Pregenerated sensors for TENT5D (Mus musculus)

Ensembl gene IDs: ENSMUSG00000073007

Ensembl transcript IDs: ENSMUST00000101292.9, ENSMUST00000143975.8, ENSMUST00000144695.8, ENSMUST00000167154.2

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CAA 90 bp	GCTGGTTCTTGTTGTGACAGAAAAATAAGTTTTCCGATGGCCTTATaGATATTCATTCAGACTAGCTTGCTGTTATCATCGCATATAACA	+
Preference number: 2 (lower is better) Translates to: AGSCCDRKISFPMAL*IFIQTSLLLSSHIT Trigger: TGTTATATGCGATGATAACAGCAAGCTAGTCTGAATGAATATCAATAAGGCCATCGGAAAACTTATTTTTCTGTCACAACAAGAACCAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101292.9 ENSMUST00000167154.2
3UTR CAA 72 bp	TGTTGTGACAGAAAAATAAGTTTTCCGATGGCCTTATaGATATTCATTCAGACTAGCTTGCTGTTATCATCG	+
Preference number: 4 (lower is better) Translates to: CCDRKISFPMAL*IFIQTSLLLSS Trigger: CGATGATAACAGCAAGCTAGTCTGAATGAATATCAATAAGGCCATCGGAAAACTTATTTTTCTGTCACAACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000101292.9 ENSMUST00000167154.2
CDS GCA 90 bp	GTTTACAACTCCATGCAAGGTCATAAGGTAGTCATACTTGTTCTTTaGTTCACCAATGAAATGGTTGTGGAGGTACGATTCAATTTTCTT	+
Preference number: 5 (lower is better) Translates to: VYNSMQGHKVVILVL*FTNEMVVEVRFNFL Trigger: AAGAAAATTGAATCGTACCTCCACAACCATTTCATTGGTGAAGCAAAGAACAAGTATGACTACCTTATGACCTTGCATGGAGTTGTAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101292.9 ENSMUST00000167154.2
CDS CCA 90 bp	AGAACACATATAACGTTCCAGAGTCTTAATTTCTGTTTGACAAGCTaGTTTGAAGTCACGAACCAACAAATTGCTATACTTCAAAAGGCC	+
Preference number: 5 (lower is better) Translates to: RTHITFQSLNFCLTS*FEVTNQQIAILQKA Trigger: GGCCTTTTGAAGTATAGCAATTTGTTGGTTCGTGACTTCAAACCAGCTTGTCAAACAGAAATTAAGACTCTGGAACGTTATATGTGTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101292.9 ENSMUST00000167154.2
CDS CAA 72 bp	CTGCCTTCTTTCATATCCCATGAGGCAGACGGTGCTTaGGTTTACAACTCCATGCAAGGTCATAAGGTAGTC	+
Preference number: 6 (lower is better) Translates to: LPSFISHEADGA*VYNSMQGHKVV Trigger: GACTACCTTATGACCTTGCATGGAGTTGTAAACCAAAGCACCGTCTGCCTCATGGGATATGAAAGAAGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101292.9 ENSMUST00000167154.2
CDS CAA 72 bp	TTACCTCCAGCGTGGGAAAATTGCCCCTTCCATGAATaGGGATCACTTCATGTAACACACGATCCAGTGTTA	+
Preference number: 6 (lower is better) Translates to: LPPAWENCPFHE*GSLHVTHDPVL Trigger: TAACACTGGATCGTGTGTTACATGAAGTGATCCCAATTCATGGAAGGGGCAATTTTCCCACGCTGGAGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000101292.9 ENSMUST00000143975.8 ENSMUST00000167154.2
CDS CAA 90 bp	GTTAAGGGTCTGCCTTCTTTCATATCCCATGAGGCAGACGGTGCTTaGGTTTACAACTCCATGCAAGGTCATAAGGTAGTCATACTTGTT	+
Preference number: 6 (lower is better) Translates to: VKGLPSFISHEADGA*VYNSMQGHKVVILV Trigger: AACAAGTATGACTACCTTATGACCTTGCATGGAGTTGTAAACCAAAGCACCGTCTGCCTCATGGGATATGAAAGAAGGCAGACCCTTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101292.9 ENSMUST00000167154.2
CDS TCA 72 bp	ATCACTTCATGTAACACACGATCCAGTGTTACGATGTaGTCCCAAGTGAGATTGCTGAATCTGATCTCCGAC	+
Preference number: 6 (lower is better) Translates to: ITSCNTRSSVTM*SQVRLLNLISD Trigger: GTCGGAGATCAGATTCAGCAATCTCACTTGGGATCACATCGTAACACTGGATCGTGTGTTACATGAAGTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000101292.9 ENSMUST00000143975.8 ENSMUST00000144695.8 ENSMUST00000167154.2
CDS GCA 72 bp	TCCATGCAAGGTCATAAGGTAGTCATACTTGTTCTTTaGTTCACCAATGAAATGGTTGTGGAGGTACGATTC	+
Preference number: 6 (lower is better) Translates to: SMQGHKVVILVL*FTNEMVVEVRF Trigger: GAATCGTACCTCCACAACCATTTCATTGGTGAAGCAAAGAACAAGTATGACTACCTTATGACCTTGCATGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101292.9 ENSMUST00000167154.2
CDS TCA 72 bp	GATTCCATTATGGCTTGCGAGTATGTAACTTGCTGTTaGGCCATTCAATCTTGTATCTTTAACAACAATGCC	+
Preference number: 6 (lower is better) Translates to: DSIMACEYVTCC*AIQSCIFNNNA Trigger: GGCATTGTTGTTAAAGATACAAGATTGAATGGCTCAACAGCAAGTTACATACTCGCAAGCCATAATGGAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000101292.9 ENSMUST00000143975.8 ENSMUST00000167154.2
CDS CCA 72 bp	ATAACGTTCCAGAGTCTTAATTTCTGTTTGACAAGCTaGTTTGAAGTCACGAACCAACAAATTGCTATACTT	+
Preference number: 6 (lower is better) Translates to: ITFQSLNFCLTS*FEVTNQQIAIL Trigger: AAGTATAGCAATTTGTTGGTTCGTGACTTCAAACCAGCTTGTCAAACAGAAATTAAGACTCTGGAACGTTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101292.9 ENSMUST00000167154.2
CDS CAA 72 bp	AGAACACATATAACGTTCCAGAGTCTTAATTTCTGTTaGACAAGCTGGTTTGAAGTCACGAACCAACAAATT	+
Preference number: 6 (lower is better) Translates to: RTHITFQSLNFC*TSWFEVTNQQI Trigger: AATTTGTTGGTTCGTGACTTCAAACCAGCTTGTCAAACAGAAATTAAGACTCTGGAACGTTATATGTGTTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101292.9 ENSMUST00000167154.2

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