Pregenerated sensors for TENT5C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044468Ensembl transcript IDs: ENSMUST00000061455.9
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTAGGTGCAGGCCATGCCTCAAGCCACAGGCAGTCCCAGGAATCTaGCTTAGAGGCATGAGGAGTCACATTGAAATGACTGACCGAGGA | + |
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Preference number: 1 (lower is better) Translates to: PRCRPCLKPQAVPGI*LRGMRSHIEMTDRG Trigger: TCCTCGGTCAGTCATTTCAATGTGACTCCTCATGCCTCTAAGTCAGATTCCTGGGACTGCCTGTGGCTTGAGGCATGGCCTGCACCTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR GCA 90 bp | GAAAATCAAGTTTTCATGCATAATGTGAGCGCTCGCGAGCGTGTGTaGACGCGCGCGCACACACACACACAGGCCAGGTCACTGGATTCT | + |
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Preference number: 1 (lower is better) Translates to: ENQVFMHNVSARERV*TRAHTHTQARSLDS Trigger: AGAATCCAGTGACCTGGCCTGTGTGTGTGTGTGCGCGCGCGTGCACACACGCTCGCGAGCGCTCACATTATGCATGAAAACTTGATTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR GCA 90 bp | TACAGAATAAGGAAGATCACTCTTGACTCTCTGGACTCAGCCCTCTaGACAGGGCCAGACCTGACACTAAACCCCTACTCCCCCTGCAAC | + |
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Preference number: 1 (lower is better) Translates to: YRIRKITLDSLDSAL*TGPDLTLNPYSPCN Trigger: GTTGCAGGGGGAGTAGGGGTTTAGTGTCAGGTCTGGCCCTGTGCAGAGGGCTGAGTCCAGAGAGTCAAGAGTGATCTTCCTTATTCTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR CCA 90 bp | GGCAGACTAAAAGGGACCGATCAAGGTGGGGCCGTCATCCAGTGGTaGTTTACAACTCCTGTGTCTCCTCTCTCCATCCTCAGAAGACAA | + |
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Preference number: 1 (lower is better) Translates to: GRLKGTDQGGAVIQW*FTTPVSPLSILRRQ Trigger: TTGTCTTCTGAGGATGGAGAGAGGAGACACAGGAGTTGTAAACCACCACTGGATGACGGCCCCACCTTGATCGGTCCCTTTTAGTCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR TCA 90 bp | GGCATATGTGAGCAGCACAAAAGGCAGGCTTCAGATAAAGCTTCCTaGCATCTGAAGTGCAAGGTTACCTGGCCTGTTCTGGTCTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: GICEQHKRQASDKAS*HLKCKVTWPVLVWQ Trigger: CTGCCAGACCAGAACAGGCCAGGTAACCTTGCACTTCAGATGTCAGGAAGCTTTATCTGAAGCCTGCCTTTTGTGCTGCTCACATATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR TCA 90 bp | GCGCTCAAGGGTAAAGATGCTGTTTTCAGCCCAGCTGCCCTTGACTaGGAAACAGAACAGAGAACCAACTCGGAAAGCAGGTCAGAGTTC | + |
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Preference number: 1 (lower is better) Translates to: ALKGKDAVFSPAALD*ETEQRTNSESRSEF Trigger: GAACTCTGACCTGCTTTCCGAGTTGGTTCTCTGTTCTGTTTCTCAGTCAAGGGCAGCTGGGCTGAAAACAGCATCTTTACCCTTGAGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR CCA 90 bp | AGAAGTCACGCCTCCTATTGCATCTCCCTGAGTGGCACTCAACTATaGGTCCTTTTAGGGTTGGCTCACGATAGTCTGTGGACCTATTCC | + |
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Preference number: 1 (lower is better) Translates to: RSHASYCISLSGTQL*VLLGLAHDSLWTYS Trigger: GGAATAGGTCCACAGACTATCGTGAGCCAACCCTAAAAGGACCCATAGTTGAGTGCCACTCAGGGAGATGCAATAGGAGGCGTGACTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR CCA 90 bp | CCCTACTCCCCCTGCAACTTGGAGAGAGGAAGTGGAATTCGAGAATaGTTCCACTGGCTACTCTCTTCTCCTGAAATCCCTGAATTTCCC | + |
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Preference number: 1 (lower is better) Translates to: PYSPCNLERGSGIRE*FHWLLSSPEIPEFP Trigger: GGGAAATTCAGGGATTTCAGGAGAAGAGAGTAGCCAGTGGAACCATTCTCGAATTCCACTTCCTCTCTCCAAGTTGCAGGGGGAGTAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR CCA 90 bp | TTTCATACTGGGAGTGACGTGCATAAAGGGCTTCCAATTAAAAGGTaGGAAGAACCTCCTGTCAGTCAAGTCAGTCACGACAGTGGCGCC | + |
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Preference number: 1 (lower is better) Translates to: FHTGSDVHKGLPIKR*EEPPVSQVSHDSGA Trigger: GGCGCCACTGTCGTGACTGACTTGACTGACAGGAGGTTCTTCCCACCTTTTAATTGGAAGCCCTTTATGCACGTCACTCCCAGTATGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR CCA 90 bp | CCCTGCAACTTGGAGAGAGGAAGTGGAATTCGAGAATGGTTCCACTaGCTACTCTCTTCTCCTGAAATCCCTGAATTTCCCAGCTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: PCNLERGSGIREWFH*LLSSPEIPEFPSCG Trigger: TCCACAGCTGGGAAATTCAGGGATTTCAGGAGAAGAGAGTAGCCAGTGGAACCATTCTCGAATTCCACTTCCTCTCTCCAAGTTGCAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR CCA 90 bp | TCTCTTCTCCTGAAATCCCTGAATTTCCCAGCTGTGGAAACAATCTaGGGAATGCAATGGCTACTTTTGAAGGGATTGGTGGAGAGCGGT | + |
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Preference number: 1 (lower is better) Translates to: SLLLKSLNFPAVETI*GMQWLLLKGLVESG Trigger: ACCGCTCTCCACCAATCCCTTCAAAAGTAGCCATTGCATTCCCCAGATTGTTTCCACAGCTGGGAAATTCAGGGATTTCAGGAGAAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR GCA 90 bp | CTTGTCACAGCTGAAGCAGTCCTGCTTTCCGCTTCTATTAGCAAGTaGTTACATTCAGGGAGGCTCCAACACACTTCAAAAGCTTTGATT | + |
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Preference number: 1 (lower is better) Translates to: LVTAEAVLLSASISK*LHSGRLQHTSKALI Trigger: AATCAAAGCTTTTGAAGTGTGTTGGAGCCTCCCTGAATGTAAGCACTTGCTAATAGAAGCGGAAAGCAGGACTGCTTCAGCTGTGACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR TCA 90 bp | GGATCAACTCCTGGGAGACCAAAGCAGCACATTCCAGAAGCAACTTaGAAACACAGCACTAGGAAAAAGCCAGCCATTTCATTTTTGTTA | + |
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Preference number: 1 (lower is better) Translates to: GSTPGRPKQHIPEAT*KHSTRKKPAISFLL Trigger: TAACAAAAATGAAATGGCTGGCTTTTTCCTAGTGCTGTGTTTTCAAGTTGCTTCTGGAATGTGCTGCTTTGGTCTCCCAGGAGTTGATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR TCA 90 bp | AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCACTATaGCACAAATTCCAAATTAAGTCAGACAGGAGAGAAAAGGCACTG | + |
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Preference number: 1 (lower is better) Translates to: RERERERERERERSL*HKFQIKSDRREKAL Trigger: CAGTGCCTTTTCTCTCCTGTCTGACTTAATTTGGAATTTGTGTCATAGTGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR TCA 90 bp | AGCTCGGATCTTTGGATTTTTACGGTCACTGAACAAAGTAGCAATTaGGATGGTGGATGTGATGGAGTCACTTCAGAAATCAAGCTTGCT | + |
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Preference number: 1 (lower is better) Translates to: SSDLWIFTVTEQSSN*DGGCDGVTSEIKLA Trigger: AGCAAGCTTGATTTCTGAAGTGACTCCATCACATCCACCATCTCAATTGCTACTTTGTTCAGTGACCGTAAAAATCCAAAGATCCGAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR TCA 90 bp | GCAAGTGCTTACATTCAGGGAGGCTCCAACACACTTCAAAAGCTTTaGTTGGGCAAACCTAGTTCTGTGCAAACACATTCTCTTTTGATT | + |
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Preference number: 1 (lower is better) Translates to: ASAYIQGGSNTLQKL*LGKPSSVQTHSLLI Trigger: AATCAAAAGAGAATGTGTTTGCACAGAACTAGGTTTGCCCAATCAAAGCTTTTGAAGTGTGTTGGAGCCTCCCTGAATGTAAGCACTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR CCA 90 bp | TTTGTAAAGAGCACAGATCATGTTAATTACCTCCATCCTCTGCAGTaGATGGTCAGCTCACCTTCCTATATAAACACACATGAGAATTTG | + |
