RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TENM2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000049336

Ensembl transcript IDs: ENSMUST00000057207.6, ENSMUST00000102801.8, ENSMUST00000163524.8

Found 830 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATTTGCTTAAACGAAAACGTCGCAATGTTTGTCCAACTGTCAGTCTaGGTTGTCCTCAGCTGGTCTGGTGATGCCGGCCCTTGTGAATGT +
Preference number: 1 (lower is better)
Translates to: ICLNENVAMFVQLSV*VVLSWSGDAGPCEC
Trigger: ACATTCACAAGGGCCGGCATCACCAGACCAGCTGAGGACAACTCAGACTGACAGTTGGACAAACATTGCGACGTTTTCGTTTAAGCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
3UTR TCA 90 bp TTTCTGGACCAAACAAACACACTAATAATTTTAAGTCTGAAACAGTaGTTGCGCCTTACGGCATATGTATGTACAGGGCGATCGGAAGTG +
Preference number: 1 (lower is better)
Translates to: FLDQTNTLIILSLKQ*LRLTAYVCTGRSEV
Trigger: CACTTCCGATCGCCCTGTACATACATATGCCGTAAGGCGCAATCACTGTTTCAGACTTAAAATTATTAGTGTGTTTGTTTGGTCCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
3UTR-3UTR GCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGCAGCCCGGCCTCAGTaGCCCGTTAGGTCTTCGTCT +
Preference number: 2 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLAARPQ*PVRSSS
Trigger: AGACGAAGACCTAACGGGGCACTGAGGCCGGGCTGC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
3UTR-3UTR GCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGCAGCCCGGCCTCAGTaGCCCGTTAGGTCTTCGTCT +
Preference number: 2 (lower is better)
Translates to: PFLLAILRLFSALDPEQVAARPQ*PVRSSS
Trigger: AGACGAAGACCTAACGGGGCACTGAGGCCGGGCTGC...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
3UTR-3UTR TCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACACAGTTGCTCCTGCTaGGCCACCCAGAGAAGAGGT +
Preference number: 2 (lower is better)
Translates to: SVPFLLAILRLFSALDPEHSCSC*ATQRRG
Trigger: ACCTCTTCTCTGGGTGGCTCAGCAGGAGCAACTGTG...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
3UTR-3UTR CCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTAGCTTTCTTGCCACTTaGGATCCTAAAGCAGCCCGG +
Preference number: 2 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLSFLAT*DPKAAR
Trigger: CCGGGCTGCTTTAGGATCCCAAGTGGCAAGAAAGCT...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
3UTR-3UTR TCA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCACACAGTTGCTCCTGCTaGGCCACCCAGAGAAGAGGT +
Preference number: 2 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPHSCSC*ATQRRG
Trigger: ACCTCTTCTCTGGGTGGCTCAGCAGGAGCAACTGTG...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
3UTR-3UTR TCA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATTTTCTCTCCTCGTGGTaGCTGTCATGTGATTGTCTC +
Preference number: 2 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANFLSSW*LSCDCL
Trigger: GAGACAATCACATGACAGTCACCACGAGGAGAGAAA...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
3UTR-3UTR CCA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCACTGTTCCTTTCCTTTTaGCTATTCTGCGTCTCTTTT +
Preference number: 2 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPLFLSF*LFCVSF
Trigger: AAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAG...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
3UTR TCA 72 bp AACGAAAACGTCGCAATGTTTGTCCAACTGTCAGTCTaGGTTGTCCTCAGCTGGTCTGGTGATGCCGGCCCT +
Preference number: 3 (lower is better)
Translates to: NENVAMFVQLSV*VVLSWSGDAGP
Trigger: AGGGCCGGCATCACCAGACCAGCTGAGGACAACTCAGACTGACAGTTGGACAAACATTGCGACGTTTTCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
3UTR TCA 72 bp GCAACAGAGTCACAAATGTTGCATCTCTACCGCAACTaGTACCCACAAACTACGGATTCTAAACAGACTACA +
Preference number: 3 (lower is better)
Translates to: ATESQMLHLYRN*YPQTTDSKQTT
Trigger: TGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGCGGTAGAGATGCAACATTTGTGACTCTGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
3UTR GCA 72 bp CAAACTACGGATTCTAAACAGACTACACCCTGTAACTaGGTATTACTGTCCACAATGGAATCTCCAAAGACA +
Preference number: 3 (lower is better)
Translates to: QTTDSKQTTPCN*VLLSTMESPKT
Trigger: TGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
3UTR TCA 72 bp CTGTCCACAATGGAATCTCCAAAGACAAAAAGATTATaGGATTTATGTGTAGTGAGTATAGCCACCATTTTG +
Preference number: 3 (lower is better)
Translates to: LSTMESPKTKRL*DLCVVSIATIL
Trigger: CAAAATGGTGGCTATACTCACTACACATAAATCTCATAATCTTTTTGTCTTTGGAGATTCCATTGTGGACAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACGCAGGTGGCGGGGCATaGCACTGCTGTCCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHAGGGA*HCCPGG
Trigger: TCCGCCGGGACAGCAGTGGCATGCCCCGCCACCTGC...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCATGGCCCCTCGCTaGAGGCCGGCCAAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRLMAPR*RPAKRP
Trigger: TGGGCGCTTGGCCGGCCTCCAGCGAGGGGCCATGAG...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTTCGCCAGCTCACAGTTaGGACCACCCCAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRSPAHS*DHPSRG
Trigger: GCCCCGGCTGGGGTGGTCTCAACTGTGAGCTGGCGA...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACCCCGTGCTCAGGAGTTaGTGCTTCTCGCCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHPVLRS*CFSPSV
Trigger: GACGGAGGGCGAGAAGCAGCAACTCCTGAGCACGGG...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACGTGCCTGCGAGGACGTaGGGCTCACTGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHVPART*GSLWKL
Trigger: CAGCTTCCACAGTGAGCCCCACGTCCTCGCAGGCAC...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTGTCCTCTCGCTCATaGCCCCTCGCTGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRLSSRS*PLAGGR
Trigger: CCGGCCTCCAGCGAGGGGCCATGAGCGAGAGGACAG...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACAGGGGGCCTCAGTGTTaGCTGGCTGTGGTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHRGPQC*LAVVVW
Trigger: CCAAACCACCACAGCCAGTCAACACTGAGGCCCCCT...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACGCTGGGGCGTGGATTTaGCTCCGCCGATTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHAGAWI*LRRLVS
Trigger: ACTGACCAATCGGCGGAGTCAAATCCACGCCCCAGC...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACCGCAGTTCCCATCAATaGAGGAGCCATGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHRSSHQ*RSHGPH
Trigger: GTGGGGGCCATGGCTCCTGCATTGATGGGAACTGCG...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACGGGTCTCAGGCACAATaGGGTTCGAGGCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHGSQAQ*GSRQGK
Trigger: CTTCCCCTGCCTCGAACCCCATTGTGCCTGAGACCC...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACACGTGGGGCTCACTGTaGAAGCTGACAGCCATGCCG +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHTWGSL*KLTAMP
Trigger: CGGCATGGCTGTCAGCTTCCACAGTGAGCCCCACGT...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACCAATGGAGGTGTGCGTaGACATGCTGTGCCGGGCGA +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHQWRCA*TCCAGR
Trigger: TCGCCCGGCACAGCATGTCCACGCACACCTCCATTG...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCCGTCCCTGGCTTTCTaGTGCTCCTTGGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRPSLAF*CSLAQA
Trigger: TGCCTGGGCCAAGGAGCAGCAGAAAGCCAGGGACGG...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACGGCCTCAGTGTTGACTaGCTGTGGTGGTTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHGLSVD*LWWFGG
Trigger: CCCTCCAAACCACCACAGCCAGTCAACACTGAGGCC...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACGAGCTGAACAGACTCTaGGGTGGTGGCCAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHELNRL*GGGQVV
Trigger: AACGACCTGGCCACCACCCCAGAGTCTGTTCAGCTC...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCCCACTACACTGGTCTaGGCACTGGACCCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRPTTLV*ALDPRQ
Trigger: CTGGCGAGGGTCCAGTGCCCAGACCAGTGTAGTGGG...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACTCAGTGAGTTCCTGTTaGGGGAGTTGGCCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHSVSSC*GSWPRS
Trigger: ACTCCTCGGCCAACTCCCTCAACAGGAACTCACTGA...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCACTGCCAGCTGTTCTaGCCCAGTGTGCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRHCQLF*PSVHLP
Trigger: CGGGAGATGCACACTGGGTCAGAACAGCTGGCAGTG...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTGTGGTCGGACAGCTGTaGGGTCATTGGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRVVGQL*GHWSPA
Trigger: TGCTGGGCTCCAATGACCTCACAGCTGTCCGACCAC...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACCCGCCGACCAACTTCTaGTTCGCCACTGTCTATGCT +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHPPTNF*FATVYA
Trigger: AGCATAGACAGTGGCGAAGCAGAAGTTGGTCGGCGG...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACACTGTCCATTTCCGCTaGACAGTACAGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHTVHFR*TVQGRQ
Trigger: CTGCCTGCCCTGTACTGTGCAGCGGAAATGGACAGT...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACTTCTCCATTTCCCGGTaGAGACTGGTCACTACGCCC +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHFSISR*RLVTTP
Trigger: GGGCGTAGTGACCAGTCTGCACCGGGAAATGGAGAA...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACGTTGCTGCTACTGTCTaGCAGCTCCGGGTACTGTTC +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHVAATV*QLRVLF
Trigger: GAACAGTACCCGGAGCTGGCAGACAGTAGCAGCAAC...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACTGTCCATCTGCCGGCTaGAGTTGCCAATTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHCPSAG*SCQLSP
Trigger: CGGACTCAATTGGCAACTCCAGCCGGCAGATGGACA...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACTCTCCAGGAATGATGTaGGTGCTGTCCTTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHSPGMM*VLSLPA
Trigger: GGCAGGCAAGGACAGCACCCACATCATTCCTGGAGA...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCAATGGAGGTGTGCGTaGACATGCTGTGCCGGGCGA +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRQWRCA*TCCAGR
Trigger: TCGCCCGGCACAGCATGTCCACGCACACCTCCATTG...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTGCCCTGAGCATGCTCTaGGCAGGTATGAATTGGGGG +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRALSML*AGMNWG
Trigger: CCCCCAATTCATACCTGCTCAGAGCATGCTCAGGGC...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCGCTCAGAGACTTaGCTCGGTAGATTCGGCGAC +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRLRSET*LGRFGD
Trigger: GTCGCCGAATCTACCGAGTCAAGTCTCTGAGCGGAG...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACTCCCATCATAAGTCATaGGGCCCAGCTCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHSHHKS*GPAPGS
Trigger: AGAACCTGGAGCTGGGCCTCATGACTTATGATGGGA...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACAGTGCCACAGTCTACTaGGCACACAACAGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHSATVY*AHNRAV
