RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TENM3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031561

Ensembl transcript IDs: ENSMUST00000033965.14, ENSMUST00000110343.3, ENSMUST00000110345.8, ENSMUST00000110346.9, ENSMUST00000190840.8, ENSMUST00000211812.2, ENSMUST00000211976.2

Found 732 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTTGCTACAGGAGAATCTaGACAGGGGTGGCCCGGGGG +
Preference number: 2 (lower is better)
Translates to: TSLVPVSFYKAARESSWVCYRRI*TGVARG
Trigger: CCCCCGGGCCACCCCTGTGCAGATTCTCCTGTAGCA...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
3UTR CAA 90 bp CTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTaGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGG +
Preference number: 2 (lower is better)
Translates to: LRCVCLQSSVILEGS*ESPVWIVLQENLHR
Trigger: CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
3UTR-3UTR GCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTGTTTCTGGTTTGTGTTaGGTGTGTATCTGCGATGTG +
Preference number: 2 (lower is better)
Translates to: TSLVPVSFYKAARESSWVVSGLC*VCICDV
Trigger: CACATCGCAGATACACACGCAACACAAACCAGAAAC...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
3UTR-3UTR CCA 90 bp GTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAATTGGAGAGTCCGGTTTaGATTGTGCTACAGGAGAAT +
Preference number: 2 (lower is better)
Translates to: VLRVYLRCVCLQSSVILELESPV*IVLQEN
Trigger: ATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA...TTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
3UTR-3UTR CCA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAGTTGTCTTTGTTTCTaGTTTGTGTTGCGTGTGTAT +
Preference number: 2 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYSCLCF*FVLRVY
Trigger: ATACACACGCAACACAAACCAGAAACAAAGACAACT...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
3UTR-3UTR GCA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAATGTTGCGTGTGTATCTaGGATGTGTCTGTCTGCAGA +
Preference number: 2 (lower is better)
Translates to: FSFLILPVQLSAAICVCKCCVCI*DVSVCR
Trigger: TCTGCAGACAGACACATCGCAGATACACACGCAACA...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
3UTR-3UTR CCA 90 bp TCAGGGTTTCCTTTGCTTATCAGTGACAAGGATTCTATTCGTCAGTTTTTCCCTTTTTGGAAGGCTCTTTaGAGAGTCCGGTTTGGATTG +
Preference number: 2 (lower is better)
Translates to: SGFPLLISDKDSIRQFFPFWKAL*RVRFGL
Trigger: CAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAA...AGGGAAAAACTGACGAATAGAATCCTTGTCACTGATAAGCAAAGGAAACCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
3UTR GCA 72 bp TTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTaGTACAGGAGAATCTGCACAGGGGTGGCCCGGGGG +
Preference number: 3 (lower is better)
Translates to: FWKALWRVRFGL*YRRICTGVARG
Trigger: CCCCCGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
3UTR GCA 72 bp CCATTATTAAATCCCCGCCGAAGCAGACGTCCCTTGTaGCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCA +
Preference number: 3 (lower is better)
Translates to: PLLNPRRSRRPL*QCPFTKQHGKA
Trigger: TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATTTAATAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
3UTR CCA 72 bp AGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTaGATTGTGCTACAGGAGAATCTGCACAGGGGTGGC +
Preference number: 3 (lower is better)
Translates to: SVILEGSLESPV*IVLQENLHRGG
Trigger: GCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
3UTR-3UTR CAA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTGTCTTTGTTTCTGGTTaGTGTTGCGTGTGTATCTGC +
Preference number: 3 (lower is better)
Translates to: TSLVPVSFYKAARESSWVVFVSG*CCVCIC
Trigger: GCAGATACACACGCAACACAAACCAGAAACAAAGAC...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
3UTR GCA 72 bp GGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTaGAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGA +
Preference number: 3 (lower is better)
Translates to: GLCCVCICDVSV*RAVSFWKALWR
Trigger: TCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
3UTR CCA 72 bp TCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTaGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATC +
Preference number: 3 (lower is better)
Translates to: SVCRAVSFWKAL*RVRFGLCYRRI
Trigger: GATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
3UTR-3UTR CAA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAAATTTTGGAAGGCTCTTaGGAGAGTCCGGTTTGGATT +
Preference number: 3 (lower is better)
Translates to: FSFLILPVQLSAAICVCKILEGS*ESPVWI
Trigger: AATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAAT...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp ATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGCCGTGTCTGTCAGGGTaGGGGCGGAGTTGGACCGGC +
Preference number: 4 (lower is better)
Translates to: IPAEADVPCASVLLQSSTPCLSG*GRSWTG
Trigger: GCCGGTCCAACTCCGCCCTCACCCTGACAGACACGG...CGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR TCA 90 bp ATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAGTTGGACCGGCTTaGCAGGCAGGAACTGCGGCC +
Preference number: 4 (lower is better)
Translates to: IPAEADVPCASVLLQSSTGVGPA*QAGTAA
Trigger: GGCCGCAGTTCCTGCCTGTCAAGCCGGTCCAACTCC...CGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR TCA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGGGAGTTGGACCGGCTTaGCAGGCAGGAACTGCGGCC +
Preference number: 4 (lower is better)
Translates to: LESPVWIVLQENLHRGGPGVGPA*QAGTAA
Trigger: GGCCGCAGTTCCTGCCTGTCAAGCCGGTCCAACTCC...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGCAGCTTCGTGCAGGCTaGCAGATCTCGCCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: LESPVWIVLQENLHRGGPQLRAG*QISPAA
Trigger: GGCGGCAGGCGAGATCTGTCAGCCTGCACGAAGCTG...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp ATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGACTCCAGGGTGGTCTaGACCGCGTGCTTCCCCACC +
Preference number: 4 (lower is better)
Translates to: IPAEADVPCASVLLQSSTDSRVV*TACFPT
Trigger: GGTGGGGAAGCACGCGGTTCAGACCACCCTGGAGTC...CGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR GCA 90 bp ATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGCTGTGGGATTCGCCGTaGCAGCCAGAACGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: IPAEADVPCASVLLQSSTLWDSP*QPERGA
Trigger: AGCCCCACGTTCTGGCTGGCACGGCGAATCCCACAG...CGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR GCA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGCGAACCTGCGAGTCCTaGCGTTCACCACCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LESPVWIVLQENLHRGGPRTCES*RSPPWW
Trigger: CCACCACGGTGGTGAACGGCAGGACTCGCAGGTTCG...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGGACCTGACAGTGCATaGGCCGCCCGGCAGCGATGC +
Preference number: 4 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKAGPDSA*AARQRC
Trigger: GCATCGCTGCCGGGCGGCCCATGCACTGTCAGGTCC...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGCCGTGTCTGTCAGGGTaGGGGCGGAGTTGGACCGGC +
Preference number: 4 (lower is better)
Translates to: EGSLESPVWIVLQENLHRPCLSG*GRSWTG
Trigger: GCCGGTCCAACTCCGCCCTCACCCTGACAGACACGG...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGCCTCGTTGGCGATGTTaGGCACGTTGGTCTGCACGC +
Preference number: 4 (lower is better)
Translates to: LESPVWIVLQENLHRGGPPRWRC*ARWSAR
Trigger: GCGTGCAGACCAACGTGCTCAACATCGCCAACGAGG...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGCACCGCCGCCACCTTaGTGCAGTCCTCGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKAAPPPP*CSPRWR
Trigger: TCGCCAACGAGGACTGCATCAAGGTGGCGGCGGTGC...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGACCGGATGGTCTGCATaGTGTGGCGAGCCACACTGG +
Preference number: 4 (lower is better)
Translates to: LESPVWIVLQENLHRGGPTGWSA*CGEPHW
Trigger: CCAGTGTGGCTCGCCACACCATGCAGACCATCCGGT...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTCTGCACGCGGCCTTaGCTCACGGCCAGCATGACG +
Preference number: 4 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKAVCTRP*LTASMT
Trigger: CGTCATGCTGGCCGTGAGCCAAGGCCGCGTGCAGAC...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGCAGCTTCGTGCAGGCTaGCAGATCTCGCCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: GRLFGESGLDCATGESAQQLRAG*QISPAA
Trigger: GGCGGCAGGCGAGATCTGTCAGCCTGCACGAAGCTG...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGCCACGACCCCCGCACTaGGGGTCAATGCACTGGGTC +
Preference number: 4 (lower is better)
Translates to: GRLFGESGLDCATGESAQPRPPH*GSMHWV
Trigger: GACCCAGTGCATTGACCCGCAGTGCGGGGGTCGTGG...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCTCGTCAGCCGCAGTGTaGCCAGGTCGCTCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESSSAAV*PGRSRV
Trigger: CACCCGAGAGCGACCTGGGCACACTGCGGCTGACGA...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTCCAGCGCTCAGCAGCTaGCGTTTCTCACCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGPALSS*RFSPSV
Trigger: GACGGAGGGTGAGAAACGGCAGCTGCTGAGCGCTGG...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTGGACGGACTCGGGTGTaGTTTGCAGCTCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVGRTRV*FAARRA
Trigger: TGCCCGCCGAGCTGCAAACCACACCCGAGTCCGTCC...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCGGACGGACTCGGGTGTaGTTTGCAGCTCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESGRTRV*FAARRA
Trigger: TGCCCGCCGAGCTGCAAACCACACCCGAGTCCGTCC...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGTGCCGTACTGAACAGTaGCGTCGTCCCTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: LESPVWIVLQENLHRGGPCRTEQ*RRPCPC
Trigger: ACAGGGACAGGGACGACGCCACTGTTCAGTACGGCA...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCCCTCTCCACCCTGGCTaGCAAACGCAGTGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESPLHPG*QTQCQP
Trigger: CGGCTGGCACTGCGTTTGCCAGCCAGGGTGGAGAGG...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGGGACCTGACAGTGCATaGGCCGCCCGGCAGCGATGC +
Preference number: 4 (lower is better)
Translates to: VACVSAMCLSAEQCHFGRGPDSA*AARQRC
Trigger: GCATCGCTGCCGGGCGGCCCATGCACTGTCAGGTCC...CCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGATGGTCTGCATGGTGTaGCGAGCCACACTGGGCATG +
Preference number: 4 (lower is better)
Translates to: LESPVWIVLQENLHRGGPMVCMV*RATLGM
Trigger: CATGCCCAGTGTGGCTCGCCACACCATGCAGACCAT...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATGCCCTTCCAGCCACTaGAGCACAGGCAGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: SLVPVSFYKAARESSWVLCPSSH*STGSGP
Trigger: AGGGCCGCTGCCTGTGCTTCAGTGGCTGGAAGGGCA...TAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp AATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACAAGCGCAAGAGCCCATaGTGCAAATCCCACGACCCC +
Preference number: 4 (lower is better)
Translates to: NPRRSRRPLCQCPFTKQHKRKSP*CKSHDP
Trigger: GGGGTCGTGGGATTTGCATCATGGGCTCTTGCGCTT...GTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR TCA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGCACACAGTGTGGTACTaGGTGAGGAATGGGGAACGC +
Preference number: 4 (lower is better)
Translates to: LESPVWIVLQENLHRGGPHTVWY*VRNGER
Trigger: GCGTTCCCCATTCCTCACTCAGTACCACACTGTGTG...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTGACTCCAGGGTGGTCTaGACCGCGTGCTTCCCCACC +
Preference number: 4 (lower is better)
Translates to: RVYLRCVCLQSSVILEGSDSRVV*TACFPT
Trigger: GGTGGGGAAGCACGCGGTTCAGACCACCCTGGAGTC...AGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp GTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAACCACACTGGGCATGGTaGTGGCGGACAGGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: VLRVYLRCVCLQSSVILEPHWAW*WRTGGP
Trigger: GGGACCGCCTGTCCGCCATCACCATGCCCAGTGTGG...TTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTTGCTGCGCCGGGTGCTaGTTGTGGGATGGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVCCAGC*LWDGGK
Trigger: TTTGCCGCCATCCCACAAGCAGCACCCGGCGCAGCA...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGACTCGGGTGTGGTTTaGAGCTCGGCGGGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKADSGVV*SSAGKA
Trigger: TGCTTTGCCCGCCGAGCTGCAAACCACACCCGAGTC...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCGCACTTGCCGTCCTTaGACGTCCCGTGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVRTCRP*TSRAQH
Trigger: GTGCTGAGCACGGGACGTGCAAGGACGGCAAGTGCG...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGCGCACTTGCCGTCCTTaGACGTCCCGTGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: GRLFGESGLDCATGESAQRTCRP*TSRAQH
Trigger: GTGCTGAGCACGGGACGTGCAAGGACGGCAAGTGCG...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTGTGGGATTCGCCGTaGCAGCCAGAACGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVLWDSP*QPERGA
Trigger: AGCCCCACGTTCTGGCTGGCACGGCGAATCCCACAG...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGTGGTCCCTCTCTGGATaGTGGCAATTTGACCGGTGG +
Preference number: 4 (lower is better)
Translates to: LESPVWIVLQENLHRGGPWSLSG*WQFDRW
Trigger: CCACCGGTCAAATTGCCAGCATCCAGAGAGGGACCA...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp AATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGCCTTGGCTTGCCTTaGCACTTGCTGCTGAACTCC +
Preference number: 4 (lower is better)
Translates to: NPRRSRRPLCQCPFTKQHGLGLP*HLLLNS
Trigger: GGAGTTCAGCAGCAAGTGGCAAGGCAAGCCAAGGCC...GTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR GCA 90 bp CGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTCGTCAGCCGCAGTGTaGCCAGGTCGCTCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: RVYLRCVCLQSSVILEGSSSAAV*PGRSRV
Trigger: CACCCGAGAGCGACCTGGGCACACTGCGGCTGACGA...AGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCGAACCTGCGAGTCCTaGCGTTCACCACCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVRTCES*RSPPWW
Trigger: CCACCACGGTGGTGAACGGCAGGACTCGCAGGTTCG...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGCCACGTCGGCGAACCTaGGAGTCCTGCCGTTCACCA +
Preference number: 4 (lower is better)
Translates to: GRLFGESGLDCATGESAQPRRRT*ESCRSP
Trigger: TGGTGAACGGCAGGACTCGCAGGTTCGCCGACGTGG...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTGCCAGGGCACCGAACTaGATCTCCACGTCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVARAPN*ISTSAN
Trigger: GTTCGCCGACGTGGAGATGCAGTTCGGTGCCCTGGC...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGCCAGGGCACCGAACTaGATCTCCACGTCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: EGSLESPVWIVLQENLHRARAPN*ISTSAN
Trigger: GTTCGCCGACGTGGAGATGCAGTTCGGTGCCCTGGC...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCGTACAGAGTGCCATCTaGCGAGGCGGCCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESVQSAI*RGGQGG
Trigger: TCCTCCCTGGCCGCCTCGCCAGATGGCACTCTGTAC...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTGTACAGAGTGCCATCTaGCGAGGCGGCCAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVVQSAI*RGGQGG
Trigger: TCCTCCCTGGCCGCCTCGCCAGATGGCACTCTGTAC...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGTTCCTTTGGGACTCATaGGCGTTGCTTCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: LESPVWIVLQENLHRGGPFLWDS*ALLPQP
Trigger: AGGCTGTGGAAGCAACGCTCATGAGTCCCAAAGGAA...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCCCTCGTTGGCGATGTTaGGCACGTTGGTCTGCACGC +
Preference number: 4 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESPRWRC*ARWSAR
Trigger: GCGTGCAGACCAACGTGCTCAACATCGCCAACGAGG...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTACCACCGTGGTGGACTaGGACACGGTCACGTTGATC +
Preference number: 4 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGTTVVD*DTVTLI
Trigger: GATCAACGTGACCGTGTCTCAGTCCACCACGGTGGT...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTGACTCGGGTGTGGTTTaGAGCTCGGCGGGCAAAGCA +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVDSGVV*SSAGKA
Trigger: TGCTTTGCCCGCCGAGCTGCAAACCACACCCGAGTC...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCCCTACAGCACACAGTaGGGTGCACCTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVPYSTQ*GAPPAA
Trigger: TGCAGCTGGAGGTGCACCGCACTGTGTGCTGTAGGG...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGTTGTCCATGTCCCCGTaGAGGTTTGTAACCACCCCA +
Preference number: 4 (lower is better)
Translates to: LESPVWIVLQENLHRGGPLSMSP*RFVTTP
Trigger: TGGGGTGGTTACAAACCTGCACGGGGACATGGACAA...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTATGGACCGGATGGTCTaGATGGTGTGGCGAGCCACA +
Preference number: 4 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGMDRMV*MVWRAT
Trigger: TGTGGCTCGCCACACCATGCAGACCATCCGGTCCAT...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATTTGCGTCGGCTCACCTaGACCTCGGCCATCTTCCCC +
Preference number: 4 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYLRRLT*TSAIFP
Trigger: GGGGAAGATGGCCGAGGTGCAGGTGAGCCGACGCAA...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTGCGTCGGCTCACCTaGACCTCGGCCATCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHLRRLT*TSAIFP
Trigger: GGGGAAGATGGCCGAGGTGCAGGTGAGCCGACGCAA...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTCCACGTCGGCGAACCTaGGAGTCCTGCCGTTCACCA +
Preference number: 4 (lower is better)
Translates to: RVYLRCVCLQSSVILEGSPRRRT*ESCRSP
Trigger: TGGTGAACGGCAGGACTCGCAGGTTCGCCGACGTGG...AGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTAGCGCCTGCTCCAGAATaGGCGCCTTCTCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: SLVPVSFYKAARESSWVLAPAPE*APSPRP
Trigger: TGGACGAGGAGAAGGCGCGCATTCTGGAGCAGGCGC...TAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAACGTAGCCCTGCACCTTaGCAGCGCTCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VLRVYLRCVCLQSSVILERSPAP*QRSAAA
Trigger: GGCAGCTGCTGAGCGCTGGCAAGGTGCAGGGCTACG...TTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTGCCGTACTGAACAGTaGCGTCGTCCCTGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGCRTEQ*RRPCPC
Trigger: ACAGGGACAGGGACGACGCCACTGTTCAGTACGGCA...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTCCACCTTTTCGCTCGTaGTCCCTCTCTGGATGCTGG +
Preference number: 4 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGPPFRS*SLSGCW
Trigger: CCAGCATCCAGAGAGGGACCACGAGCGAAAAGGTGG...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGACCGGATGGTCTGCATaGTGTGGCGAGCCACACTGG +
Preference number: 4 (lower is better)
Translates to: GRLFGESGLDCATGESAQTGWSA*CGEPHW
Trigger: CCAGTGTGGCTCGCCACACCATGCAGACCATCCGGT...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp AATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACCATCTGACCCTGCACTaGTGGAGTAACCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: NPRRSRRPLCQCPFTKQHHLTLH*WSNLCE
Trigger: CTCACAGAGGTTACTCCATCAGTGCAGGGTCAGATG...GTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR TCA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTTGCCCTTCCAGCCACTaGAGCACAGGCAGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: HFGRLFGESGLDCATGESCPSSH*STGSGP
Trigger: AGGGCCGCTGCCTGTGCTTCAGTGGCTGGAAGGGCA...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGTAAGTCCCGTGGCCTaGGCACTGGTCTGCACACAT +
Preference number: 4 (lower is better)
Translates to: GRLFGESGLDCATGESAQVSPVA*ALVCTH
Trigger: ATGTGTGCAGACCAGTGCTCAGGCCACGGGACTTAC...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGCAGCGATGCGGACCTaGCGGTTTTCAGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKAAAMRT*RFSVIC
Trigger: ACAGATCACTGAAAACCGTCAGGTCCGCATCGCTGC...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCACCACACTGGGCATGGTaGTGGCGGACAGGCGGTCCC +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPPHWAW*WRTGGP
Trigger: GGGACCGCCTGTCCGCCATCACCATGCCCAGTGTGG...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGCCATTCCATCCTCGCTaGAGCGGAAAATCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LESPVWIVLQENLHRGGPPFHPR*SGKSVC
Trigger: ACAGACAGATTTTCCGCTTCAGCGAGGATGGAATGG...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCGCACCGCCGCCACCTTaGTGCAGTCCTCGTTGGCGA +
Preference number: 4 (lower is better)
Translates to: SFWKALWRVRFGLCYRRIAPPPP*CSPRWR
Trigger: TCGCCAACGAGGACTGCATCAAGGTGGCGGCGGTGC...GATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp GTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGGAGACACGGTCACGTTaGTCCCGTTCTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VACVSAMCLSAEQCHFGRETRSR*SRSPGP
Trigger: AGGCCCTGGAGAACGGGATCAACGTGACCGTGTCTC...CCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp AATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACCTCAGGGGACATCACTaGTTCGTTTTCCGTATCCGC +
Preference number: 4 (lower is better)
Translates to: NPRRSRRPLCQCPFTKQHLRGHH*FVFRIR
Trigger: GCGGATACGGAAAACGAAGCAGTGATGTCCCCTGAG...GTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR GCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTTCCGACCTGTTCTCGTaGTCCGTGTCTGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVSDLFS*SVSVRV
Trigger: CACCCTGACAGACACGGAGCACGAGAACAGGTCGGA...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGATGGCGGCAAAGGCTaGAGGGTGGGTTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: HFGRLFGESGLDCATGESDGGKG*RVGCPG
Trigger: CCCAGGGCAACCCACCCTGCAGCCTTTGCCGCCATC...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATCCCTACAGCACACAGTaGGGTGCACCTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHPYSTQ*GAPPAA
Trigger: TGCAGCTGGAGGTGCACCGCACTGTGTGCTGTAGGG...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCACACCCCAGCCTGGATTaGAGTGACATTCCCCATGGA +
Preference number: 4 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKAHPSLD*SDIPHG
Trigger: TCCATGGGGAATGTCACTGCAATCCAGGCTGGGGTG...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCCGTTCCATCCTTGGCTaGACTCGCACTTGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESRSILG*TRTCRP
Trigger: AGGACGGCAAGTGCGAGTGCAGCCAAGGATGGAACG...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCGTGTGCATCTCCCATTaGTGTTGCACAAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESVCISH*CCTSRG
Trigger: GCCCCGGCTTGTGCAACAGCAATGGGAGATGCACAC...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGCTGGCAAACGCAGTaGCAGCCGTTTTGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: GRLFGESGLDCATGESAQGWQTQ*QPFWSS
Trigger: ACTGGACCAAAACGGCTGGCACTGCGTTTGCCAGCC...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTCACTCCACCAGATTCTaGCCGTTCTCACCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGHSTRF*PFSPGR
Trigger: TCTTCCCGGTGAGAACGGGCAGAATCTGGTGGAGTG...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGCCTTGGCTTGCCTTaGCACTTGCTGCTGAACTCC +
Preference number: 4 (lower is better)
Translates to: GRLFGESGLDCATGESAQGLGLP*HLLLNS
Trigger: GGAGTTCAGCAGCAAGTGGCAAGGCAAGCCAAGGCC...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTGAGCACGTTGGTCTaGACGCGGCCTTGGCTCACG +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHLSTLV*TRPWLT
Trigger: CGTGAGCCAAGGCCGCGTGCAGACCAACGTGCTCAA...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAACCAGCGCTCAGCAGCTaGCGTTTCTCACCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: VLRVYLRCVCLQSSVILEPALSS*RFSPSV
Trigger: GACGGAGGGTGAGAAACGGCAGCTGCTGAGCGCTGG...TTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTCGTAGCCCTGCACCTTaGCAGCGCTCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: HFGRLFGESGLDCATGESRSPAP*QRSAAA
Trigger: GGCAGCTGCTGAGCGCTGGCAAGGTGCAGGGCTACG...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCGCAAAGGCTGCAGGGTaGGTTGCCCTGGGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESAKAAG*VALGCL
Trigger: CAAACAACCCAGGGCAACCCACCCTGCAGCCTTTGC...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATGGCGGGGCCGGACTCTaGTTCCTTCTATTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYGGAGL*FLLLVR
Trigger: CCTGACCAATAGAAGGAACCAGAGTCCGGCCCCGCC...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTAGCTGCCACCCCAGCCTaGATTGCAGTGACATTCCCC +
Preference number: 4 (lower is better)
Translates to: SLVPVSFYKAARESSWVLAATPA*IAVTFP
Trigger: GGGGAATGTCACTGCAATCCAGGCTGGGGTGGCAGC...TAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATGGGGCCAGTCCAATTTaGGTCGCAAGTGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHGASPI*VASAGA
Trigger: GGCTCCTGCACTTGCGACCCAAATTGGACTGGCCCC...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTACTCCATCCCCACACCTaGCCTCGTCAAAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: SLVPVSFYKAARESSWVLLHPHT*PRQREG
Trigger: GCCTTCCCTTTGACGAGGCCAGGTGTGGGGATGGAG...TAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGTGGCTGACTCCAGGGTaGTCTGAACCGCGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: VACVSAMCLSAEQCHFGRWLTPG*SEPRAS
Trigger: GGAAGCACGCGGTTCAGACCACCCTGGAGTCAGCCA...CCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTGGCTGACTCCAGGGTaGTCTGAACCGCGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHWLTPG*SEPRAS
Trigger: GGAAGCACGCGGTTCAGACCACCCTGGAGTCAGCCA...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGCCACCTTTTCGCTCGTaGTCCCTCTCTGGATGCTGG +
Preference number: 4 (lower is better)
Translates to: GRLFGESGLDCATGESAQPPFRS*SLSGCW
Trigger: CCAGCATCCAGAGAGGGACCACGAGCGAAAAGGTGG...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTGCGGTAGTAGCCAATaGACCGGATGGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGCGSSQ*TGWSAW
Trigger: CCATGCAGACCATCCGGTCCATTGGCTACTACCGCA...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
3UTR CAA 72 bp TCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATaGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SFWKALWRVRFG*CYRRICTGVAR
Trigger: CCGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp AAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCATTCATGGGTTGCCCTTCCAGCCACTaGAGCACAGGCAGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: KNLTSFAVDGGQGEAFMGCPSSH*STGSGP
Trigger: AGGGCCGCTGCCTGTGCTTCAGTGGCTGGAAGGGCA...ACCCATGAATGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR TCA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGCCTCAGGGGAAGACCTaGAGAAGGTGGATAACGGTG +