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Preference number: 1 (lower is better) Translates to: FVKSTDHVNYLHPLQ*MVSSPSYINTHENL Trigger: CAAATTCTCATGTGTGTTTATATAGGAAGGTGAGCTGACCATCCACTGCAGAGGATGGAGGTAATTAACATGATCTGTGCTCTTTACAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR GCA 90 bp | CTGACCGAGGAGCAGCACCTTTCTACCACGGTAAGGCTGAAGGGTGAGCCTGAAGTTACAGCCTGCGCTTaGCCTTCAGTGCCCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LTEEQHLSTTVRLKGEPEVTACA*PSVPSA Trigger: GGCAGAGGGCACTGAAGGGCAAGCGCAGGCTGTAAC...TTCAGGCTCACCCTTCAGCCTTACCGTGGTAGAAAGGTGCTGCTCCTCGGTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR CCA 90 bp | CTGACCGAGGAGCAGCACCTTTCTACCACGGTAAGGCTGAAGGGTGAGCCTGAAACCGAGTTCCCACTGTaGAAACCCTCAGGTCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: LTEEQHLSTTVRLKGEPETEFPL*KPSGLQ Trigger: CTGAAGACCTGAGGGTTTCCACAGTGGGAACTCGGT...TTCAGGCTCACCCTTCAGCCTTACCGTGGTAGAAAGGTGCTGCTCCTCGGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR TCA 90 bp | CACCTGCCAGGCCTAGGTGCAGGCCATGCCTCAAGCCACAGGCAGTCCCAGGAATTAACATGGATACCGTaGAGATGCATTTGGATCAAC | + |
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Preference number: 2 (lower is better) Translates to: HLPGLGAGHASSHRQSQELTWIP*RCIWIN Trigger: GTTGATCCAAATGCATCTTCACGGTATCCATGTTAA...TTCCTGGGACTGCCTGTGGCTTGAGGCATGGCCTGCACCTAGGCCTGGCAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR TCA 90 bp | CACCTGCCAGGCCTAGGTGCAGGCCATGCCTCAAGCCACAGGCAGTCCCAGGAAACACTTCAAAAGCTTTaGTTGGGCAAACCTAGTTCT | + |
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Preference number: 2 (lower is better) Translates to: HLPGLGAGHASSHRQSQETLQKL*LGKPSS Trigger: AGAACTAGGTTTGCCCAATCAAAGCTTTTGAAGTGT...TTCCTGGGACTGCCTGTGGCTTGAGGCATGGCCTGCACCTAGGCCTGGCAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR GCA 90 bp | CACCTGCCAGGCCTAGGTGCAGGCCATGCCTCAAGCCACAGGCAGTCCCAGGAATTACTACGCCTCTTTTaGATAAGGAAACCTAGATTG | + |
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Preference number: 2 (lower is better) Translates to: HLPGLGAGHASSHRQSQELLRLF*IRKPRL Trigger: CAATCTAGGTTTCCTTATGCAAAAGAGGCGTAGTAA...TTCCTGGGACTGCCTGTGGCTTGAGGCATGGCCTGCACCTAGGCCTGGCAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR GCA 90 bp | CGCGCGCGCACACACACACACAGGCCAGGTCACTGGATTCTCTTTTGTAAAGAGATTACCTCCATCCTCTaGAGTGGATGGTCAGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: RARTHTHRPGHWILFCKEITSIL*SGWSAH Trigger: GTGAGCTGACCATCCACTGCAGAGGATGGAGGTAAT...CTCTTTACAAAAGAGAATCCAGTGACCTGGCCTGTGTGTGTGTGTGCGCGCGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR CAA 90 bp | AGAGCAAAAGAAAAAGACTGCTTCCATTTAGGTTACAGCCTGCGCTaGCCCTTCAGTGCCCTCTGCCAAGGCCGGGTTTCACGTTACCCA | + |
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Preference number: 2 (lower is better) Translates to: RAKEKDCFHLGYSLR*PFSALCQGRVSRYP Trigger: TGGGTAACGTGAAACCCGGCCTTGGCAGAGGGCACTGAAGGGCAAGCGCAGGCTGTAACCTAAATGGAAGCAGTCTTTTTCTTTTGCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR CAA 90 bp | TCTGCGCGCTCAAGGGTAAAGATGCTGTTTTCAGCCCAGCTGCCCTaGACTGAGAAACAGAACAGAGAACCAACTCGGAAAGCAGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: SARSRVKMLFSAQLP*TEKQNREPTRKAGQ Trigger: CTGACCTGCTTTCCGAGTTGGTTCTCTGTTCTGTTTCTCAGTCAAGGGCAGCTGGGCTGAAAACAGCATCTTTACCCTTGAGCGCGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR TCA 90 bp | GGAATGCAATGGCTACTTTTGAAGGGATTGGTGGAGAGCGGTCAGTGGACTCCACCTATTGCATCTCCCTaGGTGGCACTCAACTATGGG | + |
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Preference number: 2 (lower is better) Translates to: GMQWLLLKGLVESGQWTPPIASP*VALNYG Trigger: CCCATAGTTGAGTGCCACTCAGGGAGATGCAATAGG...TGGAGTCCACTGACCGCTCTCCACCAATCCCTTCAAAAGTAGCCATTGCATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR CCA 90 bp | GCGCGCACACACACACACAGGCCAGGTCACTGGATTCTCTTTTGTAAAGAGCACGCTCACGATAGTCTGTaGACCTATTCCAATGGGTAC | + |
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Preference number: 2 (lower is better) Translates to: ARTHTHRPGHWILFCKEHAHDSL*TYSNGY Trigger: GTACCCATTGGAATAGGTCCACAGACTATCGTGAGC...GTGCTCTTTACAAAAGAGAATCCAGTGACCTGGCCTGTGTGTGTGTGTGCGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR CCA 90 bp | CACATTGAAATGACTGACCGAGGAGCAGCACCTTTCTACCACGGTAAGGCTGAAGCTGAGGAGAGCGCCTaGAACACTTTTCATACGCTG | + |
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Preference number: 2 (lower is better) Translates to: HIEMTDRGAAPFYHGKAEAEESA*NTFHTL Trigger: CAGCGTATGAAAAGTGTTCCAGGCGCTCTCCTCAGC...TTCAGCCTTACCGTGGTAGAAAGGTGCTGCTCCTCGGTCAGTCATTTCAATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR CCA 90 bp | CTGACCGAGGAGCAGCACCTTTCTACCACGGTAAGGCTGAAGGGTGAGCCTGAAGGTAGCTCGGATCTTTaGATTTTTACGGTCACTGAA | + |
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Preference number: 2 (lower is better) Translates to: LTEEQHLSTTVRLKGEPEGSSDL*IFTVTE Trigger: TTCAGTGACCGTAAAAATCCAAAGATCCGAGCTACC...TTCAGGCTCACCCTTCAGCCTTACCGTGGTAGAAAGGTGCTGCTCCTCGGTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCTTGACTGAGAAACAGAACAGAGAACCAACTCGGAAAGCAGGTCAGAGTAAGCTTCCTGACATCTaGAGTGCAAGGTTACCTGGC | + |
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Preference number: 2 (lower is better) Translates to: LPLTEKQNREPTRKAGQSKLPDI*SARLPG Trigger: GCCAGGTAACCTTGCACTTCAGATGTCAGGAAGCTT...ACTCTGACCTGCTTTCCGAGTTGGTTCTCTGTTCTGTTTCTCAGTCAAGGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR GCA 90 bp | AATGGTTCCACTGGCTACTCTCTTCTCCTGAAATCCCTGAATTTCCCAGCTGTGCAATCTCAGAGACTGTaGCGAGCTCAGATCCCATGT | + |
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Preference number: 2 (lower is better) Translates to: NGSTGYSLLLKSLNFPAVQSQRL*RAQIPC Trigger: ACATGGGATCTGAGCTCGGCACAGTCTCTGAGATTG...CACAGCTGGGAAATTCAGGGATTTCAGGAGAAGAGAGTAGCCAGTGGAACCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR GCA 90 bp | GTAGCTCGGATCTTTGGATTTTTACGGTCACTGAACAAAGTAGCAATTGAGATGCTGGACTCAGCCCTCTaGACAGGGCCAGACCTGACA | + |
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Preference number: 2 (lower is better) Translates to: VARIFGFLRSLNKVAIEMLDSAL*TGPDLT Trigger: TGTCAGGTCTGGCCCTGTGCAGAGGGCTGAGTCCAG...CATCTCAATTGCTACTTTGTTCAGTGACCGTAAAAATCCAAAGATCCGAGCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR CCA 90 bp | GCGCGCACACACACACACAGGCCAGGTCACTGGATTCTCTTTTGTAAAGAGCACATCTGGGGAATGCAATaGCTACTTTTGAAGGGATTG | + |
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Preference number: 2 (lower is better) Translates to: ARTHTHRPGHWILFCKEHIWGMQ*LLLKGL Trigger: CAATCCCTTCAAAAGTAGCCATTGCATTCCCCAGAT...GTGCTCTTTACAAAAGAGAATCCAGTGACCTGGCCTGTGTGTGTGTGTGCGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR CCA 90 bp | AGATTCAGTACAAGGATGTCTGGGGCATATGTGAGCAGCACAAAAGGCAGGCTTACTCCCCCTGCAACTTaGAGAGAGGAAGTGGAATTC | + |
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Preference number: 2 (lower is better) Translates to: RFSTRMSGAYVSSTKGRLTPPAT*REEVEF Trigger: GAATTCCACTTCCTCTCTCCAAGTTGCAGGGGGAGT...AAGCCTGCCTTTTGTGCTGCTCACATATGCCCCAGACATCCTTGTACTGAATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCTTGACTGAGAAACAGAACAGAGAACCAACTCGGAAAGCAGGTCAGAGTCTTGGAGAGAGGAAGTaGAATTCGAGAATGGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LPLTEKQNREPTRKAGQSLGERK*NSRMVP Trigger: TGGAACCATTCTCGAATTCCACTTCCTCTCTCCAAG...ACTCTGACCTGCTTTCCGAGTTGGTTCTCTGTTCTGTTTCTCAGTCAAGGGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR CAA 90 bp | TATTGCATCTCCCTGAGTGGCACTCAACTATGGGTCCTTTTAGGGTaGGCTCACGATAGTCTGTGGACCTATTCCAATGGGTACAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: YCISLSGTQLWVLLG*AHDSLWTYSNGYKK Trigger: CTTTTTGTACCCATTGGAATAGGTCCACAGACTATCGTGAGCCAACCCTAAAAGGACCCATAGTTGAGTGCCACTCAGGGAGATGCAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCTTGACTGAGAAACAGAACAGAGAACCAACTCGGAAAGCAGGTCAGAGTATCTTAGAAAGATGGTaGGAAGTCACGCCTCCTATT | + |