Trigger: GACTGCTCTGTTGTGTGCTCAGTAGACTGTGGCACT...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCGGTGTCCGAGTCTaGATCAGACCCAGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRLGVRV*IRPSAQ
Trigger: CTGAGCACTGGGTCTGATGCAGACTCGGACACCGAG...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTGAGCTGAACAGACTCTaGGGTGGTGGCCAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRELNRL*GGGQVV
Trigger: AACGACCTGGCCACCACCCCAGAGTCTGTTCAGCTC...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTTCAATGCAGGAGCCATaGCCCCCACAGGAAGGATCG +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRSMQEP*PPQEGS
Trigger: CGATCCTTCCTGTGGGGGCCATGGCTCCTGCATTGA...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTCCTCAGCTGGTCTGGTGATGCCGGCCCTTGTGAATGTCTTTGTGTTGCTCACCCCACTACACTGGTCTaGGCACTGGACCCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: VLSWSGDAGPCECLCVAHPTTLV*ALDPRQ
Trigger: CTGGCGAGGGTCCAGTGCCCAGACCAGTGTAGTGGG...GTGAGCAACACAAAGACATTCACAAGGGCCGGCATCACCAGACCAGCTGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCGCAGGAGGTTTCCATaGCAACGTTGCATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRRRRFP*QRCIQA
Trigger: GGCCTGGATGCAACGTTGCCATGGAAACCTCCTGCG...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACTGCCATCCTGGCGAGTaGTGGTGTAGCCATATTTTG +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHCHPGE*WCSHIL
Trigger: CAAAATATGGCTACACCATCACTCGCCAGGATGGCA...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACGGTTGTAAACATGGGTaGTACGTGTGGGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHGCKHG*YVWGCG
Trigger: TCCACAACCCCACACGTATCACCCATGTTTACAACC...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTCCTCAGCTGGTCTGGTGATGCCGGCCCTTGTGAATGTCTTTGTGTTGCTCACTGCCACACCGTCCCCTaGTCAAAGAGCGATGTCGCC +
Preference number: 4 (lower is better)
Translates to: VLSWSGDAGPCECLCVAHCHTVP*SKSDVA
Trigger: GGCGACATCGCTCTTTGACCAGGGGACGGTGTGGCA...GTGAGCAACACAAAGACATTCACAAGGGCCGGCATCACCAGACCAGCTGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCTGGTGGCCAGGTCGTTaGGCGCAGGAGCTGGGGCGT +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCWWPGR*AQELGR
Trigger: ACGCCCCAGCTCCTGCGCCCAACGACCTGGCCACCA...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTTCTCCAGGAATGATGTaGGTGCTGTCCTTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRSPGMM*VLSLPA
Trigger: GGCAGGCAAGGACAGCACCCACATCATTCCTGGAGA...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTACCAGCCTCCAAGGTTaGAAGGGTCCAGCTCGAATC +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRTSLQG*KGPARI
Trigger: GATTCGAGCTGGACCCTTCCAACCTTGGAGGCTGGT...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACTTCACATTGAGGGTGTaGTGTTTGTCCAGGGACCAG +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHFTLRV*CLSRDQ
Trigger: CTGGTCCCTGGACAAACACCACACCCTCAATGTGAA...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTGCACGCTCCATCCGCTaGCCTTGTTGTATGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRARSIR*PCCMLL
Trigger: CAAGAGCATACAACAAGGCCAGCGGATGGAGCGTGC...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTCCTCAGCTGGTCTGGTGATGCCGGCCCTTGTGAATGTCTTTGTGTTGCTCACGGGGCTCGCTCAAAGTaGAGAGTCAAGGCAGAACCC +
Preference number: 4 (lower is better)
Translates to: VLSWSGDAGPCECLCVAHGARSK*RVKAEP
Trigger: GGGTTCTGCCTTGACTCTTCACTTTGAGCGAGCCCC...GTGAGCAACACAAAGACATTCACAAGGGCCGGCATCACCAGACCAGCTGAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGAGTTGTCCATGGGGTTaGCGGCGAGGTCTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQSCPWG*RRGLSA
Trigger: GGCCGACAGACCTCGCCGTCAACCCCATGGACAACT...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACAGACTCACAGTGTACTaGTGGATACCATCAGCGTTG +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHRLTVY*WIPSAL
Trigger: CAACGCTGATGGTATCCATCAGTACACTGTGAGTCT...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACTCTGATGGGAGGTGTTaGTGTCTAGCAATGGCATCT +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHSDGRC*CLAMAS
Trigger: AGATGCCATTGCTAGACAGCAACACCTCCCATCAGA...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCAGCACCAGAGTCTGGATaGTCCGGCGTTCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSAPESG*SGVPWA
Trigger: CGCCCAGGGAACGCCGGAGCATCCAGACTCTGGTGC...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTTGTTCTGACCCAGTGTaGATCTCCCGTTACCGTTGC +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRCSDPV*ISRYRC
Trigger: GCAACGGTAACGGGAGATGCACACTGGGTCAGAACA...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGCAGGTGGCGGGGCATaGCACTGCTGTCCCGGCGGA +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQAGGGA*HCCPGG
Trigger: TCCGCCGGGACAGCAGTGGCATGCCCCGCCACCTGC...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTGGCAGCTAACTGGTaGAGGATTATGGGAGCTAGG +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRLAANW*RIMGAR
Trigger: CCTAGCTCCCATAATCCTCCACCAGTTAGCTGCCAG...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGCTGCTGGAGGCTTGCTaGGGCCCTGAGCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQLLEAC*GPEHAL
Trigger: CAGAGCATGCTCAGGGCCCCAGCAAGCCTCCAGCAG...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCTCCGGCGTTCCCTaGGCGACTCGACCACGCTCC +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLCSGVP*ATRPRS
Trigger: GGAGCGTGGTCGAGTCGCCCAGGGAACGCCGGAGCA...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTAGGGAGTCCCATCCATaGTTACTACTTGGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRRESHP*LLLGLG
Trigger: TCCGAGGCCAAGTAGTAACCATGGATGGGACTCCCT...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACATGTGTAGGCTAGGTTaGGAGAAGCCTGGAATGACT +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHMCRLG*EKPGMT
Trigger: AGTCATTCCAGGCTTCTCCCAACCTAGCCTACACAT...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGTCAGGCATGAGCAGGTaGCGGGGCATGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQSGMSR*RGMPLL
Trigger: CAGCAGTGGCATGCCCCGCCACCTGCTCATGCCTGA...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGGTGCCTGCGAGGACGTaGGGCTCACTGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQVPART*GSLWKL
Trigger: CAGCTTCCACAGTGAGCCCCACGTCCTCGCAGGCAC...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAACTCATGGCCCCTCGCTaGAGGCCGGCCAAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQLMAPR*RPAKRP
Trigger: TGGGCGCTTGGCCGGCCTCCAGCGAGGGGCCATGAG...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCACTACTGCTCTCCATaGCAAATAGGTGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRHYCSP*QIGGPG
Trigger: TCCAGGGCCACCTATTTGCCATGGAGAGCAGTAGTG...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTGTGGTAGCAAACCAGTaGCCTGCTTTCTCTCGGATG +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRVVANQ*PAFSRM
Trigger: CATCCGAGAGAAAGCAGGCCACTGGTTTGCTACCAC...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGCATTCGCCGTTCCCGTaGCAGTTCCGTGGACAGTCC +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQHSPFP*QFRGQS
Trigger: GGACTGTCCACGGAACTGTCACGGGAACGGCGAATG...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGGTGGTCGGACAGCTGTaGGGTCATTGGAGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQVVGQL*GHWSPA
Trigger: TGCTGGGCTCCAATGACCTCACAGCTGTCCGACCAC...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTCCTCAGCTGGTCTGGTGATGCCGGCCCTTGTGAATGTCTTTGTGTTGCTCACAGCAATGGCGCTGGCTaGTTCCAGCGCAGAATGGAT +
Preference number: 4 (lower is better)
Translates to: VLSWSGDAGPCECLCVAHSNGAG*FQRRMD
Trigger: ATCCATTCTGCGCTGGAATCAGCCAGCGCCATTGCT...GTGAGCAACACAAAGACATTCACAAGGGCCGGCATCACCAGACCAGCTGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTGGTTGTAAACATGGGTaGTACGTGTGGGGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRGCKHG*YVWGCG
Trigger: TCCACAACCCCACACGTATCACCCATGTTTACAACC...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTCAGCAGCGTGGGCTGTaGCACCGTCACGTTCACCCC +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLQQRGL*HRHVHP
Trigger: GGGGTGAACGTGACGGTGTCACAGCCCACGCTGCTG...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTTTGGAGGGCCACTaGTGGAGGCTTGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVGLEGH*WRLAGA
Trigger: GGCCCCAGCAAGCCTCCAGCAGTGGCCCTCCAAACC...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACCAGCGCATTTCCAACTaGAGTATTTGGAGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHQRISN*SIWRVS
Trigger: AGAAACCCTCCAAATACTGCAGTTGGAAATGCGCTG...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTCCTCAGCTGGTCTGGTGATGCCGGCCCTTGTGAATGTCTTTGTGTTGCTCACTCTGCCGGCTGGAGTTaGCAATTGAGTCCGAGCAGA +
Preference number: 4 (lower is better)
Translates to: VLSWSGDAGPCECLCVAHSAGWS*QLSPSR
Trigger: TCTGCTCGGACTCAATTGGCAACTCCAGCCGGCAGA...GTGAGCAACACAAAGACATTCACAAGGGCCGGCATCACCAGACCAGCTGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp GTCCTCAGCTGGTCTGGTGATGCCGGCCCTTGTGAATGTCTTTGTGTTGCTCACACTGTCCATTTCCGCTaGACAGTACAGGGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: VLSWSGDAGPCECLCVAHTVHFR*TVQGRQ
Trigger: CTGCCTGCCCTGTACTGTGCAGCGGAAATGGACAGT...GTGAGCAACACAAAGACATTCACAAGGGCCGGCATCACCAGACCAGCTGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAGGCAGGCTCCCCCGATaGAGACGCCGTGAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPEGRLPR*RRRECH
Trigger: GTGGCACTCACGGCGTCTGCATCGGGGGAGCCTGCC...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCAGCGCTGGTCACAAGCTaGGCCTGTCCAGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSALVTS*ACPALF
Trigger: GAAGAGGGCTGGACAGGCGCAGCTTGTGACCAGCGC...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTTTGTTCGCCAGTCCCTaGCACAACTTCCGAATTTCC +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRLFASP*HNFRIS
Trigger: GGAAATTCGGAAGTTGTGGCAGGGACTGGCGAACAA...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACGGCTGCCAGCCCACTaGTCGGGAGCCACAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPERLPAH*SGATGR
Trigger: CCTTCCTGTGGCTCCCGAGCAGTGGGCTGGCAGCCG...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCACCGTCCCTGGCTTTCTaGTGCTCCTTGGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSPSLAF*CSLAQA
Trigger: TGCCTGGGCCAAGGAGCAGCAGAAAGCCAGGGACGG...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCACTGGCTGTGGTGGTTTaGAGGGCCACTGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSLAVVV*RATAGG
Trigger: GCCTCCAGCAGTGGCCCTCCAAACCACCACAGCCAG...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACGAAGGATCGATACATTaGTTCATAGGCACATCGCAC +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHEGSIH*FIGTSH