Preference number: 4 (lower is better)
Translates to: GRLFGESGLDCATGESAQPQGKT*RRWITV
Trigger: CACCGTTATCCACCTTCTTCAGGTCTTCCCCTGAGG...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGACCAGTTCCAGGCCCTaGGCGGTCATGCTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: EGSLESPVWIVLQENLHRTSSRP*AVMLFR
Trigger: TCTGAAAAGCATGACCGCTCAGGGCCTGGAACTGGT...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGACCAGTTCCAGGCCCTaGGCGGTCATGCTTTTCAGA +
Preference number: 4 (lower is better)
Translates to: GRLFGESGLDCATGESAQTSSRP*AVMLFR
Trigger: TCTGAAAAGCATGACCGCTCAGGGCCTGGAACTGGT...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGTCTGCCTTCTATACTTaGATAAGACCCTCCGACTCG +
Preference number: 4 (lower is better)
Translates to: LESPVWIVLQENLHRGGPSAFYT*IRPSDS
Trigger: CGAGTCGGAGGGTCTTATTCAAGTATAGAAGGCAGA...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATCTTGCCACTTGCTGCTaGACTCCAAAGATGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHLATCC*TPKMGG
Trigger: GCCGCCCATCTTTGGAGTTCAGCAGCAAGTGGCAAG...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTCCGACCTGTTCTCGTaGTCCGTGTCTGTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RVYLRCVCLQSSVILEGSSDLFS*SVSVRV
Trigger: CACCCTGACAGACACGGAGCACGAGAACAGGTCGGA...AGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCTGCGCCGGGTGCTaGTTGTGGGATGGCGGCAAA +
Preference number: 4 (lower is better)
Translates to: SFWKALWRVRFGLCYRRICCAGC*LWDGGK
Trigger: TTTGCCGCCATCCCACAAGCAGCACCCGGCGCAGCA...GATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTCCAGTGGTACATTACTaGCAAGGACCCAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGPVVHY*QGPSCP
Trigger: AGGACAGCTGGGTCCTTGGCAGTAATGTACCACTGG...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp ATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGTCCGTCTGCTGTAAGTaGCAGTTGAGGCCAAATAGA +
Preference number: 4 (lower is better)
Translates to: IPAEADVPCASVLLQSSTSVCCK*QLRPNR
Trigger: TCTATTTGGCCTCAACTGGCACTTACAGCAGACGGA...CGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR GCA 90 bp TCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCCTGACAGATCTCGCCTaGCGCCCGGCTCTTTCGGAC +
Preference number: 4 (lower is better)
Translates to: SFWKALWRVRFGLCYRRILTDLA*RPALSD
Trigger: GTCCGAAAGAGCCGGGCGGCAGGCGAGATCTGTCAG...GATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTCTGACAGATCTCGCCTaGCGCCCGGCTCTTTCGGAC +
Preference number: 4 (lower is better)
Translates to: HFGRLFGESGLDCATGESLTDLA*RPALSD
Trigger: GTCCGAAAGAGCCGGGCGGCAGGCGAGATCTGTCAG...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCGGCCCTTGGAGTATTaGCCGTTGCCACTACAGAGC +
Preference number: 4 (lower is better)
Translates to: VACVSAMCLSAEQCHFGRRPLEY*PLPLQS
Trigger: GCTCTGTAGTGGCAACGGGCAATACTCCAAGGGCCG...CCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCACCACGACCCCCGCACTaGGGGTCAATGCACTGGGTC +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPPRPPH*GSMHWV
Trigger: GACCCAGTGCATTGACCCGCAGTGCGGGGGTCGTGG...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCCACCCCAGCCTGGATTaGAGTGACATTCCCCATGGA +
Preference number: 4 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESHPSLD*SDIPHG
Trigger: TCCATGGGGAATGTCACTGCAATCCAGGCTGGGGTG...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGGCTGCACTCGCACTTaGCGTCCTTGCACGTCCCGT +
Preference number: 4 (lower is better)
Translates to: HFGRLFGESGLDCATGESGCTRT*RPCTSR
Trigger: ACGGGACGTGCAAGGACGGCAAGTGCGAGTGCAGCC...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATCGTTCCATCCTTGGCTaGACTCGCACTTGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHRSILG*TRTCRP
Trigger: AGGACGGCAAGTGCGAGTGCAGCCAAGGATGGAACG...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCATCTCCCATTGCTGTTaGACAAGCCGGGGCAACCCT +
Preference number: 4 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESISHCC*TSRGNP
Trigger: AGGGTTGCCCCGGCTTGTGCAACAGCAATGGGAGAT...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATGTGTGCATCTCCCATTaGTGTTGCACAAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHVCISH*CCTSRG
Trigger: GCCCCGGCTTGTGCAACAGCAATGGGAGATGCACAC...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCATTGTCCATGTCCCCGTaGAGGTTTGTAACCACCCCA +
Preference number: 4 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKALSMSP*RFVTTP
Trigger: TGGGGTGGTTACAAACCTGCACGGGGACATGGACAA...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATATGGACCGGATGGTCTaGATGGTGTGGCGAGCCACA +
Preference number: 4 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYMDRMV*MVWRAT
Trigger: TGTGGCTCGCCACACCATGCAGACCATCCGGTCCAT...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGCCCAGGAAAGCTGTTTaGAGAAGCAGCCCTTCCTCG +
Preference number: 4 (lower is better)
Translates to: EGSLESPVWIVLQENLHRPRKAV*RSSPSS
Trigger: CGAGGAAGGGCTGCTTCTGCAAACAGCTTTCCTGGG...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TCTTTGTTTCTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGGCGCCTGCTCCAGAATaGGCGCCTTCTCCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: SLFLVCVACVSAMCLSAEAPAPE*APSPRP
Trigger: TGGACGAGGAGAAGGCGCGCATTCTGGAGCAGGCGC...CTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAGAAACAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTGCAAAGGCTGCAGGGTaGGTTGCCCTGGGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: RVYLRCVCLQSSVILEGSAKAAG*VALGCL
Trigger: CAAACAACCCAGGGCAACCCACCCTGCAGCCTTTGC...AGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGGTGTTTCTAGGAAGTaGCCGGGTAGGCGGAGAATA +
Preference number: 4 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKAGVSRK*PGRRRI
Trigger: TATTCTCCGCCTACCCGGCCACTTCCTAGAAACACC...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGCAGTGCCAGCCGTTTTaGTCCAGTGTGCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: EGSLESPVWIVLQENLHRQCQPF*SSVHLP
Trigger: TGGGAGATGCACACTGGACCAAAACGGCTGGCACTG...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCACCTCTCCACCCTGGCTaGCAAACGCAGTGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPPLHPG*QTQCQP
Trigger: CGGCTGGCACTGCGTTTGCCAGCCAGGGTGGAGAGG...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCACAAATCTCCGGTGACTaGGTCCGTAGCCAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKAQISGD*VRSQVV
Trigger: TACTACCTGGCTACGGACCCAGTCACCGGAGATTTG...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGCTCCATCCCCACACCTaGCCTCGTCAAAGGGAAGGC +
Preference number: 4 (lower is better)
Translates to: YLRCVCLQSSVILEGSLELHPHT*PRQREG
Trigger: GCCTTCCCTTTGACGAGGCCAGGTGTGGGGATGGAG...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTCATCTTCCTCTCTGCTaGATGACTCGATGTCCACCG +
Preference number: 4 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGHLPLC*MTRCPP
Trigger: CGGTGGACATCGAGTCATCCAGCAGAGAGGAAGATG...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGAGCCAATGGACCGGATaGTCTGCATGGTGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: VACVSAMCLSAEQCHFGRSQWTG*SAWCGE
Trigger: CTCGCCACACCATGCAGACCATCCGGTCCATTGGCT...CCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCAGTCTGCACGCGGCCTTaGCTCACGGCCAGCATGACG +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPVCTRP*LTASMT
Trigger: CGTCATGCTGGCCGTGAGCCAAGGCCGCGTGCAGAC...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATCGTTCACCACCGTGGTaGACTGAGACACGGTCACGT +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHRSPPW*TETRSR
Trigger: ACGTGACCGTGTCTCAGTCCACCACGGTGGTGAACG...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATTGCCGTTCACCACCGTaGTGGACTGAGACACGGTCA +
Preference number: 4 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYCRSPP*WTETRS
Trigger: TGACCGTGTCTCAGTCCACCACGGTGGTGAACGGCA...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTGGATACACACCCCGTaGTTAGAACATCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGWIHTP*LEHPGS
Trigger: AGACCCTGGATGTTCTAATCACGGGGTGTGTATCCA...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCATTGTTCCCGTCAGCTTaGCCATTGCAACTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKALFPSA*PLQLGH
Trigger: ATGCCCAAGTTGCAATGGTCAAGCTGACGGGAACAA...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCATCTCATCAGTTTCCGTaGTGTAAAGGACCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKASHQFP*CKGPRC
Trigger: ACAGCGGGGTCCTTTACATCACGGAAACTGATGAGA...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGACTGGTGAGTACCGTTaGTGTCAAAGATGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: LESPVWIVLQENLHRGGPTGEYR*CQRCRA
Trigger: AGCTCTACATCTTTGACATCAACGGTACTCACCAGT...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATCCGGCCGAATACGTTaGCTTTGCCCTGGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: SLVPVSFYKAARESSWVLSGRIR*LCPGLV
Trigger: AACAAGCCCAGGGCAAAGTCAACGTATTCGGCCGGA...TAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp GTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGTCCGGCCGAATACGTTaGCTTTGCCCTGGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: VACVSAMCLSAEQCHFGRSGRIR*LCPGLV
Trigger: AACAAGCCCAGGGCAAAGTCAACGTATTCGGCCGGA...CCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGACCACCGTGGTGGACTaGGACACGGTCACGTTGATC +
Preference number: 4 (lower is better)
Translates to: YLRCVCLQSSVILEGSLETTVVD*DTVTLI
Trigger: GATCAACGTGACCGTGTCTCAGTCCACCACGGTGGT...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp AATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACTTTCCTTTTCCCGTCTaGTCTTGGTCAAGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: NPRRSRRPLCQCPFTKQHFPFPV*SWSRSS
Trigger: ACTGCTCCTTGACCAAGAGCAGACGGGAAAAGGAAA...GTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR GCA 90 bp GTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGTGTGTATCCCGGGGTTaGCGTACTGAACAGTGGCGT +
Preference number: 4 (lower is better)
Translates to: VACVSAMCLSAEQCHFGRCVSRG*RTEQWR
Trigger: ACGCCACTGTTCAGTACGGCAACCCCGGGATACACA...CCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCACGGTGCACCTCCAGCTaGAGTACTTTGAAGACTTCT +
Preference number: 4 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKARCTSS*STLKTS
Trigger: AGAAGTCTTCAAAGTACTGCAGCTGGAGGTGCACCG...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp AAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCATTCATGGGTGGCTGCACTCGCACTTaGCGTCCTTGCACGTCCCGT +
Preference number: 4 (lower is better)
Translates to: KNLTSFAVDGGQGEAFMGGCTRT*RPCTSR
Trigger: ACGGGACGTGCAAGGACGGCAAGTGCGAGTGCAGCC...ACCCATGAATGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR GCA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATATCTCCCATTGCTGTTaGACAAGCCGGGGCAACCCT +
Preference number: 4 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYISHCC*TSRGNP
Trigger: AGGGTTGCCCCGGCTTGTGCAACAGCAATGGGAGAT...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCACGTTTTGGTCCAGTGTaGATCTCCCATTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKARFGPV*ISHCCC
Trigger: GCAACAGCAATGGGAGATGCACACTGGACCAAAACG...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCACTCCACCAGATTCTaGCCGTTCTCACCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: VACVSAMCLSAEQCHFGRHSTRF*PFSPGR
Trigger: TCTTCCCGGTGAGAACGGGCAGAATCTGGTGGAGTG...CCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTTCACTGCCATTAGCTTaGTACTCGGCAGCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVSLPLA*YSAARE
Trigger: CTCTCTGGCTGCCGAGTAGCAAGCTAATGGCAGTGA...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATTGGTCCCTCTCTGGATaGTGGCAATTTGACCGGTGG +
Preference number: 4 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYWSLSG*WQFDRW
Trigger: CCACCGGTCAAATTGCCAGCATCCAGAGAGGGACCA...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTCCCAGGAAAGCTGTTTaGAGAAGCAGCCCTTCCTCG +
Preference number: 4 (lower is better)
Translates to: RVYLRCVCLQSSVILEGSPRKAV*RSSPSS
Trigger: CGAGGAAGGGCTGCTTCTGCAAACAGCTTTCCTGGG...AGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATATAGCGCACATGCAGTaGCAGGGCACCGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHIAHMQ*QGTELH
Trigger: ATGCAGTTCGGTGCCCTGGCACTGCATGTGCGCTAT...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGTTTCCCGTCTGCTCTTaGTCAAGGAGCAGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: GRLFGESGLDCATGESAQFPVCS*SRSSKA
Trigger: GGCCTTACTGCTCCTTGACCAAGAGCAGACGGGAAA...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCATATAGGACTTCTGCGTaGGGACCCTACACTCCTCAT +
Preference number: 4 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKAYRTSA*GPYTPH
Trigger: ATGAGGAGTGTAGGGTCCCCACGCAGAAGTCCTATA...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGCGATACAGTGTTTGTTaGCACGGTGTCAGAATTCAC +
Preference number: 4 (lower is better)
Translates to: LESPVWIVLQENLHRGGPRYSVC*HGVRIH
Trigger: GTGAATTCTGACACCGTGCCAACAAACACTGTATCG...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTCACTCTCCATTTCCATaGCAATTTCGGGGGCATTCC +
Preference number: 4 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGHSPFP*QFRGHS
Trigger: GGAATGCCCCCGAAATTGCCATGGAAATGGAGAGTG...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCTGCCACCCCAGCCTaGATTGCAGTGACATTCCCC +
Preference number: 4 (lower is better)
Translates to: HFGRLFGESGLDCATGESAATPA*IAVTFP
Trigger: GGGGAATGTCACTGCAATCCAGGCTGGGGTGGCAGC...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TCTTTGTTTCTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGGGGGCCAGTCCAATTTaGGTCGCAAGTGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: SLFLVCVACVSAMCLSAEGASPI*VASAGA
Trigger: GGCTCCTGCACTTGCGACCCAAATTGGACTGGCCCC...CTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAGAAACAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTACAGTGCCAGCCGTTTTaGTCCAGTGTGCATCTCCCA +
Preference number: 4 (lower is better)
Translates to: SLVPVSFYKAARESSWVLQCQPF*SSVHLP
Trigger: TGGGAGATGCACACTGGACCAAAACGGCTGGCACTG...TAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATTACAGAGGGTCTCCATaGCTACGTCACAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYYRGSP*LRHSLL
Trigger: GAGCAGGCTGTGACGTAGCCATGGAGACCCTCTGTA...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTGGTCATAGAAGGACTTaGCAGCTTGCTGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGGHRRT*QLAEMV
Trigger: CACCATCTCAGCAAGCTGCCAAGTCCTTCTATGACC...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCATCAGCTGTTAGTACTTaGCCTCTGATGACGGACGCA +
Preference number: 4 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKASAVST*PLMTDA
Trigger: TGCGTCCGTCATCAGAGGCCAAGTACTAACAGCTGA...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTGCAGGAAACCACTTCTaGAAGAGTCTCCCAACCACG +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVAGNHF*KSLPTT
Trigger: CGTGGTTGGGAGACTCTTCCAGAAGTGGTTTCCTGC...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCCAAATCTCCGGTGACTaGGTCCGTAGCCAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESQISGD*VRSQVV
Trigger: TACTACCTGGCTACGGACCCAGTCACCGGAGATTTG...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGTAGCAGTCACAGTTaGCGTCGTTCTTGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: GRLFGESGLDCATGESAQGSSHS*RRSCSH
Trigger: GTGACTGCAAGAACGACGCCAACTGTGACTGCTACC...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTGCGGTAGTAGCCAATaGACCGGATGGTCTGCATGG +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHCGSSQ*TGWSAW
Trigger: CCATGCAGACCATCCGGTCCATTGGCTACTACCGCA...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATGGGACAAGAAGGCCTTaGCTTGCCTTGCCACTTGCT +
Preference number: 4 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYGTRRP*LALPLA
Trigger: AGCAAGTGGCAAGGCAAGCCAAGGCCTTCTTGTCCC...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGCGTTCACCACCGTGGTaGACTGAGACACGGTCACGT +
Preference number: 4 (lower is better)
Translates to: YLRCVCLQSSVILEGSLERSPPW*TETRSR
Trigger: ACGTGACCGTGTCTCAGTCCACCACGGTGGTGAACG...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp GTAAAATCCATTATTAAATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTGCCCTGGGTTGTTTaGAGGTTGCTCGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: VKSIIKSPPKQTSLVPVSLPWVV*RLLALT
Trigger: AGTGAGAGCGAGCAACCTTCAAACAACCCAGGGCAA...GGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATTTAATAATGGATTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR TCA 90 bp TCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATTGCCCTGGGTTGTTTaGAGGTTGCTCGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: SLVPVSFYKAARESSWVLLPWVV*RLLALT
Trigger: AGTGAGAGCGAGCAACCTTCAAACAACCCAGGGCAA...TAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTAATGGCCAGGAGCACTaGGACCCCTACAGCACACAG +
Preference number: 4 (lower is better)
Translates to: HFGRLFGESGLDCATGESNGQEH*DPYSTQ
Trigger: CTGTGTGCTGTAGGGGTCTCAGTGCTCCTGGCCATT...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAATCCAAGTACTGGATaGAGCCAGCTTCGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYNPSTG*SQLRAG
Trigger: GCCTGCACGAAGCTGGCTTCATCCAGTACTTGGATT...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTAAGCGCAAGAGCCCATaGTGCAAATCCCACGACCCC +
Preference number: 4 (lower is better)
Translates to: HFGRLFGESGLDCATGESKRKSP*CKSHDP
Trigger: GGGGTCGTGGGATTTGCATCATGGGCTCTTGCGCTT...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TCTTTGTTTCTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGGTAAGTCCCGTGGCCTaGGCACTGGTCTGCACACAT +
Preference number: 4 (lower is better)
Translates to: SLFLVCVACVSAMCLSAEVSPVA*ALVCTH
Trigger: ATGTGTGCAGACCAGTGCTCAGGCCACGGGACTTAC...CTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAGAAACAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGCACACAGTGTGGTACTaGGTGAGGAATGGGGAACGC +
Preference number: 4 (lower is better)
Translates to: YLRCVCLQSSVILEGSLEHTVWY*VRNGER
Trigger: GCGTTCCCCATTCCTCACTCAGTACCACACTGTGTG...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCCCGTCTTATCCCAGATaGACGTGTAGGCCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESPSYPR*TCRPSL
Trigger: CAAACTTGGCCTACACGTTCATCTGGGATAAGACGG...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCTTGTTCCCGTCAGCTTaGCCATTGCAACTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESLFPSA*PLQLGH
Trigger: ATGCCCAAGTTGCAATGGTCAAGCTGACGGGAACAA...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTCCTTTGGGACTCATaGGCGTTGCTTCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHFLWDS*ALLPQP
Trigger: AGGCTGTGGAAGCAACGCTCATGAGTCCCAAAGGAA...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCTCTCATCAGTTTCCGTaGTGTAAAGGACCCCGCTGT +
Preference number: 4 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESSHQFP*CKGPRC
Trigger: ACAGCGGGGTCCTTTACATCACGGAAACTGATGAGA...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp AAATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCATGTCAGTTACAGCGGTaGCGTCATTGTCATTGCTGT +
Preference number: 4 (lower is better)
Translates to: KSPPKQTSLVPVSFYKAACQLQR*RHCHCC
Trigger: ACAGCAATGACAATGACGTCACCGCTGTAACTGACA...TGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR TCA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCATCTGCCTTCTATACTTaGATAAGACCCTCCGACTCG +
Preference number: 4 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKASAFYT*IRPSDS
Trigger: CGAGTCGGAGGGTCTTATTCAAGTATAGAAGGCAGA...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCACATATTGGATCTCCTTaGTGCGCCCATGAGCATCAA +
Preference number: 4 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKAHIGSP*CAHEHQ
Trigger: TTGATGCTCATGGGCGCATCAAGGAGATCCAATATG...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCAGAGACACGGTCACGTTaGTCCCGTTCTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPETRSR*SRSPGP
Trigger: AGGCCCTGGAGAACGGGATCAACGTGACCGTGTCTC...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCATTTCCGCACAGAATaGCACTCCTCTTCGAGTTGC +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVHFRTE*HSSSSC
Trigger: GCAACTCGAAGAGGAGTGGCATTCTGTGCGGAAATG...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTCTCAGGGGACATCACTaGTTCGTTTTCCGTATCCGC +
Preference number: 4 (lower is better)
Translates to: RVYLRCVCLQSSVILEGSLRGHH*FVFRIR
Trigger: GCGGATACGGAAAACGAAGCAGTGATGTCCCCTGAG...AGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTACCAGTGGTACATTACTaGCAAGGACCCAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SLVPVSFYKAARESSWVLPVVHY*QGPSCP
Trigger: AGGACAGCTGGGTCCTTGGCAGTAATGTACCACTGG...TAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp AAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCATTCATGGGTCCCTACAGCACACAGTaGGGTGCACCTCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KNLTSFAVDGGQGEAFMGPYSTQ*GAPPAA
Trigger: TGCAGCTGGAGGTGCACCGCACTGTGTGCTGTAGGG...ACCCATGAATGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR GCA 90 bp AAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCACGCACTTGCCGTCCTTaGACGTCCCGTGCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: KTSKNLTSFAVDGGQGEARTCRP*TSRAQH
Trigger: GTGCTGAGCACGGGACGTGCAAGGACGGCAAGTGCG...TGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR GCA 90 bp AAATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCAAGTTGGCGTCGTTCTTaGAGTCACATTCCGAAGGTA +
Preference number: 4 (lower is better)
Translates to: KSPPKQTSLVPVSFYKAASWRRS*SHIPKV
Trigger: TACCTTCGGAATGTGACTGCAAGAACGACGCCAACT...TGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR GCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTCACTGCCATTAGCTTaGTACTCGGCAGCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHSLPLA*YSAARE
Trigger: CTCTCTGGCTGCCGAGTAGCAAGCTAATGGCAGTGA...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGGGATTGTAGATGTTaGGGTAGTAGCCAATGGACC +
Preference number: 4 (lower is better)
Translates to: EGSLESPVWIVLQENLHRGDCRC*GSSQWT
Trigger: GGTCCATTGGCTACTACCGCAACATCTACAATCCCC...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGATCAGGGGACCAATTTaGCTGTATCTAATGGTGCAA +
Preference number: 4 (lower is better)
Translates to: LESPVWIVLQENLHRGGPIRGPI*LYLMVQ
Trigger: TTGCACCATTAGATACAGGCAAATTGGTCCCCTGAT...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGTCACTGTCCAGCCACTaGCTTTACTGTAGACTCGAG +
Preference number: 4 (lower is better)
Translates to: EGSLESPVWIVLQENLHRSLSSH*LYCRLE
Trigger: CTCGAGTCTACAGTAAAGGCAGTGGCTGGACAGTGA...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCTATAGGACTTCTGCGTaGGGACCCTACACTCCTCAT +
Preference number: 4 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESYRTSA*GPYTPH
Trigger: ATGAGGAGTGTAGGGTCCCCACGCAGAAGTCCTATA...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGCTTTCAAGGTTTCACTaGAACTATAGGACTTCTGCG +
Preference number: 4 (lower is better)
Translates to: LESPVWIVLQENLHRGGPLSRFH*NYRTSA
Trigger: CGCAGAAGTCCTATAGTTCCAGTGAAACCTTGAAAG...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCGTCGGCTTCTCTGTaGACCAAATCCTTTACTCTG +
Preference number: 4 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGSSASL*TKSFTL
Trigger: CAGAGTAAAGGATTTGGTCCACAGAGAAGCCGACGA...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGCCAGAATCCAAGTACTaGATGAAGCCAGCTTCGTGC +
Preference number: 4 (lower is better)
Translates to: GRLFGESGLDCATGESAQPESKY*MKPASC
Trigger: GCACGAAGCTGGCTTCATCCAGTACTTGGATTCTGG...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTAACCCGGGGAAACAATaGCAAGTTCCAGAAACACAC +
Preference number: 4 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGNPGKQ*QVPETH
Trigger: GTGTGTTTCTGGAACTTGCCATTGTTTCCCCGGGTT...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TCTTTGTTTCTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGTCTCCGTTCCATCCTTaGCTGCACTCGCACTTGCCG +
Preference number: 4 (lower is better)
Translates to: SLFLVCVACVSAMCLSAESPFHP*LHSHLP
Trigger: CGGCAAGTGCGAGTGCAGCCAAGGATGGAACGGAGA...CTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAGAAACAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GTAAAATCCATTATTAAATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCGGCAGCTTGCTGAGATaGTGTCTGAAGGCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: VKSIIKSPPKQTSLVPVSGSLLR*CLKALA
Trigger: AGCCAAAGCCTTCAGACACCATCTCAGCAAGCTGCC...GGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATTTAATAATGGATTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CCA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGTCAGCTGTTAGTACTTaGCCTCTGATGACGGACGCA +
Preference number: 4 (lower is better)
Translates to: GRLFGESGLDCATGESAQSAVST*PLMTDA
Trigger: TGCGTCCGTCATCAGAGGCCAAGTACTAACAGCTGA...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp AATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGTACTGAGTGAGGAATaGGGAACGCTCAAATACCAA +
Preference number: 4 (lower is better)
Translates to: NPRRSRRPLCQCPFTKQHVLSEE*GTLKYQ
Trigger: TTGGTATTTGAGCGTTCCCCATTCCTCACTCAGTAC...GTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CCA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCTGTACCCTGCCGCTCTaGAACTCAGGTAGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESCTLPL*NSGRKV
Trigger: AACTTTCCTACCTGAGTTCCAGAGCGGCAGGGTACA...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATGCAGGAAACCACTTCTaGAAGAGTCTCCCAACCACG +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHAGNHF*KSLPTT
Trigger: CGTGGTTGGGAGACTCTTCCAGAAGTGGTTTCCTGC...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCACACAGCAATGGCCGTaGCTGACTCCAGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: SFWKALWRVRFGLCYRRITQQWP*LTPGWS