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Preference number: 2 (lower is better) Translates to: LPLTEKQNREPTRKAGQSILERW*EVTPPI Trigger: AATAGGAGGCGTGACTTCTCACCATCTTTCTAAGAT...ACTCTGACCTGCTTTCCGAGTTGGTTCTCTGTTCTGTTTCTCAGTCAAGGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR GCA 90 bp | GCTTGCTTTGGGCCAGCAATTAACACTGTTTTCCTTCCAAAGTGCAGAATAGAAAGTCACGCCTCCTATTaGATCTCCCTGAGTGGCACT | + |
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Preference number: 2 (lower is better) Translates to: ACFGPAINTVFLPKCRIESHASY*ISLSGT Trigger: AGTGCCACTCAGGGAGATGCAATAGGAGGCGTGACT...TTCTATTCTGCACTTTGGAAGGAAAACAGTGTTAATTGCTGGCCCAAAGCAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR CAA 90 bp | AAGATGATGCCAGAAATTTTCCAGTGTCTTACTTGTCCCCAAGCCTaGTCACAGCTGAAGCAGTCCTGCTTTCCGCTTCTATTAGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: KMMPEIFQCLTCPQA*SQLKQSCFPLLLAS Trigger: ACTTGCTAATAGAAGCGGAAAGCAGGACTGCTTCAGCTGTGACAAGGCTTGGGGACAAGTAAGACACTGGAAAATTTCTGGCATCATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR CAA 90 bp | GAGCAGGTAGGCACAACTCTAGTGCAGACATCCACAAACCAGGGCTaGAATCTTAAAAATGGAGCTTTGGTCAACGCCACTTTTCACTAT | + |
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Preference number: 2 (lower is better) Translates to: EQVGTTLVQTSTNQG*NLKNGALVNATFHY Trigger: ATAGTGAAAAGTGGCGTTGACCAAAGCTCCATTTTTAAGATTCAAGCCCTGGTTTGTGGATGTCTGCACTAGAGTTGTGCCTACCTGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCTTGACTGAGAAACAGAACAGAGAACCAACTCGGAAAGCAGGTCAGAGTAGCAGTTTTCAAAGTTaGGTTCGTTTTTCATTACCT | + |
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Preference number: 2 (lower is better) Translates to: LPLTEKQNREPTRKAGQSSSFQS*VRFSLP Trigger: AGGTAATGAAAAACGAACCCAACTTTGAAAACTGCT...ACTCTGACCTGCTTTCCGAGTTGGTTCTCTGTTCTGTTTCTCAGTCAAGGGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR CAA 90 bp | CAGTGGATGGTCAGCTCACCTTCCTATATAAACACACATGAGAATTaGCACCAAATCTCAACAGCCAGGCAAAACTCTAGAACTCAAAAC | + |
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Preference number: 2 (lower is better) Translates to: QWMVSSPSYINTHEN*HQISTARQNSRTQN Trigger: GTTTTGAGTTCTAGAGTTTTGCCTGGCTGTTGAGATTTGGTGCAAATTCTCATGTGTGTTTATATAGGAAGGTGAGCTGACCATCCACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR TCA 90 bp | GTAGCTCGGATCTTTGGATTTTTACGGTCACTGAACAAAGTAGCAATTGAGATGCACAACTTAGTCCCGTaGGTGAAAATTCAGTCACAA | + |
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Preference number: 2 (lower is better) Translates to: VARIFGFLRSLNKVAIEMHNLVP*VKIQSQ Trigger: TTGTGACTGAATTTTCACTCACGGGACTAAGTTGTG...CATCTCAATTGCTACTTTGTTCAGTGACCGTAAAAATCCAAAGATCCGAGCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR CCA 90 bp | TTTCATTACCTTCCTTTTAACCCTGAAACAGCTCAGGTCTCCTCACAAAACCCACAAGTCTCCAGCTATTaGCTTTGGTTTATTGATGAA | + |
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Preference number: 2 (lower is better) Translates to: FHYLPFNPETAQVSSQNPQVSSY*LWFIDE Trigger: TTCATCAATAAACCAAAGCCAATAGCTGGAGACTTG...TGGGTTTTGTGAGGAGACCTGAGCTGTTTCAGGGTTAAAAGGAAGGTAATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGAAAGCTCTGGTCCATCAGGTTCTAATACATTTGCACTGATAAGAAATCTCAGCCTCTTAAGGTCATaGATGACCAGCAGTTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: TESSGPSGSNTFALIRNLSLLRS*MTSSFQ Trigger: TTGAAAACTGCTGGTCATCCATGACCTTAAGAGGCT...GAGATTTCTTATCAGTGCAAATGTATTAGAACCTGATGGACCAGAGCTTTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR-3UTR CCA 90 bp | GTAGCTCGGATCTTTGGATTTTTACGGTCACTGAACAAAGTAGCAATTGAGATGGTGGACCTATTCCAATaGGTACAAAAAGAAAAACAG | + |
|
Preference number: 2 (lower is better) Translates to: VARIFGFLRSLNKVAIEMVDLFQ*VQKEKQ Trigger: CTGTTTTTCTTTTTGTACCCATTGGAATAGGTCCAC...CATCTCAATTGCTACTTTGTTCAGTGACCGTAAAAATCCAAAGATCCGAGCTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR GCA 72 bp | AGGAAGATCACTCTTGACTCTCTGGACTCAGCCCTCTaGACAGGGCCAGACCTGACACTAAACCCCTACTCC | + |
|
Preference number: 3 (lower is better) Translates to: RKITLDSLDSAL*TGPDLTLNPYS Trigger: GGAGTAGGGGTTTAGTGTCAGGTCTGGCCCTGTGCAGAGGGCTGAGTCCAGAGAGTCAAGAGTGATCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR GCA 72 bp | GGTGAGCCTGAAGCTCCAAGCCAAACCCCGAGAGTGTaGATCTGCGCGCTCAAGGGTAAAGATGCTGTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: GEPEAPSQTPRV*ICALKGKDAVF Trigger: GAAAACAGCATCTTTACCCTTGAGCGCGCAGATGCACACTCTCGGGGTTTGGCTTGGAGCTTCAGGCTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR CCA 72 bp | AAAGGGACCGATCAAGGTGGGGCCGTCATCCAGTGGTaGTTTACAACTCCTGTGTCTCCTCTCTCCATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: KGTDQGGAVIQW*FTTPVSPLSIL Trigger: GAGGATGGAGAGAGGAGACACAGGAGTTGTAAACCACCACTGGATGACGGCCCCACCTTGATCGGTCCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR CCA 72 bp | CTAGCCCTCCATGAAGGGCTAGTGTCAGAGGTCAGCTaGAAGGAGAGCAGACTGTGGGCTTTAGCAAGTCGA | + |
|
Preference number: 3 (lower is better) Translates to: LALHEGLVSEVS*KESRLWALASR Trigger: TCGACTTGCTAAAGCCCACAGTCTGCTCTCCTTCCAGCTGACCTCTGACACTAGCCCTTCATGGAGGGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR GCA 72 bp | ACAGGGCCAGACCTGACACTAAACCCCTACTCCCCCTaGAACTTGGAGAGAGGAAGTGGAATTCGAGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: TGPDLTLNPYSP*NLERGSGIREW Trigger: CCATTCTCGAATTCCACTTCCTCTCTCCAAGTTGCAGGGGGAGTAGGGGTTTAGTGTCAGGTCTGGCCCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR CCA 72 bp | CTAAAAGGGACCGATCAAGGTGGGGCCGTCATCCAGTaGTGGTTTACAACTCCTGTGTCTCCTCTCTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: LKGTDQGGAVIQ*WFTTPVSPLSI Trigger: GATGGAGAGAGGAGACACAGGAGTTGTAAACCACCACTGGATGACGGCCCCACCTTGATCGGTCCCTTTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGACCGAGGAGCAGCACCTTTCTACCACGGTAAGGCTGAAGGGTGAGCCTGAAATGCAATGGCTACTTTaGAAGGGATTGGTGGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LTEEQHLSTTVRLKGEPEMQWLL*KGLVES Trigger: GCTCTCCACCAATCCCTTCAAAAGTAGCCATTGCAT...TTCAGGCTCACCCTTCAGCCTTACCGTGGTAGAAAGGTGCTGCTCCTCGGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR CCA 72 bp | GCCTCCTATTGCATCTCCCTGAGTGGCACTCAACTATaGGTCCTTTTAGGGTTGGCTCACGATAGTCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: ASYCISLSGTQL*VLLGLAHDSLW Trigger: CCACAGACTATCGTGAGCCAACCCTAAAAGGACCCATAGTTGAGTGCCACTCAGGGAGATGCAATAGGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR CCA 72 bp | GGTGAGAAGTCACGCCTCCTATTGCATCTCCCTGAGTaGCACTCAACTATGGGTCCTTTTAGGGTTGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GEKSRLLLHLPE*HSTMGPFRVGS Trigger: TGAGCCAACCCTAAAAGGACCCATAGTTGAGTGCCACTCAGGGAGATGCAATAGGAGGCGTGACTTCTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR TCA 72 bp | CTGTGGAAACAATCTGGGGAATGCAATGGCTACTTTTaGAGGGATTGGTGGAGAGCGGTCAGTGGACTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LWKQSGECNGYF*RDWWRAVSGLQ Trigger: CTGGAGTCCACTGACCGCTCTCCACCAATCCCTTCAAAAGTAGCCATTGCATTCCCCAGATTGTTTCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR TCA 72 bp | AGGCCATGCCTCAAGCCACAGGCAGTCCCAGGAATCTaGCTTAGAGGCATGAGGAGTCACATTGAAATGACT | + |
|