Trigger: GTGCGATGTGCCTATGAACCAATGTATCGATCCTTC...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTCCTCAGCTGGTCTGGTGATGCCGGCCCTTGTGAATGTCTTTGTGTTGCTCACATGATGCTGACCTGGTaGTTCTCCGTGATCCGCAGG +
Preference number: 4 (lower is better)
Translates to: VLSWSGDAGPCECLCVAHMMLTW*FSVIRR
Trigger: CCTGCGGATCACGGAGAACCACCAGGTCAGCATCAT...GTGAGCAACACAAAGACATTCACAAGGGCCGGCATCACCAGACCAGCTGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp GTCCTCAGCTGGTCTGGTGATGCCGGCCCTTGTGAATGTCTTTGTGTTGCTCACGGTCTGCAATGTAGATaGTGCCATCTGGAGCCACGG +
Preference number: 4 (lower is better)
Translates to: VLSWSGDAGPCECLCVAHGLQCR*CHLEPR
Trigger: CCGTGGCTCCAGATGGCACCATCTACATTGCAGACC...GTGAGCAACACAAAGACATTCACAAGGGCCGGCATCACCAGACCAGCTGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACGATGCAGCCTCATACTaGTTGAATGCGTTAAGAACG +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHDAASY*LNALRT
Trigger: CGTTCTTAACGCATTCAACCAGTATGAGGCTGCATC...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCATTTCCCGGTGCAGACTaGTCACTACGCCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSFPGAD*SLRPWG
Trigger: GCCCCACGGGCGTAGTGACCAGTCTGCACCGGGAAA...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGCAGCTATCCTGGAGCTaGACAGACTCTGGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQQLSWS*TDSGVV
Trigger: CACCACCCCAGAGTCTGTTCAGCTCCAGGATAGCTG...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCCCGGAGAAGAGCTGCTaGACAGGGGTGTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCPEKSC*TGVCFQ
Trigger: CTGGAAGCACACCCCTGTTCAGCAGCTCTTCTCCGG...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCCATTCGCCGTTCCCGTaGCAGTTCCGTGGACAGTCC +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCHSPFP*QFRGQS
Trigger: GGACTGTCCACGGAACTGTCACGGGAACGGCGAATG...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGTCGCCAGCTCACAGTTaGGACCACCCCAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRSPAHS*DHPSRG
Trigger: GCCCCGGCTGGGGTGGTCTCAACTGTGAGCTGGCGA...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCCACTGCCAGCTGTTCTaGCCCAGTGTGCATCTCCCG +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCHCQLF*PSVHLP
Trigger: CGGGAGATGCACACTGGGTCAGAACAGCTGGCAGTG...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTCCTCAGCTGGTCTGGTGATGCCGGCCCTTGTGAATGTCTTTGTGTTGCTCACTGCCTGCCAAGAGCTTaGTGCGGTCATAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: VLSWSGDAGPCECLCVAHCLPRA*CGHRRT
Trigger: AGTCCTTCTATGACCGCATCAAGCTCTTGGCAGGCA...GTGAGCAACACAAAGACATTCACAAGGGCCGGCATCACCAGACCAGCTGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGCCGGACAAAGCCACTaGGGTCACAGCTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVAGQSH*GHSWGW
Trigger: CCATCCCCAGCTGTGACCTCAGTGGCTTTGTCCGGC...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTACAGCAACCATCAAGTaGACCCTGATGAGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRTATIK*TLMRFK
Trigger: CTTGAACCTCATCAGGGTTCACTTGATGGTTGCTGT...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTACCTCTGGGGCTCATaGGGGTGGCGTCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLYLWGS*GWRPQP
Trigger: AGGCTGTGGACGCCACCCTCATGAGCCCCAGAGGTA...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAACAGCAGCGTGGGCTGTaGCACCGTCACGTTCACCCC +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQQQRGL*HRHVHP
Trigger: GGGGTGAACGTGACGGTGTCACAGCCCACGCTGCTG...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGGCCGTAGCGGATACTaGGCAGCAGCGTGGAGTACT +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCGRSGY*AAAWST
Trigger: AGTACTCCACGCTGCTGCTCAGTATCCGCTACGGCC...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTCCACTGCTGGAGGCTTaGTGGGGCCCTGAGCATGCT +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLPLLEA*WGPEHA
Trigger: AGCATGCTCAGGGCCCCAGCAAGCCTCCAGCAGTGG...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGGGTTTGGAGGGCCACTaGTGGAGGCTTGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: ATDTHKLRILNRLHPVTAGLEGH*WRLAGA
Trigger: GGCCCCAGCAAGCCTCCAGCAGTGGCCCTCCAAACC...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGGCAGGCTCCCCCGATaGAGACGCCGTGAGTGCCAC +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRGRLPR*RRRECH
Trigger: GTGGCACTCACGGCGTCTGCATCGGGGGAGCCTGCC...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGCGCTGGTCACAAGCTaGGCCTGTCCAGCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVALVTS*ACPALF
Trigger: GAAGAGGGCTGGACAGGCGCAGCTTGTGACCAGCGC...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCGGCATTCACATTTaGCATCTTTACAGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRLGIHI*HLYRSR
Trigger: ACGGGACCTGTAAAGATGGCAAATGTGAATGCCGAG...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGCGGGGCATGCCACTaGTGTCCCGGCGGATCTTTA +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVGGACH*CPGGSL
Trigger: TAAAGATCCGCCGGGACAGCAGTGGCATGCCCCGCC...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAGGGGGTGATGGTGCCTaGGAGGACGTGGGGCTCACT +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPEGGDGA*EDVGLT
Trigger: AGTGAGCCCCACGTCCTCGCAGGCACCATCACCCCC...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGGGGGTGATGGTGCCTaGGAGGACGTGGGGCTCACT +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQGGDGA*EDVGLT
Trigger: AGTGAGCCCCACGTCCTCGCAGGCACCATCACCCCC...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCTGCGTGGACATGCTGTaGCGGGCGACACTGGGCATA +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCCVDML*RATLGI
Trigger: TATGCCCAGTGTCGCCCGGCACAGCATGTCCACGCA...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGAGCCAGAGCTGCGCCTaGATTTTATCCCTCGTCCCC +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQSQSCA*ILSLVP
Trigger: GGGGACGAGGGATAAAATCCAGGCGCAGCTCTGGCT...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACCGAGTTCTCGCGGCTaGACAAGCCAGAGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPEPSSRG*TSQSCA
Trigger: GGCGCAGCTCTGGCTTGTCCAGCCGCGAGAACTCGG...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGCTGCTGGAGGCTTGCTaGGGCCCTGAGCATGCTCTG +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVLLEAC*GPEHAL
Trigger: CAGAGCATGCTCAGGGCCCCAGCAAGCCTCCAGCAG...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGAGTTGGCCGAGGAGTaGTGGTGGGACAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLELAEE*WWDRVW
Trigger: CCACACCCTGTCCCACCACCACTCCTCGGCCAACTC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGAGTTGGCCGAGGAGTaGTGGTGGGACAGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVELAEE*WWDRVW
Trigger: CCACACCCTGTCCCACCACCACTCCTCGGCCAACTC...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGAACAGACTCTGGGGTaGTGGCCAGGTCGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLEQTLG*WPGRWA
Trigger: CGCCCAACGACCTGGCCACCACCCCAGAGTCTGTTC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGCACTGGTCTGGGCACTaGACCCTCGCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVHWSGH*TLASSQ
Trigger: CTGTGAGCTGGCGAGGGTCCAGTGCCCAGACCAGTG...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAGGGTGGCACACGCGCTaGTCACAAGCTGCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPEGWHTR*SQAAPV
Trigger: GACAGGCGCAGCTTGTGACCAGCGCGTGTGCCACCC...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCCACCTTCCGGATCATaGTGGCATCAACAAAGTACA +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRPPSGS*WHQQST
Trigger: TGTACTTTGTTGATGCCACCATGATCCGGAAGGTGG...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTGAGATGATTCCGTTTTaGTCCACCTTCCGGATCATG +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLREMIPF*STFRIM
Trigger: CATGATCCGGAAGGTGGACCAAAACGGAATCATCTC...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGCGAGTCACAGCTCAGTaGTCGGACAGCTGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQRVTAQ*SDSCEV
Trigger: GACCTCACAGCTGTCCGACCACTGAGCTGTGACTCG...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCGTCATCATCCCGGTTaGAGTTCTCAATGTCAATGG +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRRHHPG*SSQCQW
Trigger: CCATTGACATTGAGAACTCCAACCGGGATGATGACG...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTGGTGGCCCAGGTTaGTCTTGTAGGAAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVGGGPG*SCRKPG
Trigger: GCCGGGCTTCCTACAAGACCAACCTGGGCCACCACC...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACGACCATCTGGAAGTCTaGATTGGAGTCATAGTAGAT +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHDHLEV*IGVIVD
Trigger: ATCTACTATGACTCCAATCCAGACTTCCAGATGGTC...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTCTCTGTCTCGCTTaGTCCAGGACGCGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCALCLA*SRTRAF
Trigger: AAAGGCCCGCGTCCTGGACCAAGCGAGACAGAGAGC...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCCCTCTCTCCCGTCCCTaGCTTTCTGCTGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCPLSRP*LSAAPW
Trigger: CCAAGGAGCAGCAGAAAGCCAGGGACGGGAGAGAGG...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGCCGCCGATTGGTCAGTaGGTTCCTGTTGAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQPPIGQ*VPVEGV
Trigger: AACTCCCTCAACAGGAACTCACTGACCAATCGGCGG...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGCCGGAGAAGAGCTGCTaGACAGGGGTGTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVPEKSC*TGVCFQ
Trigger: CTGGAAGCACACCCCTGTTCAGCAGCTCTTCTCCGG...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGGCCGGACAAAGCCACTaGGGTCACAGCTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: ATDTHKLRILNRLHPVTAAGQSH*GHSWGW
Trigger: CCATCCCCAGCTGTGACCTCAGTGGCTTTGTCCGGC...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGGTCAGAGACGTAGAGTaGGCCGGTCACGGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: ATDTHKLRILNRLHPVTAVRDVE*AGHGVH
Trigger: GTGGACCCCGTGACCGGCTCACTCTACGTCTCTGAC...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTCAGAGACGTAGAGTaGGCCGGTCACGGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQVRDVE*AGHGVH
Trigger: GTGGACCCCGTGACCGGCTCACTCTACGTCTCTGAC...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGCCCCACTTTGGAGATTaGCCATCTTCAGGACACCGG +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQPHFGD*PSSGHR
Trigger: CCGGTGTCCTGAAGATGGTCAATCTCCAAAGTGGGG...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGGGTGCAGGTTCCCATTaGGGTCATAGCTATAGCGCC +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQGAGSH*GHSYSA
Trigger: GGCGCTATAGCTATGACCTCAATGGGAACCTGCACC...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCACTGCATCAGACCCAGTaGTCAGGGAGTAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSLHQTQ*SGSSPG
