGCCCTGAAGGTCCCTGACCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 72 bp GGCGGAGTAATACCGTCGTACATGGGGGCGGCAGGCTaGCAAGAGGGCAGCCACAGCCAGAACTGTATTGGC +
Preference number: 6 (lower is better)
Translates to: GGVIPSYMGAAG*QEGSHSQNCIG
Trigger: GCCAATACAGTTCTGGCTGTGGCTGCCCTCTTGCCAGCCTGCCGCCCCCATGTACGACGGTATTACTCCGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS GCA 72 bp GAGGAGGTTGAGAGCAAGACACTGGTCAGGGCGGGCTaGAGAAAGGCAGTCTTTCCCTGTCCTGCCTGCCCA +
Preference number: 6 (lower is better)
Translates to: EEVESKTLVRAG*RKAVFPCPACP
Trigger: TGGGCAGGCAGGACAGGGAAAGACTGCCTTTCTGCAGCCCGCCCTGACCAGTGTCTTGCTCTCAACCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS CCA 72 bp CAGCAACAGCTGCTGCACTGTATCCTGAAGAAGGCGTaGCCGTGCCGGACTCGTTGGGGTCTTCAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: QQQLLHCILKKA*PCRTRWGLQLL
Trigger: CAGCAGCTGAAGACCCCAACGAGTCCGGCACGGCCACGCCTTCTTCAGGATACAGTGCAGCAGCTGTTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CAA 90 bp TCAGGGCGGGCTGCTGCAAAGTGGAAGAAAACGAACGGGGGCTCATaGGGCTGGTCAGGGACCTTCAGGGCAGACACAAGGGATGCCAGA +
Preference number: 6 (lower is better)
Translates to: SGRAAAKWKKTNGGS*GWSGTFRADTRDAR
Trigger: TCTGGCATCCCTTGTGTCTGCCCTGAAGGTCCCTGACCAGCCCAATGAGCCCCCGTTCGTTTTCTTCCACTTTGCAGCAGCCCGCCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS GCA 72 bp CCGCTTGAGCTGCTCATACATCACAGGTATAGTCATTaGTGCCCGAAGCTGCCGGCGCGTCAGGGTGCACAG +
Preference number: 6 (lower is better)
Translates to: PLELLIHHRYSH*CPKLPARQGAQ
Trigger: CTGTGCACCCTGACGCGCCGGCAGCTTCGGGCAGCAATGACTATACCTGTGATGTATGAGCAGCTCAAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS GCA 72 bp GCCGAAGGCTGCGAGCGTTGGCCACGGTTCAGGAATTaGATCACCTCCATCTCTGTCACGGATCGCCCTGAA +
Preference number: 6 (lower is better)
Translates to: AEGCERWPRFRN*ITSISVTDRPE
Trigger: TTCAGGGCGATCCGTGACAGAGATGGAGGTGATGCAATTCCTGAACCGTGGCCAACGCTCGCAGCCTTCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS GCA 72 bp GAGATGGATGTTGGCTGCTCCAACTGGGCCCCAGGCTaGAGGTGCTGCTTCTGGATCATGCTCCACACATCC +
Preference number: 6 (lower is better)
Translates to: EMDVGCSNWAPG*RCCFWIMLHTS
Trigger: GGATGTGTGGAGCATGATCCAGAAGCAGCACCTGCAGCCTGGGGCCCAGTTGGAGCAGCCAACATCCATCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS GCA 72 bp CAGCTGCTGCACTGTATCCTGAAGAAGGCGTGGCCGTaGCGGACTCGTTGGGGTCTTCAGCTGCTGAAAGCT +
Preference number: 6 (lower is better)
Translates to: QLLHCILKKAWP*RTRWGLQLLKA
Trigger: AGCTTTCAGCAGCTGAAGACCCCAACGAGTCCGGCACGGCCACGCCTTCTTCAGGATACAGTGCAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CCA 72 bp CGGCTACCTGGATCCAGTCTGAAGGCAGGTGAACAATaGCGGAGTAATACCGTCGTACATGGGGGCGGCAGG +
Preference number: 6 (lower is better)
Translates to: RLPGSSLKAGEQ*RSNTVVHGGGR
Trigger: CCTGCCGCCCCCATGTACGACGGTATTACTCCGCCATTGTTCACCTGCCTTCAGACTGGATCCAGGTAGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CAA 90 bp CAGGGCCTGGCGATAGCGCTCCAGCAACTCAACATCACAGTTCCATaGTCTGGCCTTGTGCAGCCTCAGTTTCTCCCGCTTGAGCTGCTC +
Preference number: 6 (lower is better)
Translates to: QGLAIALQQLNITVP*SGLVQPQFLPLELL