Trigger: AGACCACCCTGGAGTCAGCCACGGCCATTGCTGTGT...GATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTAGGTAGCAGTCACAGTTaGCGTCGTTCTTGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: SLVPVSFYKAARESSWVLGSSHS*RRSCSH
Trigger: GTGACTGCAAGAACGACGCCAACTGTGACTGCTACC...TAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTCAACCATATCACCTaGTTATCAGGAGACACCACC +
Preference number: 4 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKAVNHIT*LSGDTT
Trigger: GGTGGTGTCTCCTGATAACCAGGTGATATGGTTGAC...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTACCCGTTGGTGCCTATaGTCAACCATATCACCTGGT +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVTRWCL*STISPG
Trigger: ACCAGGTGATATGGTTGACCATAGGCACCAACGGGT...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATTCCCTCTCTGGATGCTaGCAATTTGACCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYSLSGC*QFDRWM
Trigger: CATCCACCGGTCAAATTGCCAGCATCCAGAGAGGGA...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GTAAAATCCATTATTAAATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTACTGCCGCTGGCTATaGAGCAGAAGAACCATGGAC +
Preference number: 4 (lower is better)
Translates to: VKSIIKSPPKQTSLVPVSYCRWL*SRRTMD
Trigger: GTCCATGGTTCTTCTGCTCCATAGCCAGCGGCAGTA...GGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATTTAATAATGGATTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CCA 90 bp TCTTTGTTTCTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGAGCCAATGGACCGGATaGTCTGCATGGTGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: SLFLVCVACVSAMCLSAESQWTG*SAWCGE
Trigger: CTCGCCACACCATGCAGACCATCCGGTCCATTGGCT...CTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAGAAACAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
3UTR CAA 72 bp CAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTaGGATTGTGCTACAGGAGAATCTGCACAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: QCHFGRLFGESG*DCATGESAQGW
Trigger: CCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCCCTGTCCCTGTTTTaGATAGGAAATGCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGSLSLF*IGNACF
Trigger: AAAGCAGGCATTTCCTATTCAAAACAGGGACAGGGA...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCCCTCAGGGGAAGACCTaGAGAAGGTGGATAACGGTG +
Preference number: 4 (lower is better)
Translates to: SFWKALWRVRFGLCYRRIPQGKT*RRWITV
Trigger: CACCGTTATCCACCTTCTTCAGGTCTTCCCCTGAGG...GATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTGGTAATCTTAAGAACTaGCTTGTACCCTGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVGNLKN*LVPCRS
Trigger: AGAGCGGCAGGGTACAAGTCAGTTCTTAAGATTACC...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCAAGTTATCCATGGGGTTaGTCGCGAGGTCAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPSYPWG*SRGQWA
Trigger: GGCCCACTGACCTCGCGATCAACCCCATGGATAACT...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCAGCGATGCGGACCTaGCGGTTTTCAGTGATCTGT +
Preference number: 4 (lower is better)
Translates to: HFGRLFGESGLDCATGESAAMRT*RFSVIC
Trigger: ACAGATCACTGAAAACCGTCAGGTCCGCATCGCTGC...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTTCCTTGATGCGCCCATaGGCATCAAAGTGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVSLMRP*ASKCFV
Trigger: TACAAAGCACTTTGATGCTCATGGGCGCATCAAGGA...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp ATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGAGTTGTACCGCCACATaGTCTTTTCGTTTAGGTAAA +
Preference number: 4 (lower is better)
Translates to: IPAEADVPCASVLLQSSTSCTAT*SFRLGK
Trigger: TTTACCTAAACGAAAAGATCATGTGGCGGTACAACT...CGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR TCA 90 bp GTAAAATCCATTATTAAATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCATTTCAGTGCCCCTCTaGCGCAGGAAACCATCTTCA +
Preference number: 4 (lower is better)
Translates to: VKSIIKSPPKQTSLVPVSISVPL*RRKPSS
Trigger: TGAAGATGGTTTCCTGCGTCAGAGGGGCACTGAAAT...GGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATTTAATAATGGATTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR TCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCACTTGCCACTTGCTGCTaGACTCCAAAGATGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPLATCC*TPKMGG
Trigger: GCCGCCCATCTTTGGAGTTCAGCAGCAAGTGGCAAG...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATCATTTCCGCACAGAATaGCACTCCTCTTCGAGTTGC +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHHFRTE*HSSSSC
Trigger: GCAACTCGAAGAGGAGTGGCATTCTGTGCGGAAATG...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAAGATGGCGGCAAAGGCTaGAGGGTGGGTTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: FSFLILPVQLSAAICVCKDGGKG*RVGCPG
Trigger: CCCAGGGCAACCCACCCTGCAGCCTTTGCCGCCATC...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTGGGAACCTCTTGAATTaGTCTCCGGCCAATATCAAG +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVGNLLN*SPANIK
Trigger: CTTGATATTGGCCGGAGAGCAATTCAAGAGGTTCCC...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp AATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGTACACTCCGATCAATaGATCCTTCTGAAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: NPRRSRRPLCQCPFTKQHVHSDQ*ILLKRD
Trigger: ATCTCTCTTCAGAAGGATGCATTGATCGGAGTGTAC...GTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR GCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCACGGCCCTTGGAGTATTaGCCGTTGCCACTACAGAGC +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPRPLEY*PLPLQS
Trigger: GCTCTGTAGTGGCAACGGGCAATACTCCAAGGGCCG...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp AAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCATTCATGGGTCGTTCCATCCTTGGCTaGACTCGCACTTGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: KNLTSFAVDGGQGEAFMGRSILG*TRTCRP
Trigger: AGGACGGCAAGTGCGAGTGCAGCCAAGGATGGAACG...ACCCATGAATGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR GCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCAGGCTGGCAAACGCAGTaGCAGCCGTTTTGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPGWQTQ*QPFWSS
Trigger: ACTGGACCAAAACGGCTGGCACTGCGTTTGCCAGCC...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCGTCAGCTTGACCATTaGAACTTGGGCATGAGATGC +
Preference number: 4 (lower is better)
Translates to: VACVSAMCLSAEQCHFGRRQLDH*NLGMRC
Trigger: GCATCTCATGCCCAAGTTGCAATGGTCAAGCTGACG...CCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTCCCCTACGTATAGACTaGCGTCGATCCCACAGGCAA +
Preference number: 4 (lower is better)
Translates to: HFGRLFGESGLDCATGESPLRID*RRSHRQ
Trigger: TTGCCTGTGGGATCGACGGCAGTCTATACGTAGGGG...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGTATTCGAAGATGTACTaGCGCTGGCTATGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: GRLFGESGLDCATGESAQYSKMY*RWLWSR
Trigger: TCTGCTCCATAGCCAGCGGCAGTACATCTTCGAATA...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp AATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACATTCAAAAATTTCAGTaGCCCTCTGACGCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: NPRRSRRPLCQCPFTKQHIQKFQ*PSDAGN
Trigger: GTTTCCTGCGTCAGAGGGGCACTGAAATTTTTGAAT...GTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CCA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGTGCCCCAAAGTCTCATaGCATGCTCAGGGGACATCA +
Preference number: 4 (lower is better)
Translates to: YLRCVCLQSSVILEGSLECPKVS*HAQGTS
Trigger: TGATGTCCCCTGAGCATGCCATGAGACTTTGGGGCA...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGGGTGTTTCTAGGAAGTaGCCGGGTAGGCGGAGAATA +
Preference number: 4 (lower is better)
Translates to: YLRCVCLQSSVILEGSLEGVSRK*PGRRRI
Trigger: TATTCTCCGCCTACCCGGCCACTTCCTAGAAACACC...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATCACTCTCCATTTCCATaGCAATTTCGGGGGCATTCC +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHHSPFP*QFRGHS
Trigger: GGAATGCCCCCGAAATTGCCATGGAAATGGAGAGTG...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp AAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCAGGGGCCAGTCCAATTTaGGTCGCAAGTGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: KTSKNLTSFAVDGGQGEAGASPI*VASAGA
Trigger: GGCTCCTGCACTTGCGACCCAAATTGGACTGGCCCC...TGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR CCA 90 bp ACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCATTCTCTCCGTTCCATCCTTaGCTGCACTCGCACTTGCCG +
Preference number: 4 (lower is better)
Translates to: TSKNLTSFAVDGGQGEAFSPFHP*LHSHLP
Trigger: CGGCAAGTGCGAGTGCAGCCAAGGATGGAACGGAGA...GAATGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR CCA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGGGCAGCTTGCTGAGATaGTGTCTGAAGGCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: YLRCVCLQSSVILEGSLEGSLLR*CLKALA
Trigger: AGCCAAAGCCTTCAGACACCATCTCAGCAAGCTGCC...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp AAATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACTGTTCCTGGAATTGTaGTTTCTTCATGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: KSPPKQTSLVPVSFYKAALFLEL*FLHAGP
Trigger: AGGTCCTGCATGAAGAAACCACAATTCCAGGAACAG...TGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CCA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATTGTACCCTGCCGCTCTaGAACTCAGGTAGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYCTLPL*NSGRKV
Trigger: AACTTTCCTACCTGAGTTCCAGAGCGGCAGGGTACA...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAATACTGCCGCTGGCTATaGAGCAGAAGAACCATGGAC +
Preference number: 4 (lower is better)
Translates to: VLRVYLRCVCLQSSVILEYCRWL*SRRTMD
Trigger: GTCCATGGTTCTTCTGCTCCATAGCCAGCGGCAGTA...TTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATAAGATGTACTGCCGCTaGCTATGGAGCAGAAGAACC +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHKMYCR*LWSRRT
Trigger: GGTTCTTCTGCTCCATAGCCAGCGGCAGTACATCTT...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGCTAAATATCTCATATTaGATCTCCTTGATGCGCCCA +
Preference number: 4 (lower is better)
Translates to: LESPVWIVLQENLHRGGPLNISY*ISLMRP
Trigger: TGGGCGCATCAAGGAGATCCAATATGAGATATTTAG...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTGGGGTTGAGCAAGTaGAGGTTTCCATTTAGGTCG +
Preference number: 4 (lower is better)
Translates to: VACVSAMCLSAEQCHFGRLGLSK*RFPFRS
Trigger: CGACCTAAATGGAAACCTCCACTTGCTCAACCCCAG...CCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTATAGCATTGTGCAGATaGAAGCCAAACGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVIALCR*KPNVTS
Trigger: GCTGGTGACGTTTGGCTTCCATCTGCACAATGCTAT...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTTTCCGTATCCGCATCTaGCCCTGCACTGATGGAGTA +
Preference number: 4 (lower is better)
Translates to: HFGRLFGESGLDCATGESFRIRI*PCTDGV
Trigger: TACTCCATCAGTGCAGGGTCAGATGCGGATACGGAA...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp AAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCAAATGGCCAGGAGCACTaGGACCCCTACAGCACACAG +
Preference number: 4 (lower is better)
Translates to: KTSKNLTSFAVDGGQGEANGQEH*DPYSTQ
Trigger: CTGTGTGCTGTAGGGGTCTCAGTGCTCCTGGCCATT...TGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR TCA 90 bp AAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCAAAGCGCAAGAGCCCATaGTGCAAATCCCACGACCCC +
Preference number: 4 (lower is better)
Translates to: KTSKNLTSFAVDGGQGEAKRKSP*CKSHDP
Trigger: GGGGTCGTGGGATTTGCATCATGGGCTCTTGCGCTT...TGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR TCA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGTTTGATCAACCTTTCTaGTCATGGTTCCATCAACAA +
Preference number: 4 (lower is better)
Translates to: LESPVWIVLQENLHRGGPFDQPF*SWFHQQ
Trigger: TTGTTGATGGAACCATGATCAGAAAGGTTGATCAAA...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATATAAACAGAGCCAGATaGCATTGTGTATCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHINRAR*HCVSRG
Trigger: ACCCCGGGATACACAATGGCATCTGGCTCTGTTTAT...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTCCGTCTGCTGTAAGTaGCAGTTGAGGCCAAATAGA +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHSVCCK*QLRPNR
Trigger: TCTATTTGGCCTCAACTGGCACTTACAGCAGACGGA...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp AAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCACGGCCCTTGGAGTATTaGCCGTTGCCACTACAGAGC +
Preference number: 4 (lower is better)
Translates to: KTSKNLTSFAVDGGQGEARPLEY*PLPLQS
Trigger: GCTCTGTAGTGGCAACGGGCAATACTCCAAGGGCCG...TGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR GCA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAAGGCTGCACTCGCACTTaGCGTCCTTGCACGTCCCGT +
Preference number: 4 (lower is better)
Translates to: FSFLILPVQLSAAICVCKGCTRT*RPCTSR
Trigger: ACGGGACGTGCAAGGACGGCAAGTGCGAGTGCAGCC...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTAAGAAGCGCCACCATTTaGCACCAAGTCAAACATTCC +
Preference number: 4 (lower is better)
Translates to: SLVPVSFYKAARESSWVLRSATI*HQVKHS
Trigger: GGAATGTTTGACTTGGTGGCAAATGGTGGCGCTTCT...TAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAGTTGGCGTCGTTCTTaGAGTCACATTCCGAAGGTA +
Preference number: 4 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYSWRRS*SHIPKV
Trigger: TACCTTCGGAATGTGACTGCAAGAACGACGCCAACT...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp AAATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCAGATATTTCCCAGATCTaGAATGTACAGAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: KSPPKQTSLVPVSFYKAADISQI*NVQSAI
Trigger: GATGGCACTCTGTACATTGCAGATCTGGGAAATATC...TGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR GCA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGATATTTCCCAGATCTaGAATGTACAGAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKADISQI*NVQSAI
Trigger: GATGGCACTCTGTACATTGCAGATCTGGGAAATATC...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGTATTCGAAGATGTACTaGCGCTGGCTATGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: VACVSAMCLSAEQCHFGRYSKMY*RWLWSR
Trigger: TCTGCTCCATAGCCAGCGGCAGTACATCTTCGAATA...CCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCCCGAATTTTCCAAACTaGTCGACTTTGCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESPNFPN*STLPEM
Trigger: CATCTCTGGCAAAGTCGAGCAGTTTGGAAAATTCGG...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TCAGGGTTTCCTTTGCTTATCAGTGACAAGGATTCTATTCGTCAGTTTTTCCCTTTGAGCACGTTGGTCTaGACGCGGCCTTGGCTCACG +
Preference number: 4 (lower is better)
Translates to: SGFPLLISDKDSIRQFFPLSTLV*TRPWLT
Trigger: CGTGAGCCAAGGCCGCGTGCAGACCAACGTGCTCAA...AGGGAAAAACTGACGAATAGAATCCTTGTCACTGATAAGCAAAGGAAACCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR GCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCAATAGCGCACATGCAGTaGCAGGGCACCGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPIAHMQ*QGTELH
Trigger: ATGCAGTTCGGTGCCCTGGCACTGCATGTGCGCTAT...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TCAGGGTTTCCTTTGCTTATCAGTGACAAGGATTCTATTCGTCAGTTTTTCCCTGGCGGGGCCGGACTCTaGTTCCTTCTATTGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SGFPLLISDKDSIRQFFPGGAGL*FLLLVR
Trigger: CCTGACCAATAGAAGGAACCAGAGTCCGGCCCCGCC...AGGGAAAAACTGACGAATAGAATCCTTGTCACTGATAAGCAAAGGAAACCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CCA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGCGATACAGTGTTTGTTaGCACGGTGTCAGAATTCAC +
Preference number: 4 (lower is better)
Translates to: EGSLESPVWIVLQENLHRRYSVC*HGVRIH
Trigger: GTGAATTCTGACACCGTGCCAACAAACACTGTATCG...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAACCAGAATCCAAGTACTaGATGAAGCCAGCTTCGTGC +
Preference number: 4 (lower is better)
Translates to: VLRVYLRCVCLQSSVILEPESKY*MKPASC
Trigger: GCACGAAGCTGGCTTCATCCAGTACTTGGATTCTGG...TTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CCAAGTAGAAAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGCTGCCACCCCAGCCTaGATTGCAGTGACATTCCCC +
Preference number: 4 (lower is better)
Translates to: PSRKTSKNLTSFAVDGGQAATPA*IAVTFP
Trigger: GGGGAATGTCACTGCAATCCAGGCTGGGGTGGCAGC...CTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTTTCTACTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR CCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTAACGGTATGACGGCCTaGGTCATGGTAATCTTAAGA +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVNGMTA*VMVILR
Trigger: TCTTAAGATTACCATGACCCAGGCCGTCATACCGTT...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTCTTTTCCGTCTTGGTaGTCCGATCAAAGTCCACTG +
Preference number: 4 (lower is better)
Translates to: RVYLRCVCLQSSVILEGSSFPSW*SDQSPL
Trigger: CAGTGGACTTTGATCGGACCACCAAGACGGAAAAGA...AGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGAGATCTTTTCCGTCTTaGTGGTCCGATCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: EGSLESPVWIVLQENLHRRSFPS*WSDQSP
Trigger: TGGACTTTGATCGGACCACCAAGACGGAAAAGATCT...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TCTTTGTTTCTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGTCCCTCTCTGGATGCTaGCAATTTGACCGGTGGATG +
Preference number: 4 (lower is better)
Translates to: SLFLVCVACVSAMCLSAESLSGC*QFDRWM
Trigger: CATCCACCGGTCAAATTGCCAGCATCCAGAGAGGGA...CTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAGAAACAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp AATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACCTAAATATCTCATATTaGATCTCCTTGATGCGCCCA +
Preference number: 4 (lower is better)
Translates to: NPRRSRRPLCQCPFTKQHLNISY*ISLMRP
Trigger: TGGGCGCATCAAGGAGATCCAATATGAGATATTTAG...GTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CCA 90 bp GTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAACTGGGGTTGAGCAAGTaGAGGTTTCCATTTAGGTCG +
Preference number: 4 (lower is better)
Translates to: VLRVYLRCVCLQSSVILELGLSK*RFPFRS
Trigger: CGACCTAAATGGAAACCTCCACTTGCTCAACCCCAG...TTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTGCTGAAAGTCGACGTTaGAGTCAAAGTAGATCTCAC +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVAESRR*SQSRSH
Trigger: GTGAGATCTACTTTGACTCCAACGTCGACTTTCAGC...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCAGGGACAAGAAGGCCTTaGCTTGCCTTGCCACTTGCT +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPGTRRP*LALPLA
Trigger: AGCAAGTGGCAAGGCAAGCCAAGGCCTTCTTGTCCC...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
3UTR CAA 72 bp GTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTaGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAAT +
Preference number: 4 (lower is better)
Translates to: VCLQSSVILEGS*ESPVWIVLQEN
Trigger: ATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
3UTR CAA 72 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTaGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTG +
Preference number: 4 (lower is better)
Translates to: YLRCVCLQSSVI*EGSLESPVWIV
Trigger: CACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
3UTR CAA 72 bp AATCCATTATTAAATCCCCGCCGAAGCAGACGTCCCTaGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAA +
Preference number: 4 (lower is better)
Translates to: NPLLNPRRSRRP*CQCPFTKQHGK
Trigger: TTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATTTAATAATGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR TCA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATTCCCTGTCCCTGTTTTaGATAGGAAATGCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYSLSLF*IGNACF
Trigger: AAAGCAGGCATTTCCTATTCAAAACAGGGACAGGGA...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CAAACTGCAATTTCTTTATGCGAGTCCATTTTTATGGCCATCATACTAAACAACCAGCTTCGTGCAGGCTaGCAGATCTCGCCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: QTAISLCESIFMAIILNNQLRAG*QISPAA
Trigger: GGCGGCAGGCGAGATCTGTCAGCCTGCACGAAGCTG...GTTGTTTAGTATGATGGCCATAAAAATGGACTCGCATAAAGAAATTGCAGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR TCA 90 bp TCTTTGTTTCTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCCGTCTTATCCCAGATaGACGTGTAGGCCAAGTTTG +
Preference number: 4 (lower is better)
Translates to: SLFLVCVACVSAMCLSAEPSYPR*TCRPSL
Trigger: CAAACTTGGCCTACACGTTCATCTGGGATAAGACGG...CTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAGAAACAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCACCTGACGGTTTTCAGTaGTCTGTAAAACTACGTTAT +
Preference number: 4 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKAPDGFQ*SVKLRY
Trigger: ATAACGTAGTTTTACAGATCACTGAAAACCGTCAGG...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATACTGGTGAGTACCGTTaGTGTCAAAGATGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHTGEYR*CQRCRA
Trigger: AGCTCTACATCTTTGACATCAACGGTACTCACCAGT...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp AAATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCAGTTTTGAATAGGAAATaGCTGCTTTCCAGTGGTACA +
Preference number: 4 (lower is better)
Translates to: KSPPKQTSLVPVSFYKAAVLNRK*LLSSGT
Trigger: TGTACCACTGGAAAGCAGGCATTTCCTATTCAAAAC...TGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR GCA 90 bp TTTCTTCCAAGTAGAAAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGACCACGACCCCCGCACTaGGGGTCAATGCACTGGGTC +
Preference number: 4 (lower is better)
Translates to: FLPSRKTSKNLTSFAVDGPRPPH*GSMHWV
Trigger: GACCCAGTGCATTGACCCGCAGTGCGGGGGTCGTGG...TCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTTTCTACTTGGAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR GCA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTTCAGTATTTCACAGTTaGTGCCACCCCAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: HFGRLFGESGLDCATGESSVFHS*CHPSLD
Trigger: ATCCAGGCTGGGGTGGCAGCAACTGTGAAATACTGA...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCCGTTTTGGTCCAGTGTaGATCTCCCATTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SFWKALWRVRFGLCYRRIRFGPV*ISHCCC
Trigger: GCAACAGCAATGGGAGATGCACACTGGACCAAAACG...GATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp GTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAAGAAGCGCCACCATTTaGCACCAAGTCAAACATTCC +
Preference number: 4 (lower is better)
Translates to: VLRVYLRCVCLQSSVILERSATI*HQVKHS
Trigger: GGAATGTTTGACTTGGTGGCAAATGGTGGCGCTTCT...TTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCCGTCAGCTTGACCATTaGAACTTGGGCATGAGATGC +
Preference number: 4 (lower is better)
Translates to: SFWKALWRVRFGLCYRRIRQLDH*NLGMRC
Trigger: GCATCTCATGCCCAAGTTGCAATGGTCAAGCTGACG...GATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TCTTTGTTTCTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGGGGGATTGTAGATGTTaGGGTAGTAGCCAATGGACC +
Preference number: 4 (lower is better)
Translates to: SLFLVCVACVSAMCLSAEGDCRC*GSSQWT
Trigger: GGTCCATTGGCTACTACCGCAACATCTACAATCCCC...CTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAGAAACAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TCTTTGTTTCTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGTCACTGTCCAGCCACTaGCTTTACTGTAGACTCGAG +
Preference number: 4 (lower is better)
Translates to: SLFLVCVACVSAMCLSAESLSSH*LYCRLE
Trigger: CTCGAGTCTACAGTAAAGGCAGTGGCTGGACAGTGA...CTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAGAAACAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCATGCCCCAAAGTCTCATaGCATGCTCAGGGGACATCA +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPCPKVS*HAQGTS
Trigger: TGATGTCCCCTGAGCATGCCATGAGACTTTGGGGCA...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGTTTCAAATCTGTTCCTaGAATTGTGGTTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: LESPVWIVLQENLHRGGPFQICS*NCGFFM
Trigger: CATGAAGAAACCACAATTCCAGGAACAGATTTGAAA...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAACGGTATGACGGCCTaGGTCATGGTAATCTTAAGA +
Preference number: 4 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYNGMTA*VMVILR
Trigger: TCTTAAGATTACCATGACCCAGGCCGTCATACCGTT...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATACGTTGACTTTGCCCTaGGCTTGTTCTTTTCGGAAT +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHTLTLP*ACSFRN
Trigger: ATTCCGAAAAGAACAAGCCCAGGGCAAAGTCAACGT...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCAAGATGTACTGCCGCTaGCTATGGAGCAGAAGAACC +
Preference number: 4 (lower is better)
Translates to: SFWKALWRVRFGLCYRRIKMYCR*LWSRRT
Trigger: GGTTCTTCTGCTCCATAGCCAGCGGCAGTACATCTT...GATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGTCCATAAAGCAGCCGTaGAGAATCATGATCGAAAGC +
Preference number: 4 (lower is better)
Translates to: YLRCVCLQSSVILEGSLESIKQP*RIMIES
Trigger: GCTTTCGATCATGATTCTTCACGGCTGCTTTATGGA...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAAAATGGCCAGGAGCACTaGGACCCCTACAGCACACAG +
Preference number: 4 (lower is better)
Translates to: FSFLILPVQLSAAICVCKNGQEH*DPYSTQ
Trigger: CTGTGTGCTGTAGGGGTCTCAGTGCTCCTGGCCATT...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCATGGATACACACCCCGTaGTTAGAACATCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPWIHTP*LEHPGS
Trigger: AGACCCTGGATGTTCTAATCACGGGGTGTGTATCCA...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATTCTCCTCTTTCTTCATaGCAAGGGTATCCATCACAT +
Preference number: 4 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYSPLSS*QGYPSH
Trigger: ATGTGATGGATACCCTTGTCATGAAGAAAGAGGAGA...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGGTAATCTTAAGAACTaGCTTGTACCCTGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: HFGRLFGESGLDCATGESGNLKN*LVPCRS
Trigger: AGAGCGGCAGGGTACAAGTCAGTTCTTAAGATTACC...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAAAGTTATCCATGGGGTTaGTCGCGAGGTCAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: FSFLILPVQLSAAICVCKSYPWG*SRGQWA
Trigger: GGCCCACTGACCTCGCGATCAACCCCATGGATAACT...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCACCATTCCATCCTCGCTaGAGCGGAAAATCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPPFHPR*SGKSVC
Trigger: ACAGACAGATTTTCCGCTTCAGCGAGGATGGAATGG...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTCCTTGATGCGCCCATaGGCATCAAAGTGCTTTGTA +
Preference number: 4 (lower is better)
Translates to: SFWKALWRVRFGLCYRRISLMRP*ASKCFV