Trigger: ACCAGGGCTACTCCCTGAGCACTGGGTCTGATGCAG...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCCTCGGTGTCCGAGTCTaGATCAGACCCAGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCLGVRV*IRPSAQ
Trigger: CTGAGCACTGGGTCTGATGCAGACTCGGACACCGAG...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCAGCGCATTTCCAACTaGAGTATTTGGAGGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRQRISN*SIWRVS
Trigger: AGAAACCCTCCAAATACTGCAGTTGGAAATGCGCTG...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGGTGATGATGGCAGGCTaGTGGGTCAGGAACTGGTTC +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQVMMAG*WVRNWF
Trigger: GAACCAGTTCCTGACCCAGCAGCCTGCCATCATCAC...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTCCTGGGCCACGTCCATaGTCGAGTCACAGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLPGPRP*SSHSSV
Trigger: CACTGAGCTGTGACTCGAGCATGGACGTGGCCCAGG...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTGATATTCCCAAGGTCTaGAATGTAGATGGTGCCATC +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRDIPKV*NVDGAI
Trigger: GATGGCACCATCTACATTGCAGACCTTGGGAATATC...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTCCTCAGCTGGTCTGGTGATGCCGGCCCTTGTGAATGTCTTTGTGTTGCTCACCTGTTCTCCCGGAGATaGAGCCTCATACTGGTTGAA +
Preference number: 4 (lower is better)
Translates to: VLSWSGDAGPCECLCVAHLFSRR*SLILVE
Trigger: TTCAACCAGTATGAGGCTGCATCTCCGGGAGAACAG...GTGAGCAACACAAAGACATTCACAAGGGCCGGCATCACCAGACCAGCTGAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGGGCGGGGCATGCCACTaGTGTCCCGGCGGATCTTTA +
Preference number: 4 (lower is better)
Translates to: ATDTHKLRILNRLHPVTAGGACH*CPGGSL
Trigger: TAAAGATCCGCCGGGACAGCAGTGGCATGCCCCGCC...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGGGCAGAGAGATGTTaGAGCGCCCAATGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLWAERC*SAQWWG
Trigger: CCCCCACCATTGGGCGCTGCAACATCTCTCTGCCCA...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCATCCCTGGCTTTCTGCTaGTCCTTGGCCCAGGCAGTA +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSSLAFC*SLAQAV
Trigger: TACTGCCTGGGCCAAGGAGCAGCAGAAAGCCAGGGA...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCTCCCTGGCTTTCTGCTaGTCCTTGGCCCAGGCAGTA +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCSLAFC*SLAQAV
Trigger: TACTGCCTGGGCCAAGGAGCAGCAGAAAGCCAGGGA...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGTAACCACTTCGGTGTaGGGAGGGCTCGCAGATTCC +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCVTTSV*GGLADS
Trigger: GGAATCTGCGAGCCCTCCCCACACCGAAGTGGTTAC...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAACTGGCTGTGGTGGTTTaGAGGGCCACTGCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQLAVVV*RATAGG
Trigger: GCCTCCAGCAGTGGCCCTCCAAACCACCACAGCCAG...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGTTGACTGGCTGTGGTaGTTTGGAGGGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCVDWLW*FGGPLL
Trigger: CAGCAGTGGCCCTCCAAACCACCACAGCCAGTCAAC...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGGAACAGACTCTGGGGTaGTGGCCAGGTCGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: ATDTHKLRILNRLHPVTAEQTLG*WPGRWA
Trigger: CGCCCAACGACCTGGCCACCACCCCAGAGTCTGTTC...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGGAGAATGTATTCCGTaGCAGCAGGCGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLGECIP*QQAGWW
Trigger: CCACCACCCCGCCTGCTGCCACGGAATACATTCTCC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGAATATGCCAGCAAAATaGCCAAGAGGAGGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQNMPAK*PRGGRR
Trigger: CCGCCGCCCTCCTCTTGGCCATTTTGCTGGCATATT...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCATGCTCCGGCGTTCCCTaGGCGACTCGACCACGCTCC +
Preference number: 4 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPCSGVP*ATRPRS
Trigger: GGAGCGTGGTCGAGTCGCCCAGGGAACGCCGGAGCA...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGCCATGCCCACTACACTaGTCTGGGCACTGGACCCTC +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVPCPLH*SGHWTL
Trigger: GAGGGTCCAGTGCCCAGACCAGTGTAGTGGGCATGG...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGTCAATGCAGCGGGGGTaGCACACGCGCTGGTCACAA +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVSMQRG*HTRWSQ
Trigger: TTGTGACCAGCGCGTGTGCCACCCCCGCTGCATTGA...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCACGCAGGAGGTTTCCATaGCAACGTTGCATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSRRRFP*QRCIQA
Trigger: GGCCTGGATGCAACGTTGCCATGGAAACCTCCTGCG...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCCGAGTCACAGCTCAGTaGTCGGACAGCTGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCRVTAQ*SDSCEV
Trigger: GACCTCACAGCTGTCCGACCACTGAGCTGTGACTCG...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCAGCGATGATGCTGACCTaGTGGTTCTCCGTGATCCGC +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSAMMLT*WFSVIR
Trigger: GCGGATCACGGAGAACCACCAGGTCAGCATCATCGC...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAATCAGGCATGAGCAGGTaGCGGGGCATGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPESGMSR*RGMPLL
Trigger: CAGCAGTGGCATGCCCCGCCACCTGCTCATGCCTGA...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAATTTCCCGGTGCAGACTaGTCACTACGCCCGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPEFPGAD*SLRPWG
Trigger: GCCCCACGGGCGTAGTGACCAGTCTGCACCGGGAAA...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGACGTGGGGCTCACTGTaGAAGCTGACAGCCATGCCG +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVTWGSL*KLTAMP
Trigger: CGGCATGGCTGTCAGCTTCCACAGTGAGCCCCACGT...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGTCAGGCGCCACTCGATaGAGTTCAGGCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQSGATR*SSGHSP
Trigger: TGGAGAATGGCCTGAACTCCATCGAGTGGCGCCTGA...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGAGGAGATTCCTTCCGTaGACCCGAAGCTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQRRFLP*TRSFLP
Trigger: TGGGAGGAAGCTTCGGGTCCACGGAAGGAATCTCCT...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAATTGACGGCCACACTCTaGAGCTGGCCGTCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPELTATL*SWPSPS
Trigger: TGACGGGGACGGCCAGCTCCAGAGTGTGGCCGTCAA...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAATTGACGGCCACACTCTaGAGCTGGCCGTCCCCGTCA +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQLTATL*SWPSPS
Trigger: TGACGGGGACGGCCAGCTCCAGAGTGTGGCCGTCAA...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACTTCTGTCTTAAGAACTaGATGTTGCTGCTACTGTCT +
Preference number: 4 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHFCLKN*MLLLLS
Trigger: AGACAGTAGCAGCAACATCCAGTTCTTAAGACAGAA...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGTGTATAAACGGTCCCTaGGGTCAAAGGGTATCCCGG +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQCINGP*GQRVSR
Trigger: CCGGGATACCCTTTGACCTCAGGGACCGTTTATACA...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCAGGTTGTCTCCAGGAATaGTGTGGGTGCTGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSGCLQE*CGCCPC
Trigger: GCAAGGACAGCACCCACATCATTCCTGGAGACAACC...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGTGCGCTCCTGGCTCATaGAAGGGGCTCGCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVCAPGS*KGLAQS
Trigger: ACTTTGAGCGAGCCCCTTTCATGAGCCAGGAGCGCA...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGTACCTCTGGGGCTCATaGGGGTGGCGTCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRYLWGS*GWRPQP
Trigger: AGGCTGTGGACGCCACCCTCATGAGCCCCAGAGGTA...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCAGCAATGGCGCTGGCTaGTTCCAGCGCAGAATGGAT +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCSNGAG*FQRRMD
Trigger: ATCCATTCTGCGCTGGAATCAGCCAGCGCCATTGCT...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACCCAGCTCCAGGTTCTaGGTGGACACGGCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPEPSSRF*VDTALR
Trigger: CCTCAAAGCCGTGTCCACTCAGAACCTGGAGCTGGG...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTGCCCAATGGTGGGGGTaGTGGTGCCTGCGAGGACGT +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFAQWWG*WCLRGR
Trigger: ACGTCCTCGCAGGCACCATCACCCCCACCATTGGGC...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTATGATGTTGCTGAGCTaGAATCCAAACATCACAAGC +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRMMLLS*NPNITS
Trigger: GCTTGTGATGTTTGGATTTCAGCTCAGCAACATCAT...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCTGTAGCGACACTCTTTaGCACACCGTCCCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCCSDTL*HTVPWS
Trigger: TGACCAGGGGACGGTGTGGCAAAGAGTGTCGCTACA...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTCTGCATCAGACCCAGTaGTCAGGGAGTAGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLLHQTQ*SGSSPG
Trigger: ACCAGGGCTACTCCCTGAGCACTGGGTCTGATGCAG...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGTGGACAAGCCAGAGCTaGGCCTGGATTTTATCCCTC +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQWTSQS*AWILSL
Trigger: GAGGGATAAAATCCAGGCGCAGCTCTGGCTTGTCCA...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGCGCAGTTCCCATCAATaGAGGAGCCATGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: ATDTHKLRILNRLHPVTARSSHQ*RSHGPH
Trigger: GTGGGGGCCATGGCTCCTGCATTGATGGGAACTGCG...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGGGCAGCCATCAATGGTaGAGTGTTCACCATTCCAGC +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQGSHQW*SVHHSS
Trigger: GCTGGAATGGTGAACACTGCACCATTGATGGCTGCC...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAAGCTGGGACAGGAGATaGTTCTGCGGCGACCGTTGC +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPESWDRR*FCGDRC
Trigger: GCAACGGTCGCCGCAGAAGCATCTCCTGTCCCAGCT...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTCCTCAGCTGGTCTGGTGATGCCGGCCCTTGTGAATGTCTTTGTGTTGCTCACGGGCTAACAGTTTGTTaGCTTCAGCAAGGCCATTAC +
Preference number: 4 (lower is better)
Translates to: VLSWSGDAGPCECLCVAHGLTVC*LQQGHY
Trigger: GTAATGGCCTTGCTGAAGGCAACAAACTGTTAGCCC...GTGAGCAACACAAAGACATTCACAAGGGCCGGCATCACCAGACCAGCTGAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACCTGGGCCACGTCCATaGTCGAGTCACAGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPEPGPRP*SSHSSV
Trigger: CACTGAGCTGTGACTCGAGCATGGACGTGGCCCAGG...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTCCGGGAACCTGGCAGTaGATAGGCCGTCCCGCGATG +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFPGTWQ*IGRPAM