Trigger: GAGCAGCTCAAGCGGGAGAAACTGAGGCTGCACAAGGCCAGACAATGGAACTGTGATGTTGAGTTGCTGGAGCGCTATCGCCAGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CAA 90 bp CAGGCCTCTGTAAGTGCTGGGGAGGGCACTCAGCTCTCCCAGTTTTaGACGCAGATGGGTACAGAGGCGTCTGAGGAGGTTGAGAGCAAG +
Preference number: 6 (lower is better)
Translates to: QASVSAGEGTQLSQF*TQMGTEASEEVESK
Trigger: CTTGCTCTCAACCTCCTCAGACGCCTCTGTACCCATCTGCGTCAAAAACTGGGAGAGCTGAGTGCCCTCCCCAGCACTTACAGAGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS TCA 72 bp GACTCTTGGGACAGAGCCTGTCGGCATTTGCATCTGTaGGATAGACCAAGAGGGTTCGGCCAGGCATCGGGG +
Preference number: 6 (lower is better)
Translates to: DSWDRACRHLHL*DRPRGFGQASG
Trigger: CCCCGATGCCTGGCCGAACCCTCTTGGTCTATCTCACAGATGCAAATGCCGACAGGCTCTGTCCCAAGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS GCA 72 bp GAGGTTGAGAGCAAGACACTGGTCAGGGCGGGCTGCTaGAAAGTGGAAGAAAACGAACGGGGGCTCATTGGG +
Preference number: 6 (lower is better)
Translates to: EVESKTLVRAGC*KVEENERGLIG
Trigger: CCCAATGAGCCCCCGTTCGTTTTCTTCCACTTTGCAGCAGCCCGCCCTGACCAGTGTCTTGCTCTCAACCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 72 bp CTGCTGCAAAGTGGAAGAAAACGAACGGGGGCTCATTaGGCTGGTCAGGGACCTTCAGGGCAGACACAAGGG +
Preference number: 6 (lower is better)
Translates to: LLQSGRKRTGAH*AGQGPSGQTQG
Trigger: CCCTTGTGTCTGCCCTGAAGGTCCCTGACCAGCCCAATGAGCCCCCGTTCGTTTTCTTCCACTTTGCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 72 bp AGAGCAAGACACTGGTCAGGGCGGGCTGCTGCAAAGTaGAAGAAAACGAACGGGGGCTCATTGGGCTGGTCA +
Preference number: 6 (lower is better)
Translates to: RARHWSGRAAAK*KKTNGGSLGWS
Trigger: TGACCAGCCCAATGAGCCCCCGTTCGTTTTCTTCCACTTTGCAGCAGCCCGCCCTGACCAGTGTCTTGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 72 bp TCTGCTGCAGTTCCCACACCAGGCCTCTGTAAGTGCTaGGGAGGGCACTCAGCTCTCCCAGTTTTTGACGCA +
Preference number: 6 (lower is better)
Translates to: SAAVPTPGLCKC*GGHSALPVFDA
Trigger: TGCGTCAAAAACTGGGAGAGCTGAGTGCCCTCCCCAGCACTTACAGAGGCCTGGTGTGGGAACTGCAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 72 bp GTACAGAGGCGTCTGAGGAGGTTGAGAGCAAGACACTaGTCAGGGCGGGCTGCAGAAAGGCAGTCTTTCCCT +
Preference number: 6 (lower is better)
Translates to: VQRRLRRLRARH*SGRAAERQSFP
Trigger: AGGGAAAGACTGCCTTTCTGCAGCCCGCCCTGACCAGTGTCTTGCTCTCAACCTCCTCAGACGCCTCTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226430.2
CDS CAA 72 bp CTGTATCCTGAAGAAGGCGTGGCCGTGCCGGACTCGTaGGGGTCTTCAGCTGCTGAAAGCTGGTCTGGATCA +
Preference number: 6 (lower is better)
Translates to: LYPEEGVAVPDS*GSSAAESWSGS
Trigger: TGATCCAGACCAGCTTTCAGCAGCTGAAGACCCCAACGAGTCCGGCACGGCCACGCCTTCTTCAGGATACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CAA 72 bp GCTGCTGCAAAGTGGAAGAAAACGAACGGGGGCTCATaGGGCTGGTCAGGGACCTTCAGGGCAGACACAAGG +
Preference number: 6 (lower is better)
Translates to: AAAKWKKTNGGS*GWSGTFRADTR
Trigger: CCTTGTGTCTGCCCTGAAGGTCCCTGACCAGCCCAATGAGCCCCCGTTCGTTTTCTTCCACTTTGCAGCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CAA 90 bp CGGGGTGGCTGGCGGGACCGCCTCTTGGACCGATGTTTCCGTGGGTaGTACTTAGCTAGCTGGTACTCATCAAACTCGGCAAATTTGTCG +
Preference number: 6 (lower is better)
Translates to: RGGWRDRLLDRCFRG*YLASWYSSNSANLS