Preference number: 3 (lower is better) Translates to: RPCLKPQAVPGI*LRGMRSHIEMT Trigger: AGTCATTTCAATGTGACTCCTCATGCCTCTAAGTCAGATTCCTGGGACTGCCTGTGGCTTGAGGCATGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR CCA 72 bp | AAACCCCTACTCCCCCTGCAACTTGGAGAGAGGAAGTaGAATTCGAGAATGGTTCCACTGGCTACTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: KPLLPLQLGERK*NSRMVPLATLF Trigger: GAAGAGAGTAGCCAGTGGAACCATTCTCGAATTCCACTTCCTCTCTCCAAGTTGCAGGGGGAGTAGGGGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR TCA 72 bp | GAGCAGCACAAAAGGCAGGCTTCAGATAAAGCTTCCTaGCATCTGAAGTGCAAGGTTACCTGGCCTGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: EQHKRQASDKAS*HLKCKVTWPVL Trigger: CAGAACAGGCCAGGTAACCTTGCACTTCAGATGTCAGGAAGCTTTATCTGAAGCCTGCCTTTTGTGCTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR TCA 72 bp | GGTAAAGATGCTGTTTTCAGCCCAGCTGCCCTTGACTaGGAAACAGAACAGAGAACCAACTCGGAAAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GKDAVFSPAALD*ETEQRTNSESR Trigger: CCTGCTTTCCGAGTTGGTTCTCTGTTCTGTTTCTCAGTCAAGGGCAGCTGGGCTGAAAACAGCATCTTTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR CCA 72 bp | GGGAGTGACGTGCATAAAGGGCTTCCAATTAAAAGGTaGGAAGAACCTCCTGTCAGTCAAGTCAGTCACGAC | + |
|
Preference number: 3 (lower is better) Translates to: GSDVHKGLPIKR*EEPPVSQVSHD Trigger: GTCGTGACTGACTTGACTGACAGGAGGTTCTTCCCACCTTTTAATTGGAAGCCCTTTATGCACGTCACTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR CCA 72 bp | CCCTGCAACTTGGAGAGAGGAAGTGGAATTCGAGAATaGTTCCACTGGCTACTCTCTTCTCCTGAAATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PCNLERGSGIRE*FHWLLSSPEIP Trigger: AGGGATTTCAGGAGAAGAGAGTAGCCAGTGGAACCATTCTCGAATTCCACTTCCTCTCTCCAAGTTGCAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR CCA 72 bp | CTAGTGTCAGAGGTCAGCTGGAAGGAGAGCAGACTGTaGGCTTTAGCAAGTCGACTATTAGTGCATTACCAC | + |
|
Preference number: 3 (lower is better) Translates to: LVSEVSWKESRL*ALASRLLVHYH Trigger: GTGGTAATGCACTAATAGTCGACTTGCTAAAGCCCACAGTCTGCTCTCCTTCCAGCTGACCTCTGACACTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTCATTACCTTCCTTTTAACCCTGAAACAGCTCAGGTCTCCTCACAAAACCCAAAGTCACGCCTCCTATaGCATCTCCCTGAGTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: FHYLPFNPETAQVSSQNPKSRLL*HLPEWH Trigger: GTGCCACTCAGGGAGATGCAATAGGAGGCGTGACTT...TGGGTTTTGTGAGGAGACCTGAGCTGTTTCAGGGTTAAAAGGAAGGTAATGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTCAGTACAAGGATGTCTGGGGCATATGTGAGCAGCACAAAAGGCAGGCTTCACTTCAGAAATCAAGCTaGCTGGCTACACTGAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: IQYKDVWGICEQHKRQASLQKSS*LATLSI Trigger: GATGCTCAGTGTAGCCAGCAAGCTTGATTTCTGAAG...TGAAGCCTGCCTTTTGTGCTGCTCACATATGCCCCAGACATCCTTGTACTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR TCA 72 bp | CCTGGGAGACCAAAGCAGCACATTCCAGAAGCAACTTaGAAACACAGCACTAGGAAAAAGCCAGCCATTTCA | + |
|
Preference number: 3 (lower is better) Translates to: PGRPKQHIPEAT*KHSTRKKPAIS Trigger: TGAAATGGCTGGCTTTTTCCTAGTGCTGTGTTTTCAAGTTGCTTCTGGAATGTGCTGCTTTGGTCTCCCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR GCA 72 bp | TATCTTAGAAAGATGGTGAGAAGTCACGCCTCCTATTaGATCTCCCTGAGTGGCACTCAACTATGGGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: YLRKMVRSHASY*ISLSGTQLWVL Trigger: AAGGACCCATAGTTGAGTGCCACTCAGGGAGATGCAATAGGAGGCGTGACTTCTCACCATCTTTCTAAGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR CCA 72 bp | TTGGAGAGAGGAAGTGGAATTCGAGAATGGTTCCACTaGCTACTCTCTTCTCCTGAAATCCCTGAATTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LERGSGIREWFH*LLSSPEIPEFP Trigger: GGGAAATTCAGGGATTTCAGGAGAAGAGAGTAGCCAGTGGAACCATTCTCGAATTCCACTTCCTCTCTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTCATTACCTTCCTTTTAACCCTGAAACAGCTCAGGTCTCCTCACAAAACCCATGTGGACTGCTTGCTTaGGGCCAGCAATTAACACTG | + |
|
Preference number: 3 (lower is better) Translates to: FHYLPFNPETAQVSSQNPCGLLA*GQQLTL Trigger: CAGTGTTAATTGCTGGCCCAAAGCAAGCAGTCCACA...TGGGTTTTGTGAGGAGACCTGAGCTGTTTCAGGGTTAAAAGGAAGGTAATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTCAGTACAAGGATGTCTGGGGCATATGTGAGCAGCACAAAAGGCAGGCTTCACCAGCCATTTCATTTTaGTTACTACGCCTCTTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: IQYKDVWGICEQHKRQASPAISF*LLRLFC Trigger: GCAAAAGAGGCGTAGTAACAAAAATGAAATGGCTGG...TGAAGCCTGCCTTTTGTGCTGCTCACATATGCCCCAGACATCCTTGTACTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR GCA 72 bp | ATAGAAGAAAGTGCTCACAACGCTGGTTTTGAGTGGTaGCATTTCCCAAGACTGAAGCTATCTATACTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: IEESAHNAGFEW*HFPRLKLSILG Trigger: ACCCAGTATAGATAGCTTCAGTCTTGGGAAATGGCACCACTCAAAACCAGCGTTGTGAGCACTTTCTTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAAAGCTCTGGTCCATCAGGTTCTAATACATTTGCACTGATAAGAAATCTCTACTCCCCCTGCAACTaGGAGAGAGGAAGTGGAATT | + |
|
Preference number: 3 (lower is better) Translates to: TESSGPSGSNTFALIRNLYSPCN*ERGSGI Trigger: AATTCCACTTCCTCTCTCCAAGTTGCAGGGGGAGTA...GAGATTTCTTATCAGTGCAAATGTATTAGAACCTGATGGACCAGAGCTTTCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR-3UTR CAA 90 bp | AGATTCAGTACAAGGATGTCTGGGGCATATGTGAGCAGCACAAAAGGCAGGCTTCAAACACATTCTCTTTaGATTACAACTGTAGCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RFSTRMSGAYVSSTKGRLQTHSL*ITTVAS Trigger: AGAGGCTACAGTTGTAATCAAAAGAGAATGTGTTTG...AAGCCTGCCTTTTGTGCTGCTCACATATGCCCCAGACATCCTTGTACTGAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR TCA 72 bp | TACATTCAGGGAGGCTCCAACACACTTCAAAAGCTTTaGTTGGGCAAACCTAGTTCTGTGCAAACACATTCT | + |
|
Preference number: 3 (lower is better) Translates to: YIQGGSNTLQKL*LGKPSSVQTHS Trigger: AGAATGTGTTTGCACAGAACTAGGTTTGCCCAATCAAAGCTTTTGAAGTGTGTTGGAGCCTCCCTGAATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR CCA 72 bp | TTCAGGGAGGCTCCAACACACTTCAAAAGCTTTGATTaGGCAAACCTAGTTCTGTGCAAACACATTCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: FREAPTHFKSFD*ANLVLCKHILF Trigger: AAAGAGAATGTGTTTGCACAGAACTAGGTTTGCCCAATCAAAGCTTTTGAAGTGTGTTGGAGCCTCCCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR CCA 72 bp | TCAATAGAAGAAAGTGCTCACAACGCTGGTTTTGAGTaGTGCCATTTCCCAAGACTGAAGCTATCTATACTG | + |
|
Preference number: 3 (lower is better) Translates to: SIEESAHNAGFE*CHFPRLKLSIL Trigger: CAGTATAGATAGCTTCAGTCTTGGGAAATGGCACCACTCAAAACCAGCGTTGTGAGCACTTTCTTCTATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR TCA 72 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCACTATaGCACAAATTCCAAATTAAGTCAGACAGGAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: ERERERERERSL*HKFQIKSDRRE Trigger: TTCTCTCCTGTCTGACTTAATTTGGAATTTGTGTCATAGTGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR TCA 72 bp | AAGATCAATAGAAGAAAGTGCTCACAACGCTGGTTTTaGGTGGTGCCATTTCCCAAGACTGAAGCTATCTAT | + |
|
Preference number: 3 (lower is better) Translates to: KINRRKCSQRWF*VVPFPKTEAIY Trigger: ATAGATAGCTTCAGTCTTGGGAAATGGCACCACTCAAAACCAGCGTTGTGAGCACTTTCTTCTATTGATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR TCA 72 bp | CTTTGGATTTTTACGGTCACTGAACAAAGTAGCAATTaGGATGGTGGATGTGATGGAGTCACTTCAGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: LWIFTVTEQSSN*DGGCDGVTSEI Trigger: GATTTCTGAAGTGACTCCATCACATCCACCATCTCAATTGCTACTTTGTTCAGTGACCGTAAAAATCCAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR GCA 72 bp | AAGCCAGCCATTTCATTTTTGTTACTACGCCTCTTTTaGATAAGGAAACCTAGATTGCTTAAAGCGGACACA | + |
|