Trigger: CATCGCGGGACGGCCTATGCACTGCCAGGTTCCCGG...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGGACGTCCACCGTCCTaGCAGCACGTCATAATCACG +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLGRPPS*QHVIIT
Trigger: CGTGATTATGACGTGCTGGCAGGACGGTGGACGTCC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCAAGCAAACCAGTGGCCTaGTTTCTCTCGGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSSKPVA*FLSDAG
Trigger: GCCAGCATCCGAGAGAAAGCAGGCCACTGGTTTGCT...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGCCCGTGCTCAGGAGTTaGTGCTTCTCGCCCTCCGTC +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRPVLRS*CFSPSV
Trigger: GACGGAGGGCGAGAAGCAGCAACTCCTGAGCACGGG...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCAGTTGCTGCTACTGTCTaGCAGCTCCGGGTACTGTTC +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSVAATV*QLRVLF
Trigger: GAACAGTACCCGGAGCTGGCAGACAGTAGCAGCAAC...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAATGCCACACCGTCCCCTaGTCAAAGAGCGATGTCGCC +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPECHTVP*SKSDVA
Trigger: GGCGACATCGCTCTTTGACCAGGGGACGGTGTGGCA...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGTCTGATGGCATGTTCTaGAGACATCCCTCCCTCGGT +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQSDGMF*RHPSLG
Trigger: ACCGAGGGAGGGATGTCTCCAGAACATGCCATCAGA...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCACCGAGTTCTCGCGGCTaGACAAGCCAGAGCTGCGCC +
Preference number: 4 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPPSSRG*TSQSCA
Trigger: GGCGCAGCTCTGGCTTGTCCAGCCGCGAGAACTCGG...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGAGGCAGCTGAGCAGATaGGAGGAGGCTAGACGAGGA +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVRQLSR*EEARRG
Trigger: TCCTCGTCTAGCCTCCTCCCATCTGCTCAGCTGCCT...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGTTGACTGGCTGTGGTaGTTTGGAGGGCCACTGCTG +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLVDWLW*FGGPLL
Trigger: CAGCAGTGGCCCTCCAAACCACCACAGCCAGTCAAC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGTTGGCCGAGGAGTGGTaGTGGGACAGGGTGTGGTTA +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVLAEEW*WDRVWL
Trigger: TAACCACACCCTGTCCCACCACCACTCCTCGGCCAA...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTCCAAAACACCCCTGGTaGGACTTCCTGTGTCACCCG +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLPKHPW*DFLCHP
Trigger: CGGGTGACACAGGAAGTCCCACCAGGGGTGTTTTGG...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCCCTCCAAAACACCCCTaGTGGGACTTCCTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCPPKHP*WDFLCH
Trigger: GTGACACAGGAAGTCCCACCAGGGGTGTTTTGGAGG...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGTTCTGCACCAGAGTCTaGATGCTCCGGCGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVFCTRV*MLRRSL
Trigger: CAGGGAACGCCGGAGCATCCAGACTCTGGTGCAGAA...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTCAATGCAGGAGCCATaGCCCCCACAGGAAGGATCG +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLSMQEP*PPQEGS
Trigger: CGATCCTTCCTGTGGGGGCCATGGCTCCTGCATTGA...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAACCATGCCCACTACACTaGTCTGGGCACTGGACCCTC +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQPCPLH*SGHWTL
Trigger: GAGGGTCCAGTGCCCAGACCAGTGTAGTGGGCATGG...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGGGTCACAGCTGGGGATaGAGTTTTCCTCGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQGHSWG*SFPRSS
Trigger: TGAAGACCGAGGAAAACTCCATCCCCAGCTGTGACC...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAGGGTCTCAGGCACAATaGGGTTCGAGGCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPEGSQAQ*GSRQGK
Trigger: CTTCCCCTGCCTCGAACCCCATTGTGCCTGAGACCC...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCACCAGCCTCCAAGGTTaGAAGGGTCCAGCTCGAATC +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCTSLQG*KGPARI
Trigger: GATTCGAGCTGGACCCTTCCAACCTTGGAGGCTGGT...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGCAAGGCCATTACAGCTaGGACAGGAGATGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQQGHYS*DRRCFC
Trigger: GCAGAAGCATCTCCTGTCCCAGCTGTAATGGCCTTG...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGCGATGATGCTGACCTaGTGGTTCTCCGTGATCCGC +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLAMMLT*WFSVIR
Trigger: GCGGATCACGGAGAACCACCAGGTCAGCATCATCGC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGGTCTGCAATGTAGATaGTGCCATCTGGAGCCACGG +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCGLQCR*CHLEPR
Trigger: CCGTGGCTCCAGATGGCACCATCTACATTGCAGACC...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAACAGGTTGAAGGGGGCTaGCTCCTTGCCCACGTTCCT +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQQVEGG*LLAHVP
Trigger: AGGAACGTGGGCAAGGAGCCAGCCCCCTTCAACCTG...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTCCTCAGCTGGTCTGGTGATGCCGGCCCTTGTGAATGTCTTTGTGTTGCTCACCTCTCAGTTGTCTGCTaGACACCTGTAATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: VLSWSGDAGPCECLCVAHLSVVC*TPVMSC
Trigger: ACAGCTCATTACAGGTGTCCAGCAGACAACTGAGAG...GTGAGCAACACAAAGACATTCACAAGGGCCGGCATCACCAGACCAGCTGAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGCTCTCTGTCTCGCTTaGTCCAGGACGCGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQALCLA*SRTRAF
Trigger: AAAGGCCCGCGTCCTGGACCAAGCGAGACAGAGAGC...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGCTCGTCCCCACAGTCTaGTGGCATGTTCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVLVPTV*WHVLET
Trigger: TGTCTCCAGAACATGCCATCAGACTGTGGGGACGAG...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTCCTCAGCTGGTCTGGTGATGCCGGCCCTTGTGAATGTCTTTGTGTTGCTCACTGCCCAGGGAGATGTTaGACTTTAAGAATTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VLSWSGDAGPCECLCVAHCPGRC*TLRIEA
Trigger: AGCCTCAATTCTTAAAGTTCAACATCTCCCTGGGCA...GTGAGCAACACAAAGACATTCACAAGGGCCGGCATCACCAGACCAGCTGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCACATCCAGGCGTTCCATaGAGTCATACTGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSHPGVP*SHTGHE
Trigger: CTCATGCCCAGTATGACTTCATGGAACGCCTGGATG...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGCCGATGCAGACGCCGTaGGTGCCACAGTCTACTGAG +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRPMQTP*VPQSTE
Trigger: CTCAGTAGACTGTGGCACTCACGGCGTCTGCATCGG...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGGGGCTCGCTCAAAGTaGAGAGTCAAGGCAGAACCC +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQGARSK*RVKAEP
Trigger: GGGTTCTGCCTTGACTCTTCACTTTGAGCGAGCCCC...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGTCCAGCTCGAATCCCTaGAGCAGGGCTGTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVSSSNP*SRAVLF
Trigger: GAAAAGGACAGCCCTGCTTCAGGGATTCGAGCTGGA...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTCCAGCAGGGTGGAGATaGTTCCGTTTTGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLPAGWR*FRFGPP
Trigger: AGGTGGACCAAAACGGAATCATCTCCACCCTGCTGG...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGCCAGCAGGGTGGAGATaGTTCCGTTTTGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVPAGWR*FRFGPP
Trigger: AGGTGGACCAAAACGGAATCATCTCCACCCTGCTGG...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAATCTGATTATCAGGCATaGGCAGGTGGCGGGGCATGC +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQSDYQA*AGGGAC
Trigger: GCATGCCCCGCCACCTGCTCATGCCTGATAATCAGA...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGCCCAGCTCCAGGTTCTaGGTGGACACGGCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRPSSRF*VDTALR
Trigger: CCTCAAAGCCGTGTCCACTCAGAACCTGGAGCTGGG...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGTAGCGACACTCTTTaGCACACCGTCCCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLCSDTL*HTVPWS
Trigger: TGACCAGGGGACGGTGTGGCAAAGAGTGTCGCTACA...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTCTGCCGGCTGGAGTTaGCAATTGAGTCCGAGCAGA +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLSAGWS*QLSPSR
Trigger: TCTGCTCGGACTCAATTGGCAACTCCAGCCGGCAGA...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGAAAGGTGTGTCCATCTaGCGGCTGGAGTTGCCAATT +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQKGVSI*RLELPI
Trigger: AATTGGCAACTCCAGCCGGCAGATGGACACACCTTT...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCAGTCAGGGAGGTAAGTaGCATGCCCACTACACTGGT +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCSQGGK*HAHYTG
Trigger: ACCAGTGTAGTGGGCATGGCACTTACCTCCCTGACT...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGATCTCCCGTTACCGTTaGACAAATCAGGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQISRYR*TNQGSH
Trigger: ATGGCTGCCCTGATTTGTGCAACGGTAACGGGAGAT...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCATGTTCTGACCCAGTGTaGATCTCCCGTTACCGTTGC +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSCSDPV*ISRYRC
Trigger: GCAACGGTAACGGGAGATGCACACTGGGTCAGAACA...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTTTCCATGGCAACGTTaGATCCAGGCCCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLFPWQR*IQALSS
Trigger: GCTGGAGAGGGCCTGGATGCAACGTTGCCATGGAAA...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGTGATGATGGCAGGCTaGTGGGTCAGGAACTGGTTC +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLVMMAG*WVRNWF
Trigger: GAACCAGTTCCTGACCCAGCAGCCTGCCATCATCAC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGTGGGCAGAGAGATGTTaGAGCGCCCAATGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRWAERC*SAQWWG
Trigger: CCCCCACCATTGGGCGCTGCAACATCTCTCTGCCCA...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATCGGCTGCCAGCCCACTaGTCGGGAGCCACAGGAAGG +
Preference number: 4 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANRLPAH*SGATGR
Trigger: CCTTCCTGTGGCTCCCGAGCAGTGGGCTGGCAGCCG...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGAGCAAACCAGTGGCCTaGTTTCTCTCGGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVSKPVA*FLSDAG
Trigger: GCCAGCATCCGAGAGAAAGCAGGCCACTGGTTTGCT...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCTCTGATGGCATGTTCTaGAGACATCCCTCCCTCGGT +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCSDGMF*RHPSLG
Trigger: ACCGAGGGAGGGATGTCTCCAGAACATGCCATCAGA...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAAGCCAGAGCTGCGCCTaGATTTTATCCCTCGTCCCC +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPESQSCA*ILSLVP
Trigger: GGGGACGAGGGATAAAATCCAGGCGCAGCTCTGGCT...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGTGGTTATGAGGGGGTaGCAGAGGGGGCCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRVVMRG*QRGPQC
Trigger: ACACTGAGGCCCCCTCTGCCACCCCCTCATAACCAC...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAATTGGCCGAGGAGTGGTaGTGGGACAGGGTGTGGTTA +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQLAEEW*WDRVWL