Trigger: CGACAAATTTGCCGAGTTTGATGAGTACCAGCTAGCTAAGTACAACCCACGGAAACATCGGTCCAAGAGGCGGTCCCGCCAGCCACCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CAA 90 bp GCTGCTGCACTGTATCCTGAAGAAGGCGTGGCCGTGCCGGACTCGTaGGGGTCTTCAGCTGCTGAAAGCTGGTCTGGATCAAATCGTCTT +
Preference number: 6 (lower is better)
Translates to: AAALYPEEGVAVPDS*GSSAAESWSGSNRL
Trigger: AAGACGATTTGATCCAGACCAGCTTTCAGCAGCTGAAGACCCCAACGAGTCCGGCACGGCCACGCCTTCTTCAGGATACAGTGCAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS TCA 72 bp GATCAGCAGCAGCACATAGTTCAGGGGAGGCCCTTGTaGGTGACTCTTGGGACAGAGCCTGTCGGCATTTGC +
Preference number: 6 (lower is better)
Translates to: DQQQHIVQGRPL*VTLGTEPVGIC
Trigger: GCAAATGCCGACAGGCTCTGTCCCAAGAGTCACTCACAAGGGCCTCCCCTGAACTATGTGCTGCTGCTGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS GCA 72 bp ACCAAGAGGGTTCGGCCAGGCATCGGGGATAGGTTGTaGTTTACTGAGAGGTTCACAGCTGTTTCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: TKRVRPGIGDRL*FTERFTAVSRA
Trigger: GGCCCTGGAAACAGCTGTGAACCTCTCAGTAAAGCACAACCTATCCCCGATGCCTGGCCGAACCCTCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS GCA 72 bp ACTGGGCCCCAGGCTGCAGGTGCTGCTTCTGGATCATaGTCCACACATCCTGGAGAACCAACTGTCCAAACT +
Preference number: 6 (lower is better)
Translates to: TGPQAAGAASGS*STHPGEPTVQT
Trigger: AGTTTGGACAGTTGGTTCTCCAGGATGTGTGGAGCATGATCCAGAAGCAGCACCTGCAGCCTGGGGCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS GCA 72 bp GAGGAGGTTGAGAGCAAGACACTGGTCAGGGCGGGCTaGTGCAAAGTGGAAGAAAACGAACGGGGGCTCATT +
Preference number: 6 (lower is better)
Translates to: EEVESKTLVRAG*CKVEENERGLI
Trigger: AATGAGCCCCCGTTCGTTTTCTTCCACTTTGCAGCAGCCCGCCCTGACCAGTGTCTTGCTCTCAACCTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 72 bp TTCTCATGCTGGAGTCTCTGGAGAACGAGTTCATGGTaGCGGGCACTGATCCCAGTCCGCAGCAGGTTACAC +
Preference number: 6 (lower is better)
Translates to: FSCWSLWRTSSW*RALIPVRSRLH
Trigger: GTGTAACCTGCTGCGGACTGGGATCAGTGCCCGCCACCATGAACTCGTTCTCCAGAGACTCCAGCATGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 72 bp TGCAGGTGCTGCTTCTGGATCATGCTCCACACATCCTaGAGAACCAACTGTCCAAACTCCTCCAGGCCCCCA +
Preference number: 6 (lower is better)
Translates to: CRCCFWIMLHTS*RTNCPNSSRPP
Trigger: TGGGGGCCTGGAGGAGTTTGGACAGTTGGTTCTCCAGGATGTGTGGAGCATGATCCAGAAGCAGCACCTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CCA 72 bp TGTATCCTGAAGAAGGCGTGGCCGTGCCGGACTCGTTaGGGTCTTCAGCTGCTGAAAGCTGGTCTGGATCAA +
Preference number: 6 (lower is better)
Translates to: CILKKAWPCRTR*GLQLLKAGLDQ
Trigger: TTGATCCAGACCAGCTTTCAGCAGCTGAAGACCCCAACGAGTCCGGCACGGCCACGCCTTCTTCAGGATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CCA 72 bp GTACAGAGGCGTCTGAGGAGGTTGAGAGCAAGACACTaGTCAGGGCGGGCTGCTGCAAAGTGGAAGAAAACG +
Preference number: 6 (lower is better)
Translates to: VQRRLRRLRARH*SGRAAAKWKKT
Trigger: CGTTTTCTTCCACTTTGCAGCAGCCCGCCCTGACCAGTGTCTTGCTCTCAACCTCCTCAGACGCCTCTGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CAA 72 bp AGCTGGTCTGGATCAAATCGTCTTCTGAGATGGATGTaGGCTGCTCCAACTGGGCCCCAGGCTGCAGGTGCT +
Preference number: 6 (lower is better)
Translates to: SWSGSNRLLRWM*AAPTGPQAAGA
Trigger: AGCACCTGCAGCCTGGGGCCCAGTTGGAGCAGCCAACATCCATCTCAGAAGACGATTTGATCCAGACCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CAA 72 bp GTAAGTGCTGGGGAGGGCACTCAGCTCTCCCAGTTTTaGACGCAGATGGGTACAGAGGCGTCTGAGGAGGTT +