Trigger: TACAAAGCACTTTGATGCTCATGGGCGCATCAAGGA...GATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCCATATTGGATCTCCTTaGTGCGCCCATGAGCATCAA +
Preference number: 4 (lower is better)
Translates to: SFWKALWRVRFGLCYRRIHIGSP*CAHEHQ
Trigger: TTGATGCTCATGGGCGCATCAAGGAGATCCAATATG...GATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGCATAGTACAGGGAGGTaGTTTCTGAACTGGAATGGT +
Preference number: 4 (lower is better)
Translates to: YLRCVCLQSSVILEGSLEHSTGR*FLNWNG
Trigger: ACCATTCCAGTTCAGAAATCACCTCCCTGTACTATG...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TCTTTGTTTCTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGTTTCCTTTTCCCGTCTaGTCTTGGTCAAGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SLFLVCVACVSAMCLSAEFPFPV*SWSRSS
Trigger: ACTGCTCCTTGACCAAGAGCAGACGGGAAAAGGAAA...CTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAGAAACAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTGTTTTGAATAGGAAATaGCTGCTTTCCAGTGGTACA +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVVLNRK*LLSSGT
Trigger: TGTACCACTGGAAAGCAGGCATTTCCTATTCAAAAC...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TCTTTGTTTCTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGATAAACAGAGCCAGATaGCATTGTGTATCCCGGGGT +
Preference number: 4 (lower is better)
Translates to: SLFLVCVACVSAMCLSAEINRAR*HCVSRG
Trigger: ACCCCGGGATACACAATGGCATCTGGCTCTGTTTAT...CTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAGAAACAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCACGGTGCACCTCCAGCTaGAGTACTTTGAAGACTTCT +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPRCTSS*STLKTS
Trigger: AGAAGTCTTCAAAGTACTGCAGCTGGAGGTGCACCG...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCGTGTCATTTTCCGTCTaGTGTAAGTGCCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SFWKALWRVRFGLCYRRIVSFSV*CKCQLR
Trigger: CCTCAACTGGCACTTACAGCAGACGGAAAATGACAC...GATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CAAACTGCAATTTCTTTATGCGAGTCCATTTTTATGGCCATCATACTAAACAACCTGACAGATCTCGCCTaGCGCCCGGCTCTTTCGGAC +
Preference number: 4 (lower is better)
Translates to: QTAISLCESIFMAIILNNLTDLA*RPALSD
Trigger: GTCCGAAAGAGCCGGGCGGCAGGCGAGATCTGTCAG...GTTGTTTAGTATGATGGCCATAAAAATGGACTCGCATAAAGAAATTGCAGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR GCA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATATCAGGGGACCAATTTaGCTGTATCTAATGGTGCAA +
Preference number: 4 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYIRGPI*LYLMVQ
Trigger: TTGCACCATTAGATACAGGCAAATTGGTCCCCTGAT...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTATTCAAAAATTTCAGTaGCCCTCTGACGCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: RVYLRCVCLQSSVILEGSIQKFQ*PSDAGN
Trigger: GTTTCCTGCGTCAGAGGGGCACTGAAATTTTTGAAT...AGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TCTTTGTTTCTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGATGCCTGCTTTCCAGTaGTACATTACTGCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: SLFLVCVACVSAMCLSAEMPAFQ*YITAKD
Trigger: GTCCTTGGCAGTAATGTACCACTGGAAAGCAGGCAT...CTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAGAAACAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTATGCCTGCTTTCCAGTaGTACATTACTGCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: HFGRLFGESGLDCATGESMPAFQ*YITAKD
Trigger: GTCCTTGGCAGTAATGTACCACTGGAAAGCAGGCAT...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp AATCAGGGTTTCCTTTGCTTATCAGTGACAAGGATTCTATTCGTCAGTTTTTCCTCTCCGTTCCATCCTTaGCTGCACTCGCACTTGCCG +
Preference number: 4 (lower is better)
Translates to: NQGFLCLSVTRILFVSFSSPFHP*LHSHLP
Trigger: CGGCAAGTGCGAGTGCAGCCAAGGATGGAACGGAGA...GGAAAAACTGACGAATAGAATCCTTGTCACTGATAAGCAAAGGAAACCCTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCAGGTCATAGAAGGACTTaGCAGCTTGCTGAGATGGTG +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPGHRRT*QLAEMV
Trigger: CACCATCTCAGCAAGCTGCCAAGTCCTTCTATGACC...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp AATCAGGGTTTCCTTTGCTTATCAGTGACAAGGATTCTATTCGTCAGTTTTTCCACACAGCAATGGCCGTaGCTGACTCCAGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: NQGFLCLSVTRILFVSFSTQQWP*LTPGWS
Trigger: AGACCACCCTGGAGTCAGCCACGGCCATTGCTGTGT...GGAAAAACTGACGAATAGAATCCTTGTCACTGATAAGCAAAGGAAACCCTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CCA 90 bp GTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGGAGCTCTTGATCAGTTaGAGAGGCAACTTCGTAAAA +
Preference number: 4 (lower is better)
Translates to: VACVSAMCLSAEQCHFGRELLIS*RGNFVK
Trigger: TTTTACGAAGTTGCCTCTCCAACTGATCAAGAGCTC...CCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATGAGCTCTTGATCAGTTaGAGAGGCAACTTCGTAAAA +
Preference number: 4 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYELLIS*RGNFVK
Trigger: TTTTACGAAGTTGCCTCTCCAACTGATCAAGAGCTC...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGTCAACCATATCACCTaGTTATCAGGAGACACCACC +
Preference number: 4 (lower is better)
Translates to: HFGRLFGESGLDCATGESVNHIT*LSGDTT
Trigger: GGTGGTGTCTCCTGATAACCAGGTGATATGGTTGAC...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTCTTTTCCGTCTTGGTaGTCCGATCAAAGTCCACTG +
Preference number: 4 (lower is better)
Translates to: SFWKALWRVRFGLCYRRISFPSW*SDQSPL
Trigger: CAGTGGACTTTGATCGGACCACCAAGACGGAAAAGA...GATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGATCTTTTCCGTCTTaGTGGTCCGATCAAAGTCCA +
Preference number: 4 (lower is better)
Translates to: YLRCVCLQSSVILEGSLERSFPS*WSDQSP
Trigger: TGGACTTTGATCGGACCACCAAGACGGAAAAGATCT...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAAATGGTCTGCATGGTGTaGCGAGCCACACTGGGCATG +
Preference number: 4 (lower is better)
Translates to: FSFLILPVQLSAAICVCKMVCMV*RATLGM
Trigger: CATGCCCAGTGTGGCTCGCCACACCATGCAGACCAT...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGAGATGTCATCAAACTaGTATAGATCAATGGGCAGT +
Preference number: 4 (lower is better)
Translates to: EGSLESPVWIVLQENLHREMSSN*YRSMGS
Trigger: ACTGCCCATTGATCTATACCAGTTTGATGACATCTC...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTGAGTCAGAAGCCCTTTaGAGCTGTATTCAAAAATTT +
Preference number: 4 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGESEAL*SCIQKF
Trigger: AAATTTTTGAATACAGCTCCAAAGGGCTTCTGACTC...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGTCTCTTTCTCCAAAGTaGATTAGTTTGGTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: YLRCVCLQSSVILEGSLESLSPK*ISLVSG
Trigger: CCCGCTCACCAAACTAATCCACTTTGGAGAAAGAGA...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCATAGCATTGTGCAGATaGAAGCCAAACGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: SFWKALWRVRFGLCYRRIIALCR*KPNVTS
Trigger: GCTGGTGACGTTTGGCTTCCATCTGCACAATGCTAT...GATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAATGCCGTTCACCACCGTaGTGGACTGAGACACGGTCA +
Preference number: 4 (lower is better)
Translates to: FSFLILPVQLSAAICVCKCRSPP*WTETRS
Trigger: TGACCGTGTCTCAGTCCACCACGGTGGTGAACGGCA...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp AAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCAATGGCGAGTTTGGTCTaGGTTTGGTCCCAGCACAGA +
Preference number: 4 (lower is better)
Translates to: KTSKNLTSFAVDGGQGEAMASLV*VWSQHR
Trigger: TCTGTGCTGGGACCAAACCCAGACCAAACTCGCCAT...TGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR TCA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGCCGTGAAGAATCATaGTCGAAAGCTTTCAAGGTT +
Preference number: 4 (lower is better)
Translates to: YLRCVCLQSSVILEGSLESREES*SKAFKV
Trigger: AACCTTGAAAGCTTTCGATCATGATTCTTCACGGCT...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp GTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAAGCCGTGAAGAATCATaGTCGAAAGCTTTCAAGGTT +
Preference number: 4 (lower is better)
Translates to: VLRVYLRCVCLQSSVILESREES*SKAFKV
Trigger: AACCTTGAAAGCTTTCGATCATGATTCTTCACGGCT...TTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGCCAGCTGCAGTACTTTaGAGACTTCTTGAATTTAAA +
Preference number: 4 (lower is better)
Translates to: GRLFGESGLDCATGESAQPAAVL*RLLEFK
Trigger: TTTAAATTCAAGAAGTCTTCAAAGTACTGCAGCTGG...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATTAAGAAACTGTGGCTaGTCAATAAAGAGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: SLVPVSFYKAARESSWVLLRNCG*SIKSCD
Trigger: ATCGCAGCTCTTTATTGATCAGCCACAGTTTCTTAA...TAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTCCTGACGGTTTTCAGTaGTCTGTAAAACTACGTTAT +
Preference number: 4 (lower is better)
Translates to: RVYLRCVCLQSSVILEGSPDGFQ*SVKLRY
Trigger: ATAACGTAGTTTTACAGATCACTGAAAACCGTCAGG...AGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTATAAAACCATCACTCTaGAGGTTTACTGTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: TSLVPVSFYKAARESSWVIKPSL*RFTVFR
Trigger: CCTGAAAACAGTAAACCTTCAGAGTGATGGTTTTAT...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp AAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCATTCATGGGTTCCGTCTGCTGTAAGTaGCAGTTGAGGCCAAATAGA +
Preference number: 4 (lower is better)
Translates to: KNLTSFAVDGGQGEAFMGSVCCK*QLRPNR
Trigger: TCTATTTGGCCTCAACTGGCACTTACAGCAGACGGA...ACCCATGAATGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR GCA 90 bp AAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCATTCATGGGTGTGTCATTTTCCGTCTaGTGTAAGTGCCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: KNLTSFAVDGGQGEAFMGVSFSV*CKCQLR
Trigger: CCTCAACTGGCACTTACAGCAGACGGAAAATGACAC...ACCCATGAATGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR GCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCAGGGAACCTCTTGAATTaGTCTCCGGCCAATATCAAG +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPGNLLN*SPANIK
Trigger: CTTGATATTGGCCGGAGAGCAATTCAAGAGGTTCCC...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGGTACACTCCGATCAATaGATCCTTCTGAAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: YLRCVCLQSSVILEGSLEVHSDQ*ILLKRD
Trigger: ATCTCTCTTCAGAAGGATGCATTGATCGGAGTGTAC...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATGACTTTCTGATTATATaGGTCCGTCTTATCCCAGAT +
Preference number: 4 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYDFLII*VRLIPD
Trigger: ATCTGGGATAAGACGGACGCATATAATCAGAAAGTC...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATGACTTTCTGATTATATaGGTCCGTCTTATCCCAGAT +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHDFLII*VRLIPD
Trigger: ATCTGGGATAAGACGGACGCATATAATCAGAAAGTC...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAACCCCTACGTATAGACTaGCGTCGATCCCACAGGCAA +
Preference number: 4 (lower is better)
Translates to: FSFLILPVQLSAAICVCKPLRID*RRSHRQ
Trigger: TTGCCTGTGGGATCGACGGCAGTCTATACGTAGGGG...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCCCGAATTTTCCAAACTaGTCGACTTTGCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: SFWKALWRVRFGLCYRRIPNFPN*STLPEM
Trigger: CATCTCTGGCAAAGTCGAGCAGTTTGGAAAATTCGG...GATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TCTTTGTTTCTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGTCACATCATGGATTTTaGTCGCGGGGTTGTTATTCC +
Preference number: 4 (lower is better)
Translates to: SLFLVCVACVSAMCLSAESHHGF*SRGCYS
Trigger: GGAATAACAACCCCGCGAGCAAAATCCATGATGTGA...CTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAGAAACAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TCAGGGTTTCCTTTGCTTATCAGTGACAAGGATTCTATTCGTCAGTTTTTCCCTTTTCCCGTCTGCTCTTaGTCAAGGAGCAGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: SGFPLLISDKDSIRQFFPFPVCS*SRSSKA
Trigger: GGCCTTACTGCTCCTTGACCAAGAGCAGACGGGAAA...AGGGAAAAACTGACGAATAGAATCCTTGTCACTGATAAGCAAAGGAAACCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CCA 90 bp CCAAGTAGAAAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGTGTTTCTAGGAAGTaGCCGGGTAGGCGGAGAATA +
Preference number: 4 (lower is better)
Translates to: PSRKTSKNLTSFAVDGGQGVSRK*PGRRRI
Trigger: TATTCTCCGCCTACCCGGCCACTTCCTAGAAACACC...CTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTTTCTACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR CCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCAAACCCGGGGAAACAATaGCAAGTTCCAGAAACACAC +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPNPGKQ*QVPETH
Trigger: GTGTGTTTCTGGAACTTGCCATTGTTTCCCCGGGTT...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAATACAGAGGGTCTCCATaGCTACGTCACAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: FSFLILPVQLSAAICVCKYRGSP*LRHSLL
Trigger: GAGCAGGCTGTGACGTAGCCATGGAGACCCTCTGTA...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TCTTTGTTTCTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCTGTTCCTGGAATTGTaGTTTCTTCATGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: SLFLVCVACVSAMCLSAELFLEL*FLHAGP
Trigger: AGGTCCTGCATGAAGAAACCACAATTCCAGGAACAG...CTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAGAAACAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TCTTTGTTTCTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGTTTCGTCACTTTTGGTaGCTAAAAGCCCACTGTTGC +
Preference number: 4 (lower is better)
Translates to: SLFLVCVACVSAMCLSAEFRHFW*LKAHCC
Trigger: GCAACAGTGGGCTTTTAGCCACCAAAAGTGACGAAA...CTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAGAAACAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATGAGATGTCATCAAACTaGTATAGATCAATGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHEMSSN*YRSMGS
Trigger: ACTGCCCATTGATCTATACCAGTTTGATGACATCTC...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCATCCATAAAGCAGCCGTaGAGAATCATGATCGAAAGC +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPSIKQP*RIMIES
Trigger: GCTTTCGATCATGATTCTTCACGGCTGCTTTATGGA...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAATTCCGTATCCGCATCTaGCCCTGCACTGATGGAGTA +
Preference number: 4 (lower is better)
Translates to: FSFLILPVQLSAAICVCKFRIRI*PCTDGV
Trigger: TACTCCATCAGTGCAGGGTCAGATGCGGATACGGAA...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp GTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAATTAAGAAACTGTGGCTaGTCAATAAAGAGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: VLRVYLRCVCLQSSVILELRNCG*SIKSCD
Trigger: ATCGCAGCTCTTTATTGATCAGCCACAGTTTCTTAA...TTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CCAAGTAGAAAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGTGGATACACACCCCGTaGTTAGAACATCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PSRKTSKNLTSFAVDGGQWIHTP*LEHPGS
Trigger: AGACCCTGGATGTTCTAATCACGGGGTGTGTATCCA...CTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTTTCTACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR TCA 90 bp CAAACTGCAATTTCTTTATGCGAGTCCATTTTTATGGCCATCATACTAAACAACGTAAGTCCCGTGGCCTaGGCACTGGTCTGCACACAT +
Preference number: 4 (lower is better)
Translates to: QTAISLCESIFMAIILNNVSPVA*ALVCTH
Trigger: ATGTGTGCAGACCAGTGCTCAGGCCACGGGACTTAC...GTTGTTTAGTATGATGGCCATAAAAATGGACTCGCATAAAGAAATTGCAGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR TCA 90 bp TCTTTGTTTCTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGTCTCCTCTTTCTTCATaGCAAGGGTATCCATCACAT +
Preference number: 4 (lower is better)
Translates to: SLFLVCVACVSAMCLSAESPLSS*QGYPSH
Trigger: ATGTGATGGATACCCTTGTCATGAAGAAAGAGGAGA...CTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAGAAACAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp GTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGTTTGATCAACCTTTCTaGTCATGGTTCCATCAACAA +
Preference number: 4 (lower is better)
Translates to: VACVSAMCLSAEQCHFGRFDQPF*SWFHQQ
Trigger: TTGTTGATGGAACCATGATCAGAAAGGTTGATCAAA...CCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGTCACACACTCCTAACTaGCTTAGGGTAAAATTCTGT +
Preference number: 4 (lower is better)
Translates to: YLRCVCLQSSVILEGSLESHTPN*LRVKFC
Trigger: ACAGAATTTTACCCTAAGGCAGTTAGGAGTGTGTGA...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CCAAGTAGAAAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGCGGTGCACCTCCAGCTaGAGTACTTTGAAGACTTCT +
Preference number: 4 (lower is better)
Translates to: PSRKTSKNLTSFAVDGGQRCTSS*STLKTS
Trigger: AGAAGTCTTCAAAGTACTGCAGCTGGAGGTGCACCG...CTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTTTCTACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR GCA 90 bp AAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCAGGGAACCTCTTGAATTaGTCTCCGGCCAATATCAAG +
Preference number: 4 (lower is better)
Translates to: KTSKNLTSFAVDGGQGEAGNLLN*SPANIK
Trigger: CTTGATATTGGCCGGAGAGCAATTCAAGAGGTTCCC...TGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR GCA 90 bp AGTAGAAAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGATCAGTATTTCACAGTTaGTGCCACCCCAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: SRKTSKNLTSFAVDGGQGSVFHS*CHPSLD
Trigger: ATCCAGGCTGGGGTGGCAGCAACTGTGAAATACTGA...TCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTTTCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR GCA 90 bp CCAAGTAGAAAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGCTACCAATTGTGCAGTaGTCTCCGTTCCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: PSRKTSKNLTSFAVDGGQLPIVQ*SPFHPW
Trigger: CCAAGGATGGAACGGAGAGCACTGCACAATTGGTAG...CTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTTTCTACTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR CCA 90 bp AAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCATTCATGGGTCGATACAGTGTTTGTTaGCACGGTGTCAGAATTCAC +
Preference number: 4 (lower is better)
Translates to: KNLTSFAVDGGQGEAFMGRYSVC*HGVRIH
Trigger: GTGAATTCTGACACCGTGCCAACAAACACTGTATCG...ACCCATGAATGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR CCA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATGAACTTAAGAAACTGTaGCTGATCAATAAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYELKKL*LINKEL
Trigger: CAGCTCTTTATTGATCAGCCACAGTTTCTTAAGTTC...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp CGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTGAACTTAAGAAACTGTaGCTGATCAATAAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: RVYLRCVCLQSSVILEGSELKKL*LINKEL
Trigger: CAGCTCTTTATTGATCAGCCACAGTTTCTTAAGTTC...AGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp AGTAGAAAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGACCAGAATCCAAGTACTaGATGAAGCCAGCTTCGTGC +
Preference number: 4 (lower is better)
Translates to: SRKTSKNLTSFAVDGGQGPESKY*MKPASC
Trigger: GCACGAAGCTGGCTTCATCCAGTACTTGGATTCTGG...TCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTTTCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR CCA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTTCAAACATTCCATCCTaGCGGGTAATGGTATATCCA +
Preference number: 4 (lower is better)
Translates to: HFGRLFGESGLDCATGESSNIPS*RVMVYP
Trigger: TGGATATACCATTACCCGCCAGGATGGAATGTTTGA...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TCTTTGTTTCTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGTCAAACATTCCATCCTaGCGGGTAATGGTATATCCA +
Preference number: 4 (lower is better)
Translates to: SLFLVCVACVSAMCLSAESNIPS*RVMVYP
Trigger: TGGATATACCATTACCCGCCAGGATGGAATGTTTGA...CTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAGAAACAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCAGTACTGAGTGAGGAATaGGGAACGCTCAAATACCAA +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPVLSEE*GTLKYQ
Trigger: TTGGTATTTGAGCGTTCCCCATTCCTCACTCAGTAC...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp AATCAGGGTTTCCTTTGCTTATCAGTGACAAGGATTCTATTCGTCAGTTTTTCCCATCTTCCTCTCTGCTaGATGACTCGATGTCCACCG +
Preference number: 4 (lower is better)
Translates to: NQGFLCLSVTRILFVSFSHLPLC*MTRCPP
Trigger: CGGTGGACATCGAGTCATCCAGCAGAGAGGAAGATG...GGAAAAACTGACGAATAGAATCCTTGTCACTGATAAGCAAAGGAAACCCTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CCA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATGAGTCAGAAGCCCTTTaGAGCTGTATTCAAAAATTT +
Preference number: 4 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYESEAL*SCIQKF
Trigger: AAATTTTTGAATACAGCTCCAAAGGGCTTCTGACTC...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCATCTCTTTCTCCAAAGTaGATTAGTTTGGTGAGCGGG +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPSLSPK*ISLVSG
Trigger: CCCGCTCACCAAACTAATCCACTTTGGAGAAAGAGA...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGCCAGCTGCAGTACTTTaGAGACTTCTTGAATTTAAA +
Preference number: 4 (lower is better)
Translates to: YLRCVCLQSSVILEGSLEPAAVL*RLLEFK
Trigger: TTTAAATTCAAGAAGTCTTCAAAGTACTGCAGCTGG...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAAATTTCAGTGCCCCTCTaGCGCAGGAAACCATCTTCA +
Preference number: 4 (lower is better)
Translates to: FSFLILPVQLSAAICVCKISVPL*RRKPSS
Trigger: TGAAGATGGTTTCCTGCGTCAGAGGGGCACTGAAAT...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp CAAACTGCAATTTCTTTATGCGAGTCCATTTTTATGGCCATCATACTAAACAACCACCCCAGCCTGGATTaGAGTGACATTCCCCATGGA +
Preference number: 4 (lower is better)
Translates to: QTAISLCESIFMAIILNNHPSLD*SDIPHG
Trigger: TCCATGGGGAATGTCACTGCAATCCAGGCTGGGGTG...GTTGTTTAGTATGATGGCCATAAAAATGGACTCGCATAAAGAAATTGCAGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR GCA 90 bp AATCAGGGTTTCCTTTGCTTATCAGTGACAAGGATTCTATTCGTCAGTTTTTCCTCAGTATTTCACAGTTaGTGCCACCCCAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: NQGFLCLSVTRILFVSFSSVFHS*CHPSLD
Trigger: ATCCAGGCTGGGGTGGCAGCAACTGTGAAATACTGA...GGAAAAACTGACGAATAGAATCCTTGTCACTGATAAGCAAAGGAAACCCTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CCA 90 bp AGTAGAAAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAAACCCGGGGAAACAATaGCAAGTTCCAGAAACACAC +
Preference number: 4 (lower is better)
Translates to: SRKTSKNLTSFAVDGGQGNPGKQ*QVPETH
Trigger: GTGTGTTTCTGGAACTTGCCATTGTTTCCCCGGGTT...TCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTTTCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR CCA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAAACCCGTTGGTGCCTATaGTCAACCATATCACCTGGT +
Preference number: 4 (lower is better)
Translates to: FSFLILPVQLSAAICVCKTRWCL*STISPG
Trigger: ACCAGGTGATATGGTTGACCATAGGCACCAACGGGT...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CAAACTGCAATTTCTTTATGCGAGTCCATTTTTATGGCCATCATACTAAACAACAATCCAAGTACTGGATaGAGCCAGCTTCGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: QTAISLCESIFMAIILNNNPSTG*SQLRAG
Trigger: GCCTGCACGAAGCTGGCTTCATCCAGTACTTGGATT...GTTGTTTAGTATGATGGCCATAAAAATGGACTCGCATAAAGAAATTGCAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR TCA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAATGTCAGTTACAGCGGTaGCGTCATTGTCATTGCTGT +
Preference number: 4 (lower is better)
Translates to: FSFLILPVQLSAAICVCKCQLQR*RHCHCC
Trigger: ACAGCAATGACAATGACGTCACCGCTGTAACTGACA...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCAAGTTGTACCGCCACATaGTCTTTTCGTTTAGGTAAA +
Preference number: 4 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPSCTAT*SFRLGK
Trigger: TTTACCTAAACGAAAAGATCATGTGGCGGTACAACT...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp AATCAGGGTTTCCTTTGCTTATCAGTGACAAGGATTCTATTCGTCAGTTTTTCCGTGTCATTTTCCGTCTaGTGTAAGTGCCAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: NQGFLCLSVTRILFVSFSVSFSV*CKCQLR
Trigger: CCTCAACTGGCACTTACAGCAGACGGAAAATGACAC...GGAAAAACTGACGAATAGAATCCTTGTCACTGATAAGCAAAGGAAACCCTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR GCA 90 bp AAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCAGTACACTCCGATCAATaGATCCTTCTGAAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: KTSKNLTSFAVDGGQGEAVHSDQ*ILLKRD
Trigger: ATCTCTCTTCAGAAGGATGCATTGATCGGAGTGTAC...TGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR CCA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAATCGTCGGCTTCTCTGTaGACCAAATCCTTTACTCTG +
Preference number: 4 (lower is better)
Translates to: FSFLILPVQLSAAICVCKSSASL*TKSFTL
Trigger: CAGAGTAAAGGATTTGGTCCACAGAGAAGCCGACGA...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp ACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCATTCCCAGCTGCAGTACTTTaGAGACTTCTTGAATTTAAA +
Preference number: 4 (lower is better)
Translates to: TSKNLTSFAVDGGQGEAFPAAVL*RLLEFK
Trigger: TTTAAATTCAAGAAGTCTTCAAAGTACTGCAGCTGG...GAATGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR TCA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAACATAGTACAGGGAGGTaGTTTCTGAACTGGAATGGT +
Preference number: 4 (lower is better)
Translates to: FSFLILPVQLSAAICVCKHSTGR*FLNWNG
Trigger: ACCATTCCAGTTCAGAAATCACCTCCCTGTACTATG...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR GCA 90 bp AATCAGGGTTTCCTTTGCTTATCAGTGACAAGGATTCTATTCGTCAGTTTTTCCTCACATCATGGATTTTaGTCGCGGGGTTGTTATTCC +
Preference number: 4 (lower is better)
Translates to: NQGFLCLSVTRILFVSFSSHHGF*SRGCYS
Trigger: GGAATAACAACCCCGCGAGCAAAATCCATGATGTGA...GGAAAAACTGACGAATAGAATCCTTGTCACTGATAAGCAAAGGAAACCCTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CCA 90 bp CAAACTGCAATTTCTTTATGCGAGTCCATTTTTATGGCCATCATACTAAACAACCACTCTCCATTTCCATaGCAATTTCGGGGGCATTCC +
Preference number: 4 (lower is better)
Translates to: QTAISLCESIFMAIILNNHSPFP*QFRGHS
Trigger: GGAATGCCCCCGAAATTGCCATGGAAATGGAGAGTG...GTTGTTTAGTATGATGGCCATAAAAATGGACTCGCATAAAGAAATTGCAGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR CCA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTTTTCAAATCTGTTCCTaGAATTGTGGTTTCTTCATG +
Preference number: 4 (lower is better)
Translates to: HFGRLFGESGLDCATGESFQICS*NCGFFM
Trigger: CATGAAGAAACCACAATTCCAGGAACAGATTTGAAA...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp AATCAGGGTTTCCTTTGCTTATCAGTGACAAGGATTCTATTCGTCAGTTTTTCCTTTCGTCACTTTTGGTaGCTAAAAGCCCACTGTTGC +
Preference number: 4 (lower is better)
Translates to: NQGFLCLSVTRILFVSFSFRHFW*LKAHCC