Trigger: TAACCACACCCTGTCCCACCACCACTCCTCGGCCAA...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATTGGTGGCCAGGTCGTTaGGCGCAGGAGCTGGGGCGT +
Preference number: 4 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANWWPGR*AQELGR
Trigger: ACGCCCCAGCTCCTGCGCCCAACGACCTGGCCACCA...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGTTCTGCACCAGAGTCTaGATGCTCCGGCGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: ATDTHKLRILNRLHPVTAFCTRV*MLRRSL
Trigger: CAGGGAACGCCGGAGCATCCAGACTCTGGTGCAGAA...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCATAGAAGCTGTTCCATaGCAGCCACACTGTGCGCTC +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCIEAVP*QPHCAL
Trigger: GAGCGCACAGTGTGGCTGCCATGGAACAGCTTCTAT...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCTGGGTCAGGAACTaGTTCTCCCCTGTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLCWVRN*FSPVPL
Trigger: CAAAGGGACAGGGGAGAACCAGTTCCTGACCCAGCA...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGATGATGCTGACCTGGTaGTTCTCCGTGATCCGCAGG +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVMMLTW*FSVIRR
Trigger: CCTGCGGATCACGGAGAACCACCAGGTCAGCATCAT...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATCTGTCCTCTCGCTCATaGCCCCTCGCTGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANLSSRS*PLAGGR
Trigger: CCGGCCTCCAGCGAGGGGCCATGAGCGAGAGGACAG...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTGGTGGTGGCCCAGGTTaGTCTTGTAGGAAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFGGGPG*SCRKPG
Trigger: GCCGGGCTTCCTACAAGACCAACCTGGGCCACCACC...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGCAGGTTGAAGGGGGCTaGCTCCTTGCCCACGTTCCT +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRQVEGG*LLAHVP
Trigger: AGGAACGTGGGCAAGGAGCCAGCCCCCTTCAACCTG...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACATTCACCAGCAGCGTaGGCTGTGACACCGTCACGT +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPEHSPAA*AVTPSR
Trigger: ACGTGACGGTGTCACAGCCCACGCTGCTGGTGAATG...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGGTGCACCAGGTCTGTaGCTCGGTTTCCATAGTGCA +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQGAPGL*LGFHSA
Trigger: TGCACTATGGAAACCGAGTCACAGACCTGGTGCACC...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTAGGGGGCCTCAGTGTTaGCTGGCTGTGGTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFRGPQC*LAVVVW
Trigger: CCAAACCACCACAGCCAGTCAACACTGAGGCCCCCT...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAATCAGTGAGTTCCTGTTaGGGGAGTTGGCCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPESVSSC*GSWPRS
Trigger: ACTCCTCGGCCAACTCCCTCAACAGGAACTCACTGA...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGCAGCTATCCTGGAGCTaGACAGACTCTGGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRQLSWS*TDSGVV
Trigger: CACCACCCCAGAGTCTGTTCAGCTCCAGGATAGCTG...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGGTTGTCTCCAGGAATaGTGTGGGTGCTGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQGCLQE*CGCCPC
Trigger: GCAAGGACAGCACCCACATCATTCCTGGAGACAACC...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTTTTCTCCCACAGGATaGGACTGGGGCAGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLFSPTG*DWGRSH
Trigger: ATGAGACCTGCCCCAGTCTCATCCTGTGGGAGAAAA...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAATCCAGCTCGAATCCCTaGAGCAGGGCTGTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQSSSNP*SRAVLF
Trigger: GAAAAGGACAGCCCTGCTTCAGGGATTCGAGCTGGA...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCATGCGCCGGATATAGTTaGAGTCACCAACAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSCAGYS*SHQQRG
Trigger: GCCTCTTTGTTGGTGACTTCAACTATATCCGGCGCA...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATGCCCAATGGTGGGGGTaGTGGTGCCTGCGAGGACGT +
Preference number: 4 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANAQWWG*WCLRGR
Trigger: ACGTCCTCGCAGGCACCATCACCCCCACCATTGGGC...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACCCCACTTTGGAGATTaGCCATCTTCAGGACACCGG +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPEPHFGD*PSSGHR
Trigger: CCGGTGTCCTGAAGATGGTCAATCTCCAAAGTGGGG...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTCTCCGTGGAAGCCAATaGCCATCTGGAAGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLLRGSQ*PSGSLD
Trigger: ATCCAGACTTCCAGATGGTCATTGGCTTCCACGGAG...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTGGCCGTAGCGGATACTaGGCAGCAGCGTGGAGTACT +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFGRSGY*AAAWST
Trigger: AGTACTCCACGCTGCTGCTCAGTATCCGCTACGGCC...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTTCATCCGACTCCCGGTaGACCAGGTCTGTGACTCGG +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFSSDSR*TRSVTR
Trigger: CCGAGTCACAGACCTGGTGCACCGGGAGTCGGATGA...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGTCTTGAAAAGGAAGTaGCGAGTCTCCAGTGGGACG +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVVLKRK*RVSSGT
Trigger: CGTCCCACTGGAGACTCGGCACTTCCTTTTCAAGAC...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAAGATTAGCACCAGAGTCTGGATaGTCCGGCGTTCCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: PCNCVLLSTMESPKTKRLAPESG*SGVPWA
Trigger: CGCCCAGGGAACGCCGGAGCATCCAGACTCTGGTGC...TAATCTTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCCCCACATCCAAGTACTaGACAAACACAGCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCPTSKY*TNTASF
Trigger: GAACGAGGCTGTGTTTGTGCAGTACTTGGATGTGGG...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCACCCACATCCAAGTACTaGACAAACACAGCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSPTSKY*TNTASF
Trigger: GAACGAGGCTGTGTTTGTGCAGTACTTGGATGTGGG...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCCCATCTCCTTGTCCTTaGCGTCATTGTAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCPSPCP*RHCRRP
Trigger: TGGCCTTCTACAATGACGGCAAGGACAAGGAGATGG...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCAATAGAAGGACTTCACTaGAGGCCAGTCTGTCTGACC +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSIEGLH*RPVCLT
Trigger: GGTCAGACAGACTGGCCTGCAGTGAAGTCCTTCTAT...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCAGACTTCTGGAAGAGATaGCCCTCTACAGCAACCATC +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSDFWKR*PSTATI
Trigger: GATGGTTGCTGTAGAGGGGCATCTCTTCCAGAAGTC...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGACACGATCCGGCCTTaGTTGTCAATGTCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLDTIRP*LSMSVL
Trigger: GAGGACAGACATTGACAAGCAAGGCCGGATCGTGTC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCATGCGTGGACATGCTGTaGCGGGCGACACTGGGCATA +
Preference number: 4 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPCVDML*RATLGI
Trigger: TATGCCCAGTGTCGCCCGGCACAGCATGTCCACGCA...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCACACCTGGCGCCCAGTaGCCAAGAAAGATGTCTTTA +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCTPGAQ*PRKMSL
Trigger: TAAAGACATCTTTCTTGGGCACTGGGCGCCAGGTGT...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCACCATGGGTGTCAAAGTaGTTGCTAAGCGTCATGACG +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSPWVSK*LLSVMT
Trigger: CGTCATGACGCTTAGCAAGCACTTTGACACCCATGG...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCCCTGGGTTTAGAAGGTaGAGGTTCCCATTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCPGFRR*RFPLRS
Trigger: TGACCTCAATGGGAACCTGCACCTTCTAAACCCAGG...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCAGCTGGCCTTGTTGTATaGTCTTGTCAGAAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSAGLVV*SCQKAL
Trigger: AAGGGCCTTCTGACAAGAGCATACAACAAGGCCAGC...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGGACGTCCACCGTCCTaGCAGCACGTCATAATCACG +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRGRPPS*QHVIIT
Trigger: CGTGATTATGACGTGCTGGCAGGACGGTGGACGTCC...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCATGCCTCTCAGTTGTCTaGTGGACACCTGTAATGAGC +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSCLSVV*WTPVMS
Trigger: GCTCATTACAGGTGTCCAGCAGACAACTGAGAGGCA...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGTGTCCAGAGAGGAGCTaGTGTAGCGACACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVCPERS*CSDTLC
Trigger: GCAAAGAGTGTCGCTACACCAGCTCCTCTCTGGACA...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGTAACCACTTCGGTGTaGGGAGGGCTCGCAGATTCC +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRVTTSV*GGLADS
Trigger: GGAATCTGCGAGCCCTCCCCACACCGAAGTGGTTAC...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCACATCTGGCAGCTAACTaGTGGAGGATTATGGGAGCT +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSHLAAN*WRIMGA
Trigger: AGCTCCCATAATCCTCCACCAGTTAGCTGCCAGATG...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGGCCTCAGTGTTGACTaGCTGTGGTGGTTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRGLSVD*LWWFGG
Trigger: CCCTCCAAACCACCACAGCCAGTCAACACTGAGGCC...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAGTGGTTATGAGGGGGTaGCAGAGGGGGCCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPVVMRG*QRGPQC
Trigger: ACACTGAGGCCCCCTCTGCCACCCCCTCATAACCAC...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTGGAGAATGTATTCCGTaGCAGCAGGCGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFGECIP*QQAGWW
Trigger: CCACCACCCCGCCTGCTGCCACGGAATACATTCTCC...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGCCTCCAAAACACCCCTaGTGGGACTTCCTGTGTCAC +
Preference number: 4 (lower is better)
Translates to: ATDTHKLRILNRLHPVTAPPKHP*WDFLCH
Trigger: GTGACACAGGAAGTCCCACCAGGGGTGTTTTGGAGG...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp CCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAAGATTAGGGTGGCACACGCGCTaGTCACAAGCTGCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PCNCVLLSTMESPKTKRLGWHTR*SQAAPV
Trigger: GACAGGCGCAGCTTGTGACCAGCGCGTGTGCCACCC...TAATCTTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTTCAATGCAGCGGGGGTaGCACACGCGCTGGTCACAA +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFSMQRG*HTRWSQ
Trigger: TTGTGACCAGCGCGTGTGCCACCCCCGCTGCATTGA...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTCAGGGCAGCCATCAATaGTGCAGTGTTCACCATTCC +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLQGSHQ*CSVHHS
Trigger: GGAATGGTGAACACTGCACCATTGATGGCTGCCCTG...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAATGCTGGGTCAGGAACTaGTTCTCCCCTGTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQCWVRN*FSPVPL