Preference number: 6 (lower is better)
Translates to: VSAGEGTQLSQF*TQMGTEASEEV
Trigger: AACCTCCTCAGACGCCTCTGTACCCATCTGCGTCAAAAACTGGGAGAGCTGAGTGCCCTCCCCAGCACTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS TCA 72 bp CAGGCTCTGGTAGAACTCGGCTACCTGGATCCAGTCTaGAGGCAGGTGAACAATGGCGGAGTAATACCGTCG +
Preference number: 6 (lower is better)
Translates to: QALVELGYLDPV*RQVNNGGVIPS
Trigger: CGACGGTATTACTCCGCCATTGTTCACCTGCCTTCAGACTGGATCCAGGTAGCCGAGTTCTACCAGAGCCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS TCA 72 bp CAGCTGCTGAAAGCTGGTCTGGATCAAATCGTCTTCTaGGATGGATGTTGGCTGCTCCAACTGGGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: QLLKAGLDQIVF*DGCWLLQLGPR
Trigger: CCTGGGGCCCAGTTGGAGCAGCCAACATCCATCTCAGAAGACGATTTGATCCAGACCAGCTTTCAGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CCA 72 bp AAATCGTCTTCTGAGATGGATGTTGGCTGCTCCAACTaGGCCCCAGGCTGCAGGTGCTGCTTCTGGATCATG +
Preference number: 6 (lower is better)
Translates to: KSSSEMDVGCSN*APGCRCCFWIM
Trigger: CATGATCCAGAAGCAGCACCTGCAGCCTGGGGCCCAGTTGGAGCAGCCAACATCCATCTCAGAAGACGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CCA 72 bp GCTGAAAGCTGGTCTGGATCAAATCGTCTTCTGAGATaGATGTTGGCTGCTCCAACTGGGCCCCAGGCTGCA +
Preference number: 6 (lower is better)
Translates to: AESWSGSNRLLR*MLAAPTGPQAA
Trigger: TGCAGCCTGGGGCCCAGTTGGAGCAGCCAACATCCATCTCAGAAGACGATTTGATCCAGACCAGCTTTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CAA 72 bp GGAGACACACCATTGACCCAAGGCTACTTCCTGGACTaGAGCTGTAGCAGACATGGATTTCAGGGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: GDTPLTQGYFLD*SCSRHGFQGPG
Trigger: CCCAGGGCCCTGAAATCCATGTCTGCTACAGCTCAAGTCCAGGAAGTAGCCTTGGGTCAATGGTGTGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CAA 72 bp TGGCGGGACCGCCTCTTGGACCGATGTTTCCGTGGGTaGTACTTAGCTAGCTGGTACTCATCAAACTCGGCA +
Preference number: 6 (lower is better)
Translates to: WRDRLLDRCFRG*YLASWYSSNSA
Trigger: TGCCGAGTTTGATGAGTACCAGCTAGCTAAGTACAACCCACGGAAACATCGGTCCAAGAGGCGGTCCCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CAA 90 bp AAGGGCAGTTTCCCATTGTCTATGAGCTCCTCCCACACAGAAGCTTaGTTTCCCCGTAAACTCAGCTCCCGCTCCCAGGTCTCTGGCCTT +
Preference number: 6 (lower is better)
Translates to: KGSFPLSMSSSHTEA*FPRKLSSRSQVSGL
Trigger: AAGGCCAGAGACCTGGGAGCGGGAGCTGAGTTTACGGGGAAACAAAGCTTCTGTGTGGGAGGAGCTCATAGACAATGGGAAACTGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CAA 90 bp TGGCACAGAGCTAAGGAAATCAGGATCTCGGAAGTAGATGAGAGCTaGGGCCGAAGGCTGCGAGCGTTGGCCACGGTTCAGGAATTGCAT +
Preference number: 6 (lower is better)
Translates to: WHRAKEIRISEVDES*GRRLRALATVQELH
Trigger: ATGCAATTCCTGAACCGTGGCCAACGCTCGCAGCCTTCGGCCCAAGCTCTCATCTACTTCCGAGATCCTGATTTCCTTAGCTCTGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS TCA 72 bp TCAGGAGCTCGGTATCCATCCTTTGACCAAACAGGATaGCCCTGTCAATGGGGGTCCTTTGGACAGCCAGAG +
Preference number: 6 (lower is better)
Translates to: SGARYPSFDQTG*PCQWGSFGQPE
Trigger: CTCTGGCTGTCCAAAGGACCCCCATTGACAGGGTCATCCTGTTTGGTCAAAGGATGGATACCGAGCTCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS TCA 72 bp GAATTGCATCACCTCCATCTCTGTCACGGATCGCCCTaGAGGGTACTCATGGGTCCAGTGAAAGTGGGGATG +