Trigger: GCAACAGTGGGCTTTTAGCCACCAAAAGTGACGAAA...GGAAAAACTGACGAATAGAATCCTTGTCACTGATAAGCAAAGGAAACCCTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CCA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAAGCTGAAAGTCGACGTTaGAGTCAAAGTAGATCTCAC +
Preference number: 4 (lower is better)
Translates to: FSFLILPVQLSAAICVCKAESRR*SQSRSH
Trigger: GTGAGATCTACTTTGACTCCAACGTCGACTTTCAGC...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR TCA 90 bp CCAAGTAGAAAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGTTAAGAAACTGTGGCTaGTCAATAAAGAGCTGCGAT +
Preference number: 4 (lower is better)
Translates to: PSRKTSKNLTSFAVDGGQLRNCG*SIKSCD
Trigger: ATCGCAGCTCTTTATTGATCAGCCACAGTTTCTTAA...CTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTTTCTACTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR TCA 90 bp AATCAGGGTTTCCTTTGCTTATCAGTGACAAGGATTCTATTCGTCAGTTTTTCCCCAGGAGAGTTGATATaGTTCCATTTTGATCAACCT +
Preference number: 4 (lower is better)
Translates to: NQGFLCLSVTRILFVSFSPGELI*FHFDQP
Trigger: AGGTTGATCAAAATGGAATCATATCAACTCTCCTGG...GGAAAAACTGACGAATAGAATCCTTGTCACTGATAAGCAAAGGAAACCCTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR TCA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAACCAGGAGAGTTGATATaGTTCCATTTTGATCAACCT +
Preference number: 4 (lower is better)
Translates to: FSFLILPVQLSAAICVCKPGELI*FHFDQP
Trigger: AGGTTGATCAAAATGGAATCATATCAACTCTCCTGG...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CCA 90 bp AGTAGAAAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAACTTAAGAAACTGTaGCTGATCAATAAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SRKTSKNLTSFAVDGGQGELKKL*LINKEL
Trigger: CAGCTCTTTATTGATCAGCCACAGTTTCTTAAGTTC...TCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTTTCTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR TCA 90 bp AATCAGGGTTTCCTTTGCTTATCAGTGACAAGGATTCTATTCGTCAGTTTTTCCATAAAACCATCACTCTaGAGGTTTACTGTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: NQGFLCLSVTRILFVSFSIKPSL*RFTVFR
Trigger: CCTGAAAACAGTAAACCTTCAGAGTGATGGTTTTAT...GGAAAAACTGACGAATAGAATCCTTGTCACTGATAAGCAAAGGAAACCCTGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS CCA 90 bp CTCGCCGTGGCCGTGCGGAGCGGAGCCCGGCGCTGCCAACTTGCCTaGGTCTGGAGCGGATCGCGTTACAGCGCCGGGCTCGGGGCTCCG +
Preference number: 5 (lower is better)
Translates to: LAVAVRSGARRCQLA*VWSGSRYSAGLGAP
Trigger: CGGAGCCCCGAGCCCGGCGCTGTAACGCGATCCGCTCCAGACCCAGGCAAGTTGGCAGCGCCGGGCTCCGCTCCGCACGGCCACGGCGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211976.2
CDS GCA 90 bp CCCTTGCCGATGAGCGACTTGACCGTGGCGAACCACAGCCACGACTaGTCGGCGCCAGCTTTGCGTCGGCTCACCTGCACCTCGGCCATC +
Preference number: 5 (lower is better)
Translates to: PLPMSDLTVANHSHD*SAPALRRLTCTSAI
Trigger: GATGGCCGAGGTGCAGGTGAGCCGACGCAAAGCTGGCGCCGAGCAGTCGTGGCTGTGGTTCGCCACGGTCAAGTCGCTCATCGGCAAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 90 bp AACCACAGCCACGACTGCTCGGCGCCAGCTTTGCGTCGGCTCACCTaGACCTCGGCCATCTTCCCCAGGGACAAGAAGGCCTTGGCTTGC +
Preference number: 5 (lower is better)
Translates to: NHSHDCSAPALRRLT*TSAIFPRDKKALAC
Trigger: GCAAGCCAAGGCCTTCTTGTCCCTGGGGAAGATGGCCGAGGTGCAGGTGAGCCGACGCAAAGCTGGCGCCGAGCAGTCGTGGCTGTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 90 bp GCGCGCCTTCTCCTCGTCCAGCGTCATGCCATAGCGCACATGCAGTaGCAGGGCACCGAACTGCATCTCCACGTCGGCGAACCTGCGAGT +
Preference number: 5 (lower is better)
Translates to: ARLLLVQRHAIAHMQ*QGTELHLHVGEPAS
Trigger: ACTCGCAGGTTCGCCGACGTGGAGATGCAGTTCGGTGCCCTGGCACTGCATGTGCGCTATGGCATGACGCTGGACGAGGAGAAGGCGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 90 bp GCTGCGCCGGGTGCTGCTTGTGGGATGGCGGCAAAGGCTGCAGGGTaGGTTGCCCTGGGTTGTTTGAAGGTTGCTCGCTCTCACTGTCCG +
Preference number: 5 (lower is better)
Translates to: AAPGAACGMAAKAAG*VALGCLKVARSHCP
Trigger: CGGACAGTGAGAGCGAGCAACCTTCAAACAACCCAGGGCAACCCACCCTGCAGCCTTTGCCGCCATCCCACAAGCAGCACCCGGCGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 90 bp GCCGGGTGCTGCTTGTGGGATGGCGGCAAAGGCTGCAGGGTGGGTTaGCCTGGGTTGTTTGAAGGTTGCTCGCTCTCACTGTCCGACCTG +
Preference number: 5 (lower is better)
Translates to: AGCCLWDGGKGCRVG*PGLFEGCSLSLSDL
Trigger: CAGGTCGGACAGTGAGAGCGAGCAACCTTCAAACAACCCAGGGCAACCCACCCTGCAGCCTTTGCCGCCATCCCACAAGCAGCACCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 90 bp GCCACCTTGATGCAGTCCTCGTTGGCGATGTTGAGCACGTTGGTCTaGACGCGGCCTTGGCTCACGGCCAGCATGACGCCCTTGCCGATG +
Preference number: 5 (lower is better)
Translates to: ATLMQSSLAMLSTLV*TRPWLTASMTPLPM
Trigger: CATCGGCAAGGGCGTCATGCTGGCCGTGAGCCAAGGCCGCGTGCAGACCAACGTGCTCAACATCGCCAACGAGGACTGCATCAAGGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 90 bp CAGTCCTCGTTGGCGATGTTGAGCACGTTGGTCTGCACGCGGCCTTaGCTCACGGCCAGCATGACGCCCTTGCCGATGAGCGACTTGACC +
Preference number: 5 (lower is better)
Translates to: QSSLAMLSTLVCTRP*LTASMTPLPMSDLT
Trigger: GGTCAAGTCGCTCATCGGCAAGGGCGTCATGCTGGCCGTGAGCCAAGGCCGCGTGCAGACCAACGTGCTCAACATCGCCAACGAGGACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 90 bp TTACAAGCGCAAGAGCCCATGATGCAAATCCCACGACCCCCGCACTaGGGGTCAATGCACTGGGTCGTCGGCACGTCACACTCGGTGCCC +
Preference number: 5 (lower is better)
Translates to: LQAQEPMMQIPRPPH*GSMHWVVGTSHSVP
Trigger: GGGCACCGAGTGTGACGTGCCGACGACCCAGTGCATTGACCCGCAGTGCGGGGGTCGTGGGATTTGCATCATGGGCTCTTGCGCTTGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000110346.9
ENSMUST00000190840.8
CDS TCA 90 bp CGTGATGTAAAGGACCCCGCTGTAGGACACAGCAATGGCCGTGGCTaGCTCCAGGGTGGTCTGAACCGCGTGCTTCCCCACCGGGTATTC +
Preference number: 5 (lower is better)
Translates to: RDVKDPAVGHSNGRG*LQGGLNRVLPHRVF
Trigger: GAATACCCGGTGGGGAAGCACGCGGTTCAGACCACCCTGGAGTCAGCCACGGCCATTGCTGTGTCCTACAGCGGGGTCCTTTACATCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 90 bp AAGTACTGGATGAAGCCAGCTTCGTGCAGGCTGACAGATCTCGCCTaGCGCCCGGCTCTTTCGGACTCCACCAGGTTCCGCTGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: KYWMKPASCRLTDLA*RPALSDSTRFRCSL
Trigger: GAGAGAGCAGCGGAACCTGGTGGAGTCCGAAAGAGCCGGGCGGCAGGCGAGATCTGTCAGCCTGCACGAAGCTGGCTTCATCCAGTACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000110346.9
ENSMUST00000190840.8
CDS GCA 90 bp GGGTTGTTTGAAGGTTGCTCGCTCTCACTGTCCGACCTGTTCTCGTaGTCCGTGTCTGTCAGGGTGAGGGCGGAGTTGGACCGGCTTGAC +
Preference number: 5 (lower is better)
Translates to: GLFEGCSLSLSDLFS*SVSVRVRAELDRLD
Trigger: GTCAAGCCGGTCCAACTCCGCCCTCACCCTGACAGACACGGAGCACGAGAACAGGTCGGACAGTGAGAGCGAGCAACCTTCAAACAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp AAATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCAGGTCTGCACGCGGCCTaGGCTCACGGCCAGCATGAC +
Preference number: 5 (lower is better)
Translates to: KSPPKQTSLVPVSFYKAAGLHAA*AHGQHD
Trigger: GTCATGCTGGCCGTGAGCCAAGGCCGCGTGCAGACC...TGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS CCA 90 bp GTGGTTTGCAGCTCGGCGGGCAAAGCAGCCGGCGGGGCCGGACTCTaGTTCCTTCTATTGGTCAGGGAGTTTCTATTGAGGGAAGTGATG +
Preference number: 5 (lower is better)
Translates to: VVCSSAGKAAGGAGL*FLLLVREFLLREVM
Trigger: CATCACTTCCCTCAATAGAAACTCCCTGACCAATAGAAGGAACCAGAGTCCGGCCCCGCCGGCTGCTTTGCCCGCCGAGCTGCAAACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp AAATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCAAGGGTGAGGGCGGAGTaGGACCGGCTTGACAGGCAG +
Preference number: 5 (lower is better)
Translates to: KSPPKQTSLVPVSFYKAARVRAE*DRLDRQ
Trigger: CTGCCTGTCAAGCCGGTCCAACTCCGCCCTCACCCT...TGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CAA 90 bp AAATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCAGGACTCGGGTGTGGTTaGCAGCTCGGCGGGCAAAGC +
Preference number: 5 (lower is better)
Translates to: KSPPKQTSLVPVSFYKAAGLGCG*QLGGQS
Trigger: GCTTTGCCCGCCGAGCTGCAAACCACACCCGAGTCC...TGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CAA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCATGGCTGCACTCGCACTaGCCGTCCTTGCACGTCCCG +
Preference number: 5 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKAWLHSH*PSLHVP
Trigger: CGGGACGTGCAAGGACGGCAAGTGCGAGTGCAGCCA...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp ATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGCGCTGCTGCTGGGGTaGAGCAAGTGGAGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: IPAEADVPCASVLLQSSTALLLG*SKWRFP
Trigger: TGGAAACCTCCACTTGCTCAACCCCAGCAGCAGCGC...CGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CAA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGTTGCCGATGAGCGACTaGACCGTGGCGAACCACAGC +
Preference number: 5 (lower is better)
Translates to: LESPVWIVLQENLHRGGPLPMSD*TVANHS
Trigger: GCTGTGGTTCGCCACGGTCAAGTCGCTCATCGGCAA...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 90 bp CTTCTATTGGTCAGGGAGTTTCTATTGAGGGAAGTGATGGACGGGTaGTGCTGCGCCGGGTGCTGCTTGTGGGATGGCGGCAAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: LLLVREFLLREVMDG*CCAGCCLWDGGKGC
Trigger: GCAGCCTTTGCCGCCATCCCACAAGCAGCACCCGGCGCAGCATCACCCGTCCATCACTTCCCTCAATAGAAACTCCCTGACCAATAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 90 bp CCACAGGCAAGCGCCACGGGTGCCAGGAGTTTGTTCCCGTCAGCTTaGCCATTGCAACTTGGGCATGAGATGCTACGCCTCCGACCATTA +
Preference number: 5 (lower is better)
Translates to: PQASATGARSLFPSA*PLQLGHEMLRLRPL
Trigger: TAATGGTCGGAGGCGTAGCATCTCATGCCCAAGTTGCAATGGTCAAGCTGACGGGAACAAACTCCTGGCACCCGTGGCGCTTGCCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 90 bp GATCTCGCCTGCCGCCCGGCTCTTTCGGACTCCACCAGGTTCCGCTaGTCTCTCGCAATTAACCTGCTACCATCCAGTAGTTCCACAAAG +
Preference number: 5 (lower is better)
Translates to: DLACRPALSDSTRFR*SLAINLLPSSSSTK
Trigger: CTTTGTGGAACTACTGGATGGTAGCAGGTTAATTGCGAGAGAGCAGCGGAACCTGGTGGAGTCCGAAAGAGCCGGGCGGCAGGCGAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000110346.9
ENSMUST00000190840.8
CDS CCA 90 bp CCAGGCCCTGAGCGGTCATGCTTTTCAGACACCCGTTGGTGCCTATaGTCAACCATATCACCTGGTTATCAGGAGACACCACCCGCACCG +
Preference number: 5 (lower is better)
Translates to: PGPERSCFSDTRWCL*STISPGYQETPPAP
Trigger: CGGTGCGGGTGGTGTCTCCTGATAACCAGGTGATATGGTTGACCATAGGCACCAACGGGTGTCTGAAAAGCATGACCGCTCAGGGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATGGTCTGCACGCGGCCTaGGCTCACGGCCAGCATGAC +
Preference number: 5 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYGLHAA*AHGQHD
Trigger: GTCATGCTGGCCGTGAGCCAAGGCCGCGTGCAGACC...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGAGCACCGCCGCCACCTaGATGCAGTCCTCGTTGGCG +
Preference number: 5 (lower is better)
Translates to: EGSLESPVWIVLQENLHRSTAAT*MQSSLA
Trigger: CGCCAACGAGGACTGCATCAAGGTGGCGGCGGTGCT...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAACCGTTCTCCAGGGCCTaGCGACCGCTCGTCAGCCGC +
Preference number: 5 (lower is better)
Translates to: VLRVYLRCVCLQSSVILEPFSRA*RPLVSR
Trigger: GCGGCTGACGAGCGGTCGCAAGGCCCTGGAGAACGG...TTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 90 bp CACCGGGAAGAGTCATGTTTCTTTTGGCTACTGTGGGATTCGCCGTaGCAGCCAGAACGTGGGGCTCTGTCTGGTAGTGAGAGTCCAGAC +
Preference number: 5 (lower is better)
Translates to: HREESCFFWLLWDSP*QPERGALSGSESPD
Trigger: GTCTGGACTCTCACTACCAGACAGAGCCCCACGTTCTGGCTGGCACGGCGAATCCCACAGTAGCCAAAAGAAACATGACTCTTCCCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 90 bp CGCCCATTGACCCTGAGCTTCCGGCCGAATACGTTGACTTTGCCCTaGGCTTGTTCTTTTCGGAATCTCCACTCCACCAGATTCTGCCCG +
Preference number: 5 (lower is better)
Translates to: RPLTLSFRPNTLTLP*ACSFRNLHSTRFCP
Trigger: CGGGCAGAATCTGGTGGAGTGGAGATTCCGAAAAGAACAAGCCCAGGGCAAAGTCAACGTATTCGGCCGGAAGCTCAGGGTCAATGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGGGACTCGGGTGTGGTTaGCAGCTCGGCGGGCAAAGC +
Preference number: 5 (lower is better)
Translates to: VACVSAMCLSAEQCHFGRGLGCG*QLGGQS
Trigger: GCTTTGCCCGCCGAGCTGCAAACCACACCCGAGTCC...CCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGCGGGGCCAGTCCAATTaGGGTCGCAAGTGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: GRLFGESGLDCATGESAQRGQSN*GRKCRS
Trigger: GCTCCTGCACTTGCGACCCAAATTGGACTGGCCCCG...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCACTCTCCGTTCCATCCTaGGCTGCACTCGCACTTGCC +
Preference number: 5 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKALSVPS*AALALA
Trigger: GGCAAGTGCGAGTGCAGCCAAGGATGGAACGGAGAG...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp ATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGTTCAGCATGAGCCCGTaGCTGCTGAAAACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: IPAEADVPCASVLLQSSTFSMSP*LLKTAS
Trigger: GCTGGCTGTTTTCAGCAGCAACGGGCTCATGCTGAA...CGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CAA 90 bp GTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGAGCACCGCCGCCACCTaGATGCAGTCCTCGTTGGCG +
Preference number: 5 (lower is better)
Translates to: VACVSAMCLSAEQCHFGRSTAAT*MQSSLA
Trigger: CGCCAACGAGGACTGCATCAAGGTGGCGGCGGTGCT...CCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 90 bp CACAGTTTTCTCCTTTGTATCCCGAGTTACAAGCGCAAGAGCCCATaGTGCAAATCCCACGACCCCCGCACTGCGGGTCAATGCACTGGG +
Preference number: 5 (lower is better)
Translates to: HSFLLCIPSYKRKSP*CKSHDPRTAGQCTG
Trigger: CCCAGTGCATTGACCCGCAGTGCGGGGGTCGTGGGATTTGCATCATGGGCTCTTGCGCTTGTAACTCGGGATACAAAGGAGAAAACTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000110346.9
ENSMUST00000190840.8
CDS TCA 90 bp TGGTCCCTCTCTGGATGCTGGCAATTTGACCGGTGGATGAGTAGGTaGCGTTCACTGCCATTAGCTTGCTACTCGGCAGCCAGAGAGTCG +
Preference number: 5 (lower is better)
Translates to: WSLSGCWQFDRWMSR*RSLPLACYSAARES
Trigger: CGACTCTCTGGCTGCCGAGTAGCAAGCTAATGGCAGTGAACGTCACCTACTCATCCACCGGTCAAATTGCCAGCATCCAGAGAGGGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 90 bp GTTTCTAGGAAGTGGCCGGGTAGGCGGAGAATAAACAGAGCCAGATaGCATTGTGTATCCCGGGGTTGCCGTACTGAACAGTGGCGTCGT +
Preference number: 5 (lower is better)
Translates to: VSRKWPGRRRINRAR*HCVSRGCRTEQWRR
Trigger: ACGACGCCACTGTTCAGTACGGCAACCCCGGGATACACAATGGCATCTGGCTCTGTTTATTCTCCGCCTACCCGGCCACTTCCTAGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
ENSMUST00000211976.2
CDS GCA 90 bp CCAGTTCCAGGCCCTGAGCGGTCATGCTTTTCAGACACCCGTTGGTaGCTATGGTCAACCATATCACCTGGTTATCAGGAGACACCACCC +
Preference number: 5 (lower is better)
Translates to: PVPGPERSCFSDTRW*LWSTISPGYQETPP
Trigger: GGGTGGTGTCTCCTGATAACCAGGTGATATGGTTGACCATAGGCACCAACGGGTGTCTGAAAAGCATGACCGCTCAGGGCCTGGAACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 90 bp GAGATACGATCCTCCCCTGGCTGTCATAGTCCACCTTTTCGCTCGTaGTCCCTCTCTGGATGCTGGCAATTTGACCGGTGGATGAGTAGG +
Preference number: 5 (lower is better)
Translates to: EIRSSPGCHSPPFRS*SLSGCWQFDRWMSR
Trigger: CCTACTCATCCACCGGTCAAATTGCCAGCATCCAGAGAGGGACCACGAGCGAAAAGGTGGACTATGACAGCCAGGGGAGGATCGTATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCGCGGCCCTTGGAGTATaGCCCGTTGCCACTACAGAG +
Preference number: 5 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESAALGV*PVATTE
Trigger: CTCTGTAGTGGCAACGGGCAATACTCCAAGGGCCGC...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTCGGGGCCAGTCCAATTaGGGTCGCAAGTGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: RVYLRCVCLQSSVILEGSRGQSN*GRKCRS
Trigger: GCTCCTGCACTTGCGACCCAAATTGGACTGGCCCCG...AGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCCTCTCCGTTCCATCCTaGGCTGCACTCGCACTTGCC +
Preference number: 5 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESLSVPS*AALALA
Trigger: GGCAAGTGCGAGTGCAGCCAAGGATGGAACGGAGAG...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGCAGTGCCAGCCGTTTaGGTCCAGTGTGCATCTCCC +
Preference number: 5 (lower is better)
Translates to: EGSLESPVWIVLQENLHRAVPAV*VQCASP
Trigger: GGGAGATGCACACTGGACCAAAACGGCTGGCACTGC...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGAGTTATCCATGGGGTaGATCGCGAGGTCAGTGGGC +
Preference number: 5 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKAELSMG*IARSVG
Trigger: GCCCACTGACCTCGCGATCAACCCCATGGATAACTC...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTGTAGCCGTCTCCGCTTaGGTAGCAGTCACAGTTGGC +
Preference number: 5 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGVAVSA*VAVTVG
Trigger: GCCAACTGTGACTGCTACCAAAGCGGAGACGGCTAC...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCACGGAGGGTGTTGCCATaGCTGTCAGTTACAGCGGTG +
Preference number: 5 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKARRVLP*LSVTAV
Trigger: CACCGCTGTAACTGACAGCAATGGCAACACCCTCCG...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp ATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGCGGATTCGGAGGGTGTaGCCATTGCTGTCAGTTACA +
Preference number: 5 (lower is better)
Translates to: IPAEADVPCASVLLQSSTRIRRV*PLLSVT
Trigger: TGTAACTGACAGCAATGGCAACACCCTCCGAATCCG...CGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CAA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGTCCACCGTGATAGCCTaGTCCATGTCCCCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: EGSLESPVWIVLQENLHRSTVIA*SMSPCR
Trigger: CCTGCACGGGGACATGGACAAGGCTATCACGGTGGA...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp AAATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCAAGGCCTTGGCTTGCCTaGCCACTTGCTGCTGAACTC +
Preference number: 5 (lower is better)
Translates to: KSPPKQTSLVPVSFYKAARPWLA*PLAAEL
Trigger: GAGTTCAGCAGCAAGTGGCAAGGCAAGCCAAGGCCT...TGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CAA 90 bp CGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAAGGCCTTGGCTTGCCTaGCCACTTGCTGCTGAACTC +
Preference number: 5 (lower is better)
Translates to: RSRRPLCQCPFTKQHGKARPWLA*PLAAEL
Trigger: GAGTTCAGCAGCAAGTGGCAAGGCAAGCCAAGGCCT...TGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCACCGTTCTCCAGGGCCTaGCGACCGCTCGTCAGCCGC +
Preference number: 5 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPPFSRA*RPLVSR
Trigger: GCGGCTGACGAGCGGTCGCAAGGCCCTGGAGAACGG...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 90 bp GGGACATCACTGCTTCGTTTTCCGTATCCGCATCTGACCCTGCACTaGTGGAGTAACCTCTGTGAGGGAGCCCCATTTCCGCACAGAATG +
Preference number: 5 (lower is better)
Translates to: GTSLLRFPYPHLTLH*WSNLCEGAPFPHRM
Trigger: CATTCTGTGCGGAAATGGGGCTCCCTCACAGAGGTTACTCCATCAGTGCAGGGTCAGATGCGGATACGGAAAACGAAGCAGTGATGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
ENSMUST00000211812.2
CDS CCA 90 bp TCCATGGGGTTGATCGCGAGGTCAGTGGGCCATTCCAGACGCACCTaGCTGATATGCATGCTAGTATCACAGGTTAAAGGTCGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: SMGLIARSVGHSRRT*LICMLVSQVKGRAD
Trigger: GTCAGCTCGACCTTTAACCTGTGATACTAGCATGCATATCAGCCAGGTGCGTCTGGAATGGCCCACTGACCTCGCGATCAACCCCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 90 bp TGGCATCTTTGGCGTAGCCGTCTCCGCTTTGGTAGCAGTCACAGTTaGCGTCGTTCTTGCAGTCACATTCCGAAGGTATCCCAGCCACTA +
Preference number: 5 (lower is better)
Translates to: WHLWRSRLRFGSSHS*RRSCSHIPKVSQPL
Trigger: TAGTGGCTGGGATACCTTCGGAATGTGACTGCAAGAACGACGCCAACTGTGACTGCTACCAAAGCGGAGACGGCTACGCCAAAGATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 90 bp ATGCTTTTCAGACACCCGTTGGTGCCTATGGTCAACCATATCACCTaGTTATCAGGAGACACCACCCGCACCGGCATCCGATTCGGATCC +
Preference number: 5 (lower is better)
Translates to: MLFRHPLVPMVNHIT*LSGDTTRTGIRFGS
Trigger: GGATCCGAATCGGATGCCGGTGCGGGTGGTGTCTCCTGATAACCAGGTGATATGGTTGACCATAGGCACCAACGGGTGTCTGAAAAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATCAGAGCCAGATGCCATaGTGTATCCCGGGGTTGCCG +
Preference number: 5 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHQSQMP*CIPGLP
Trigger: CGGCAACCCCGGGATACACAATGGCATCTGGCTCTG...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGGGGGAACCTCTTGAATaGCTCTCCGGCCAATATCAA +
Preference number: 5 (lower is better)
Translates to: LESPVWIVLQENLHRGGPGEPLE*LSGQYQ
Trigger: TTGATATTGGCCGGAGAGCAATTCAAGAGGTTCCCC...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTCCGGACAGGCTGCTCTaGAACAATCCGGACCTAGAA +
Preference number: 5 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGPDRLL*NNPDLE
Trigger: TTCTAGGTCCGGATTGTTCAAGAGCAGCCTGTCCGG...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATGCGGCCCTTGGAGTATaGCCCGTTGCCACTACAGAG +
Preference number: 5 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHAALGV*PVATTE
Trigger: CTCTGTAGTGGCAACGGGCAATACTCCAAGGGCCGC...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGCACAGGCAGCGGCCCTaGGAGTATTGCCCGTTGCCA +
Preference number: 5 (lower is better)
Translates to: YLRCVCLQSSVILEGSLEHRQRP*EYCPLP
Trigger: TGGCAACGGGCAATACTCCAAGGGCCGCTGCCTGTG...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TCTTTGTTTCTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGTGGCTGCACTCGCACTaGCCGTCCTTGCACGTCCCG +
Preference number: 5 (lower is better)
Translates to: SLFLVCVACVSAMCLSAEWLHSH*PSLHVP
Trigger: CGGGACGTGCAAGGACGGCAAGTGCGAGTGCAGCCA...CTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAGAAACAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGAGTGTGCATCTCCCATaGCTGTTGCACAAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: EGSLESPVWIVLQENLHRSVHLP*LLHKPG
Trigger: CCCCGGCTTGTGCAACAGCAATGGGAGATGCACACT...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGAGTGTGCATCTCCCATaGCTGTTGCACAAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: GRLFGESGLDCATGESAQSVHLP*LLHKPG
Trigger: CCCCGGCTTGTGCAACAGCAATGGGAGATGCACACT...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTAGCAGTGCCAGCCGTTTaGGTCCAGTGTGCATCTCCC +
Preference number: 5 (lower is better)
Translates to: SLVPVSFYKAARESSWVLAVPAV*VQCASP
Trigger: GGGAGATGCACACTGGACCAAAACGGCTGGCACTGC...TAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGGACGCAAGACTCTTATaGAACGGACTTTCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: LESPVWIVLQENLHRGGPDARLL*NGLSPG
Trigger: CCCTGGAGAAAGTCCGTTCAATAAGAGTCTTGCGTC...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGCTGACGTGAGGTCGTaGGAGCCCAGGAGAGTTGAT +
Preference number: 5 (lower is better)
Translates to: GRLFGESGLDCATGESAQADVRS*EPRRVD
Trigger: ATCAACTCTCCTGGGCTCCAACGACCTCACGTCAGC...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGCTGACGTGAGGTCGTaGGAGCCCAGGAGAGTTGAT +
Preference number: 5 (lower is better)
Translates to: EGSLESPVWIVLQENLHRADVRS*EPRRVD
Trigger: ATCAACTCTCCTGGGCTCCAACGACCTCACGTCAGC...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGCCAGTTTCGTCACTTTaGGTGGCTAAAAGCCCACTG +
Preference number: 5 (lower is better)
Translates to: LESPVWIVLQENLHRGGPPVSSL*VAKSPL
Trigger: CAGTGGGCTTTTAGCCACCAAAAGTGACGAAACTGG...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGTCCACCGTGATAGCCTaGTCCATGTCCCCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: VACVSAMCLSAEQCHFGRSTVIA*SMSPCR
Trigger: CCTGCACGGGGACATGGACAAGGCTATCACGGTGGA...CCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGCAAGAAGGCCTTGGCTaGCCTTGCCACTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GRLFGESGLDCATGESAQQEGLG*PCHLLL
Trigger: CAGCAGCAAGTGGCAAGGCAAGCCAAGGCCTTCTTG...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGCCAGCATGACGCCCTaGCCGATGAGCGACTTGACC +
Preference number: 5 (lower is better)
Translates to: VLRVYLRCVCLQSSVILEASMTP*PMSDLT
Trigger: GGTCAAGTCGCTCATCGGCAAGGGCGTCATGCTGGC...TTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGCGATGTTGAGCACGTaGGTCTGCACGCGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: VLRVYLRCVCLQSSVILEAMLST*VCTRPW
Trigger: CCAAGGCCGCGTGCAGACCAACGTGCTCAACATCGC...TTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 90 bp CTCGCAATTAACCTGCTACCATCCAGTAGTTCCACAAAGTCGTACTaGGTATGGGAAGGCGGTAAGCCCTTCCGGCCGTACACTCCGATC +
Preference number: 5 (lower is better)
Translates to: LAINLLPSSSSTKSY*VWEGGKPFRPYTPI
Trigger: GATCGGAGTGTACGGCCGGAAGGGCTTACCGCCTTCCCATACTCAGTACGACTTTGTGGAACTACTGGATGGTAGCAGGTTAATTGCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000110346.9
ENSMUST00000190840.8
CDS GCA 90 bp GTGATGGCGGACAGGCGGTCCCACATGTCGTATTCGAAGATGTACTaGCGCTGGCTATGGAGCAGAAGAACCATGGACTTTTCCAAGTAC +
Preference number: 5 (lower is better)
Translates to: VMADRRSHMSYSKMY*RWLWSRRTMDFSKY
Trigger: GTACTTGGAAAAGTCCATGGTTCTTCTGCTCCATAGCCAGCGGCAGTACATCTTCGAATACGACATGTGGGACCGCCTGTCCGCCATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 90 bp CACGTCTTCCCAGGCCGTCGTACCGATAGATCACTGTCCAGCCACTaGCTTTACTGTAGACTCGAGTCAGAAGCCCTTTGGAGCTGTATT +
Preference number: 5 (lower is better)
Translates to: HVFPGRRTDRSLSSH*LYCRLESEALWSCI
Trigger: AATACAGCTCCAAAGGGCTTCTGACTCGAGTCTACAGTAAAGGCAGTGGCTGGACAGTGATCTATCGGTACGACGGCCTGGGAAGACGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGCCGGACAGGCTGCTCTaGAACAATCCGGACCTAGAA +
Preference number: 5 (lower is better)
Translates to: GRLFGESGLDCATGESAQPDRLL*NNPDLE
Trigger: TTCTAGGTCCGGATTGTTCAAGAGCAGCCTGTCCGG...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTCACAGGCAGCGGCCCTaGGAGTATTGCCCGTTGCCA +
Preference number: 5 (lower is better)
Translates to: HFGRLFGESGLDCATGESHRQRP*EYCPLP
Trigger: TGGCAACGGGCAATACTCCAAGGGCCGCTGCCTGTG...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGACGTGTAGGCCAAGTTaGGCGAGGCAGGAAACCACT +
Preference number: 5 (lower is better)
Translates to: EGSLESPVWIVLQENLHRTCRPS*ARQETT
Trigger: AGTGGTTTCCTGCCTCGCCAAACTTGGCCTACACGT...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATCCACTGAGAGTAGGTaGCGCCCATTGACCCTGAGC +
Preference number: 5 (lower is better)
Translates to: SLVPVSFYKAARESSWVLSTESR*RPLTLS
Trigger: GCTCAGGGTCAATGGGCGCAACCTACTCTCAGTGGA...TAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp ATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGTCTGCCTTCTATACTaGAATAAGACCCTCCGACTC +
Preference number: 5 (lower is better)
Translates to: IPAEADVPCASVLLQSSTVCLLY*NKTLRL
Trigger: GAGTCGGAGGGTCTTATTCAAGTATAGAAGGCAGAC...CGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CAA 90 bp AAATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCATGTCCCAGGCTGGTTTaGCTAGAAACACGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: KSPPKQTSLVPVSFYKAACPRLV*LETRLP