Trigger: CAAAGGGACAGGGGAGAACCAGTTCCTGACCCAGCA...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAATCAGGCGCCACTCGATaGAGTTCAGGCCATTCTCCA +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPESGATR*SSGHSP
Trigger: TGGAGAATGGCCTGAACTCCATCGAGTGGCGCCTGA...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTCCTCAGCTGGTCTGGTGATGCCGGCCCTTGTGAATGTCTTTGTGTTGCTCACTTCGGTCATAATCAATaGACAGGAGATTCCTTCCGT +
Preference number: 4 (lower is better)
Translates to: VLSWSGDAGPCECLCVAHFGHNQ*TGDSFR
Trigger: ACGGAAGGAATCTCCTGTCCATTGATTATGACCGAA...GTGAGCAACACAAAGACATTCACAAGGGCCGGCATCACCAGACCAGCTGAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGGTGCACCAGGTCTGTaGCTCGGTTTCCATAGTGCA +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRGAPGL*LGFHSA
Trigger: TGCACTATGGAAACCGAGTCACAGACCTGGTGCACC...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGCTGGAGTTGCCAATTaGGTCCGAGCAGATGCATTG +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQAGVAN*VRADAL
Trigger: CAATGCATCTGCTCGGACTCAATTGGCAACTCCAGC...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGCTGCTGTTTTTCAATaGCCAGGGCACTTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQAAVFQ*PGHFAS
Trigger: GGAGGCAAAGTGCCCTGGTCATTGAAAAACAGCAGC...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAACATCCAGGCGTTCCATaGAGTCATACTGGGCATGAG +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQHPGVP*SHTGHE
Trigger: CTCATGCCCAGTATGACTTCATGGAACGCCTGGATG...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTAATCCTGGGAAACAGTaGCACAGTCCAGACACGCAT +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLNPGKQ*HSPDTH
Trigger: ATGCGTGTCTGGACTGTGTCACTGTTTCCCAGGATT...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCACAGAGCAGGCTGTTCTaGCAGGCTGACTGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPQSRLF*QADCRQ
Trigger: CTGCCTACAGTCAGCCTGTCAGAACAGCCTGCTCTG...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTCAGAGCAGGCTGTTCTaGCAGGCTGACTGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFQSRLF*QADCRQ
Trigger: CTGCCTACAGTCAGCCTGTCAGAACAGCCTGCTCTG...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCAAGCTCAATTTCTTCATaGAGAACCTGGGTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSSSISS*RTWVSG
Trigger: GCCTGAGACCCAGGTTCTTCATGAAGAAATTGAGCT...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCACTCCGCTCAGAGACTTaGCTCGGTAGATTCGGCGAC +
Preference number: 4 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPLRSET*LGRFGD
Trigger: GTCGCCGAATCTACCGAGTCAAGTCTCTGAGCGGAG...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp CCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAAGATTAAGTTGTCCATGGGGTTaGCGGCGAGGTCTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: PCNCVLLSTMESPKTKRLSCPWG*RRGLSA
Trigger: GGCCGACAGACCTCGCCGTCAACCCCATGGACAACT...TAATCTTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAACAACCTTTCGGTACCTaGTGGTACAGGAGAAACCCC +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQQPFGT*WYRRNP
Trigger: GGGGTTTCTCCTGTACCATCAGGTACCGAAAGGTTG...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTCATATTGCACTTCCTTaGTGCGCCCATGGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLHIALP*CAHGCQ
Trigger: TTGACACCCATGGGCGCATCAAGGAAGTGCAATATG...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAAGTGCCACAGTCTACTaGGCACACAACAGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPESATVY*AHNRAV
Trigger: GACTGCTCTGTTGTGTGCTCAGTAGACTGTGGCACT...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATCCACTGCTGGAGGCTTaGTGGGGCCCTGAGCATGCT +
Preference number: 4 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANPLLEA*WGPEHA
Trigger: AGCATGCTCAGGGCCCCAGCAAGCCTCCAGCAGTGG...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAGTCTTGAAAAGGAAGTaGCGAGTCTCCAGTGGGACG +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPEVLKRK*RVSSGT
Trigger: CGTCCCACTGGAGACTCGGCACTTCCTTTTCAAGAC...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAAACACAGCCTCGTTCTaGACCAGAGTCTGGATGCTC +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPENTASF*TRVWML
Trigger: GAGCATCCAGACTCTGGTGCAGAACGAGGCTGTGTT...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGTTTCCATGGCAACGTTaGATCCAGGCCCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRFPWQR*IQALSS
Trigger: GCTGGAGAGGGCCTGGATGCAACGTTGCCATGGAAA...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCACAGCGACTTGTACCCTaGAGTTCTAGAGCTGAGATA +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSQRLVP*SSRAEI
Trigger: TATCTCAGCTCTAGAACTGCAGGGTACAAGTCGCTG...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGGACACGATCCGGCCTTaGTTGTCAATGTCTGTCCTC +
Preference number: 4 (lower is better)
Translates to: ATDTHKLRILNRLHPVTADTIRP*LSMSVL
Trigger: GAGGACAGACATTGACAAGCAAGGCCGGATCGTGTC...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGAGTAGTGTGTGTCCTTaGCCTCGATGCTGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVSSVCP*PRCCSA
Trigger: TGCACTACAGCATCGAGGGCAAGGACACACACTACT...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTAGACGAGGATGTAGGTaGAATGGGACGACCATTGTC +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLRRGCR*NGTTIV
Trigger: GACAATGGTCGTCCCATTCCACCTACATCCTCGTCT...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTAGGCAGCTGAGCAGATaGGAGGAGGCTAGACGAGGA +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFRQLSR*EEARRG
Trigger: TCCTCGTCTAGCCTCCTCCCATCTGCTCAGCTGCCT...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACTGGCAGCTAACTGGTaGAGGATTATGGGAGCTAGG +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPELAANW*RIMGAR
Trigger: CCTAGCTCCCATAATCCTCCACCAGTTAGCTGCCAG...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGAATATGCCAGCAAAATaGCCAAGAGGAGGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRNMPAK*PRGGRR
Trigger: CCGCCGCCCTCCTCTTGGCCATTTTGCTGGCATATT...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATCACTGGTCTGGGCACTaGACCCTCGCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANHWSGH*TLASSQ
Trigger: CTGTGAGCTGGCGAGGGTCCAGTGCCCAGACCAGTG...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGCAGGGCAGCCATCAATaGTGCAGTGTTCACCATTCC +
Preference number: 4 (lower is better)
Translates to: ATDTHKLRILNRLHPVTAQGSHQ*CSVHHS
Trigger: GGAATGGTGAACACTGCACCATTGATGGCTGCCCTG...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTAGGCAGAACCCCCATTaGCAATCAGATCAAACGTGC +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLRQNPH*QSDQTC
Trigger: GCACGTTTGATCTGATTGCCAATGGGGGTTCTGCCT...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCTTACCAGGGTGTCCATaGCATAGAAGCTGTTCCATG +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCLPGCP*HRSCSM
Trigger: CATGGAACAGCTTCTATGCCATGGACACCCTGGTAA...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGGTCACAGCTGGGGATaGAGTTTTCCTCGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQGHSWG*SFPRSS
Trigger: TGAAGACCGAGGAAAACTCCATCCCCAGCTGTGACC...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGATGATGATTGGATCTaGCCGGACAAAGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVDDDWI*PDKATE
Trigger: CTCAGTGGCTTTGTCCGGCCAGATCCAATCATCATC...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAACAAGGCCATTACAGCTaGGACAGGAGATGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQQGHYS*DRRCFC
Trigger: GCAGAAGCATCTCCTGTCCCAGCTGTAATGGCCTTG...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAATCAGGCCATTCTCCATaGGCAGAGAGATGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPESGHSP*AERCCS
Trigger: GCTGCAACATCTCTCTGCCCATGGAGAATGGCCTGA...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTATCTCTGATAACTTaGAGAGTTTTCCATACTTGT +
Preference number: 4 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRLSLIT*RVFHTC
Trigger: ACAAGTATGGAAAACTCTCCAAGTTATCAGAGATAG...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAATCTTCAGGACACCGGTaGTCTCGTCATACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPESSGHR*SRHTQR
Trigger: CCTTTGGGTATGACGAGACCACCGGTGTCCTGAAGA...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCAGAGAAACCCCCACTTTaGAGATTGACCATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSEKPPL*RLTIFR
Trigger: CCTGAAGATGGTCAATCTCCAAAGTGGGGGTTTCTC...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCCATAGGTGTACTTTGTaGTGTTGGCATAGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCHRCTL*CWHRAL
Trigger: TAGGGCCCTATGCCAACACCACAAAGTACACCTATG...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGCACTACTGCTCTCCATaGCAAATAGGTGGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: ATDTHKLRILNRLHPVTAHYCSP*QIGGPG
Trigger: TCCAGGGCCACCTATTTGCCATGGAGAGCAGTAGTG...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGAAGCCAATGACCATCTaGAAGTCTGGATTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQKPMTI*KSGLES
Trigger: TGACTCCAATCCAGACTTCCAGATGGTCATTGGCTT...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCAGCAGCGTGGAGTACTaGAACTCAATGTTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCSSVEY*NSMLVN
Trigger: GTTCACCAACATTGAGTTCCAGTACTCCACGCTGCT...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTCTCGTCCCCACAGTCTaGTGGCATGTTCTGGAGACA +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFLVPTV*WHVLET
Trigger: TGTCTCCAGAACATGCCATCAGACTGTGGGGACGAG...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAATGCTCTGAGCAGGTATaGATTGGGGGAGAATTCCTC +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPECSEQV*IGGEFL
Trigger: GAGGAATTCTCCCCCAATTCATACCTGCTCAGAGCA...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCACCGCCGATTGGTCAGTaGGTTCCTGTTGAGGGAGTT +
Preference number: 4 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPPPIGQ*VPVEGV
Trigger: AACTCCCTCAACAGGAACTCACTGACCAATCGGCGG...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp CCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAAGATTAGCTGGGGCGTGGATTTaGCTCCGCCGATTGGTCAGT +
Preference number: 4 (lower is better)
Translates to: PCNCVLLSTMESPKTKRLAGAWI*LRRLVS
Trigger: ACTGACCAATCGGCGGAGTCAAATCCACGCCCCAGC...TAATCTTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGTGTATAAACGGTCCCTaGGGTCAAAGGGTATCCCGG +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRCINGP*GQRVSR
Trigger: CCGGGATACCCTTTGACCTCAGGGACCGTTTATACA...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGCTGGAGTTGCCAATTaGGTCCGAGCAGATGCATTG +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRAGVAN*VRADAL