Preference number: 6 (lower is better)
Translates to: ELHHLHLCHGSP*RVLMGPVKVGM
Trigger: CATCCCCACTTTCACTGGACCCATGAGTACCCTTCAGGGCGATCCGTGACAGAGATGGAGGTGATGCAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS TCA 72 bp CTGTCACCAGCAATCCCGGAAGCACATGGAGGGCTGTaGCAGAGCCCAAGTGGATCTTTTTACACTGCTGTG +
Preference number: 6 (lower is better)
Translates to: LSPAIPEAHGGL*QSPSGSFYTAV
Trigger: CACAGCAGTGTAAAAAGATCCACTTGGGCTCTGTCACAGCCCTCCATGTGCTTCCGGGATTGCTGGTGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS GCA 72 bp CTGGCCTTGTGCAGCCTCAGTTTCTCCCGCTTGAGCTaGTCATACATCACAGGTATAGTCATTGCTGCCCGA +
Preference number: 6 (lower is better)
Translates to: LALCSLSFSRLS*SYITGIVIAAR
Trigger: TCGGGCAGCAATGACTATACCTGTGATGTATGAGCAGCTCAAGCGGGAGAAACTGAGGCTGCACAAGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS GCA 72 bp TTCACAAATCCTCCCCCACACAAGCAAACAGTCACTTaGTCGGCTCGAGCCACCATCATTCCGATCAGCAGC +
Preference number: 6 (lower is better)
Translates to: FTNPPPHKQTVT*SARATIIPISS
Trigger: GCTGCTGATCGGAATGATGGTGGCTCGAGCCGAGCAAGTGACTGTTTGCTTGTGTGGGGGAGGATTTGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 72 bp TGGACAGATCTATGTCCATGTATTTTCTCCAGGGGCTaGAGGTCAGGGAGCATGGTCAGGCACCGGTTCTTC +
Preference number: 6 (lower is better)
Translates to: WTDLCPCIFSRG*RSGSMVRHRFF
Trigger: GAAGAACCGGTGCCTGACCATGCTCCCTGACCTCCAGCCCCTGGAGAAAATACATGGACATAGATCTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 72 bp TCCAGTGAAAGTGGGGATGATCAGGAAGATCATAGCTaGGGGGAATGTAGCCATAGCGGGAGCCCAGAATCC +
Preference number: 6 (lower is better)
Translates to: SSESGDDQEDHS*GECSHSGSPES
Trigger: GGATTCTGGGCTCCCGCTATGGCTACATTCCCCCCAGCTATGATCTTCCTGATCATCCCCACTTTCACTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CCA 72 bp AATGTTTCTTGGCTCTGGGATGGTAGGATGGCTCGGTaGGTAAAGCTGCTTGCCACCAAGCCTGACAACCTG +
Preference number: 6 (lower is better)
Translates to: NVSWLWDGRMAR*VKLLATKPDNL
Trigger: CAGGTTGTCAGGCTTGGTGGCAAGCAGCTTTACCCACCGAGCCATCCTACCATCCCAGAGCCAAGAAACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227526.2
CDS CAA 72 bp TTCCCATTGTCTATGAGCTCCTCCCACACAGAAGCTTaGTTTCCCCGTAAACTCAGCTCCCGCTCCCAGGTC +
Preference number: 6 (lower is better)
Translates to: FPLSMSSSHTEA*FPRKLSSRSQV
Trigger: GACCTGGGAGCGGGAGCTGAGTTTACGGGGAAACAAAGCTTCTGTGTGGGAGGAGCTCATAGACAATGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CAA 72 bp CTTCACAAATCCTCCCCCACACAAGCAAACAGTCACTaGCTCGGCTCGAGCCACCATCATTCCGATCAGCAG +
Preference number: 6 (lower is better)
Translates to: LHKSSPTQANSH*LGSSHHHSDQQ
Trigger: CTGCTGATCGGAATGATGGTGGCTCGAGCCGAGCAAGTGACTGTTTGCTTGTGTGGGGGAGGATTTGTGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CAA 90 bp CTCAGGGAGCAGGCAGTTGCTAGTTTTCAGGCTATGCAGATCAGCTaGTGCCGTATGAGATATGTGAAGACCCTGGAGCAAGGGGCTGGT +
Preference number: 6 (lower is better)
Translates to: LREQAVASFQAMQIS*CRMRYVKTLEQGAG
Trigger: ACCAGCCCCTTGCTCCAGGGTCTTCACATATCTCATACGGCACAAGCTGATCTGCATAGCCTGAAAACTAGCAACTGCCTGCTCCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CAA 90 bp CTTTTCTTTGGAGACACACCATTGACCCAAGGCTACTTCCTGGACTaGAGCTGTAGCAGACATGGATTTCAGGGCCCTGGGTCCAGGTGG +