Trigger: GGGAAGACGTGTTTCTAGCAAAACCAGCCTGGGACA...TGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CAA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCCAGCATGACGCCCTaGCCGATGAGCGACTTGACC +
Preference number: 5 (lower is better)
Translates to: HFGRLFGESGLDCATGESASMTP*PMSDLT
Trigger: GGTCAAGTCGCTCATCGGCAAGGGCGTCATGCTGGC...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATTCCTCGTTGGCGATGTaGAGCACGTTGGTCTGCACG +
Preference number: 5 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYSSLAM*STLVCT
Trigger: CGTGCAGACCAACGTGCTCAACATCGCCAACGAGGA...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCGCAAGAACTGGATGTaGTTGGCACTGTCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: TSLVPVSFYKAARESSWVRKNWM*LALSAS
Trigger: GCTGGCTGACAGTGCCAACAACATCCAGTTCTTGCG...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGCGGGGCAACCCTCAATaGTGCAGTGCTCTCCGTTCC +
Preference number: 5 (lower is better)
Translates to: YLRCVCLQSSVILEGSLERGNPQ*CSALRS
Trigger: GGAACGGAGAGCACTGCACAATTGAGGGTTGCCCCG...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000190840.8
CDS TCA 90 bp AAACACTTGTCACATTCCCAGACGGGAATATCCGCCGGACGTAATTaGAATCCCCTACGTATAGACTGCCGTCGATCCCACAGGCAAGCG +
Preference number: 5 (lower is better)
Translates to: KHLSHSQTGISAGRN*NPLRIDCRRSHRQA
Trigger: CGCTTGCCTGTGGGATCGACGGCAGTCTATACGTAGGGGATTTCAATTACGTCCGGCGGATATTCCCGTCTGGGAATGTGACAAGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 90 bp AAACCAGTTCCAGGCCCTGAGCGGTCATGCTTTTCAGACACCCGTTaGTGCCTATGGTCAACCATATCACCTGGTTATCAGGAGACACCA +
Preference number: 5 (lower is better)
Translates to: KPVPGPERSCFSDTR*CLWSTISPGYQETP
Trigger: TGGTGTCTCCTGATAACCAGGTGATATGGTTGACCATAGGCACCAACGGGTGTCTGAAAAGCATGACCGCTCAGGGCCTGGAACTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCCACTCCTCTTCGAGTaGCGGATTCACACACTCCTA +
Preference number: 5 (lower is better)
Translates to: TSLVPVSFYKAARESSWVPLLFE*RIHTLL
Trigger: TAGGAGTGTGTGAATCCGCAACTCGAAGAGGAGTGG...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TCTTTGTTTCTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGAGCCAGATGCCATaGTGTATCCCGGGGTTGCCG +
Preference number: 5 (lower is better)
Translates to: SLFLVCVACVSAMCLSAEQSQMP*CIPGLP
Trigger: CGGCAACCCCGGGATACACAATGGCATCTGGCTCTG...CTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAGAAACAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp AAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCATGGCTGCACTCGCACTaGCCGTCCTTGCACGTCCCG +
Preference number: 5 (lower is better)
Translates to: KTSKNLTSFAVDGGQGEAWLHSH*PSLHVP
Trigger: CGGGACGTGCAAGGACGGCAAGTGCGAGTGCAGCCA...TGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR CAA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTCCTTCGTTGTCTTaGCTGTCTGTACAGAGGGTC +
Preference number: 5 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGSPSLS*LSVQRV
Trigger: GACCCTCTGTACAGACAGCAAAGACAACGAAGGAGA...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTACGTGTAGGCCAAGTTaGGCGAGGCAGGAAACCACT +
Preference number: 5 (lower is better)
Translates to: RVYLRCVCLQSSVILEGSTCRPS*ARQETT
Trigger: AGTGGTTTCCTGCCTCGCCAAACTTGGCCTACACGT...AGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAAGGGAGGACGGCGCATaGAGTTTGGCATCTTTGGCG +
Preference number: 5 (lower is better)
Translates to: VLRVYLRCVCLQSSVILEREDGA*SLASLA
Trigger: CGCCAAAGATGCCAAACTCAATGCGCCGTCCTCCCT...TTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGCGGAGGGTGTTGCCATaGCTGTCAGTTACAGCGGTG +
Preference number: 5 (lower is better)
Translates to: YLRCVCLQSSVILEGSLERRVLP*LSVTAV
Trigger: CACCGCTGTAACTGACAGCAATGGCAACACCCTCCG...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGTTCACTGCCATTAGCTaGCTACTCGGCAGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: EGSLESPVWIVLQENLHRFTAIS*LLGSQR
Trigger: TCTCTGGCTGCCGAGTAGCAAGCTAATGGCAGTGAA...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATTCCCAGGAAAGCTGTTaGCAGAAGCAGCCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYSQESC*QKQPFL
Trigger: GAGGAAGGGCTGCTTCTGCAAACAGCTTTCCTGGGA...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTCCCAGGAAAGCTGTTaGCAGAAGCAGCCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: RVYLRCVCLQSSVILEGSSQESC*QKQPFL
Trigger: GAGGAAGGGCTGCTTCTGCAAACAGCTTTCCTGGGA...AGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGAATCAGGGGACCAATTaGCCTGTATCTAATGGTGCA +
Preference number: 5 (lower is better)
Translates to: LESPVWIVLQENLHRGGPNQGTN*PVSNGA
Trigger: TGCACCATTAGATACAGGCAAATTGGTCCCCTGATT...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGGTGGCCCGCCTAAATATCTCATATaGGATCTCCTTGATGCGCCC +
Preference number: 5 (lower is better)
Translates to: LESPVWIVLQENLHRGGPPKYLI*DLLDAP
Trigger: GGGCGCATCAAGGAGATCCAATATGAGATATTTAGG...CGGGCCACCCCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTTTGCCGATGAGCGACTaGACCGTGGCGAACCACAGC +
Preference number: 5 (lower is better)
Translates to: HFGRLFGESGLDCATGESLPMSD*TVANHS
Trigger: GCTGTGGTTCGCCACGGTCAAGTCGCTCATCGGCAA...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 90 bp GTCCAAGCACGACTCGTACTCGTATCCGACGGACACAACTGCCTCTaGCAAGCCGTAGACTTTCTGATTATATGCGTCCGTCTTATCCCA +
Preference number: 5 (lower is better)
Translates to: VQARLVLVSDGHNCL*QAVDFLIICVRLIP
Trigger: TGGGATAAGACGGACGCATATAATCAGAAAGTCTACGGCTTGTCAGAGGCAGTTGTGTCCGTCGGATACGAGTACGAGTCGTGCTTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 90 bp CTCTTTCGGACTCCACCAGGTTCCGCTGCTCTCTCGCAATTAACCTaGTACCATCCAGTAGTTCCACAAAGTCGTACTGAGTATGGGAAG +
Preference number: 5 (lower is better)
Translates to: LFRTPPGSAALSQLT*YHPVVPQSRTEYGK
Trigger: CTTCCCATACTCAGTACGACTTTGTGGAACTACTGGATGGTAGCAGGTTAATTGCGAGAGAGCAGCGGAACCTGGTGGAGTCCGAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000110346.9
ENSMUST00000190840.8
CDS GCA 90 bp TTGCCCTGGGCTTGTTCTTTTCGGAATCTCCACTCCACCAGATTCTaGCCGTTCTCACCGGGAAGAGTCATGTTTCTTTTGGCTACTGTG +
Preference number: 5 (lower is better)
Translates to: LPWACSFRNLHSTRF*PFSPGRVMFLLATV
Trigger: CACAGTAGCCAAAAGAAACATGACTCTTCCCGGTGAGAACGGGCAGAATCTGGTGGAGTGGAGATTCCGAAAAGAACAAGCCCAGGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGTGTCCGCGGACGAGTTaGTATAGCGCCTTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: EGSLESPVWIVLQENLHRCPRTS*YSAFPF
Trigger: AAAAGGAAAGGCGCTATACAAACTCGTCCGCGGACA...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTACCACTCCTCTTCGAGTaGCGGATTCACACACTCCTA +
Preference number: 5 (lower is better)
Translates to: SLVPVSFYKAARESSWVLPLLFE*RIHTLL
Trigger: TAGGAGTGTGTGAATCCGCAACTCGAAGAGGAGTGG...TAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp AATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACCTCTGGTTCCTTCTATaGGTCAGGGAGTTTCTATTG +
Preference number: 5 (lower is better)
Translates to: NPRRSRRPLCQCPFTKQHLWFLL*VREFLL
Trigger: CAATAGAAACTCCCTGACCAATAGAAGGAACCAGAG...GTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CAA 90 bp AAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCATTCATGGGTGCGGCCCTTGGAGTATaGCCCGTTGCCACTACAGAG +
Preference number: 5 (lower is better)
Translates to: KNLTSFAVDGGQGEAFMGAALGV*PVATTE
Trigger: CTCTGTAGTGGCAACGGGCAATACTCCAAGGGCCGC...ACCCATGAATGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR CAA 90 bp AAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCACACAGGCAGCGGCCCTaGGAGTATTGCCCGTTGCCA +
Preference number: 5 (lower is better)
Translates to: KTSKNLTSFAVDGGQGEAHRQRP*EYCPLP
Trigger: TGGCAACGGGCAATACTCCAAGGGCCGCTGCCTGTG...TGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR CAA 90 bp TCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATTCAGTATTTCACAGTaGCTGCCACCCCAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: SLVPVSFYKAARESSWVLFSISQ*LPPQPG
Trigger: TCCAGGCTGGGGTGGCAGCAACTGTGAAATACTGAA...TAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTTCTCCTTCGTTGTCTTaGCTGTCTGTACAGAGGGTC +
Preference number: 5 (lower is better)
Translates to: TSLVPVSFYKAARESSWVSPSLS*LSVQRV
Trigger: GACCCTCTGTACAGACAGCAAAGACAACGAAGGAGA...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGGACGCAAGACTCTTATaGAACGGACTTTCTCCAGGG +
Preference number: 5 (lower is better)
Translates to: EGSLESPVWIVLQENLHRDARLL*NGLSPG
Trigger: CCCTGGAGAAAGTCCGTTCAATAAGAGTCTTGCGTC...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp ATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGAATCTGTTCCTGGAATaGTGGTTTCTTCATGCAGGA +
Preference number: 5 (lower is better)
Translates to: IPAEADVPCASVLLQSSTNLFLE*WFLHAG
Trigger: TCCTGCATGAAGAAACCACAATTCCAGGAACAGATT...CGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CAA 90 bp GTAAAATCCATTATTAAATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCCTTGACCATTGCAACTaGGGCATGAGATGCTACGCC +
Preference number: 5 (lower is better)
Translates to: VKSIIKSPPKQTSLVPVSLDHCN*GMRCYA
Trigger: GGCGTAGCATCTCATGCCCAAGTTGCAATGGTCAAG...GGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATTTAATAATGGATTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CAA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATCTTGACCATTGCAACTaGGGCATGAGATGCTACGCC +
Preference number: 5 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHLDHCN*GMRCYA
Trigger: GGCGTAGCATCTCATGCCCAAGTTGCAATGGTCAAG...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTTTTGTTCCCGTCAGCTaGACCATTGCAACTTGGGCA +
Preference number: 5 (lower is better)
Translates to: TSLVPVSFYKAARESSWVFVPVS*TIATWA
Trigger: TGCCCAAGTTGCAATGGTCAAGCTGACGGGAACAAA...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGTTTGTTCCCGTCAGCTaGACCATTGCAACTTGGGCA +
Preference number: 5 (lower is better)
Translates to: EGSLESPVWIVLQENLHRFVPVS*TIATWA
Trigger: TGCCCAAGTTGCAATGGTCAAGCTGACGGGAACAAA...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCAGGGAGGACGGCGCATaGAGTTTGGCATCTTTGGCG +
Preference number: 5 (lower is better)
Translates to: SFWKALWRVRFGLCYRRIREDGA*SLASLA
Trigger: CGCCAAAGATGCCAAACTCAATGCGCCGTCCTCCCT...GATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp AATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACAGAGCTCTTGATCAGTaGGAGAGGCAACTTCGTAAA +
Preference number: 5 (lower is better)
Translates to: NPRRSRRPLCQCPFTKQHRALDQ*ERQLRK
Trigger: TTTACGAAGTTGCCTCTCCAACTGATCAAGAGCTCT...GTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CAA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATCGGATTCGGAGGGTGTaGCCATTGCTGTCAGTTACA +
Preference number: 5 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHRIRRV*PLLSVT
Trigger: TGTAACTGACAGCAATGGCAACACCCTCCGAATCCG...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGCCAGTTTCGTCACTTTaGGTGGCTAAAAGCCCACTG +
Preference number: 5 (lower is better)
Translates to: EGSLESPVWIVLQENLHRPVSSL*VAKSPL
Trigger: CAGTGGGCTTTTAGCCACCAAAAGTGACGAAACTGG...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTAGAGTCATGTTTCTTTaGGCTACTGTGGGATTCGCC +
Preference number: 5 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGRVMFL*ATVGFA
Trigger: GGCGAATCCCACAGTAGCCAAAAGAAACATGACTCT...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTTCCACTGAGAGTAGGTaGCGCCCATTGACCCTGAGC +
Preference number: 5 (lower is better)
Translates to: HFGRLFGESGLDCATGESSTESR*RPLTLS
Trigger: GCTCAGGGTCAATGGGCGCAACCTACTCTCAGTGGA...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTGAGCATCAAAGTGCTTaGTATAAGTCATCACGGCCG +
Preference number: 5 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGEHQSA*YKSSRP
Trigger: CGGCCGTGATGACTTATACAAAGCACTTTGATGCTC...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCAGCGCTGCTGCTGGGGTaGAGCAAGTGGAGGTTTCCA +
Preference number: 5 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPALLLG*SKWRFP
Trigger: TGGAAACCTCCACTTGCTCAACCCCAGCAGCAGCGC...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTCAAGAAGGCCTTGGCTaGCCTTGCCACTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: HFGRLFGESGLDCATGESQEGLG*PCHLLL
Trigger: CAGCAGCAAGTGGCAAGGCAAGCCAAGGCCTTCTTG...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTCTTGCCGATCTCACTTaGTCGCAAGAACTGGATGTT +
Preference number: 5 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGLADLT*SQELDV
Trigger: AACATCCAGTTCTTGCGACAAAGTGAGATCGGCAAG...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 90 bp CCCTGCCGCTCTGGAACTCAGGTAGGAAAGTTTCAAATCTGTTCCTaGAATTGTGGTTTCTTCATGCAGGACCTGTGTCTCGGGGATGAT +
Preference number: 5 (lower is better)
Translates to: PCRSGTQVGKFQICS*NCGFFMQDLCLGDD
Trigger: ATCATCCCCGAGACACAGGTCCTGCATGAAGAAACCACAATTCCAGGAACAGATTTGAAACTTTCCTACCTGAGTTCCAGAGCGGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGGTCAGGGAGTTTCTATaGAGGGAAGTGATGGACGGG +
Preference number: 5 (lower is better)
Translates to: YLRCVCLQSSVILEGSLEVREFL*REVMDG
Trigger: CCCGTCCATCACTTCCCTCAATAGAAACTCCCTGAC...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAATTCAGTATTTCACAGTaGCTGCCACCCCAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: VLRVYLRCVCLQSSVILEFSISQ*LPPQPG
Trigger: TCCAGGCTGGGGTGGCAGCAACTGTGAAATACTGAA...TTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATCCAAATAGTGAGCAATaGTGCAGTGCTCTCCGTTCC +
Preference number: 5 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYPNSEQ*CSALRS
Trigger: GGAACGGAGAGCACTGCACAATTGCTCACTATTTGG...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CAA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCAGTAGCCGTCTCCGCTTaGGTAGCAGTCACAGTTGGC +
Preference number: 5 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPVAVSA*VAVTVG
Trigger: GCCAACTGTGACTGCTACCAAAGCGGAGACGGCTAC...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTAAAGATGTAGAGCTCTaGATCAGTTGGAGAGGCAAC +
Preference number: 5 (lower is better)
Translates to: DVPCASVLLQSSTGKQLGKDVEL*ISWRGN
Trigger: GTTGCCTCTCCAACTGATCAAGAGCTCTACATCTTT...ACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGAGAGTCATGTTTCTTTaGGCTACTGTGGGATTCGCC +
Preference number: 5 (lower is better)
Translates to: GRLFGESGLDCATGESAQRVMFL*ATVGFA
Trigger: GGCGAATCCCACAGTAGCCAAAAGAAACATGACTCT...CTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATGACTTTGCCCTGGGCTaGTTCTTTTCGGAATCTCCA +
Preference number: 5 (lower is better)
Translates to: PLCQCPFTKQHGKAVGFYDFALG*FFSESP
Trigger: TGGAGATTCCGAAAAGAACAAGCCCAGGGCAAAGTC...ATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCGTCTGCCTTCTATACTaGAATAAGACCCTCCGACTC +
Preference number: 5 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESVCLLY*NKTLRL
Trigger: GAGTCGGAGGGTCTTATTCAAGTATAGAAGGCAGAC...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTTTCAGCATGAGCCCGTaGCTGCTGAAAACAGCCAGC +
Preference number: 5 (lower is better)
Translates to: HFGRLFGESGLDCATGESFSMSP*LLKTAS
Trigger: GCTGGCTGTTTTCAGCAGCAACGGGCTCATGCTGAA...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAATTGATGCAGTCCTCGTaGGCGATGTTGAGCACGTTG +
Preference number: 5 (lower is better)
Translates to: VLRVYLRCVCLQSSVILELMQSS*AMLSTL
Trigger: CAACGTGCTCAACATCGCCAACGAGGACTGCATCAA...TTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 90 bp GACACGTTGACGCCAATAAGTGGGGTTCCATCAGCTGTTAGTACTTaGCCTCTGATGACGGACGCAAGACTCTTATTGAACGGACTTTCT +
Preference number: 5 (lower is better)
Translates to: DTLTPISGVPSAVST*PLMTDARLLLNGLS
Trigger: AGAAAGTCCGTTCAATAAGAGTCTTGCGTCCGTCATCAGAGGCCAAGTACTAACAGCTGATGGAACCCCACTTATTGGCGTCAACGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGTCAGGGAGTTTCTATaGAGGGAAGTGATGGACGGG +
Preference number: 5 (lower is better)
Translates to: HFGRLFGESGLDCATGESVREFL*REVMDG
Trigger: CCCGTCCATCACTTCCCTCAATAGAAACTCCCTGAC...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTGTCCCTGTCCCTGTTTaGAATAGGAAATGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: RVYLRCVCLQSSVILEGSVPVPV*NRKCLL
Trigger: AAGCAGGCATTTCCTATTCAAAACAGGGACAGGGAC...AGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp AGTAGAAAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGACTCTCCGTTCCATCCTaGGCTGCACTCGCACTTGCC +
Preference number: 5 (lower is better)
Translates to: SRKTSKNLTSFAVDGGQGLSVPS*AALALA
Trigger: GGCAAGTGCGAGTGCAGCCAAGGATGGAACGGAGAG...TCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTTTCTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR CAA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTGGTGTCTGAAGGCTTaGGCTAATGATATCCTGAGG +
Preference number: 5 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHWCLKA*ANDILR
Trigger: CCTCAGGATATCATTAGCCAAAGCCTTCAGACACCA...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGAGAAGCGCCACCATTaGCCACCAAGTCAAACATTC +
Preference number: 5 (lower is better)
Translates to: VLRVYLRCVCLQSSVILEEKRHH*PPSQTF
Trigger: GAATGTTTGACTTGGTGGCAAATGGTGGCGCTTCTC...TTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGGTCCGTTCTTATCGATaGCCATTCCTTTGGGACTCA +
Preference number: 5 (lower is better)
Translates to: VACVSAMCLSAEQCHFGRVRSYR*PFLWDS
Trigger: TGAGTCCCAAAGGAATGGCAATCGATAAGAACGGAC...CCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTAGAGCTCTTGATCAGTaGGAGAGGCAACTTCGTAAA +
Preference number: 5 (lower is better)
Translates to: TSLVPVSFYKAARESSWVRALDQ*ERQLRK
Trigger: TTTACGAAGTTGCCTCTCCAACTGATCAAGAGCTCT...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCCCTAAATATCTCATATaGGATCTCCTTGATGCGCCC +
Preference number: 5 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESPKYLI*DLLDAP
Trigger: GGGCGCATCAAGGAGATCCAATATGAGATATTTAGG...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGTCCCAGGCTGGTTTaGCTAGAAACACGTCTTCCC +
Preference number: 5 (lower is better)
Translates to: SFWKALWRVRFGLCYRRICPRLV*LETRLP
Trigger: GGGAAGACGTGTTTCTAGCAAAACCAGCCTGGGACA...GATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATCCAAAGTGGATTAGTTaGGTGAGCGGGTCATACAAG +
Preference number: 5 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHPKWIS*VSGSYK
Trigger: CTTGTATGACCCGCTCACCAAACTAATCCACTTTGG...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp ACGTCCCTTGTGCCAGTGTCCTTTTACAAAGCAGCACGGGAAAGCAGTTGGGTTTTCACATCATGGATTTaGCTCGCGGGGTTGTTATTC +
Preference number: 5 (lower is better)
Translates to: TSLVPVSFYKAARESSWVFTSWI*LAGLLF
Trigger: GAATAACAACCCCGCGAGCAAAATCCATGATGTGAA...AACCCAACTGCTTTCCCGTGCTGCTTTGTAAAAGGACACTGGCACAAGGGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCAATCCAGGAATAGCATaGTGCAGATGGAAGCCAAAC +
Preference number: 5 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESNPGIA*CRWKPN
Trigger: GTTTGGCTTCCATCTGCACAATGCTATTCCTGGATT...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp AATCAGGGTTTCCTTTGCTTATCAGTGACAAGGATTCTATTCGTCAGTTTTTCCGCGATGTTGAGCACGTaGGTCTGCACGCGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: NQGFLCLSVTRILFVSFSAMLST*VCTRPW
Trigger: CCAAGGCCGCGTGCAGACCAACGTGCTCAACATCGC...GGAAAAACTGACGAATAGAATCCTTGTCACTGATAAGCAAAGGAAACCCTGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CAA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTTTGATGCAGTCCTCGTaGGCGATGTTGAGCACGTTG +
Preference number: 5 (lower is better)
Translates to: HFGRLFGESGLDCATGESLMQSS*AMLSTL
Trigger: CAACGTGCTCAACATCGCCAACGAGGACTGCATCAA...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp AAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCATTCATGGGTTGGTTGGCCTACCAATaGTGCAGTGCTCTCCGTTCC +
Preference number: 5 (lower is better)
Translates to: KNLTSFAVDGGQGEAFMGWLAYQ*CSALRS
Trigger: GGAACGGAGAGCACTGCACAATTGGTAGGCCAACCA...ACCCATGAATGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS TCA 90 bp TCACATAAAAGACATTCCAGGGAATCCACACAGTGTGGTACTGAGTaGGGAATGGGGAACGCTCAAATACCAAAGTCAGAGAAGCGCCAC +
Preference number: 5 (lower is better)
Translates to: SHKRHSRESTQCGTE*GMGNAQIPKSEKRH
Trigger: GTGGCGCTTCTCTGACTTTGGTATTTGAGCGTTCCCCATTCCTCACTCAGTACCACACTGTGTGGATTCCCTGGAATGTCTTTTATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 90 bp CAGAATGCCACTCCTCTTCGAGTTGCGGATTCACACACTCCTAACTaGCTTAGGGTAAAATTCTGTCCTTGTCTAGTATACTCGTCGGCT +
Preference number: 5 (lower is better)
Translates to: QNATPLRVADSHTPN*LRVKFCPCLVYSSA
Trigger: AGCCGACGAGTATACTAGACAAGGACAGAATTTTACCCTAAGGCAGTTAGGAGTGTGTGAATCCGCAACTCGAAGAGGAGTGGCATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
ENSMUST00000211812.2
CDS CCA 90 bp CATACAAGCCCCCGTGGAATCCAATTACCAGCTGAAAGTCGACGTTaGAGTCAAAGTAGATCTCACCATAGGCAGTGTACTGGATCTGTT +
Preference number: 5 (lower is better)
Translates to: HTSPRGIQLPAESRR*SQSRSHHRQCTGSV
Trigger: AACAGATCCAGTACACTGCCTATGGTGAGATCTACTTTGACTCCAACGTCGACTTTCAGCTGGTAATTGGATTCCACGGGGGCTTGTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTTGTCCGCGGACGAGTTaGTATAGCGCCTTTCCTTTT +
Preference number: 5 (lower is better)
Translates to: HFGRLFGESGLDCATGESCPRTS*YSAFPF
Trigger: AAAAGGAAAGGCGCTATACAAACTCGTCCGCGGACA...AGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATACGATACAGTGTTTGTaGGCACGGTGTCAGAATTCA +
Preference number: 5 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHTIQCL*ARCQNS
Trigger: TGAATTCTGACACCGTGCCAACAAACACTGTATCGT...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCGGGGAACCTCTTGAATaGCTCTCCGGCCAATATCAA +
Preference number: 5 (lower is better)
Translates to: SFWKALWRVRFGLCYRRIGEPLE*LSGQYQ
Trigger: TTGATATTGGCCGGAGAGCAATTCAAGAGGTTCCCC...GATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCTGCACAGGTTAGTTCTAAAACACTaGTCACATTCCCAGACGGGA +
Preference number: 5 (lower is better)
Translates to: EGSLESPVWIVLQENLHRLVLKH*SHSQTG
Trigger: TCCCGTCTGGGAATGTGACAAGTGTTTTAGAACTAA...CCTGTGCAGATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGTCCGTTCTTATCGATaGCCATTCCTTTGGGACTCA +
Preference number: 5 (lower is better)
Translates to: VLRVYLRCVCLQSSVILEVRSYR*PFLWDS
Trigger: TGAGTCCCAAAGGAATGGCAATCGATAAGAACGGAC...TTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCGCGTATTTGGTAGTGTaGGCAAAAGGCCCAATTTTA +
Preference number: 5 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESAYLVV*AKGPIL
Trigger: TAAAATTGGGCCTTTTGCCAACACTACCAAATACGC...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGTACTCGTACGCGTATTaGGTAGTGTTGGCAAAAGGC +
Preference number: 5 (lower is better)
Translates to: YLRCVCLQSSVILEGSLEYSYAY*VVLAKG
Trigger: GCCTTTTGCCAACACTACCAAATACGCGTACGAGTA...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GTAAAATCCATTATTAAATCCCCGCCGAAGCAGACGTCCCTTGTGCCAGTGTCCCACATCTTCCCACTGTaGACTCTTCACAAGCTCATA +
Preference number: 5 (lower is better)
Translates to: VKSIIKSPPKQTSLVPVSHIFPL*TLHKLI
Trigger: TATGAGCTTGTGAAGAGTCAACAGTGGGAAGATGTG...GGACACTGGCACAAGGGACGTCTGCTTCGGCGGGGATTTAATAATGGATTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CAA 90 bp TCAGGGTTTCCTTTGCTTATCAGTGACAAGGATTCTATTCGTCAGTTTTTCCCTTCCTCGTTGGCGATGTaGAGCACGTTGGTCTGCACG +
Preference number: 5 (lower is better)
Translates to: SGFPLLISDKDSIRQFFPSSLAM*STLVCT
Trigger: CGTGCAGACCAACGTGCTCAACATCGCCAACGAGGA...AGGGAAAAACTGACGAATAGAATCCTTGTCACTGATAAGCAAAGGAAACCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS TCA 90 bp CCGCCAAAATGTCATAATCTCTTTCTCCAAAGTGGATTAGTTTGGTaGGCGGGTCATACAAGCCCCCGTGGAATCCAATTACCAGCTGAA +
Preference number: 5 (lower is better)
Translates to: PPKCHNLFLQSGLVW*AGHTSPRGIQLPAE
Trigger: TTCAGCTGGTAATTGGATTCCACGGGGGCTTGTATGACCCGCTCACCAAACTAATCCACTTTGGAGAAAGAGATTATGACATTTTGGCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 90 bp AAAGCAGCCGTGAAGAATCATGATCGAAAGCTTTCAAGGTTTCACTaGAACTATAGGACTTCTGCGTGGGGACCCTACACTCCTCATTGT +
Preference number: 5 (lower is better)
Translates to: KAAVKNHDRKLSRFH*NYRTSAWGPYTPHC
Trigger: ACAATGAGGAGTGTAGGGTCCCCACGCAGAAGTCCTATAGTTCCAGTGAAACCTTGAAAGCTTTCGATCATGATTCTTCACGGCTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
ENSMUST00000211812.2
CDS CCA 90 bp GAGCAGGGTCCTTTCCGATCCTTTTCCAGATTTCAATGTCCGGTGTaGTCCATCTTCCCGCCAAAATGTCATAATCTCTTTCTCCAAAGT +
Preference number: 5 (lower is better)
Translates to: EQGPFRSFSRFQCPV*SIFPPKCHNLFLQS
Trigger: ACTTTGGAGAAAGAGATTATGACATTTTGGCGGGAAGATGGACCACACCGGACATTGAAATCTGGAAAAGGATCGGAAAGGACCCTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCGTCCCTGTCCCTGTTTaGAATAGGAAATGCCTGCTT +
Preference number: 5 (lower is better)
Translates to: SFWKALWRVRFGLCYRRIVPVPV*NRKCLL
Trigger: AAGCAGGCATTTCCTATTCAAAACAGGGACAGGGAC...GATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TTTCTTCCAAGTAGAAAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGACGGGGCCAGTCCAATTaGGGTCGCAAGTGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: FLPSRKTSKNLTSFAVDGRGQSN*GRKCRS
Trigger: GCTCCTGCACTTGCGACCCAAATTGGACTGGCCCCG...TCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTTTCTACTTGGAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR CAA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATAATCTGTTCCTGGAATaGTGGTTTCTTCATGCAGGA +
Preference number: 5 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHNLFLE*WFLHAG
Trigger: TCCTGCATGAAGAAACCACAATTCCAGGAACAGATT...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp AATCAGGGTTTCCTTTGCTTATCAGTGACAAGGATTCTATTCGTCAGTTTTTCCGAGTTATCCATGGGGTaGATCGCGAGGTCAGTGGGC +
Preference number: 5 (lower is better)
Translates to: NQGFLCLSVTRILFVSFSELSMG*IARSVG
Trigger: GCCCACTGACCTCGCGATCAACCCCATGGATAACTC...GGAAAAACTGACGAATAGAATCCTTGTCACTGATAAGCAAAGGAAACCCTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS-3UTR CAA 90 bp GCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAGTCCATTTTAATCTCTCTCTaGGTTACCCGGCCCATATTA +
Preference number: 5 (lower is better)
Translates to: AMCLSAEQCHFGRLFGESILISL*VTRPIL
Trigger: TAATATGGGCCGGGTAACCAAGAGAGAGATTAAAAT...GGACTCTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATGCGTATTTGGTAGTGTaGGCAAAAGGCCCAATTTTA +