Preference number: 3 (lower is better) Translates to: KPAISFLLLRLF*IRKPRLLKADT Trigger: TGTGTCCGCTTTAAGCAATCTAGGTTTCCTTATGCAAAAGAGGCGTAGTAACAAAAATGAAATGGCTGGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAAAGCTCTGGTCCATCAGGTTCTAATACATTTGCACTGATAAGAAATCTCATAAGGAAACCTAGATaGCTTAAAGCGGACACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TESSGPSGSNTFALIRNLIRKPR*LKADTK Trigger: CTTTGTGTCCGCTTTAAGCAATCTAGGTTTCCTTAT...GAGATTTCTTATCAGTGCAAATGTATTAGAACCTGATGGACCAGAGCTTTCAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR CCA 72 bp | TTCTCTTTTGATTACAACTGTAGCCTCTTAAGGTCATaGATGACCAGCAGTTTTCAAAGTTGGGTTCGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: FSFDYNCSLLRS*MTSSFQSWVRF Trigger: AAAACGAACCCAACTTTGAAAACTGCTGGTCATCCATGACCTTAAGAGGCTACAGTTGTAATCAAAAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS-3UTR TCA 90 bp | CACCTGCCAGGCCTAGGTGCAGGCCATGCCTCAAGCCACAGGCAGTCCCAGGAAAGGCCAGGAGAGAGATaGGGTTCAGGGTCTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLPGLGAGHASSHRQSQERPGER*GSGSAC Trigger: GCAGGCAGACCCTGAACCTCATCTCTCTCCTGGCCT...TTCCTGGGACTGCCTGTGGCTTGAGGCATGGCCTGCACCTAGGCCTGGCAGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS-3UTR CCA 90 bp | CACCTGCCAGGCCTAGGTGCAGGCCATGCCTCAAGCCACAGGCAGTCCCAGGAAAGGACTCAGAGTCCTTaGTACTGCTGCCCTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLPGLGAGHASSHRQSQERTQSP*YCCPPL Trigger: CAGAGGAGGGCAGCAGTACCAAGGACTCTGAGTCCT...TTCCTGGGACTGCCTGTGGCTTGAGGCATGGCCTGCACCTAGGCCTGGCAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS-3UTR GCA 90 bp | CGCGCGCGCACACACACACACAGGCCAGGTCACTGGATTCTCTTTTGTAAAGAGCTGCACGTTGATGCCTaGCTCCTCCAGCCGGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RARTHTHRPGHWILFCKELHVDA*LLQPAS Trigger: CGAGGCCGGCTGGAGGAGGCAGGCATCAACGTGCAG...CTCTTTACAAAAGAGAATCCAGTGACCTGGCCTGTGTGTGTGTGTGCGCGCGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS-3UTR TCA 90 bp | GCGCGCACACACACACACAGGCCAGGTCACTGGATTCTCTTTTGTAAAGAGCACTGCAGCCGGCTAACCTaGTCCCAGTTGAGCACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ARTHTHRPGHWILFCKEHCSRLT*SQLSTL Trigger: CAGCGTGCTCAACTGGGATCAGGTTAGCCGGCTGCA...GTGCTCTTTACAAAAGAGAATCCAGTGACCTGGCCTGTGTGTGTGTGTGCGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS-3UTR TCA 90 bp | AGAGTCGGAGCTGAGTTCCCCTTCGAAAGCCAAACACCTACATCTAGAAAGAGGGGACGTCCTGCACGTTaGTGCCTGCCTCCTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RVGAEFPFESQTPTSRKRGRPAR*CLPPPA Trigger: GGCTGGAGGAGGCAGGCATCAACGTGCAGGACGTCC...CCTCTTTCTAGATGTAGGTGTTTGGCTTTCGAAGGGGAACTCAGCTCCGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS-3UTR TCA 90 bp | CTATTGCATCTCCCTGAGTGGCACTCAACTATGGGTCCTTTTAGGGTTGGCTCACCTGGTCGGCAGGCCTaGAGTCCCGCACAAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLHLPEWHSTMGPFRVGSPGRQA*SPAQGG Trigger: ACCTCCTTGTGCGGGACTTCAGGCCTGCCGACCAGG...TGAGCCAACCCTAAAAGGACCCATAGTTGAGTGCCACTCAGGGAGATGCAATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS-3UTR TCA 90 bp | GCGCGCACACACACACACAGGCCAGGTCACTGGATTCTCTTTTGTAAAGAGCACAACGCTCCAGGGTCTTaGTCTCCTCCTGGTCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ARTHTHRPGHWILFCKEHNAPGS*SPPGRQ Trigger: CTGCCGACCAGGAGGAGATCAAGACCCTGGAGCGTT...GTGCTCTTTACAAAAGAGAATCCAGTGACCTGGCCTGTGTGTGTGTGTGCGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS-3UTR GCA 90 bp | AAGGGTGAGCCTGAAGCTCCAAGCCAAACCCCGAGAGTGTGCATCTGCGCGCTCGCTCGGAGATGGGATTaGCGGAGCAGTCATAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KGEPEAPSQTPRVCICALARRWD*RSSHRK Trigger: TTTTCTATGACTGCTCCGGCAATCCCATCTCCGAGC...GAGCGCGCAGATGCACACTCTCGGGGTTTGGCTTGGAGCTTCAGGCTCACCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS-3UTR GCA 90 bp | CGCGCGCGCACACACACACACAGGCCAGGTCACTGGATTCTCTTTTGTAAAGAGGTCTCCAGCTTCCTCTaGTGTTCCAGGATGTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RARTHTHRPGHWILFCKEVSSFL*CSRMSG Trigger: CCCCGACATCCTGGAACAGCAGAGGAAGCTGGAGAC...CTCTTTACAAAAGAGAATCCAGTGACCTGGCCTGTGTGTGTGTGTGCGCGCGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS-3UTR GCA 90 bp | CGCGCGCGCACACACACACACAGGCCAGGTCACTGGATTCTCTTTTGTAAAGAGATGAGGTTCAGGGTCTaGCTGCGTTCGTGCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RARTHTHRPGHWILFCKEMRFRV*LRSCPM Trigger: CATGGGGCACGAACGCAGGCAGACCCTGAACCTCAT...CTCTTTACAAAAGAGAATCCAGTGACCTGGCCTGTGTGTGTGTGTGCGCGCGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS-3UTR CCA 90 bp | CAAACACCTACATCTAGAAAGAGGCTCTCCTACCTGAGAGCCCCTGCCCTAACCAAGTTGCCTCGCCCGTaGATGGGCACGACCTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QTPTSRKRLSYLRAPALTKLPRP*MGTTSV Trigger: GACTGAGGTCGTGCCCATCCACGGGCGAGGCAACTT...GGTTAGGGCAGGGGCTCTCAGGTAGGAGAGCCTCTTTCTAGATGTAGGTGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS-3UTR TCA 90 bp | CAAACACCTACATCTAGAAAGAGGCTCTCCTACCTGAGAGCCCCTGCCCTAACCGCTGGTAGTAACAGGTaGCGTTGGTGGCACTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTPTSRKRLSYLRAPALTAGSNR*RWWHWG Trigger: TCCCCAGTGCCACCAACGTCACCTGTTACTACCAGC...GGTTAGGGCAGGGGCTCTCAGGTAGGAGAGCCTCTTTCTAGATGTAGGTGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTCGGAGCTGAGTTCCCCTTCGAAAGCCAAACACCTACATCTAGAAAGAGGTGCCTCGCCCGTGGATaGGCACGACCTCAGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RVGAEFPFESQTPTSRKRCLARG*ARPQSG Trigger: TCCTGACTGAGGTCGTGCCCATCCACGGGCGAGGCA...CCTCTTTCTAGATGTAGGTGTTTGGCTTTCGAAGGGGAACTCAGCTCCGACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR GCA 90 bp | TGGGTCCTTTTAGGGTTGGCTCACGATAGTCTGTGGACCTATTCCAATGGGTACTTCAGCCGGACGTCCTaGACGTTGATGCCTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WVLLGLAHDSLWTYSNGYFSRTS*TLMPAS Trigger: GGAGGCAGGCATCAACGTGCAGGACGTCCGGCTGAA...GTACCCATTGGAATAGGTCCACAGACTATCGTGAGCCAACCCTAAAAGGACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR GCA 90 bp | AGATTCAGTACAAGGATGTCTGGGGCATATGTGAGCAGCACAAAAGGCAGGCTTCAAAACGTGGCCGGCTaGAGAGCCGTTCAGCCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RFSTRMSGAYVSSTKGRLQNVAG*RAVQPD Trigger: GTCCGGCTGAACGGCTCTGCAGCCGGCCACGTTTTG...AAGCCTGCCTTTTGTGCTGCTCACATATGCCCCAGACATCCTTGTACTGAATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR CCA 90 bp | CTGACCGAGGAGCAGCACCTTTCTACCACGGTAAGGCTGAAGGGTGAGCCTGAACTTCAGGGTTCTTGGTaGCGATCAGCCTGTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LTEEQHLSTTVRLKGEPELQGSW*RSACSE Trigger: TTCAGAACAGGCTGATCGCCACCAAGAACCCTGAAG...TTCAGGCTCACCCTTCAGCCTTACCGTGGTAGAAAGGTGCTGCTCCTCGGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR CAA 72 bp | GAAAAAGACTGCTTCCATTTAGGTTACAGCCTGCGCTaGCCCTTCAGTGCCCTCTGCCAAGGCCGGGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EKDCFHLGYSLR*PFSALCQGRVS Trigger: TGAAACCCGGCCTTGGCAGAGGGCACTGAAGGGCAAGCGCAGGCTGTAACCTAAATGGAAGCAGTCTTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR TCA 90 bp | GGAATGCAATGGCTACTTTTGAAGGGATTGGTGGAGAGCGGTCAGTGGACTCCAACATCTCTCACCAGCTaGAATTCCGCCTCTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GMQWLLLKGLVESGQWTPTSLTS*NSASVG Trigger: CCCCACAGAGGCGGAATTTCAGCTGGTGAGAGATGT...TGGAGTCCACTGACCGCTCTCCACCAATCCCTTCAAAAGTAGCCATTGCATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR TCA 90 bp | GCGCGCACACACACACACAGGCCAGGTCACTGGATTCTCTTTTGTAAAGAGCACTGGTGGCACTGGGGATaGTGTTTTGTTCTGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ARTHTHRPGHWILFCKEHWWHWG*CFVLPA Trigger: TGCTGGCAGAACAAAACATCATCCCCAGTGCCACCA...GTGCTCTTTACAAAAGAGAATCCAGTGACCTGGCCTGTGTGTGTGTGTGCGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR GCA 90 bp | CTGCCCTTGACTGAGAAACAGAACAGAGAACCAACTCGGAAAGCAGGTCAGAGTCCAAGGTTGGAAAGTTaGCTCGCCCGTGGATGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPLTEKQNREPTRKAGQSPRLES*LARGWA Trigger: TGCCCATCCACGGGCGAGGCAACTTTCCAACCTTGG...ACTCTGACCTGCTTTCCGAGTTGGTTCTCTGTTCTGTTTCTCAGTCAAGGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| 3UTR CAA 72 bp | CCAGACCTGACACTAAACCCCTACTCCCCCTGCAACTaGGAGAGAGGAAGTGGAATTCGAGAATGGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PDLTLNPYSPCN*ERGSGIREWFH Trigger: GTGGAACCATTCTCGAATTCCACTTCCTCTCTCCAAGTTGCAGGGGGAGTAGGGGTTTAGTGTCAGGTCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR GCA 90 bp | CTGCCCTTGACTGAGAAACAGAACAGAGAACCAACTCGGAAAGCAGGTCAGAGTACGCTGAACTCAAACTaGCGCCGGATGGAGTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: LPLTEKQNREPTRKAGQSTLNSN*RRMEST Trigger: TGTCGACTCCATCCGGCGGCAGTTTGAGTTCAGCGT...ACTCTGACCTGCTTTCCGAGTTGGTTCTCTGTTCTGTTTCTCAGTCAAGGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCCTTGACTGAGAAACAGAACAGAGAACCAACTCGGAAAGCAGGTCAGAGTCGGCCTCGGACAGTCTaGACAATGTCCTTCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LPLTEKQNREPTRKAGQSRPRTV*TMSFRV Trigger: AACCCTGAAGGACATTGTCCAGACTGTCCGAGGCCG...ACTCTGACCTGCTTTCCGAGTTGGTTCTCTGTTCTGTTTCTCAGTCAAGGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTCCTTTTAGGGTTGGCTCACGATAGTCTGTGGACCTATTCCAATGGGTACTCTTTGACCAAAACGTaGCCGGCTGCAGAGCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: WVLLGLAHDSLWTYSNGYSLTKT*PAAEPF Trigger: GAACGGCTCTGCAGCCGGCCACGTTTTGGTCAAAGA...GTACCCATTGGAATAGGTCCACAGACTATCGTGAGCCAACCCTAAAAGGACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS-3UTR CCA 90 bp | CACATTGAAATGACTGACCGAGGAGCAGCACCTTTCTACCACGGTAAGGCTGAATCTCCCCGATCACTGTaGGGTGGAAATGCTCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HIEMTDRGAAPFYHGKAESPRSL*GGNARR Trigger: TCTCCGAGCATTTCCACCCCACAGTGATCGGGGAGA...TTCAGCCTTACCGTGGTAGAAAGGTGCTGCTCCTCGGTCAGTCATTTCAATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR TCA 90 bp | TGTGGACTGCTTGCTTTGGGCCAGCAATTAACACTGTTTTCCTTCCAAAGTGCAGGAAAGAGTCCACGCTaGACTCAAACTGCCGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: CGLLALGQQLTLFSFQSAGKSPR*TQTAAG Trigger: TCCGGCGGCAGTTTGAGTTCAGCGTGGACTCTTTCC...TGCACTTTGGAAGGAAAACAGTGTTAATTGCTGGCCCAAAGCAAGCAGTCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCCTTGACTGAGAAACAGAACAGAGAACCAACTCGGAAAGCAGGTCAGAGTTCCTCCCGTTCTTGTTaGAGAGGGAAATCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPLTEKQNREPTRKAGQSSSRSC*RGKSGS Trigger: GGAGCCTGATTTCCCTCTCCAACAAGAACGGGAGGA...ACTCTGACCTGCTTTCCGAGTTGGTTCTCTGTTCTGTTTCTCAGTCAAGGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR CAA 72 bp | TCCCTGAGTGGCACTCAACTATGGGTCCTTTTAGGGTaGGCTCACGATAGTCTGTGGACCTATTCCAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLSGTQLWVLLG*AHDSLWTYSNG Trigger: CCCATTGGAATAGGTCCACAGACTATCGTGAGCCAACCCTAAAAGGACCCATAGTTGAGTGCCACTCAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR CAA 72 bp | GCTGTGGAAACAATCTGGGGAATGCAATGGCTACTTTaGAAGGGATTGGTGGAGAGCGGTCAGTGGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AVETIWGMQWLL*KGLVESGQWTP Trigger: TGGAGTCCACTGACCGCTCTCCACCAATCCCTTCAAAAGTAGCCATTGCATTCCCCAGATTGTTTCCACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR TCA 90 bp | AGATTCAGTACAAGGATGTCTGGGGCATATGTGAGCAGCACAAAAGGCAGGCTTCCCTGCGGAGAATCATaGGGTAGTCGTACTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RFSTRMSGAYVSSTKGRLPCGES*GSRTCF Trigger: GAAGCAAGTACGACTACCTCATGATTCTCCGCAGGG...AAGCCTGCCTTTTGTGCTGCTCACATATGCCCCAGACATCCTTGTACTGAATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR GCA 90 bp | AGAGTCGGAGCTGAGTTCCCCTTCGAAAGCCAAACACCTACATCTAGAAAGAGGGATGATGTTTTGTTCTaGCAGCACACGCAAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVGAEFPFESQTPTSRKRDDVLF*QHTQGQ Trigger: CTGGCCTTGCGTGTGCTGGCAGAACAAAACATCATC...CCTCTTTCTAGATGTAGGTGTTTGGCTTTCGAAGGGGAACTCAGCTCCGACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR CCA 90 bp | CTGCCCTTGACTGAGAAACAGAACAGAGAACCAACTCGGAAAGCAGGTCAGAGTACTGACGTAAGGAGCTaGCTGGTAGTAACAGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPLTEKQNREPTRKAGQSTDVRS*LVVTGD Trigger: GTCACCTGTTACTACCAGCCAGCTCCTTACGTCAGT...ACTCTGACCTGCTTTCCGAGTTGGTTCTCTGTTCTGTTTCTCAGTCAAGGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR TCA 90 bp | GCTTGCTTTGGGCCAGCAATTAACACTGTTTTCCTTCCAAAGTGCAGAATAGAACCAAGCCGTTGTCTTTaGCCAAAACGTGGCCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ACFGPAINTVFLPKCRIEPSRCL*PKRGRL Trigger: CAGCCGGCCACGTTTTGGTCAAAGACAACGGCTTGG...TTCTATTCTGCACTTTGGAAGGAAAACAGTGTTAATTGCTGGCCCAAAGCAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR TCA 90 bp | CTGCCCTTGACTGAGAAACAGAACAGAGAACCAACTCGGAAAGCAGGTCAGAGTGCAAAGAATCTAGGATaGTCTGGAAAGAGTCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLTEKQNREPTRKAGQSAKNLG*SGKSPR Trigger: GCGTGGACTCTTTCCAGATCATCCTAGATTCTTTGC...ACTCTGACCTGCTTTCCGAGTTGGTTCTCTGTTCTGTTTCTCAGTCAAGGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR GCA 90 bp | AATGGTTCCACTGGCTACTCTCTTCTCCTGAAATCCCTGAATTTCCCAGCTGTGAGCGGTCTGTGTCTGTaGAAACCTTCACCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NGSTGYSLLLKSLNFPAVSGLCL*KPSPAS Trigger: AGAAGCTGGTGAAGGTTTGCACAGACACAGACCGCT...CACAGCTGGGAAATTCAGGGATTTCAGGAGAAGAGAGTAGCCAGTGGAACCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR CCA 90 bp | TGTGGACTGCTTGCTTTGGGCCAGCAATTAACACTGTTTTCCTTCCAAAGTGCAGGTTATCTCCAAGGTTaGAAAGTTGCCTCGCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: CGLLALGQQLTLFSFQSAGYLQG*KVASPV Trigger: CACGGGCGAGGCAACTTTCCAACCTTGGAGATAACC...TGCACTTTGGAAGGAAAACAGTGTTAATTGCTGGCCCAAAGCAAGCAGTCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR CAA 72 bp | ACAGTCACCTACATCCCTCCCTGTGGACTGCTTGCTTaGGGCCAGCAATTAACACTGTTTTCCTTCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TVTYIPPCGLLA*GQQLTLFSFQS Trigger: ACTTTGGAAGGAAAACAGTGTTAATTGCTGGCCCAAAGCAAGCAGTCCACAGGGAGGGATGTAGGTGACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR CAA 72 bp | CTCCAAGATGATGCCAGAAATTTTCCAGTGTCTTACTaGTCCCCAAGCCTTGTCACAGCTGAAGCAGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQDDARNFPVSY*SPSLVTAEAVL Trigger: CAGGACTGCTTCAGCTGTGACAAGGCTTGGGGACAAGTAAGACACTGGAAAATTTCTGGCATCATCTTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR TCA 90 bp | GCTTGCTTTGGGCCAGCAATTAACACTGTTTTCCTTCCAAAGTGCAGAATAGAAGCGATCAGCCTGTTCTaGAGATGGTCAAAGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ACFGPAINTVFLPKCRIEAISLF*RWSKAS Trigger: GGAAGCCTTTGACCATCTTCAGAACAGGCTGATCGC...TTCTATTCTGCACTTTGGAAGGAAAACAGTGTTAATTGCTGGCCCAAAGCAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR CAA 72 bp | GGCACAACTCTAGTGCAGACATCCACAAACCAGGGCTaGAATCTTAAAAATGGAGCTTTGGTCAACGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GTTLVQTSTNQG*NLKNGALVNAT Trigger: AGTGGCGTTGACCAAAGCTCCATTTTTAAGATTCAAGCCCTGGTTTGTGGATGTCTGCACTAGAGTTGTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| 3UTR CAA 72 bp | TCAAGGGTAAAGATGCTGTTTTCAGCCCAGCTGCCCTaGACTGAGAAACAGAACAGAGAACCAACTCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SRVKMLFSAQLP*TEKQNREPTRK Trigger: TTTCCGAGTTGGTTCTCTGTTCTGTTTCTCAGTCAAGGGCAGCTGGGCTGAAAACAGCATCTTTACCCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR GCA 90 bp | ACTGAAAGCTCTGGTCCATCAGGTTCTAATACATTTGCACTGATAAGAAATCTCACTGTGGGGTGGAAATaGTCGGAGATGGGATTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TESSGPSGSNTFALIRNLTVGWK*SEMGLP Trigger: CGGCAATCCCATCTCCGAGCATTTCCACCCCACAGT...GAGATTTCTTATCAGTGCAAATGTATTAGAACCTGATGGACCAGAGCTTTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR CCA 90 bp | CTCCAAGATGATGCCAGAAATTTTCCAGTGTCTTACTTGTCCCCAAGCCTTGTCGAATCTAGGATGATCTaGAAAGAGTCCACGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LQDDARNFPVSYLSPSLVESRMI*KESTLN Trigger: GTTCAGCGTGGACTCTTTCCAGATCATCCTAGATTC...GACAAGGCTTGGGGACAAGTAAGACACTGGAAAATTTCTGGCATCATCTTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR CCA 90 bp | TTTCATTACCTTCCTTTTAACCCTGAAACAGCTCAGGTCTCCTCACAAAACCCACTTATTCACGCCCTCTaGCAGAAAGTTCAGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FHYLPFNPETAQVSSQNPLIHAL*QKVQKG Trigger: TCCCTTCTGAACTTTCTGCCAGAGGGCGTGAATAAG...TGGGTTTTGTGAGGAGACCTGAGCTGTTTCAGGGTTAAAAGGAAGGTAATGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS GCA 90 bp | GCCGGCTGCAGAGCCGTTCAGCCGGACGTCCTGCACGTTGATGCCTaGCTCCTCCAGCCGGCCTCGGACAGTCTGGACAATGTCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGCRAVQPDVLHVDA*LLQPASDSLDNVLQ Trigger: CTGAAGGACATTGTCCAGACTGTCCGAGGCCGGCTGGAGGAGGCAGGCATCAACGTGCAGGACGTCCGGCTGAACGGCTCTGCAGCCGGC 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS GCA 90 bp | TTGACCAAAACGTGGCCGGCTGCAGAGCCGTTCAGCCGGACGTCCTaGACGTTGATGCCTGCCTCCTCCAGCCGGCCTCGGACAGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LTKTWPAAEPFSRTS*TLMPASSSRPRTVW Trigger: CCAGACTGTCCGAGGCCGGCTGGAGGAGGCAGGCATCAACGTGCAGGACGTCCGGCTGAACGGCTCTGCAGCCGGCCACGTTTTGGTCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS TCA 90 bp | AAACGTGGCCGGCTGCAGAGCCGTTCAGCCGGACGTCCTGCACGTTaGTGCCTGCCTCCTCCAGCCGGCCTCGGACAGTCTGGACAATGT | + |
|
Preference number: 5 (lower is better) Translates to: KRGRLQSRSAGRPAR*CLPPPAGLGQSGQC Trigger: ACATTGTCCAGACTGTCCGAGGCCGGCTGGAGGAGGCAGGCATCAACGTGCAGGACGTCCGGCTGAACGGCTCTGCAGCCGGCCACGTTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR CAA 90 bp | CACCTGCCAGGCCTAGGTGCAGGCCATGCCTCAAGCCACAGGCAGTCCCAGGAACCCAAGCCGTTGTCTTaGACCAAAACGTGGCCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HLPGLGAGHASSHRQSQEPKPLS*TKTWPA Trigger: AGCCGGCCACGTTTTGGTCAAAGACAACGGCTTGGG...TTCCTGGGACTGCCTGTGGCTTGAGGCATGGCCTGCACCTAGGCCTGGCAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS TCA 90 bp | TGGATGGGCACGACCTCAGTCAGGACCTCGTGCAGCCGGCTAACCTaGTCCCAGTTGAGCACGCTGAAGGACTCAGAGTCCTTGGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: WMGTTSVRTSCSRLT*SQLSTLKDSESLVL Trigger: CAGTACCAAGGACTCTGAGTCCTTCAGCGTGCTCAACTGGGATCAGGTTAGCCGGCTGCACGAGGTCCTGACTGAGGTCGTGCCCATCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS GCA 90 bp | ATCTTTGCAACCCAAGCCGTTGTCTTTGACCAAAACGTGGCCGGCTaGAGAGCCGTTCAGCCGGACGTCCTGCACGTTGATGCCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: IFATQAVVFDQNVAG*RAVQPDVLHVDACL Trigger: GAGGCAGGCATCAACGTGCAGGACGTCCGGCTGAACGGCTCTGCAGCCGGCCACGTTTTGGTCAAAGACAACGGCTTGGGTTGCAAAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS CCA 90 bp | GCCTCGGACAGTCTGGACAATGTCCTTCAGGGTTATCTCCAAGGTTaGAAAGTTGCCTCGCCCGTGGATGGGCACGACCTCAGTCAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ASDSLDNVLQGYLQG*KVASPVDGHDLSQD Trigger: GTCCTGACTGAGGTCGTGCCCATCCACGGGCGAGGCAACTTTCCAACCTTGGAGATAACCCTGAAGGACATTGTCCAGACTGTCCGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS CCA 90 bp | AGATCCAGATCTTTGCAACCCAAGCCGTTGTCTTTGACCAAAACGTaGCCGGCTGCAGAGCCGTTCAGCCGGACGTCCTGCACGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: RSRSLQPKPLSLTKT*PAAEPFSRTSCTLM Trigger: CATCAACGTGCAGGACGTCCGGCTGAACGGCTCTGCAGCCGGCCACGTTTTGGTCAAAGACAACGGCTTGGGTTGCAAAGATCTGGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR CAA 90 bp | CAAACACCTACATCTAGAAAGAGGCTCTCCTACCTGAGAGCCCCTGCCCTAACCTCCAAGGTTGGAAAGTaGCCTCGCCCGTGGATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QTPTSRKRLSYLRAPALTSKVGK*PRPWMG Trigger: GCCCATCCACGGGCGAGGCAACTTTCCAACCTTGGA...GGTTAGGGCAGGGGCTCTCAGGTAGGAGAGCCTCTTTCTAGATGTAGGTGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS TCA 90 bp | CGTGAAAGATCAGATCCAGATCTTTGCAACCCAAGCCGTTGTCTTTaGCCAAAACGTGGCCGGCTGCAGAGCCGTTCAGCCGGACGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RERSDPDLCNPSRCL*PKRGRLQSRSAGRP Trigger: AGGACGTCCGGCTGAACGGCTCTGCAGCCGGCCACGTTTTGGTCAAAGACAACGGCTTGGGTTGCAAAGATCTGGATCTGATCTTTCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS GCA 90 bp | GTAGTAACAGGTGACGTTGGTGGCACTGGGGATGATGTTTTGTTCTaGCAGCACACGCAAGGCCAGGAGAGAGATGAGGTTCAGGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VVTGDVGGTGDDVLF*QHTQGQERDEVQGL Trigger: CAGACCCTGAACCTCATCTCTCTCCTGGCCTTGCGTGTGCTGGCAGAACAAAACATCATCCCCAGTGCCACCAACGTCACCTGTTACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS CCA 90 bp | GGGAGCACAGAACCACATCTCTCACCAGCTGAAATTCCGCCTCTGTaGGGAGAGCCACGTGAAAGATCAGATCCAGATCTTTGCAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: GSTEPHLSPAEIPPL*GEPRERSDPDLCNP Trigger: TGGGTTGCAAAGATCTGGATCTGATCTTTCACGTGGCTCTCCCCACAGAGGCGGAATTTCAGCTGGTGAGAGATGTGGTTCTGTGCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS-3UTR CAA 90 bp | CTATTGCATCTCCCTGAGTGGCACTCAACTATGGGTCCTTTTAGGGTTGGCTCAAAGGACTCAGAGTCCTaGGTACTGCTGCCCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLHLPEWHSTMGPFRVGSKDSES*VLLPSS Trigger: AGAGGAGGGCAGCAGTACCAAGGACTCTGAGTCCTT...TGAGCCAACCCTAAAAGGACCCATAGTTGAGTGCCACTCAGGGAGATGCAATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS-3UTR CAA 90 bp | GCTTGCTTTGGGCCAGCAATTAACACTGTTTTCCTTCCAAAGTGCAGAATAGAACGGACGTCCTGCACGTaGATGCCTGCCTCCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ACFGPAINTVFLPKCRIERTSCT*MPASSS Trigger: GCTGGAGGAGGCAGGCATCAACGTGCAGGACGTCCG...TTCTATTCTGCACTTTGGAAGGAAAACAGTGTTAATTGCTGGCCCAAAGCAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
||
| CDS-3UTR CAA 90 bp | AGAGTCGGAGCTGAGTTCCCCTTCGAAAGCCAAACACCTACATCTAGAAAGAGGTCCCGCACAAGGAGGTaGCTGTACTTAAGGAGACCC | + |
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Preference number: 5 (lower is better) Translates to: RVGAEFPFESQTPTSRKRSRTRR*LYLRRP Trigger: GGGTCTCCTTAAGTACAGCAACCTCCTTGTGCGGGA...CCTCTTTCTAGATGTAGGTGTTTGGCTTTCGAAGGGGAACTCAGCTCCGACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR CAA 90 bp | CACATTGAAATGACTGACCGAGGAGCAGCACCTTTCTACCACGGTAAGGCTGAATTCCTCCCGTTCTTGTaGGAGAGGGAAATCAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: HIEMTDRGAAPFYHGKAEFLPFL*EREIRL Trigger: GAGCCTGATTTCCCTCTCCAACAAGAACGGGAGGAA...TTCAGCCTTACCGTGGTAGAAAGGTGCTGCTCCTCGGTCAGTCATTTCAATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR CAA 90 bp | CTATTGCATCTCCCTGAGTGGCACTCAACTATGGGTCCTTTTAGGGTTGGCTCAACGTTCCTCCCGTTCTaGTTGGAGAGGGAAATCAGG | + |
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Preference number: 5 (lower is better) Translates to: LLHLPEWHSTMGPFRVGSTFLPF*LEREIR Trigger: CCTGATTTCCCTCTCCAACAAGAACGGGAGGAACGT...TGAGCCAACCCTAAAAGGACCCATAGTTGAGTGCCACTCAGGGAGATGCAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR CAA 90 bp | TGGGTCCTTTTAGGGTTGGCTCACGATAGTCTGTGGACCTATTCCAATGGGTACACTGGGGATGATGTTTaGTTCTGCCAGCACACGCAA | + |