Preference number: 6 (lower is better)
Translates to: LFFGDTPLTQGYFLD*SCSRHGFQGPGSRW
Trigger: CCACCTGGACCCAGGGCCCTGAAATCCATGTCTGCTACAGCTCAAGTCCAGGAAGTAGCCTTGGGTCAATGGTGTGTCTCCAAAGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CAA 90 bp GGCAGCCACAGCCAGAACTGTATTGGCGATGTCCCGGAGGTTAAGTaGCTGCCGAGCATACAAAGATGCCTTAAGGATGAACTCCGGTTC +
Preference number: 6 (lower is better)
Translates to: GSHSQNCIGDVPEVK*LPSIQRCLKDELRF
Trigger: GAACCGGAGTTCATCCTTAAGGCATCTTTGTATGCTCGGCAGCAACTTAACCTCCGGGACATCGCCAATACAGTTCTGGCTGTGGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 72 bp TGGACAGATATATGCCCATCTATTCTCTCCGTGGGCTaGAGGTCAGAGAGCATGGTCAGACACTGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: WTDICPSILSVG*RSESMVRHWFS
Trigger: GGAGAACCAGTGTCTGACCATGCTCTCTGACCTCCAGCCCACGGAGAGAATAGATGGGCATATATCTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 72 bp GCAGAGGGGCTTTCTTCTCAGAATGTTTCTTGGCTCTaGGATGGTAGGATGGCTCGGTGGGTAAAGCTGCTT +
Preference number: 6 (lower is better)
Translates to: AEGLSSQNVSWL*DGRMARWVKLL
Trigger: AAGCAGCTTTACCCACCGAGCCATCCTACCATCCCAGAGCCAAGAAACATTCTGAGAAGAAAGCCCCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227526.2
CDS CAA 72 bp GGAGTCTTCTTGGTAGGAAGCTCAGGGAGCAGGCAGTaGCTAGTTTTCAGGCTATGCAGATCAGCTTGTGCC +
Preference number: 6 (lower is better)
Translates to: GVFLVGSSGSRQ*LVFRLCRSACA
Trigger: GGCACAAGCTGATCTGCATAGCCTGAAAACTAGCAACTGCCTGCTCCCTGAGCTTCCTACCAAGAAGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CAA 72 bp TCCAGCAACTCAACATCACAGTTCCATTGTCTGGCCTaGTGCAGCCTCAGTTTCTCCCGCTTGAGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: SSNSTSQFHCLA*CSLSFSRLSCS
Trigger: TGAGCAGCTCAAGCGGGAGAAACTGAGGCTGCACAAGGCCAGACAATGGAACTGTGATGTTGAGTTGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CAA 90 bp TCACAGTTCCATTGTCTGGCCTTGTGCAGCCTCAGTTTCTCCCGCTaGAGCTGCTCATACATCACAGGTATAGTCATTGCTGCCCGAAGC +
Preference number: 6 (lower is better)
Translates to: SQFHCLALCSLSFSR*SCSYITGIVIAARS
Trigger: GCTTCGGGCAGCAATGACTATACCTGTGATGTATGAGCAGCTCAAGCGGGAGAAACTGAGGCTGCACAAGGCCAGACAATGGAACTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CAA 90 bp TCCCCATGCATGTCACGGAAAGTGGATGAAATGAAAAGCCGGATATaGCGCCATCCATGCTGGGAAATAGGACCCAAGGGACCAGGGATG +
Preference number: 6 (lower is better)
Translates to: SPCMSRKVDEMKSRI*RHPCWEIGPKGPGM
Trigger: CATCCCTGGTCCCTTGGGTCCTATTTCCCAGCATGGATGGCGCAATATCCGGCTTTTCATTTCATCCACTTTCCGTGACATGCATGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CAA 90 bp GGTCCAGGTGGAAGGTCTAGTTCCTCAGAGAAACATGGAGTCTTCTaGGTAGGAAGCTCAGGGAGCAGGCAGTTGCTAGTTTTCAGGCTA +
Preference number: 6 (lower is better)
Translates to: GPGGRSSSSEKHGVF*VGSSGSRQLLVFRL
Trigger: TAGCCTGAAAACTAGCAACTGCCTGCTCCCTGAGCTTCCTACCAAGAAGACTCCATGTTTCTCTGAGGAACTAGACCTTCCACCTGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS TCA 72 bp CTCGCTCCCCATGCATGTCACGGAAAGTGGATGAAATaGAAAGCCGGATATTGCGCCATCCATGCTGGGAAA +
Preference number: 6 (lower is better)
Translates to: LAPHACHGKWMK*KAGYCAIHAGK
Trigger: TTTCCCAGCATGGATGGCGCAATATCCGGCTTTTCATTTCATCCACTTTCCGTGACATGCATGGGGAGCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS GCA 72 bp AGCAACTCAACATCACAGTTCCATTGTCTGGCCTTGTaGAGCCTCAGTTTCTCCCGCTTGAGCTGCTCATAC +