Preference number: 5 (lower is better)
Translates to: LVCVACVSAMCLSAEQCHAYLVV*AKGPIL
Trigger: TAAAATTGGGCCTTTTGCCAACACTACCAAATACGC...ATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGTTCACATCATGGATTTaGCTCGCGGGGTTGTTATTC +
Preference number: 5 (lower is better)
Translates to: YLRCVCLQSSVILEGSLEFTSWI*LAGLLF
Trigger: GAATAACAACCCCGCGAGCAAAATCCATGATGTGAA...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGAATCCAGGAATAGCATaGTGCAGATGGAAGCCAAAC +
Preference number: 5 (lower is better)
Translates to: YLRCVCLQSSVILEGSLENPGIA*CRWKPN
Trigger: GTTTGGCTTCCATCTGCACAATGCTATTCCTGGATT...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGCTCTTTGGAGCACATCTTCCCACTGTaGACTCTTCACAAGCTCATA +
Preference number: 5 (lower is better)
Translates to: YLRCVCLQSSVILEGSLEHIFPL*TLHKLI
Trigger: TATGAGCTTGTGAAGAGTCAACAGTGGGAAGATGTG...CTCCAAAGAGCCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TCATTTTGGAAGGCTCTTTGGAGAGTCCGGTTTGGATTGTGCTACAGGAGAATCCTTGCCGATCTCACTTaGTCGCAAGAACTGGATGTT +
Preference number: 5 (lower is better)
Translates to: SFWKALWRVRFGLCYRRILADLT*SQELDV
Trigger: AACATCCAGTTCTTGCGACAAAGTGAGATCGGCAAG...GATTCTCCTGTAGCACAATCCAAACCGGACTCTCCAAAGAGCCTTCCAAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TCTTTGTTTCTGGTTTGTGTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCTCTGGTTCCTTCTATaGGTCAGGGAGTTTCTATTG +
Preference number: 5 (lower is better)
Translates to: SLFLVCVACVSAMCLSAELWFLL*VREFLL
Trigger: CAATAGAAACTCCCTGACCAATAGAAGGAACCAGAG...CTCTGCAGACAGACACATCGCAGATACACACGCAACACAAACCAGAAACAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CCAAGTAGAAAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGTTCAGTATTTCACAGTaGCTGCCACCCCAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: PSRKTSKNLTSFAVDGGQFSISQ*LPPQPG
Trigger: TCCAGGCTGGGGTGGCAGCAACTGTGAAATACTGAA...CTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTTTCTACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR CAA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCATGGTGTCTGAAGGCTTaGGCTAATGATATCCTGAGG +
Preference number: 5 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPWCLKA*ANDILR
Trigger: CCTCAGGATATCATTAGCCAAAGCCTTCAGACACCA...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCAGAGCATCAAAGTGCTTaGTATAAGTCATCACGGCCG +
Preference number: 5 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPEHQSA*YKSSRP
Trigger: CGGCCGTGATGACTTATACAAAGCACTTTGATGCTC...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp GTTGCGTGTGTATCTGCGATGTGTCTGTCTGCAGAGCAGTGTCATTTTGGAAGGATTTTAATCTCTCTCTaGGTTACCCGGCCCATATTA +
Preference number: 5 (lower is better)
Translates to: VACVSAMCLSAEQCHFGRILISL*VTRPIL
Trigger: TAATATGGGCCGGGTAACCAAGAGAGAGATTAAAAT...CCTTCCAAAATGACACTGCTCTGCAGACAGACACATCGCAGATACACACGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp AATCAGGGTTTCCTTTGCTTATCAGTGACAAGGATTCTATTCGTCAGTTTTTCCCGCAAGAACTGGATGTaGTTGGCACTGTCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: NQGFLCLSVTRILFVSFSRKNWM*LALSAS
Trigger: GCTGGCTGACAGTGCCAACAACATCCAGTTCTTGCG...GGAAAAACTGACGAATAGAATCCTTGTCACTGATAAGCAAAGGAAACCCTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000033965.14
CDS TCA 90 bp TGCTGTCGTATAAAATTTCTGATAGCCTGGTCTGCCTTCTATACTTaGATAAGACCCTCCGACTCGTTCCCAGGAAAGCTGTTTGCAGAA +
Preference number: 5 (lower is better)
Translates to: CCRIKFLIAWSAFYT*IRPSDSFPGKLFAE
Trigger: TTCTGCAAACAGCTTTCCTGGGAACGAGTCGGAGGGTCTTATTCAAGTATAGAAGGCAGACCAGGCTATCAGAAATTTTATACGACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp AGTAGAAAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGGGGAACCTCTTGAATaGCTCTCCGGCCAATATCAA +
Preference number: 5 (lower is better)
Translates to: SRKTSKNLTSFAVDGGQGGEPLE*LSGQYQ
Trigger: TTGATATTGGCCGGAGAGCAATTCAAGAGGTTCCCC...TCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTTTCTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS GCA 90 bp AAACTGACTCTTGTGCTGTCGTATAAAATTTCTGATAGCCTGGTCTaGCTTCTATACTTGAATAAGACCCTCCGACTCGTTCCCAGGAAA +
Preference number: 5 (lower is better)
Translates to: KLTLVLSYKISDSLV*LLYLNKTLRLVPRK
Trigger: TTTCCTGGGAACGAGTCGGAGGGTCTTATTCAAGTATAGAAGGCAGACCAGGCTATCAGAAATTTTATACGACAGCACAAGAGTCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp AAAACTTCCAAGAATTTGACCTCTTTTGCAGTAGATGGAGGACAGGGAGAAGCAACGATACAGTGTTTGTaGGCACGGTGTCAGAATTCA +
Preference number: 5 (lower is better)
Translates to: KTSKNLTSFAVDGGQGEATIQCL*ARCQNS
Trigger: TGAATTCTGACACCGTGCCAACAAACACTGTATCGT...TGCTTCTCCCTGTCCTCCATCTACTGCAAAAGAGGTCAAATTCTTGGAAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR CAA 90 bp CAAACTGCAATTTCTTTATGCGAGTCCATTTTTATGGCCATCATACTAAACAACCCGGACAGGCTGCTCTaGAACAATCCGGACCTAGAA +
Preference number: 5 (lower is better)
Translates to: QTAISLCESIFMAIILNNPDRLL*NNPDLE
Trigger: TTCTAGGTCCGGATTGTTCAAGAGCAGCCTGTCCGG...GTTGTTTAGTATGATGGCCATAAAAATGGACTCGCATAAAGAAATTGCAGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR CAA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAAGAGAAGCGCCACCATTaGCCACCAAGTCAAACATTC +
Preference number: 5 (lower is better)
Translates to: FSFLILPVQLSAAICVCKEKRHH*PPSQTF
Trigger: GAATGTTTGACTTGGTGGCAAATGGTGGCGCTTCTC...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TTACAAAGCAGCACGGGAAAGCAGTTGGGTTCTATAAACAGTAACTTTGCCCCATTAGTTCTAAAACACTaGTCACATTCCCAGACGGGA +
Preference number: 5 (lower is better)
Translates to: LQSSTGKQLGSINSNFAPLVLKH*SHSQTG
Trigger: TCCCGTCTGGGAATGTGACAAGTGTTTTAGAACTAA...TGGGGCAAAGTTACTGTTTATAGAACCCAACTGCTTTCCCGTGCTGCTTTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAAGACTTTGCCCTGGGCTaGTTCTTTTCGGAATCTCCA +
Preference number: 5 (lower is better)
Translates to: FSFLILPVQLSAAICVCKDFALG*FFSESP
Trigger: TGGAGATTCCGAAAAGAACAAGCCCAGGGCAAAGTC...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp CAAACTGCAATTTCTTTATGCGAGTCCATTTTTATGGCCATCATACTAAACAACGAGTTTGGTCTGGGTTaGGTCCCAGCACAGAACAGG +
Preference number: 5 (lower is better)
Translates to: QTAISLCESIFMAIILNNEFGLG*VPAQNR
Trigger: CCTGTTCTGTGCTGGGACCAAACCCAGACCAAACTC...GTTGTTTAGTATGATGGCCATAAAAATGGACTCGCATAAAGAAATTGCAGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110346.9
CDS-3UTR CAA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAATACTCGTACGCGTATTaGGTAGTGTTGGCAAAAGGC +
Preference number: 5 (lower is better)
Translates to: FSFLILPVQLSAAICVCKYSYAY*VVLAKG
Trigger: GCCTTTTGCCAACACTACCAAATACGCGTACGAGTA...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAACCAAAGTGGATTAGTTaGGTGAGCGGGTCATACAAG +
Preference number: 5 (lower is better)
Translates to: FSFLILPVQLSAAICVCKPKWIS*VSGSYK
Trigger: CTTGTATGACCCGCTCACCAAACTAATCCACTTTGG...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS-3UTR CAA 90 bp TTTTCCTTTCTCATACTTCCAGTCCAATTGAGTGCAGCGATATGCGTATGTAAAAAAGATGTAGAGCTCTaGATCAGTTGGAGAGGCAAC +
Preference number: 5 (lower is better)
Translates to: FSFLILPVQLSAAICVCKKDVEL*ISWRGN
Trigger: GTTGCCTCTCCAACTGATCAAGAGCTCTACATCTTT...TTTACATACGCATATCGCTGCACTCAATTGGACTGGAAGTATGAGAAAGGAAAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 90 bp TTCTCTGTGGACCAAATCCTTTACTCTGTTTCCATAAAGCAGCCGTaGAGAATCATGATCGAAAGCTTTCAAGGTTTCACTGGAACTATA +
Preference number: 5 (lower is better)
Translates to: FSVDQILYSVSIKQP*RIMIESFQGFTGTI
Trigger: TATAGTTCCAGTGAAACCTTGAAAGCTTTCGATCATGATTCTTCACGGCTGCTTTATGGAAACAGAGTAAAGGATTTGGTCCACAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
ENSMUST00000211812.2
CDS GCA 90 bp GTGTCAGAATTCACTTTTCCATTCTCGAATGTGTCATTTTCCGTCTaGTGTAAGTGCCAGTTGAGGCCAAATAGATGCATTGCTATAAAA +
Preference number: 5 (lower is better)
Translates to: VSEFTFPFSNVSFSV*CKCQLRPNRCIAIK
Trigger: TTTTATAGCAATGCATCTATTTGGCCTCAACTGGCACTTACAGCAGACGGAAAATGACACATTCGAGAATGGAAAAGTGAATTCTGACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000033965.14
ENSMUST00000110346.9
ENSMUST00000190840.8
ENSMUST00000211976.2
CDS GCA 72 bp CGTGGCCGTGCGGAGCGGAGCCCGGCGCTGCCAACTTaGCTGGGTCTGGAGCGGATCGCGTTACAGCGCCGG +
Preference number: 6 (lower is better)
Translates to: RGRAERSPALPT*LGLERIALQRR
Trigger: CCGGCGCTGTAACGCGATCCGCTCCAGACCCAGGCAAGTTGGCAGCGCCGGGCTCCGCTCCGCACGGCCACG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211976.2
CDS CCA 72 bp CGGAGCGGAGCCCGGCGCTGCCAACTTGCCTGGGTCTaGAGCGGATCGCGTTACAGCGCCGGGCTCGGGGCT +
Preference number: 6 (lower is better)
Translates to: RSGARRCQLAWV*SGSRYSAGLGA
Trigger: AGCCCCGAGCCCGGCGCTGTAACGCGATCCGCTCCAGACCCAGGCAAGTTGGCAGCGCCGGGCTCCGCTCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211976.2
CDS CCA 72 bp GCCGTGCGGAGCGGAGCCCGGCGCTGCCAACTTGCCTaGGTCTGGAGCGGATCGCGTTACAGCGCCGGGCTC +
Preference number: 6 (lower is better)
Translates to: AVRSGARRCQLA*VWSGSRYSAGL
Trigger: GAGCCCGGCGCTGTAACGCGATCCGCTCCAGACCCAGGCAAGTTGGCAGCGCCGGGCTCCGCTCCGCACGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211976.2
CDS CCA 72 bp GGACGGGTGATGCTGCGCCGGGTGCTGCTTGTGGGATaGCGGCAAAGGCTGCAGGGTGGGTTGCCCTGGGTT +
Preference number: 6 (lower is better)
Translates to: GRVMLRRVLLVG*RQRLQGGLPWV
Trigger: AACCCAGGGCAACCCACCCTGCAGCCTTTGCCGCCATCCCACAAGCAGCACCCGGCGCAGCATCACCCGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp GTGGCGAACCACAGCCACGACTGCTCGGCGCCAGCTTaGCGTCGGCTCACCTGCACCTCGGCCATCTTCCCC +
Preference number: 6 (lower is better)
Translates to: VANHSHDCSAPA*RRLTCTSAIFP
Trigger: GGGGAAGATGGCCGAGGTGCAGGTGAGCCGACGCAAAGCTGGCGCCGAGCAGTCGTGGCTGTGGTTCGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 90 bp CGGCCTTGGCTCACGGCCAGCATGACGCCCTTGCCGATGAGCGACTaGACCGTGGCGAACCACAGCCACGACTGCTCGGCGCCAGCTTTG +
Preference number: 6 (lower is better)
Translates to: RPWLTASMTPLPMSD*TVANHSHDCSAPAL
Trigger: CAAAGCTGGCGCCGAGCAGTCGTGGCTGTGGTTCGCCACGGTCAAGTCGCTCATCGGCAAGGGCGTCATGCTGGCCGTGAGCCAAGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 72 bp CACGACTGCTCGGCGCCAGCTTTGCGTCGGCTCACCTaGACCTCGGCCATCTTCCCCAGGGACAAGAAGGCC +
Preference number: 6 (lower is better)
Translates to: HDCSAPALRRLT*TSAIFPRDKKA
Trigger: GGCCTTCTTGTCCCTGGGGAAGATGGCCGAGGTGCAGGTGAGCCGACGCAAAGCTGGCGCCGAGCAGTCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 72 bp TGGCGAACCACAGCCACGACTGCTCGGCGCCAGCTTTaGGTCGGCTCACCTGCACCTCGGCCATCTTCCCCA +
Preference number: 6 (lower is better)
Translates to: WRTTATTARRQL*VGSPAPRPSSP
Trigger: TGGGGAAGATGGCCGAGGTGCAGGTGAGCCGACGCAAAGCTGGCGCCGAGCAGTCGTGGCTGTGGTTCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp CTCACGGCCAGCATGACGCCCTTGCCGATGAGCGACTaGACCGTGGCGAACCACAGCCACGACTGCTCGGCG +
Preference number: 6 (lower is better)
Translates to: LTASMTPLPMSD*TVANHSHDCSA
Trigger: CGCCGAGCAGTCGTGGCTGTGGTTCGCCACGGTCAAGTCGCTCATCGGCAAGGGCGTCATGCTGGCCGTGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp TGCACGCGGCCTTGGCTCACGGCCAGCATGACGCCCTaGCCGATGAGCGACTTGACCGTGGCGAACCACAGC +
Preference number: 6 (lower is better)
Translates to: CTRPWLTASMTP*PMSDLTVANHS
Trigger: GCTGTGGTTCGCCACGGTCAAGTCGCTCATCGGCAAGGGCGTCATGCTGGCCGTGAGCCAAGGCCGCGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 90 bp GACTTGACCGTGGCGAACCACAGCCACGACTGCTCGGCGCCAGCTTaGCGTCGGCTCACCTGCACCTCGGCCATCTTCCCCAGGGACAAG +
Preference number: 6 (lower is better)
Translates to: DLTVANHSHDCSAPA*RRLTCTSAIFPRDK
Trigger: CTTGTCCCTGGGGAAGATGGCCGAGGTGCAGGTGAGCCGACGCAAAGCTGGCGCCGAGCAGTCGTGGCTGTGGTTCGCCACGGTCAAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 90 bp ACGTTGGTCTGCACGCGGCCTTGGCTCACGGCCAGCATGACGCCCTaGCCGATGAGCGACTTGACCGTGGCGAACCACAGCCACGACTGC +
Preference number: 6 (lower is better)
Translates to: TLVCTRPWLTASMTP*PMSDLTVANHSHDC
Trigger: GCAGTCGTGGCTGTGGTTCGCCACGGTCAAGTCGCTCATCGGCAAGGGCGTCATGCTGGCCGTGAGCCAAGGCCGCGTGCAGACCAACGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 72 bp ATGAGCGACTTGACCGTGGCGAACCACAGCCACGACTaGTCGGCGCCAGCTTTGCGTCGGCTCACCTGCACC +
Preference number: 6 (lower is better)
Translates to: MSDLTVANHSHD*SAPALRRLTCT
Trigger: GGTGCAGGTGAGCCGACGCAAAGCTGGCGCCGAGCAGTCGTGGCTGTGGTTCGCCACGGTCAAGTCGCTCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 90 bp ACCGCCGCCACCTTGATGCAGTCCTCGTTGGCGATGTTGAGCACGTaGGTCTGCACGCGGCCTTGGCTCACGGCCAGCATGACGCCCTTG +
Preference number: 6 (lower is better)
Translates to: TAATLMQSSLAMLST*VCTRPWLTASMTPL
Trigger: CAAGGGCGTCATGCTGGCCGTGAGCCAAGGCCGCGTGCAGACCAACGTGCTCAACATCGCCAACGAGGACTGCATCAAGGTGGCGGCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 72 bp AAGGACCCCGCTGTAGGACACAGCAATGGCCGTGGCTaGCTCCAGGGTGGTCTGAACCGCGTGCTTCCCCAC +
Preference number: 6 (lower is better)
Translates to: KDPAVGHSNGRG*LQGGLNRVLPH
Trigger: GTGGGGAAGCACGCGGTTCAGACCACCCTGGAGTCAGCCACGGCCATTGCTGTGTCCTACAGCGGGGTCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 72 bp TGCGCCGGGTGCTGCTTGTGGGATGGCGGCAAAGGCTaGAGGGTGGGTTGCCCTGGGTTGTTTGAAGGTTGC +
Preference number: 6 (lower is better)
Translates to: CAGCCLWDGGKG*RVGCPGLFEGC
Trigger: GCAACCTTCAAACAACCCAGGGCAACCCACCCTGCAGCCTTTGCCGCCATCCCACAAGCAGCACCCGGCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 72 bp ATGAAGCCAGCTTCGTGCAGGCTGACAGATCTCGCCTaGCGCCCGGCTCTTTCGGACTCCACCAGGTTCCGC +
Preference number: 6 (lower is better)
Translates to: MKPASCRLTDLA*RPALSDSTRFR
Trigger: GCGGAACCTGGTGGAGTCCGAAAGAGCCGGGCGGCAGGCGAGATCTGTCAGCCTGCACGAAGCTGGCTTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000110346.9
ENSMUST00000190840.8
CDS GCA 72 bp ATGCAGTCCTCGTTGGCGATGTTGAGCACGTTGGTCTaGACGCGGCCTTGGCTCACGGCCAGCATGACGCCC +
Preference number: 6 (lower is better)
Translates to: MQSSLAMLSTLV*TRPWLTASMTP
Trigger: GGGCGTCATGCTGGCCGTGAGCCAAGGCCGCGTGCAGACCAACGTGCTCAACATCGCCAACGAGGACTGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 72 bp TTGGCGATGTTGAGCACGTTGGTCTGCACGCGGCCTTaGCTCACGGCCAGCATGACGCCCTTGCCGATGAGC +
Preference number: 6 (lower is better)
Translates to: LAMLSTLVCTRP*LTASMTPLPMS
Trigger: GCTCATCGGCAAGGGCGTCATGCTGGCCGTGAGCCAAGGCCGCGTGCAGACCAACGTGCTCAACATCGCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp GTTGGCGATGTTGAGCACGTTGGTCTGCACGCGGCCTaGGCTCACGGCCAGCATGACGCCCTTGCCGATGAG +
Preference number: 6 (lower is better)
Translates to: VGDVEHVGLHAA*AHGQHDALADE
Trigger: CTCATCGGCAAGGGCGTCATGCTGGCCGTGAGCCAAGGCCGCGTGCAGACCAACGTGCTCAACATCGCCAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp ACCGCCGCCACCTTGATGCAGTCCTCGTTGGCGATGTaGAGCACGTTGGTCTGCACGCGGCCTTGGCTCACG +
Preference number: 6 (lower is better)
Translates to: TAATLMQSSLAM*STLVCTRPWLT
Trigger: CGTGAGCCAAGGCCGCGTGCAGACCAACGTGCTCAACATCGCCAACGAGGACTGCATCAAGGTGGCGGCGGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 90 bp GCAGTCCTCGTTGGCGATGTTGAGCACGTTGGTCTGCACGCGGCCTaGGCTCACGGCCAGCATGACGCCCTTGCCGATGAGCGACTTGAC +
Preference number: 6 (lower is better)
Translates to: AVLVGDVEHVGLHAA*AHGQHDALADERLD
Trigger: GTCAAGTCGCTCATCGGCAAGGGCGTCATGCTGGCCGTGAGCCAAGGCCGCGTGCAGACCAACGTGCTCAACATCGCCAACGAGGACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 90 bp TTGTTGAGCACCGCCGCCACCTTGATGCAGTCCTCGTTGGCGATGTaGAGCACGTTGGTCTGCACGCGGCCTTGGCTCACGGCCAGCATG +
Preference number: 6 (lower is better)
Translates to: LLSTAATLMQSSLAM*STLVCTRPWLTASM
Trigger: CATGCTGGCCGTGAGCCAAGGCCGCGTGCAGACCAACGTGCTCAACATCGCCAACGAGGACTGCATCAAGGTGGCGGCGGTGCTCAACAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 72 bp GACACAGCAATGGCCGTGGCTGACTCCAGGGTGGTCTaGACCGCGTGCTTCCCCACCGGGTATTCCACTCCA +
Preference number: 6 (lower is better)
Translates to: DTAMAVADSRVV*TACFPTGYSTP
Trigger: TGGAGTGGAATACCCGGTGGGGAAGCACGCGGTTCAGACCACCCTGGAGTCAGCCACGGCCATTGCTGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 72 bp CAAGAGCCCATGATGCAAATCCCACGACCCCCGCACTaGGGGTCAATGCACTGGGTCGTCGGCACGTCACAC +
Preference number: 6 (lower is better)
Translates to: QEPMMQIPRPPH*GSMHWVVGTSH
Trigger: GTGTGACGTGCCGACGACCCAGTGCATTGACCCGCAGTGCGGGGGTCGTGGGATTTGCATCATGGGCTCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000110346.9
ENSMUST00000190840.8
CDS GCA 72 bp CGAACTGCATCTCCACGTCGGCGAACCTGCGAGTCCTaGCGTTCACCACCGTGGTGGACTGAGACACGGTCA +
Preference number: 6 (lower is better)
Translates to: RTASPRRRTCES*RSPPWWTETRS
Trigger: TGACCGTGTCTCAGTCCACCACGGTGGTGAACGGCAGGACTCGCAGGTTCGCCGACGTGGAGATGCAGTTCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 72 bp GCTCCAGAATGCGCGCCTTCTCCTCGTCCAGCGTCATaGCATAGCGCACATGCAGTGCCAGGGCACCGAACT +
Preference number: 6 (lower is better)
Translates to: APECAPSPRPAS*HSAHAVPGHRT
Trigger: AGTTCGGTGCCCTGGCACTGCATGTGCGCTATGGCATGACGCTGGACGAGGAGAAGGCGCGCATTCTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 72 bp CCGACAGTACGTAGTACCCATCGTAGCCCTGCACCTTaGCAGCGCTCAGCAGCTGCCGTTTCTCACCCTCCG +
Preference number: 6 (lower is better)
Translates to: PTVRSTHRSPAP*QRSAAAVSHPP
Trigger: CGGAGGGTGAGAAACGGCAGCTGCTGAGCGCTGGCAAGGTGCAGGGCTACGATGGGTACTACGTACTGTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp GCCGTACTGAACAGTGGCGTCGTCCCTGTCCCTGTTTaGAATAGGAAATGCCTTGCCGCCGCGCGCCCTCGC +
Preference number: 6 (lower is better)
Translates to: AVLNSGVVPVPV*NRKCLAAARPR
Trigger: GCGAGGGCGCGCGGCGGCAAGGCATTTCCTATTCAAAACAGGGACAGGGACGACGCCACTGTTCAGTACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211976.2
CDS CAA 90 bp TGTGGGATGGCGGCAAAGGCTGCAGGGTGGGTTGCCCTGGGTTGTTaGAAGGTTGCTCGCTCTCACTGTCCGACCTGTTCTCGTGCTCCG +
Preference number: 6 (lower is better)
Translates to: CGMAAKAAGWVALGC*KVARSHCPTCSRAP
Trigger: CGGAGCACGAGAACAGGTCGGACAGTGAGAGCGAGCAACCTTCAAACAACCCAGGGCAACCCACCCTGCAGCCTTTGCCGCCATCCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 72 bp GTCAGGGAGTTTCTATTGAGGGAAGTGATGGACGGGTaGTGCTGCGCCGGGTGCTGCTTGTGGGATGGCGGC +
Preference number: 6 (lower is better)
Translates to: VREFLLREVMDG*CCAGCCLWDGG
Trigger: GCCGCCATCCCACAAGCAGCACCCGGCGCAGCATCACCCGTCCATCACTTCCCTCAATAGAAACTCCCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 72 bp GAAGGTTGCTCGCTCTCACTGTCCGACCTGTTCTCGTaGTCCGTGTCTGTCAGGGTGAGGGCGGAGTTGGAC +
Preference number: 6 (lower is better)
Translates to: EGCSLSLSDLFS*SVSVRVRAELD
Trigger: GTCCAACTCCGCCCTCACCCTGACAGACACGGAGCACGAGAACAGGTCGGACAGTGAGAGCGAGCAACCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 72 bp GGTGCTGCTTGTGGGATGGCGGCAAAGGCTGCAGGGTaGGTTGCCCTGGGTTGTTTGAAGGTTGCTCGCTCT +
Preference number: 6 (lower is better)
Translates to: GAACGMAAKAAG*VALGCLKVARS
Trigger: AGAGCGAGCAACCTTCAAACAACCCAGGGCAACCCACCCTGCAGCCTTTGCCGCCATCCCACAAGCAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 72 bp AGCTCGGCGGGCAAAGCAGCCGGCGGGGCCGGACTCTaGTTCCTTCTATTGGTCAGGGAGTTTCTATTGAGG +
Preference number: 6 (lower is better)
Translates to: SSAGKAAGGAGL*FLLLVREFLLR
Trigger: CCTCAATAGAAACTCCCTGACCAATAGAAGGAACCAGAGTCCGGCCCCGCCGGCTGCTTTGCCCGCCGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp GATGGCGGCAAAGGCTGCAGGGTGGGTTGCCCTGGGTaGTTTGAAGGTTGCTCGCTCTCACTGTCCGACCTG +
Preference number: 6 (lower is better)
Translates to: DGGKGCRVGCPG*FEGCSLSLSDL
Trigger: CAGGTCGGACAGTGAGAGCGAGCAACCTTCAAACAACCCAGGGCAACCCACCCTGCAGCCTTTGCCGCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp ACCTTGATGCAGTCCTCGTTGGCGATGTTGAGCACGTaGGTCTGCACGCGGCCTTGGCTCACGGCCAGCATG +
Preference number: 6 (lower is better)
Translates to: TLMQSSLAMLST*VCTRPWLTASM
Trigger: CATGCTGGCCGTGAGCCAAGGCCGCGTGCAGACCAACGTGCTCAACATCGCCAACGAGGACTGCATCAAGGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp TTGTTGAGCACCGCCGCCACCTTGATGCAGTCCTCGTaGGCGATGTTGAGCACGTTGGTCTGCACGCGGCCT +
Preference number: 6 (lower is better)
Translates to: LLSTAATLMQSS*AMLSTLVCTRP
Trigger: AGGCCGCGTGCAGACCAACGTGCTCAACATCGCCAACGAGGACTGCATCAAGGTGGCGGCGGTGCTCAACAA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 90 bp TGCTTGTGGGATGGCGGCAAAGGCTGCAGGGTGGGTTGCCCTGGGTaGTTTGAAGGTTGCTCGCTCTCACTGTCCGACCTGTTCTCGTGC +
Preference number: 6 (lower is better)
Translates to: CLWDGGKGCRVGCPG*FEGCSLSLSDLFSC
Trigger: GCACGAGAACAGGTCGGACAGTGAGAGCGAGCAACCTTCAAACAACCCAGGGCAACCCACCCTGCAGCCTTTGCCGCCATCCCACAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 90 bp CACCTGCACCTCGGCCATCTTCCCCAGGGACAAGAAGGCCTTGGCTaGCCTTGCCACTTGCTGCTGAACTCCAAAGATGGGCGGCACATC +
Preference number: 6 (lower is better)
Translates to: HLHLGHLPQGQEGLG*PCHLLLNSKDGRHI
Trigger: GATGTGCCGCCCATCTTTGGAGTTCAGCAGCAAGTGGCAAGGCAAGCCAAGGCCTTCTTGTCCCTGGGGAAGATGGCCGAGGTGCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 72 bp TGCTTGTGGGATGGCGGCAAAGGCTGCAGGGTGGGTTaGCCTGGGTTGTTTGAAGGTTGCTCGCTCTCACTG +
Preference number: 6 (lower is better)
Translates to: CLWDGGKGCRVG*PGLFEGCSLSL
Trigger: CAGTGAGAGCGAGCAACCTTCAAACAACCCAGGGCAACCCACCCTGCAGCCTTTGCCGCCATCCCACAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp GCGGCAAAGGCTGCAGGGTGGGTTGCCCTGGGTTGTTaGAAGGTTGCTCGCTCTCACTGTCCGACCTGTTCT +
Preference number: 6 (lower is better)
Translates to: AAKAAGWVALGC*KVARSHCPTCS
Trigger: AGAACAGGTCGGACAGTGAGAGCGAGCAACCTTCAAACAACCCAGGGCAACCCACCCTGCAGCCTTTGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 72 bp AGCGCCACGGGTGCCAGGAGTTTGTTCCCGTCAGCTTaGCCATTGCAACTTGGGCATGAGATGCTACGCCTC +
Preference number: 6 (lower is better)
Translates to: SATGARSLFPSA*PLQLGHEMLRL
Trigger: GAGGCGTAGCATCTCATGCCCAAGTTGCAATGGTCAAGCTGACGGGAACAAACTCCTGGCACCCGTGGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 72 bp TGCCGCCCGGCTCTTTCGGACTCCACCAGGTTCCGCTaGTCTCTCGCAATTAACCTGCTACCATCCAGTAGT +
Preference number: 6 (lower is better)
Translates to: CRPALSDSTRFR*SLAINLLPSSS
Trigger: ACTACTGGATGGTAGCAGGTTAATTGCGAGAGAGCAGCGGAACCTGGTGGAGTCCGAAAGAGCCGGGCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000110346.9
ENSMUST00000190840.8
CDS GCA 72 bp TTGAGCAGTCGGGGCCAGTCCAATTTGGGTCGCAAGTaGAGGAGCCGCTTTCTTGAAGGTAAGTCCCGTGGC +
Preference number: 6 (lower is better)
Translates to: LSSRGQSNLGRK*RSRFLEGKSRG
Trigger: GCCACGGGACTTACCTTCAAGAAAGCGGCTCCTGCACTTGCGACCCAAATTGGACTGGCCCCGACTGCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000110346.9
ENSMUST00000190840.8
CDS GCA 72 bp CATTGCTGTTGCACAAGCCGGGGCAACCCTCAATTGTaGAGTGCTCTCCGTTCCATCCTTGGCTGCACTCGC +
Preference number: 6 (lower is better)
Translates to: HCCCTSRGNPQL*SALRSILGCTR
Trigger: GCGAGTGCAGCCAAGGATGGAACGGAGAGCACTGCACAATTGAGGGTTGCCCCGGCTTGTGCAACAGCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190840.8
CDS CCA 72 bp TCCTCCCCTGGCTGTCATAGTCCACCTTTTCGCTCGTaGTCCCTCTCTGGATGCTGGCAATTTGACCGGTGG +
Preference number: 6 (lower is better)
Translates to: SSPGCHSPPFRS*SLSGCWQFDRW
Trigger: CCACCGGTCAAATTGCCAGCATCCAGAGAGGGACCACGAGCGAAAAGGTGGACTATGACAGCCAGGGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp CTCGGCCATCTTCCCCAGGGACAAGAAGGCCTTGGCTaGCCTTGCCACTTGCTGCTGAACTCCAAAGATGGG +
Preference number: 6 (lower is better)
Translates to: LGHLPQGQEGLG*PCHLLLNSKDG
Trigger: CCCATCTTTGGAGTTCAGCAGCAAGTGGCAAGGCAAGCCAAGGCCTTCTTGTCCCTGGGGAAGATGGCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 90 bp ACCCGCACCGGCATCCGATTCGGATCCCTTCGGATTCGGAGGGTGTaGCCATTGCTGTCAGTTACAGCGGTGACGTCATTGTCATTGCTG +
Preference number: 6 (lower is better)
Translates to: TRTGIRFGSLRIRRV*PLLSVTAVTSLSLL
Trigger: CAGCAATGACAATGACGTCACCGCTGTAACTGACAGCAATGGCAACACCCTCCGAATCCGAAGGGATCCGAATCGGATGCCGGTGCGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 72 bp CTCCTTTGTATCCCGAGTTACAAGCGCAAGAGCCCATaGTGCAAATCCCACGACCCCCGCACTGCGGGTCAA +
Preference number: 6 (lower is better)
Translates to: LLCIPSYKRKSP*CKSHDPRTAGQ
Trigger: TTGACCCGCAGTGCGGGGGTCGTGGGATTTGCATCATGGGCTCTTGCGCTTGTAACTCGGGATACAAAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000110346.9
ENSMUST00000190840.8
CDS GCA 72 bp CGGGTGCCAGGAGTTTGTTCCCGTCAGCTTGACCATTaGAACTTGGGCATGAGATGCTACGCCTCCGACCAT +
Preference number: 6 (lower is better)
Translates to: RVPGVCSRQLDH*NLGMRCYASDH
Trigger: ATGGTCGGAGGCGTAGCATCTCATGCCCAAGTTGCAATGGTCAAGCTGACGGGAACAAACTCCTGGCACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 72 bp CTTCGAAACGGCCCGGATCCTGATATTTCCCAGATCTaGAATGTACAGAGTGCCATCTGGCGAGGCGGCCAG +
Preference number: 6 (lower is better)
Translates to: LRNGPDPDISQI*NVQSAIWRGGQ
Trigger: CTGGCCGCCTCGCCAGATGGCACTCTGTACATTGCAGATCTGGGAAATATCAGGATCCGGGCCGTTTCGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 72 bp AGACACCCGTTGGTGCCTATGGTCAACCATATCACCTaGTTATCAGGAGACACCACCCGCACCGGCATCCGA +
Preference number: 6 (lower is better)
Translates to: RHPLVPMVNHIT*LSGDTTRTGIR
Trigger: TCGGATGCCGGTGCGGGTGGTGTCTCCTGATAACCAGGTGATATGGTTGACCATAGGCACCAACGGGTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp CTGAGGATCAGGCAAGCCACGACAGTAGGGCTGGTTTaGGCAGGAGCTCTGGAGGCAGCAATCAGGATCCAT +
Preference number: 6 (lower is better)
Translates to: LRIRQATTVGLV*AGALEAAIRIH
Trigger: ATGGATCCTGATTGCTGCCTCCAGAGCTCCTGCCAAAACCAGCCCTACTGTCGTGGCTTGCCTGATCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 90 bp ACTTCTGCGTGGGGACCCTACACTCCTCATTGTCCGCGGACGAGTTaGTATAGCGCCTTTCCTTTTCCCGTCTGCTCTTGGTCAAGGAGC +
Preference number: 6 (lower is better)
Translates to: TSAWGPYTPHCPRTS*YSAFPFPVCSWSRS
Trigger: GCTCCTTGACCAAGAGCAGACGGGAAAAGGAAAGGCGCTATACAAACTCGTCCGCGGACAATGAGGAGTGTAGGGTCCCCACGCAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
ENSMUST00000211812.2
CDS CAA 90 bp GGACGGCGCATTGAGTTTGGCATCTTTGGCGTAGCCGTCTCCGCTTaGGTAGCAGTCACAGTTGGCGTCGTTCTTGCAGTCACATTCCGA +
Preference number: 6 (lower is better)
Translates to: GRRIEFGIFGVAVSA*VAVTVGVVLAVTFR
Trigger: TCGGAATGTGACTGCAAGAACGACGCCAACTGTGACTGCTACCAAAGCGGAGACGGCTACGCCAAAGATGCCAAACTCAATGCGCCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 90 bp GAGAGTAGGTTGCGCCCATTGACCCTGAGCTTCCGGCCGAATACGTaGACTTTGCCCTGGGCTTGTTCTTTTCGGAATCTCCACTCCACC +
Preference number: 6 (lower is better)