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Preference number: 5 (lower is better) Translates to: WVLLGLAHDSLWTYSNGYTGDDV*FCQHTQ Trigger: TTGCGTGTGCTGGCAGAACAAAACATCATCCCCAGT...GTACCCATTGGAATAGGTCCACAGACTATCGTGAGCCAACCCTAAAAGGACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS CCA 90 bp | CGCAATGTAATAGTTGTTGAAGTTGCCATCACTGACGTAAGGAGCTaGCTGGTAGTAACAGGTGACGTTGGTGGCACTGGGGATGATGTT | + |
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Preference number: 5 (lower is better) Translates to: RNVIVVEVAITDVRS*LVVTGDVGGTGDDV Trigger: AACATCATCCCCAGTGCCACCAACGTCACCTGTTACTACCAGCCAGCTCCTTACGTCAGTGATGGCAACTTCAACAACTATTACATTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS CCA 90 bp | TTAGTTACAGGGCAGCCATGTAGGATAAGGCTGGCTGTAGGTAATTaGAGGGTGCGCAATGTAATAGTTGTTGAAGTTGCCATCACTGAC | + |
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Preference number: 5 (lower is better) Translates to: LVTGQPCRIRLAVGN*RVRNVIVVEVAITD Trigger: GTCAGTGATGGCAACTTCAACAACTATTACATTGCGCACCCTCCAATTACCTACAGCCAGCCTTATCCTACATGGCTGCCCTGTAACTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR CAA 90 bp | GTAGCTCGGATCTTTGGATTTTTACGGTCACTGAACAAAGTAGCAATTGAGATGGGGTTATCTCCAAGGTaGGAAAGTTGCCTCGCCCGT | + |
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Preference number: 5 (lower is better) Translates to: VARIFGFLRSLNKVAIEMGLSPR*ESCLAR Trigger: ACGGGCGAGGCAACTTTCCAACCTTGGAGATAACCC...CATCTCAATTGCTACTTTGTTCAGTGACCGTAAAAATCCAAAGATCCGAGCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS-3UTR CAA 90 bp | GTAGCTCGGATCTTTGGATTTTTACGGTCACTGAACAAAGTAGCAATTGAGATGTTGCAACCCAAGCCGTaGTCTTTGACCAAAACGTGG | + |
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Preference number: 5 (lower is better) Translates to: VARIFGFLRSLNKVAIEMLQPKP*SLTKTW Trigger: CCACGTTTTGGTCAAAGACAACGGCTTGGGTTGCAA...CATCTCAATTGCTACTTTGTTCAGTGACCGTAAAAATCCAAAGATCCGAGCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS GCA 72 bp | ACGTGGCCGGCTGCAGAGCCGTTCAGCCGGACGTCCTaGACGTTGATGCCTGCCTCCTCCAGCCGGCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: TWPAAEPFSRTS*TLMPASSSRPR Trigger: CCGAGGCCGGCTGGAGGAGGCAGGCATCAACGTGCAGGACGTCCGGCTGAACGGCTCTGCAGCCGGCCACGT 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS CAA 90 bp | AAAACGTGGCCGGCTGCAGAGCCGTTCAGCCGGACGTCCTGCACGTaGATGCCTGCCTCCTCCAGCCGGCCTCGGACAGTCTGGACAATG | + |
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Preference number: 6 (lower is better) Translates to: KTWPAAEPFSRTSCT*MPASSSRPRTVWTM Trigger: CATTGTCCAGACTGTCCGAGGCCGGCTGGAGGAGGCAGGCATCAACGTGCAGGACGTCCGGCTGAACGGCTCTGCAGCCGGCCACGTTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS GCA 72 bp | AGAGCCGTTCAGCCGGACGTCCTGCACGTTGATGCCTaGCTCCTCCAGCCGGCCTCGGACAGTCTGGACAAT | + |
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Preference number: 6 (lower is better) Translates to: RAVQPDVLHVDA*LLQPASDSLDN Trigger: ATTGTCCAGACTGTCCGAGGCCGGCTGGAGGAGGCAGGCATCAACGTGCAGGACGTCCGGCTGAACGGCTCT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS CCA 72 bp | TTATCTCCAAGGTTGGAAAGTTGCCTCGCCCGTGGATaGGCACGACCTCAGTCAGGACCTCGTGCAGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: LSPRLESCLARG*ARPQSGPRAAG Trigger: GCCGGCTGCACGAGGTCCTGACTGAGGTCGTGCCCATCCACGGGCGAGGCAACTTTCCAACCTTGGAGATAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS TCA 72 bp | ACGACCTCAGTCAGGACCTCGTGCAGCCGGCTAACCTaGTCCCAGTTGAGCACGCTGAAGGACTCAGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: TTSVRTSCSRLT*SQLSTLKDSES Trigger: GGACTCTGAGTCCTTCAGCGTGCTCAACTGGGATCAGGTTAGCCGGCTGCACGAGGTCCTGACTGAGGTCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS GCA 72 bp | ACCCAAGCCGTTGTCTTTGACCAAAACGTGGCCGGCTaGAGAGCCGTTCAGCCGGACGTCCTGCACGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: TQAVVFDQNVAG*RAVQPDVLHVD Trigger: ATCAACGTGCAGGACGTCCGGCTGAACGGCTCTGCAGCCGGCCACGTTTTGGTCAAAGACAACGGCTTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS CCA 72 bp | TCTTTGCAACCCAAGCCGTTGTCTTTGACCAAAACGTaGCCGGCTGCAGAGCCGTTCAGCCGGACGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SLQPKPLSLTKT*PAAEPFSRTSC Trigger: GCAGGACGTCCGGCTGAACGGCTCTGCAGCCGGCCACGTTTTGGTCAAAGACAACGGCTTGGGTTGCAAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS CAA 90 bp | ACAGTCTGGACAATGTCCTTCAGGGTTATCTCCAAGGTTGGAAAGTaGCCTCGCCCGTGGATGGGCACGACCTCAGTCAGGACCTCGTGC | + |
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Preference number: 6 (lower is better) Translates to: TVWTMSFRVISKVGK*PRPWMGTTSVRTSC Trigger: GCACGAGGTCCTGACTGAGGTCGTGCCCATCCACGGGCGAGGCAACTTTCCAACCTTGGAGATAACCCTGAAGGACATTGTCCAGACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS TCA 72 bp | TCAGATCCAGATCTTTGCAACCCAAGCCGTTGTCTTTaGCCAAAACGTGGCCGGCTGCAGAGCCGTTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SDPDLCNPSRCL*PKRGRLQSRSA Trigger: GGCTGAACGGCTCTGCAGCCGGCCACGTTTTGGTCAAAGACAACGGCTTGGGTTGCAAAGATCTGGATCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS GCA 72 bp | GGTGACGTTGGTGGCACTGGGGATGATGTTTTGTTCTaGCAGCACACGCAAGGCCAGGAGAGAGATGAGGTT | + |
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Preference number: 6 (lower is better) Translates to: GDVGGTGDDVLF*QHTQGQERDEV Trigger: AACCTCATCTCTCTCCTGGCCTTGCGTGTGCTGGCAGAACAAAACATCATCCCCAGTGCCACCAACGTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS CAA 90 bp | TGGCTGGTAGTAACAGGTGACGTTGGTGGCACTGGGGATGATGTTTaGTTCTGCCAGCACACGCAAGGCCAGGAGAGAGATGAGGTTCAG | + |
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Preference number: 6 (lower is better) Translates to: WLVVTGDVGGTGDDV*FCQHTQGQERDEVQ Trigger: CTGAACCTCATCTCTCTCCTGGCCTTGCGTGTGCTGGCAGAACAAAACATCATCCCCAGTGCCACCAACGTCACCTGTTACTACCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS TCA 72 bp | ACACGGTGCTCTCGTTCACAACCCTGCGGAGAATCATaGGGTAGTCGTACTTGCTTCTCTCCTCGTCCGAGA | + |
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Preference number: 6 (lower is better) Translates to: TRCSRSQPCGES*GSRTCFSPRPR Trigger: TCTCGGACGAGGAGAGAAGCAAGTACGACTACCTCATGATTCTCCGCAGGGTTGTGAACGAGAGCACCGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS CAA 72 bp | ATCAGATCCAGATCTTTGCAACCCAAGCCGTTGTCTTaGACCAAAACGTGGCCGGCTGCAGAGCCGTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: IRSRSLQPKPLS*TKTWPAAEPFS Trigger: GCTGAACGGCTCTGCAGCCGGCCACGTTTTGGTCAAAGACAACGGCTTGGGTTGCAAAGATCTGGATCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS CCA 72 bp | GAACCACATCTCTCACCAGCTGAAATTCCGCCTCTGTaGGGAGAGCCACGTGAAAGATCAGATCCAGATCTT | + |
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Preference number: 6 (lower is better) Translates to: EPHLSPAEIPPL*GEPRERSDPDL Trigger: AAGATCTGGATCTGATCTTTCACGTGGCTCTCCCCACAGAGGCGGAATTTCAGCTGGTGAGAGATGTGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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| CDS CCA 72 bp | GGGCAGCCATGTAGGATAAGGCTGGCTGTAGGTAATTaGAGGGTGCGCAATGTAATAGTTGTTGAAGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: GQPCRIRLAVGN*RVRNVIVVEVA Trigger: GGCAACTTCAACAACTATTACATTGCGCACCCTCCAATTACCTACAGCCAGCCTTATCCTACATGGCTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061455.9 |
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