Preference number: 6 (lower is better)
Translates to: SNSTSQFHCLAL*SLSFSRLSCSY
Trigger: GTATGAGCAGCTCAAGCGGGAGAAACTGAGGCTGCACAAGGCCAGACAATGGAACTGTGATGTTGAGTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS GCA 72 bp GTGGATGAAATGAAAAGCCGGATATTGCGCCATCCATaGTGGGAAATAGGACCCAAGGGACCAGGGATGTTC +
Preference number: 6 (lower is better)
Translates to: VDEMKSRILRHP*WEIGPKGPGMF
Trigger: GAACATCCCTGGTCCCTTGGGTCCTATTTCCCAGCATGGATGGCGCAATATCCGGCTTTTCATTTCATCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CCA 72 bp GATGAAATGAAAAGCCGGATATTGCGCCATCCATGCTaGGAAATAGGACCCAAGGGACCAGGGATGTTCTCC +
Preference number: 6 (lower is better)
Translates to: DEMKSRILRHPC*EIGPKGPGMFS
Trigger: GGAGAACATCCCTGGTCCCTTGGGTCCTATTTCCCAGCATGGATGGCGCAATATCCGGCTTTTCATTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CCA 72 bp AAAAGGGCAGAGGGGCTTTCTTCTCAGAATGTTTCTTaGCTCTGGGATGGTAGGATGGCTCGGTGGGTAAAG +
Preference number: 6 (lower is better)
Translates to: KRAEGLSSQNVS*LWDGRMARWVK
Trigger: CTTTACCCACCGAGCCATCCTACCATCCCAGAGCCAAGAAACATTCTGAGAAGAAAGCCCCTCTGCCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227526.2
CDS CAA 72 bp CTGTTTGGCTACTTTCAGGAGCTCGGTATCCATCCTTaGACCAAACAGGATGACCCTGTCAATGGGGGTCCT +
Preference number: 6 (lower is better)
Translates to: LFGYFQELGIHP*TKQDDPVNGGP
Trigger: AGGACCCCCATTGACAGGGTCATCCTGTTTGGTCAAAGGATGGATACCGAGCTCCTGAAAGTAGCCAAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CAA 90 bp CCAGATAATCTGTTTGGCTACTTTCAGGAGCTCGGTATCCATCCTTaGACCAAACAGGATGACCCTGTCAATGGGGGTCCTTTGGACAGC +
Preference number: 6 (lower is better)
Translates to: PDNLFGYFQELGIHP*TKQDDPVNGGPLDS
Trigger: GCTGTCCAAAGGACCCCCATTGACAGGGTCATCCTGTTTGGTCAAAGGATGGATACCGAGCTCCTGAAAGTAGCCAAACAGATTATCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS TCA 72 bp TGTTTGGCTACTTTCAGGAGCTCGGTATCCATCCTTTaGCCAAACAGGATGACCCTGTCAATGGGGGTCCTT +
Preference number: 6 (lower is better)
Translates to: CLATFRSSVSIL*PNRMTLSMGVL
Trigger: AAGGACCCCCATTGACAGGGTCATCCTGTTTGGTCAAAGGATGGATACCGAGCTCCTGAAAGTAGCCAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS GCA 72 bp GCCAGAACTGTATTGGCGATGTCCCGGAGGTTAAGTTaGTGCCGAGCATACAAAGATGCCTTAAGGATGAAC +
Preference number: 6 (lower is better)
Translates to: ARTVLAMSRRLS*CRAYKDALRMN
Trigger: GTTCATCCTTAAGGCATCTTTGTATGCTCGGCAGCAACTTAACCTCCGGGACATCGCCAATACAGTTCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CAA 72 bp GGAAGGTCTAGTTCCTCAGAGAAACATGGAGTCTTCTaGGTAGGAAGCTCAGGGAGCAGGCAGTTGCTAGTT +
Preference number: 6 (lower is better)
Translates to: GRSSSSEKHGVF*VGSSGSRQLLV
Trigger: AACTAGCAACTGCCTGCTCCCTGAGCTTCCTACCAAGAAGACTCCATGTTTCTCTGAGGAACTAGACCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS GCA 72 bp AGAACTGTATTGGCGATGTCCCGGAGGTTAAGTTGCTaGCGAGCATACAAAGATGCCTTAAGGATGAACTCC +
Preference number: 6 (lower is better)
Translates to: RTVLAMSRRLSC*RAYKDALRMNS
Trigger: GGAGTTCATCCTTAAGGCATCTTTGTATGCTCGGCAGCAACTTAACCTCCGGGACATCGCCAATACAGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CAA 72 bp AGCCAGAACTGTATTGGCGATGTCCCGGAGGTTAAGTaGCTGCCGAGCATACAAAGATGCCTTAAGGATGAA +