Translates to: ESRLRPLTLSFRPNT*TLPWACSFRNLHST
Trigger: GGTGGAGTGGAGATTCCGAAAAGAACAAGCCCAGGGCAAAGTCAACGTATTCGGCCGGAAGCTCAGGGTCAATGGGCGCAACCTACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 72 bp CTGCTTCGTTTTCCGTATCCGCATCTGACCCTGCACTaGTGGAGTAACCTCTGTGAGGGAGCCCCATTTCCG +
Preference number: 6 (lower is better)
Translates to: LLRFPYPHLTLH*WSNLCEGAPFP
Trigger: CGGAAATGGGGCTCCCTCACAGAGGTTACTCCATCAGTGCAGGGTCAGATGCGGATACGGAAAACGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
ENSMUST00000211812.2
CDS GCA 72 bp GTAACCTCTGTGAGGGAGCCCCATTTCCGCACAGAATaGCACTCCTCTTCGAGTTGCGGATTCACACACTCC +
Preference number: 6 (lower is better)
Translates to: VTSVREPHFRTE*HSSSSCGFTHS
Trigger: GGAGTGTGTGAATCCGCAACTCGAAGAGGAGTGGCATTCTGTGCGGAAATGGGGCTCCCTCACAGAGGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
ENSMUST00000211812.2
CDS GCA 72 bp ATAAACAGAGCCAGATGCCATTGTGTATCCCGGGGTTaGCGTACTGAACAGTGGCGTCGTCCCTGTCCCTGT +
Preference number: 6 (lower is better)
Translates to: INRARCHCVSRG*RTEQWRRPCPC
Trigger: ACAGGGACAGGGACGACGCCACTGTTCAGTACGGCAACCCCGGGATACACAATGGCATCTGGCTCTGTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
ENSMUST00000211976.2
CDS GCA 72 bp AAGTGGCCGGGTAGGCGGAGAATAAACAGAGCCAGATaGCATTGTGTATCCCGGGGTTGCCGTACTGAACAG +
Preference number: 6 (lower is better)
Translates to: KWPGRRRINRAR*HCVSRGCRTEQ
Trigger: CTGTTCAGTACGGCAACCCCGGGATACACAATGGCATCTGGCTCTGTTTATTCTCCGCCTACCCGGCCACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
ENSMUST00000211976.2
CDS GCA 72 bp GAGTCATGTTTCTTTTGGCTACTGTGGGATTCGCCGTaGCAGCCAGAACGTGGGGCTCTGTCTGGTAGTGAG +
Preference number: 6 (lower is better)
Translates to: ESCFFWLLWDSP*QPERGALSGSE
Trigger: CTCACTACCAGACAGAGCCCCACGTTCTGGCTGGCACGGCGAATCCCACAGTAGCCAAAAGAAACATGACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 72 bp CCAGGCCGTCGTACCGATAGATCACTGTCCAGCCACTaGCTTTACTGTAGACTCGAGTCAGAAGCCCTTTGG +
Preference number: 6 (lower is better)
Translates to: PGRRTDRSLSSH*LYCRLESEALW
Trigger: CCAAAGGGCTTCTGACTCGAGTCTACAGTAAAGGCAGTGGCTGGACAGTGATCTATCGGTACGACGGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 72 bp TGGCGTAGCCGTCTCCGCTTTGGTAGCAGTCACAGTTaGCGTCGTTCTTGCAGTCACATTCCGAAGGTATCC +
Preference number: 6 (lower is better)
Translates to: WRSRLRFGSSHS*RRSCSHIPKVS
Trigger: GGATACCTTCGGAATGTGACTGCAAGAACGACGCCAACTGTGACTGCTACCAAAGCGGAGACGGCTACGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 72 bp TCTGCCCGTTCTCACCGGGAAGAGTCATGTTTCTTTTaGCTACTGTGGGATTCGCCGTGCCAGCCAGAACGT +
Preference number: 6 (lower is better)
Translates to: SARSHREESCFF*LLWDSPCQPER
Trigger: ACGTTCTGGCTGGCACGGCGAATCCCACAGTAGCCAAAAGAAACATGACTCTTCCCGGTGAGAACGGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp AAAGCAGCCGGCGGGGCCGGACTCTGGTTCCTTCTATaGGTCAGGGAGTTTCTATTGAGGGAAGTGATGGAC +
Preference number: 6 (lower is better)
Translates to: KAAGGAGLWFLL*VREFLLREVMD
Trigger: GTCCATCACTTCCCTCAATAGAAACTCCCTGACCAATAGAAGGAACCAGAGTCCGGCCCCGCCGGCTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp GGCATCCGATTCGGATCCCTTCGGATTCGGAGGGTGTaGCCATTGCTGTCAGTTACAGCGGTGACGTCATTG +
Preference number: 6 (lower is better)
Translates to: GIRFGSLRIRRV*PLLSVTAVTSL
Trigger: CAATGACGTCACCGCTGTAACTGACAGCAATGGCAACACCCTCCGAATCCGAAGGGATCCGAATCGGATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp TCTCTGCTGGATGACTCGATGTCCACCGTGATAGCCTaGTCCATGTCCCCGTGCAGGTTTGTAACCACCCCA +
Preference number: 6 (lower is better)
Translates to: SLLDDSMSTVIA*SMSPCRFVTTP
Trigger: TGGGGTGGTTACAAACCTGCACGGGGACATGGACAAGGCTATCACGGTGGACATCGAGTCATCCAGCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp TTCTGCCCGTTCTCACCGGGAAGAGTCATGTTTCTTTaGGCTACTGTGGGATTCGCCGTGCCAGCCAGAACG +
Preference number: 6 (lower is better)
Translates to: FCPFSPGRVMFL*ATVGFAVPART
Trigger: CGTTCTGGCTGGCACGGCGAATCCCACAGTAGCCAAAAGAAACATGACTCTTCCCGGTGAGAACGGGCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 90 bp AGGTTGCGCCCATTGACCCTGAGCTTCCGGCCGAATACGTTGACTTaGCCCTGGGCTTGTTCTTTTCGGAATCTCCACTCCACCAGATTC +
Preference number: 6 (lower is better)
Translates to: RLRPLTLSFRPNTLT*PWACSFRNLHSTRF
Trigger: GAATCTGGTGGAGTGGAGATTCCGAAAAGAACAAGCCCAGGGCAAAGTCAACGTATTCGGCCGGAAGCTCAGGGTCAATGGGCGCAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 72 bp AGGGGACATCACTGCTTCGTTTTCCGTATCCGCATCTaGCCCTGCACTGATGGAGTAACCTCTGTGAGGGAG +
Preference number: 6 (lower is better)
Translates to: RGHHCFVFRIRI*PCTDGVTSVRE
Trigger: CTCCCTCACAGAGGTTACTCCATCAGTGCAGGGTCAGATGCGGATACGGAAAACGAAGCAGTGATGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
ENSMUST00000211812.2
CDS TCA 72 bp TCTGGATGCTGGCAATTTGACCGGTGGATGAGTAGGTaGCGTTCACTGCCATTAGCTTGCTACTCGGCAGCC +
Preference number: 6 (lower is better)
Translates to: SGCWQFDRWMSR*RSLPLACYSAA
Trigger: GGCTGCCGAGTAGCAAGCTAATGGCAGTGAACGTCACCTACTCATCCACCGGTCAAATTGCCAGCATCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 72 bp CGGACGAGTTTGTATAGCGCCTTTCCTTTTCCCGTCTaGTCTTGGTCAAGGAGCAGTAAGGCCTGCGTTCCT +
Preference number: 6 (lower is better)
Translates to: RTSLYSAFPFPV*SWSRSSKACVP
Trigger: AGGAACGCAGGCCTTACTGCTCCTTGACCAAGAGCAGACGGGAAAAGGAAAGGCGCTATACAAACTCGTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
ENSMUST00000211812.2
CDS GCA 72 bp GGCCCTGAGCGGTCATGCTTTTCAGACACCCGTTGGTaGCTATGGTCAACCATATCACCTGGTTATCAGGAG +
Preference number: 6 (lower is better)
Translates to: GPERSCFSDTRW*LWSTISPGYQE
Trigger: CTCCTGATAACCAGGTGATATGGTTGACCATAGGCACCAACGGGTGTCTGAAAAGCATGACCGCTCAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 72 bp CCAGGCCCTGAGCGGTCATGCTTTTCAGACACCCGTTaGTGCCTATGGTCAACCATATCACCTGGTTATCAG +
Preference number: 6 (lower is better)
Translates to: PGPERSCFSDTR*CLWSTISPGYQ
Trigger: CTGATAACCAGGTGATATGGTTGACCATAGGCACCAACGGGTGTCTGAAAAGCATGACCGCTCAGGGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 72 bp ACCCTGAGCTTCCGGCCGAATACGTTGACTTTGCCCTaGGCTTGTTCTTTTCGGAATCTCCACTCCACCAGA +
Preference number: 6 (lower is better)
Translates to: TLSFRPNTLTLP*ACSFRNLHSTR
Trigger: TCTGGTGGAGTGGAGATTCCGAAAAGAACAAGCCCAGGGCAAAGTCAACGTATTCGGCCGGAAGCTCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp CCAGCCGCCCATGTTCGAAGCATCCAACTCATAGCCTaGCAAAACGGCAGTCCTCTTTTCCCAGAGAGTCAG +
Preference number: 6 (lower is better)
Translates to: PAAHVRSIQLIA*QNGSPLFPESQ
Trigger: CTGACTCTCTGGGAAAAGAGGACTGCCGTTTTGCAAGGCTATGAGTTGGATGCTTCGAACATGGGCGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp CCAGGAGTTTGTTCCCGTCAGCTTGACCATTGCAACTaGGGCATGAGATGCTACGCCTCCGACCATTACCCA +
Preference number: 6 (lower is better)
Translates to: PGVCSRQLDHCN*GMRCYASDHYP
Trigger: TGGGTAATGGTCGGAGGCGTAGCATCTCATGCCCAAGTTGCAATGGTCAAGCTGACGGGAACAAACTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp CCATTGACCCTGAGCTTCCGGCCGAATACGTTGACTTaGCCCTGGGCTTGTTCTTTTCGGAATCTCCACTCC +
Preference number: 6 (lower is better)
Translates to: PLTLSFRPNTLT*PWACSFRNLHS
Trigger: GGAGTGGAGATTCCGAAAAGAACAAGCCCAGGGCAAAGTCAACGTATTCGGCCGGAAGCTCAGGGTCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp GTCCGATCAAAGTCCACTGAGAGTAGGTTGCGCCCATaGACCCTGAGCTTCCGGCCGAATACGTTGACTTTG +
Preference number: 6 (lower is better)
Translates to: VRSKSTESRLRP*TLSFRPNTLTL
Trigger: CAAAGTCAACGTATTCGGCCGGAAGCTCAGGGTCAATGGGCGCAACCTACTCTCAGTGGACTTTGATCGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 90 bp ATTGACCCTGAGCTTCCGGCCGAATACGTTGACTTTGCCCTGGGCTaGTTCTTTTCGGAATCTCCACTCCACCAGATTCTGCCCGTTCTC +
Preference number: 6 (lower is better)
Translates to: IDPELPAEYVDFALG*FFSESPLHQILPVL
Trigger: GAGAACGGGCAGAATCTGGTGGAGTGGAGATTCCGAAAAGAACAAGCCCAGGGCAAAGTCAACGTATTCGGCCGGAAGCTCAGGGTCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 72 bp GCAGGAGCCGCTTTCTTGAAGGTAAGTCCCGTGGCCTaGGCACTGGTCTGCACACATAGTCTTCAGTATTTC +
Preference number: 6 (lower is better)
Translates to: AGAAFLKVSPVA*ALVCTHSLQYF
Trigger: GAAATACTGAAGACTATGTGTGCAGACCAGTGCTCAGGCCACGGGACTTACCTTCAAGAAAGCGGCTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000110346.9
ENSMUST00000190840.8
CDS TCA 72 bp GGAGCACGTGGGTGCTATCCGATCCAATCAGGAAACTaGTTCGGTCATAGAAGGACTTGGCAGCTTGCTGAG +
Preference number: 6 (lower is better)
Translates to: GARGCYPIQSGN*FGHRRTWQLAE
Trigger: CTCAGCAAGCTGCCAAGTCCTTCTATGACCGAATCAGTTTCCTGATTGGATCGGATAGCACCCACGTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 72 bp TCACATTCCCAGACGGGAATATCCGCCGGACGTAATTaGAATCCCCTACGTATAGACTGCCGTCGATCCCAC +
Preference number: 6 (lower is better)
Translates to: SHSQTGISAGRN*NPLRIDCRRSH
Trigger: GTGGGATCGACGGCAGTCTATACGTAGGGGATTTCAATTACGTCCGGCGGATATTCCCGTCTGGGAATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 72 bp GCCGCCCGGCAGCGATGCGGACCTGACGGTTTTCAGTaGTCTGTAAAACTACGTTATTATCCAGGACGTAGA +
Preference number: 6 (lower is better)
Translates to: AARQRCGPDGFQ*SVKLRYYPGRR
Trigger: TCTACGTCCTGGATAATAACGTAGTTTTACAGATCACTGAAAACCGTCAGGTCCGCATCGCTGCCGGGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 72 bp GACAGGCGGTCCCACATGTCGTATTCGAAGATGTACTaGCGCTGGCTATGGAGCAGAAGAACCATGGACTTT +
Preference number: 6 (lower is better)
Translates to: DRRSHMSYSKMY*RWLWSRRTMDF
Trigger: AAAGTCCATGGTTCTTCTGCTCCATAGCCAGCGGCAGTACATCTTCGAATACGACATGTGGGACCGCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp GGACTTGGCAGCTTGCTGAGATGGTGTCTGAAGGCTTaGGCTAATGATATCCTGAGGATCAGGCAAGCCACG +
Preference number: 6 (lower is better)
Translates to: GLGSLLRWCLKA*ANDILRIRQAT
Trigger: CGTGGCTTGCCTGATCCTCAGGATATCATTAGCCAAAGCCTTCAGACACCATCTCAGCAAGCTGCCAAGTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp ATTGAGTTTGGCATCTTTGGCGTAGCCGTCTCCGCTTaGGTAGCAGTCACAGTTGGCGTCGTTCTTGCAGTC +
Preference number: 6 (lower is better)
Translates to: IEFGIFGVAVSA*VAVTVGVVLAV
Trigger: GACTGCAAGAACGACGCCAACTGTGACTGCTACCAAAGCGGAGACGGCTACGCCAAAGATGCCAAACTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp CGATTCGGATCCCTTCGGATTCGGAGGGTGTTGCCATaGCTGTCAGTTACAGCGGTGACGTCATTGTCATTG +
Preference number: 6 (lower is better)
Translates to: RFGSLRIRRVLP*LSVTAVTSLSL
Trigger: CAATGACAATGACGTCACCGCTGTAACTGACAGCAATGGCAACACCCTCCGAATCCGAAGGGATCCGAATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp GAGCTTCCGGCCGAATACGTTGACTTTGCCCTGGGCTaGTTCTTTTCGGAATCTCCACTCCACCAGATTCTG +
Preference number: 6 (lower is better)
Translates to: ELPAEYVDFALG*FFSESPLHQIL
Trigger: CAGAATCTGGTGGAGTGGAGATTCCGAAAAGAACAAGCCCAGGGCAAAGTCAACGTATTCGGCCGGAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 90 bp GTCATAGAAGGACTTGGCAGCTTGCTGAGATGGTGTCTGAAGGCTTaGGCTAATGATATCCTGAGGATCAGGCAAGCCACGACAGTAGGG +
Preference number: 6 (lower is better)
Translates to: VIEGLGSLLRWCLKA*ANDILRIRQATTVG
Trigger: CCCTACTGTCGTGGCTTGCCTGATCCTCAGGATATCATTAGCCAAAGCCTTCAGACACCATCTCAGCAAGCTGCCAAGTCCTTCTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 90 bp TGGAGCTGTCCATCGACGTCGTACTCGTACGCGTATTTGGTAGTGTaGGCAAAAGGCCCAATTTTAATCTCTCTCTTGGTTACCCGGCCC +
Preference number: 6 (lower is better)
Translates to: WSCPSTSYSYAYLVV*AKGPILISLLVTRP
Trigger: GGGCCGGGTAACCAAGAGAGAGATTAAAATTGGGCCTTTTGCCAACACTACCAAATACGCGTACGAGTACGACGTCGATGGACAGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 72 bp CGACTCGTACTCGTATCCGACGGACACAACTGCCTCTaGCAAGCCGTAGACTTTCTGATTATATGCGTCCGT +
Preference number: 6 (lower is better)
Translates to: RLVLVSDGHNCL*QAVDFLIICVR
Trigger: ACGGACGCATATAATCAGAAAGTCTACGGCTTGTCAGAGGCAGTTGTGTCCGTCGGATACGAGTACGAGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 72 bp GTTCGAAGTGATGCTGACATCTTCCTCTCTGCTGGATaGCTCGATGTCCACCGTGATAGCCTTGTCCATGTC +
Preference number: 6 (lower is better)
Translates to: VRSDADIFLSAG*LDVHRDSLVHV
Trigger: GACATGGACAAGGCTATCACGGTGGACATCGAGTCATCCAGCAGAGAGGAAGATGTCAGCATCACTTCGAAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 72 bp TTGATCGCGAGGTCAGTGGGCCATTCCAGACGCACCTaGCTGATATGCATGCTAGTATCACAGGTTAAAGGT +
Preference number: 6 (lower is better)
Translates to: LIARSVGHSRRT*LICMLVSQVKG
Trigger: ACCTTTAACCTGTGATACTAGCATGCATATCAGCCAGGTGCGTCTGGAATGGCCCACTGACCTCGCGATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 72 bp GAGCGGTCATGCTTTTCAGACACCCGTTGGTGCCTATaGTCAACCATATCACCTGGTTATCAGGAGACACCA +
Preference number: 6 (lower is better)
Translates to: ERSCFSDTRWCL*STISPGYQETP
Trigger: TGGTGTCTCCTGATAACCAGGTGATATGGTTGACCATAGGCACCAACGGGTGTCTGAAAAGCATGACCGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 72 bp CGGTCCCACATGTCGTATTCGAAGATGTACTGCCGCTaGCTATGGAGCAGAAGAACCATGGACTTTTCCAAG +
Preference number: 6 (lower is better)
Translates to: RSHMSYSKMYCR*LWSRRTMDFSK
Trigger: CTTGGAAAAGTCCATGGTTCTTCTGCTCCATAGCCAGCGGCAGTACATCTTCGAATACGACATGTGGGACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp TCCATGCAGTCAATGAGTCCGTCTCCTTCGTTGTCTTaGCTGTCTGTACAGAGGGTCTCCATGGCTACGTCA +
Preference number: 6 (lower is better)
Translates to: SMQSMSPSPSLS*LSVQRVSMATS
Trigger: TGACGTAGCCATGGAGACCCTCTGTACAGACAGCAAAGACAACGAAGGAGACGGACTCATTGACTGCATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 72 bp AGTTTCAAATCTGTTCCTGGAATTGTGGTTTCTTCATaGAGGACCTGTGTCTCGGGGATGATGGGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: SFKSVPGIVVSS*RTCVSGMMGLS
Trigger: GGACAGCCCCATCATCCCCGAGACACAGGTCCTGCATGAAGAAACCACAATTCCAGGAACAGATTTGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 72 bp AGACTCTTATTGAACGGACTTTCTCCAGGGAGCACGTaGGTGCTATCCGATCCAATCAGGAAACTGATTCGG +
Preference number: 6 (lower is better)
Translates to: RLLLNGLSPGST*VLSDPIRKLIR
Trigger: CCGAATCAGTTTCCTGATTGGATCGGATAGCACCCACGTGCTCCCTGGAGAAAGTCCGTTCAATAAGAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp GCCGTACTGAACAGTGGCGTCGTCCCTGTCCCTGTTTaGAATAGGAAATGCCTGCTTTCCAGTGGTACATTA +
Preference number: 6 (lower is better)
Translates to: AVLNSGVVPVPV*NRKCLLSSGTL
Trigger: TAATGTACCACTGGAAAGCAGGCATTTCCTATTCAAAACAGGGACAGGGACGACGCCACTGTTCAGTACGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp AACATATTTCATTTGAGCAGTCGGGGCCAGTCCAATTaGGGTCGCAAGTGCAGGAGCCGCTTTCTTGAAGGT +
Preference number: 6 (lower is better)
Translates to: NIFHLSSRGQSN*GRKCRSRFLEG
Trigger: ACCTTCAAGAAAGCGGCTCCTGCACTTGCGACCCAAATTGGACTGGCCCCGACTGCTCAAATGAAATATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000110346.9
ENSMUST00000190840.8
CDS TCA 72 bp AGACATTCCAGGGAATCCACACAGTGTGGTACTGAGTaGGGAATGGGGAACGCTCAAATACCAAAGTCAGAG +
Preference number: 6 (lower is better)
Translates to: RHSRESTQCGTE*GMGNAQIPKSE
Trigger: CTCTGACTTTGGTATTTGAGCGTTCCCCATTCCTCACTCAGTACCACACTGTGTGGATTCCCTGGAATGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 72 bp AGACTTTCTGATTATATGCGTCCGTCTTATCCCAGATaGACGTGTAGGCCAAGTTTGGCGAGGCAGGAAACC +
Preference number: 6 (lower is better)
Translates to: RLSDYMRPSYPR*TCRPSLARQET
Trigger: GGTTTCCTGCCTCGCCAAACTTGGCCTACACGTTCATCTGGGATAAGACGGACGCATATAATCAGAAAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 72 bp TTCAGCGTTTTTAGTCAGGTCTTTGGCTCCCGTGAGTaGTTTCGGCCGATAGATTCTGCGGGTGTTAGTATC +
Preference number: 6 (lower is better)
Translates to: FSVFSQVFGSRE*FRPIDSAGVSI
Trigger: GATACTAACACCCGCAGAATCTATCGGCCGAAATCACTCACGGGAGCCAAAGACCTGACTAAAAACGCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 72 bp ACGCTCAAATACCAAAGTCAGAGAAGCGCCACCATTTaGCACCAAGTCAAACATTCCATCCTGGCGGGTAAT +
Preference number: 6 (lower is better)
Translates to: TLKYQSQRSATI*HQVKHSILAGN
Trigger: ATTACCCGCCAGGATGGAATGTTTGACTTGGTGGCAAATGGTGGCGCTTCTCTGACTTTGGTATTTGAGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 72 bp GCTTGTTCTTTTCGGAATCTCCACTCCACCAGATTCTaGCCGTTCTCACCGGGAAGAGTCATGTTTCTTTTG +
Preference number: 6 (lower is better)
Translates to: ACSFRNLHSTRF*PFSPGRVMFLL
Trigger: CAAAAGAAACATGACTCTTCCCGGTGAGAACGGGCAGAATCTGGTGGAGTGGAGATTCCGAAAAGAACAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 72 bp ACGCCAATAAGTGGGGTTCCATCAGCTGTTAGTACTTaGCCTCTGATGACGGACGCAAGACTCTTATTGAAC +
Preference number: 6 (lower is better)
Translates to: TPISGVPSAVST*PLMTDARLLLN
Trigger: GTTCAATAAGAGTCTTGCGTCCGTCATCAGAGGCCAAGTACTAACAGCTGATGGAACCCCACTTATTGGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 72 bp CACATGTCGTATTCGAAGATGTACTGCCGCTGGCTATaGAGCAGAAGAACCATGGACTTTTCCAAGTACGTG +
Preference number: 6 (lower is better)
Translates to: HMSYSKMYCRWL*SRRTMDFSKYV
Trigger: CACGTACTTGGAAAAGTCCATGGTTCTTCTGCTCCATAGCCAGCGGCAGTACATCTTCGAATACGACATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 72 bp CCCCGTGGAATCCAATTACCAGCTGAAAGTCGACGTTaGAGTCAAAGTAGATCTCACCATAGGCAGTGTACT +
Preference number: 6 (lower is better)
Translates to: PRGIQLPAESRR*SQSRSHHRQCT
Trigger: AGTACACTGCCTATGGTGAGATCTACTTTGACTCCAACGTCGACTTTCAGCTGGTAATTGGATTCCACGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp ATCTGTGAGCTGGGTTGCTACTTAGTTCTAAAACACTaGTCACATTCCCAGACGGGAATATCCGCCGGACGT +
Preference number: 6 (lower is better)
Translates to: ICELGCYLVLKH*SHSQTGISAGR
Trigger: ACGTCCGGCGGATATTCCCGTCTGGGAATGTGACAAGTGTTTTAGAACTAAGTAGCAACCCAGCTCACAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000190840.8
CDS CAA 90 bp CGATCCAATCAGGAAACTGATTCGGTCATAGAAGGACTTGGCAGCTaGCTGAGATGGTGTCTGAAGGCTTTGGCTAATGATATCCTGAGG +
Preference number: 6 (lower is better)
Translates to: RSNQETDSVIEGLGS*LRWCLKALANDILR
Trigger: CCTCAGGATATCATTAGCCAAAGCCTTCAGACACCATCTCAGCAAGCTGCCAAGTCCTTCTATGACCGAATCAGTTTCCTGATTGGATCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 90 bp GCACACAGTGCGGTGCACCTCCAGCTGCAGTACTTTGAAGACTTCTaGAATTTAAAAGCACTTCTTGATAGGGTGTTTCTAGGAAGTGGC +
Preference number: 6 (lower is better)
Translates to: AHSAVHLQLQYFEDF*NLKALLDRVFLGSG
Trigger: GCCACTTCCTAGAAACACCCTATCAAGAAGTGCTTTTAAATTCAAGAAGTCTTCAAAGTACTGCAGCTGGAGGTGCACCGCACTGTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000033965.14
ENSMUST00000110343.3
ENSMUST00000110345.8
ENSMUST00000110346.9
ENSMUST00000190840.8
ENSMUST00000211976.2
CDS CAA 72 bp TGGAGCTGTCCATCGACGTCGTACTCGTACGCGTATTaGGTAGTGTTGGCAAAAGGCCCAATTTTAATCTCT +
Preference number: 6 (lower is better)
Translates to: WSCPSTSYSYAY*VVLAKGPILIS
Trigger: AGAGATTAAAATTGGGCCTTTTGCCAACACTACCAAATACGCGTACGAGTACGACGTCGATGGACAGCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp AAATCAAATTTGGGAACAGGGAATCCAGGAATAGCATaGTGCAGATGGAAGCCAAACGTCACCAGCCAGCTG +
Preference number: 6 (lower is better)
Translates to: KSNLGTGNPGIA*CRWKPNVTSQL
Trigger: CAGCTGGCTGGTGACGTTTGGCTTCCATCTGCACAATGCTATTCCTGGATTCCCTGTTCCCAAATTTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 90 bp GTGCTGTCGTATAAAATTTCTGATAGCCTGGTCTGCCTTCTATACTaGAATAAGACCCTCCGACTCGTTCCCAGGAAAGCTGTTTGCAGA +
Preference number: 6 (lower is better)
Translates to: VLSYKISDSLVCLLY*NKTLRLVPRKAVCR
Trigger: TCTGCAAACAGCTTTCCTGGGAACGAGTCGGAGGGTCTTATTCAAGTATAGAAGGCAGACCAGGCTATCAGAAATTTTATACGACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 72 bp GTGAAGAATCATGATCGAAAGCTTTCAAGGTTTCACTaGAACTATAGGACTTCTGCGTGGGGACCCTACACT +
Preference number: 6 (lower is better)
Translates to: VKNHDRKLSRFH*NYRTSAWGPYT
Trigger: AGTGTAGGGTCCCCACGCAGAAGTCCTATAGTTCCAGTGAAACCTTGAAAGCTTTCGATCATGATTCTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
ENSMUST00000211812.2
CDS TCA 72 bp ATAAAATTTCTGATAGCCTGGTCTGCCTTCTATACTTaGATAAGACCCTCCGACTCGTTCCCAGGAAAGCTG +
Preference number: 6 (lower is better)
Translates to: IKFLIAWSAFYT*IRPSDSFPGKL
Trigger: CAGCTTTCCTGGGAACGAGTCGGAGGGTCTTATTCAAGTATAGAAGGCAGACCAGGCTATCAGAAATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 72 bp GGAGGTTTCCATTTAGGTCGTAGTTGTACCGCCACATaGTCTTTTCGTTTAGGTAAACTGTTTGGAGCTGTC +
Preference number: 6 (lower is better)
Translates to: GGFHLGRSCTAT*SFRLGKLFGAV
Trigger: GACAGCTCCAAACAGTTTACCTAAACGAAAAGATCATGTGGCGGTACAACTACGACCTAAATGGAAACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 72 bp TGTCATAATCTCTTTCTCCAAAGTGGATTAGTTTGGTaGGCGGGTCATACAAGCCCCCGTGGAATCCAATTA +
Preference number: 6 (lower is better)
Translates to: CHNLFLQSGLVW*AGHTSPRGIQL
Trigger: TAATTGGATTCCACGGGGGCTTGTATGACCCGCTCACCAAACTAATCCACTTTGGAGAAAGAGATTATGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 72 bp ACTCCTCTTCGAGTTGCGGATTCACACACTCCTAACTaGCTTAGGGTAAAATTCTGTCCTTGTCTAGTATAC +
Preference number: 6 (lower is better)
Translates to: TPLRVADSHTPN*LRVKFCPCLVY
Trigger: GTATACTAGACAAGGACAGAATTTTACCCTAAGGCAGTTAGGAGTGTGTGAATCCGCAACTCGAAGAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
ENSMUST00000211812.2
CDS CCA 72 bp TCTGGAACTCAGGTAGGAAAGTTTCAAATCTGTTCCTaGAATTGTGGTTTCTTCATGCAGGACCTGTGTCTC +
Preference number: 6 (lower is better)
Translates to: SGTQVGKFQICS*NCGFFMQDLCL
Trigger: GAGACACAGGTCCTGCATGAAGAAACCACAATTCCAGGAACAGATTTGAAACTTTCCTACCTGAGTTCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 72 bp CAATCTGGTAACTGTTTCTTAACTGGTCTTGGACCATaGTGTAGAAGGAATCGATGGAGGACAAGTTCGAAG +
Preference number: 6 (lower is better)
Translates to: QSGNCFLTGLGP*CRRNRWRTSSK
Trigger: CTTCGAACTTGTCCTCCATCGATTCCTTCTACACCATGGTCCAAGACCAGTTAAGAAACAGTTACCAGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CCA 72 bp CCTTTCCGATCCTTTTCCAGATTTCAATGTCCGGTGTaGTCCATCTTCCCGCCAAAATGTCATAATCTCTTT +
Preference number: 6 (lower is better)
Translates to: PFRSFSRFQCPV*SIFPPKCHNLF
Trigger: AAAGAGATTATGACATTTTGGCGGGAAGATGGACCACACCGGACATTGAAATCTGGAAAAGGATCGGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp TTCCATTGTCGCCAGAAGGTAACGATACAGTGTTTGTaGGCACGGTGTCAGAATTCACTTTTCCATTCTCGA +
Preference number: 6 (lower is better)
Translates to: FHCRQKVTIQCL*ARCQNSLFHSR
Trigger: TCGAGAATGGAAAAGTGAATTCTGACACCGTGCCAACAAACACTGTATCGTTACCTTCTGGCGACAATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000110346.9
ENSMUST00000190840.8
CDS TCA 72 bp TGCCTGTATCTAATGGTGCAAATAAAACCATCACTCTaGAGGTTTACTGTTTTCAGGACTCCCGCTGTTTCG +
Preference number: 6 (lower is better)
Translates to: CLYLMVQIKPSL*RFTVFRTPAVS
Trigger: CGAAACAGCGGGAGTCCTGAAAACAGTAAACCTTCAGAGTGATGGTTTTATTTGCACCATTAGATACAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS GCA 72 bp CTTGTGCTGTCGTATAAAATTTCTGATAGCCTGGTCTaGCTTCTATACTTGAATAAGACCCTCCGACTCGTT +
Preference number: 6 (lower is better)
Translates to: LVLSYKISDSLV*LLYLNKTLRLV
Trigger: AACGAGTCGGAGGGTCTTATTCAAGTATAGAAGGCAGACCAGGCTATCAGAAATTTTATACGACAGCACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp CTGGTGAGTACCGTTGATGTCAAAGATGTAGAGCTCTaGATCAGTTGGAGAGGCAACTTCGTAAAAGTTCAT +
Preference number: 6 (lower is better)
Translates to: LVSTVDVKDVEL*ISWRGNFVKVH
Trigger: ATGAACTTTTACGAAGTTGCCTCTCCAACTGATCAAGAGCTCTACATCTTTGACATCAACGGTACTCACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp TATAAAATTTCTGATAGCCTGGTCTGCCTTCTATACTaGAATAAGACCCTCCGACTCGTTCCCAGGAAAGCT +
Preference number: 6 (lower is better)
Translates to: YKISDSLVCLLY*NKTLRLVPRKA
Trigger: AGCTTTCCTGGGAACGAGTCGGAGGGTCTTATTCAAGTATAGAAGGCAGACCAGGCTATCAGAAATTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 90 bp CACCTAATTTTCCATTGTCGCCAGAAGGTAACGATACAGTGTTTGTaGGCACGGTGTCAGAATTCACTTTTCCATTCTCGAATGTGTCAT +
Preference number: 6 (lower is better)
Translates to: HLIFHCRQKVTIQCL*ARCQNSLFHSRMCH
Trigger: ATGACACATTCGAGAATGGAAAAGTGAATTCTGACACCGTGCCAACAAACACTGTATCGTTACCTTCTGGCGACAATGGAAAATTAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000110346.9
ENSMUST00000190840.8
CDS CAA 90 bp ATCCACCTAATTTTCCATTGTCGCCAGAAGGTAACGATACAGTGTTaGTTGGCACGGTGTCAGAATTCACTTTTCCATTCTCGAATGTGT +
Preference number: 6 (lower is better)
Translates to: IHLIFHCRQKVTIQC*LARCQNSLFHSRMC
Trigger: ACACATTCGAGAATGGAAAAGTGAATTCTGACACCGTGCCAACAAACACTGTATCGTTACCTTCTGGCGACAATGGAAAATTAGGTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000110346.9
ENSMUST00000190840.8
CDS GCA 72 bp CCATTCTCGAATGTGTCATTTTCCGTCTGCTGTAAGTaGCAGTTGAGGCCAAATAGATGCATTGCTATAAAA +
Preference number: 6 (lower is better)
Translates to: PFSNVSFSVCCK*QLRPNRCIAIK
Trigger: TTTTATAGCAATGCATCTATTTGGCCTCAACTGGCACTTACAGCAGACGGAAAATGACACATTCGAGAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000033965.14
ENSMUST00000110346.9
ENSMUST00000190840.8
ENSMUST00000211976.2
CDS CAA 72 bp ATTTTCCATTGTCGCCAGAAGGTAACGATACAGTGTTaGTTGGCACGGTGTCAGAATTCACTTTTCCATTCT +
Preference number: 6 (lower is better)
Translates to: IFHCRQKVTIQC*LARCQNSLFHS
Trigger: AGAATGGAAAAGTGAATTCTGACACCGTGCCAACAAACACTGTATCGTTACCTTCTGGCGACAATGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000110346.9
ENSMUST00000190840.8
CDS CAA 72 bp CTTGATCAGTTGGAGAGGCAACTTCGTAAAAGTTCATaGAGTTCAGTAAAGGTTTATTCTTCGAAACGGCCC +
Preference number: 6 (lower is better)
Translates to: LDQLERQLRKSS*SSVKVYSSKRP
Trigger: GGGCCGTTTCGAAGAATAAACCTTTACTGAACTCAATGAACTTTTACGAAGTTGCCTCTCCAACTGATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS CAA 72 bp GTGCTTTGTATAAGTCATCACGGCCGTGGAAATGATTaGGTTGATGTCGTAGTATATCACTCCGAATTTTCC +
Preference number: 6 (lower is better)
Translates to: VLCISHHGRGND*VDVVVYHSEFS
Trigger: GGAAAATTCGGAGTGATATACTACGACATCAACCAAATCATTTCCACGGCCGTGATGACTTATACAAAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
CDS TCA 72 bp GACCAAATCCTTTACTCTGTTTCCATAAAGCAGCCGTaGAGAATCATGATCGAAAGCTTTCAAGGTTTCACT +
Preference number: 6 (lower is better)
Translates to: DQILYSVSIKQP*RIMIESFQGFT
Trigger: AGTGAAACCTTGAAAGCTTTCGATCATGATTCTTCACGGCTGCTTTATGGAAACAGAGTAAAGGATTTGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000190840.8
ENSMUST00000211812.2
CDS CCA 72 bp ATCCTTCTGAAGAGAGATGTTGAACTTAAGAAACTGTaGCTGATCAATAAAGAGCTGCGATCTCCAGAAGAT +
Preference number: 6 (lower is better)
Translates to: ILLKRDVELKKL*LINKELRSPED
Trigger: ATCTTCTGGAGATCGCAGCTCTTTATTGATCAGCCACAGTTTCTTAAGTTCAACATCTCTCTTCAGAAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000033965.14
ENSMUST00000110346.9
ENSMUST00000190840.8