Preference number: 6 (lower is better)
Translates to: SQNCIGDVPEVK*LPSIQRCLKDE
Trigger: TTCATCCTTAAGGCATCTTTGTATGCTCGGCAGCAACTTAACCTCCGGGACATCGCCAATACAGTTCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CAA 90 bp TCCCGTCAGTGCAGCCTGAGAGCGTCACATCGTTGGGATTCAAATTaGGTGATATGTACTGTGTTTTCTGTAGGAGGACACCAACAAAGA +
Preference number: 6 (lower is better)
Translates to: SRQCSLRASHRWDSN*VICTVFSVGGHQQR
Trigger: TCTTTGTTGGTGTCCTCCTACAGAAAACACAGTACATATCACCAAATTTGAATCCCAACGATGTGACGCTCTCAGGCTGCACTGACGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS TCA 72 bp CAGTGGTTTCAGGATGAAAGCCAGAGTCTCCAGATGTaGGTTTTAAGACCGGTGCCTCCACTTCTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: QWFQDESQSLQM*VLRPVPPLLLL
Trigger: AAGAAGAAGAAGTGGAGGCACCGGTCTTAAAACTCACATCTGGAGACTCTGGCTTTCATCCTGAAACCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CCA 72 bp TTGGACCGATGTTTCCGTGGGTTGTACTTAGCTAGCTaGTACTCATCAAACTCGGCAAATTTGTCGGTCATG +
Preference number: 6 (lower is better)
Translates to: LDRCFRGLYLAS*YSSNSANLSVM
Trigger: CATGACCGACAAATTTGCCGAGTTTGATGAGTACCAGCTAGCTAAGTACAACCCACGGAAACATCGGTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CAA 90 bp ATGAATTTCAGGATCCCGTCAGTGCAGCCTGAGAGCGTCACATCGTaGGGATTCAAATTTGGTGATATGTACTGTGTTTTCTGTAGGAGG +
Preference number: 6 (lower is better)
Translates to: MNFRIPSVQPESVTS*GFKFGDMYCVFCRR
Trigger: CCTCCTACAGAAAACACAGTACATATCACCAAATTTGAATCCCAACGATGTGACGCTCTCAGGCTGCACTGACGGGATCCTGAAATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS TCA 72 bp GCTAGACATTGGTTTTCCAAAGAAAGGACGTCTGGATaGCTAGACATATGTCCACATAGCTTCTCCAGAGGC +
Preference number: 6 (lower is better)
Translates to: ARHWFSKERTSG*LDICPHSFSRG
Trigger: GCCTCTGGAGAAGCTATGTGGACATATGTCTAGTCATCCAGACGTCCTTTCTTTGGAAAACCAATGTCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CAA 72 bp TTCTTCTTGAAATTCCTTTTCTTTGGAGACACACCATaGACCCAAGGCTACTTCCTGGACTTGAGCTGTAGC +
Preference number: 6 (lower is better)
Translates to: FFLKFLFFGDTP*TQGYFLDLSCS
Trigger: GCTACAGCTCAAGTCCAGGAAGTAGCCTTGGGTCAATGGTGTGTCTCCAAAGAAAAGGAATTTCAAGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9
CDS CAA 72 bp TGTGTTTTCTGTAGGAGGACACCAACAAAGAGGCACTaGGAATTCACATGCTGCCAGATAATCTGTTTGGCT +
Preference number: 6 (lower is better)
Translates to: CVFCRRTPTKRH*EFTCCQIICLA
Trigger: AGCCAAACAGATTATCTGGCAGCATGTGAATTCCAAGTGCCTCTTTGTTGGTGTCCTCCTACAGAAAACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CAA 90 bp GATATGTACTGTGTTTTCTGTAGGAGGACACCAACAAAGAGGCACTaGGAATTCACATGCTGCCAGATAATCTGTTTGGCTACTTTCAGG +
Preference number: 6 (lower is better)
Translates to: DMYCVFCRRTPTKRH*EFTCCQIICLATFR
Trigger: CCTGAAAGTAGCCAAACAGATTATCTGGCAGCATGTGAATTCCAAGTGCCTCTTTGTTGGTGTCCTCCTACAGAAAACACAGTACATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000006444.9
ENSMUST00000226430.2
CDS CAA 72 bp CCAAGTGGATCTTTTTACACTGCTGTGCCTTTAAATTaGTGGGATCAATCCAGCAATCAATGGAAAAATCCA +
Preference number: 6 (lower is better)
Translates to: PSGSFYTAVPLN*WDQSSNQWKNP
Trigger: TGGATTTTTCCATTGATTGCTGGATTGATCCCACAAATTTAAAGGCACAGCAGTGTAAAAAGATCCACTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000006444.9