Trigger: CAATGCATCTGCTCGGACTCAATTGGCAACTCCAGC...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGCTGCTGTTTTTCAATaGCCAGGGCACTTTGCCTCC +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRAAVFQ*PGHFAS
Trigger: GGAGGCAAAGTGCCCTGGTCATTGAAAAACAGCAGC...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAAATCCTGGGAAACAGTaGCACAGTCCAGACACGCAT +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQNPGKQ*HSPDTH
Trigger: ATGCGTGTCTGGACTGTGTCACTGTTTCCCAGGATT...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATCCGATGCAGACGCCGTaGGTGCCACAGTCTACTGAG +
Preference number: 4 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANPMQTP*VPQSTE
Trigger: CTCAGTAGACTGTGGCACTCACGGCGTCTGCATCGG...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAACTGTCTTGTCCCAGATaGATGTGTAGGCTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQLSCPR*MCRLGW
Trigger: CCAACCTAGCCTACACATTCATCTGGGACAAGACAG...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGTCCCATCATAAGTCATaGGGCCCAGCTCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRSHHKS*GPAPGS
Trigger: AGAACCTGGAGCTGGGCCTCATGACTTATGATGGGA...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGTAGTCAAAGATGACTaGTGCATTGCTTTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLVVKDD*CIAFGW
Trigger: CCACCCGAAAGCAATGCATCAGTCATCTTTGACTAC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTGGTGCAGGTTCCCATTaGGGTCATAGCTATAGCGCC +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFGAGSH*GHSYSA
Trigger: GGCGCTATAGCTATGACCTCAATGGGAACCTGCACC...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAATCCAGATGGCACTGTTaGCACATCATCGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPESRWHC*HIIVSW
Trigger: CCAGGAAACGATGATGTGGCAACAGTGCCATCTGGA...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTCCGCCGACCAACTTCTaGTTCGCCACTGTCTATGCT +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFPPTNF*FATVYA
Trigger: AGCATAGACAGTGGCGAAGCAGAAGTTGGTCGGCGG...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGAACACAGCCTCGTTCTaGACCAGAGTCTGGATGCTC +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRNTASF*TRVWML
Trigger: GAGCATCCAGACTCTGGTGCAGAACGAGGCTGTGTT...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCTTCCGTGGACAGTCCTaGACTGAATCTAAGACAACA +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCFRGQS*TESKTT
Trigger: TGTTGTCTTAGATTCAGTGCAGGACTGTCCACGGAA...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTTGCAGACGCCGTGAGTaGCACAGTCTACTGAGCACA +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFCRRRE*HSLLST
Trigger: TGTGCTCAGTAGACTGTGGCACTCACGGCGTCTGCA...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGGCAGCCATCAATGGTaGAGTGTTCACCATTCCAGC +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRGSHQW*SVHHSS
Trigger: GCTGGAATGGTGAACACTGCACCATTGATGGCTGCC...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAATCTCCCGTTACCGTTaGACAAATCAGGGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQISRYR*TNQGSH
Trigger: ATGGCTGCCCTGATTTGTGCAACGGTAACGGGAGAT...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGCAGCGACTTGTACCCTaGAGTTCTAGAGCTGAGATA +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVQRLVP*SSRAEI
Trigger: TATCTCAGCTCTAGAACTGCAGGGTACAAGTCGCTG...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGGGCTAACAGTTTGTTaGCTTCAGCAAGGCCATTAC +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLGLTVC*LQQGHY
Trigger: GTAATGGCCTTGCTGAAGGCAACAAACTGTTAGCCC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAATTGTTCGCCAGTCCCTaGCACAACTTCCGAATTTCC +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPELFASP*HNFRIS
Trigger: GGAAATTCGGAAGTTGTGGCAGGGACTGGCGAACAA...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGCCCATTCTTGTCTACTaGAATACCTCTGGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVPILVY*NTSGAH
Trigger: ATGAGCCCCAGAGGTATTGCAGTAGACAAGAATGGG...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACTGTTCTCCCGGAGATaGAGCCTCATACTGGTTGAA +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPELFSRR*SLILVE
Trigger: TTCAACCAGTATGAGGCTGCATCTCCGGGAGAACAG...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTTTCTCCATTTCCCGGTaGAGACTGGTCACTACGCCC +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFFSISR*RLVTTP
Trigger: GGGCGTAGTGACCAGTCTGCACCGGGAAATGGAGAA...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGCAGGGTTCCATTATTaGAGAGCTGGTAGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLAGFHY*RAGSCF
Trigger: GAAACAGCTACCAGCTCTGCAATAATGGAACCCTGC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGACACCTGGCGCCCAGTaGCCAAGAAAGATGTCTTTA +
Preference number: 4 (lower is better)
Translates to: ATDTHKLRILNRLHPVTATPGAQ*PRKMSL
Trigger: TAAAGACATCTTTCTTGGGCACTGGGCGCCAGGTGT...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGCGAAGTGTTCCACCTTaGCGGAAATCTCATCATAGC +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVRSVPP*RKSHHS
Trigger: GCTATGATGAGATTTCCGGCAAGGTGGAACACTTCG...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTCGGAACATCTCATATTaGACTTCCTTGATGCGCCCA +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLRNISY*TSLMRP
Trigger: TGGGCGCATCAAGGAAGTGCAATATGAGATGTTCCG...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGCGGAACATCTCATATTaGACTTCCTTGATGCGCCCA +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVRNISY*TSLMRP
Trigger: TGGGCGCATCAAGGAAGTGCAATATGAGATGTTCCG...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACCTGGGTTTAGAAGGTaGAGGTTCCCATTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPEPGFRR*RFPLRS
Trigger: TGACCTCAATGGGAACCTGCACCTTCTAAACCCAGG...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAAGTAGTGTGTGTCCTTaGCCTCGATGCTGTAGTGCA +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPESSVCP*PRCCSA
Trigger: TGCACTACAGCATCGAGGGCAAGGACACACACTACT...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCATTAAGAACTGGATGTTaGTGCTACTGTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSLRTGC*CYCLPA
Trigger: AGCTGGCAGACAGTAGCAGCAACATCCAGTTCTTAA...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCTTAAGAACTGGATGTTaGTGCTACTGTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCLRTGC*CYCLPA
Trigger: AGCTGGCAGACAGTAGCAGCAACATCCAGTTCTTAA...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGCATCTGGCAGCTAACTaGTGGAGGATTATGGGAGCT +
Preference number: 4 (lower is better)
Translates to: ATDTHKLRILNRLHPVTAHLAAN*WRIMGA
Trigger: AGCTCCCATAATCCTCCACCAGTTAGCTGCCAGATG...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTTGTCCATCTGCCGGCTaGAGTTGCCAATTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFCPSAG*SCQLSP
Trigger: CGGACTCAATTGGCAACTCCAGCCGGCAGATGGACA...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGGCCTGGAATGACTTCTaGAAGAGATGCCCCTCTACA +
Preference number: 4 (lower is better)
Translates to: ATDTHKLRILNRLHPVTAAWNDF*KRCPST
Trigger: TGTAGAGGGGCATCTCTTCCAGAAGTCATTCCAGGC...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGATGTGTAGGCTAGGTTaGGAGAAGCCTGGAATGACT +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVMCRLG*EKPGMT
Trigger: AGTCATTCCAGGCTTCTCCCAACCTAGCCTACACAT...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGCCACCTTCCGGATCATaGTGGCATCAACAAAGTACA +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVPPSGS*WHQQST
Trigger: TGTACTTTGTTGATGCCACCATGATCCGGAAGGTGG...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGATTCCAGCGCAGAATaGATGGCGAGTTTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRDSSAE*MASLLS
Trigger: GCTCAGCAAACTCGCCATCCATTCTGCGCTGGAATC...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCAGATGCAGCCTCATACTaGTTGAATGCGTTAAGAACG +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSDAASY*LNALRT
Trigger: CGTTCTTAACGCATTCAACCAGTATGAGGCTGCATC...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGTGCATTGCTTTCGGGTaGGTTGTAAATGTTTCGGAT +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQCIAFG*VVNVSD
Trigger: ATCCGAAACATTTACAACCCACCCGAAAGCAATGCA...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCATGTACTTTGTGGTGTTaGCATAGGGCCCTAGTTTCA +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSCTLWC*HRALVS
Trigger: TGAAACTAGGGCCCTATGCCAACACCACAAAGTACA...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGCATAGGTGTACTTTGTaGTGTTGGCATAGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVHRCTL*CWHRAL
Trigger: TAGGGCCCTATGCCAACACCACAAAGTACACCTATG...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTAGCAGCGTGGAGTACTaGAACTCAATGTTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLSSVEY*NSMLVN
Trigger: GTTCACCAACATTGAGTTCCAGTACTCCACGCTGCT...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATGCCCTGAGCATGCTCTaGGCAGGTATGAATTGGGGG +
Preference number: 4 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANALSML*AGMNWG
Trigger: CCCCCAATTCATACCTGCTCAGAGCATGCTCAGGGC...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTTGCCTGCCAAGAGCTTaGTGCGGTCATAGAAGGACT +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFCLPRA*CGHRRT
Trigger: AGTCCTTCTATGACCGCATCAAGCTCTTGGCAGGCA...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAAGCTCAATTTCTTCATaGAGAACCTGGGTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPESSISS*RTWVSG
Trigger: GCCTGAGACCCAGGTTCTTCATGAAGAAATTGAGCT...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGCTGTCTTGTCCCAGATaGATGTGTAGGCTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRLSCPR*MCRLGW
Trigger: CCAACCTAGCCTACACATTCATCTGGGACAAGACAG...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTAGTAGCAGATGCAGTTaGCATCGTTTTTGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLSSRCS*HRFCSH
Trigger: GTGACTGCAAAAACGATGTCAACTGCATCTGCTACT...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGAGTAGCAGATGCAGTTaGCATCGTTTTTGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVSSRCS*HRFCSH
Trigger: GTGACTGCAAAAACGATGTCAACTGCATCTGCTACT...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGAGACTCACAGTGTACTaGTGGATACCATCAGCGTTG +
Preference number: 4 (lower is better)
Translates to: ATDTHKLRILNRLHPVTARLTVY*WIPSAL
Trigger: CAACGCTGATGGTATCCATCAGTACACTGTGAGTCT...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGTAAGGGTGATAATCTaGTTATCAGGCATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVVRVII*LSGMSR
Trigger: CCTGCTCATGCCTGATAATCAGATTATCACCCTTAC...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTAGTCAAAGATGACTaGTGCATTGCTTTCGGGTGG +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQVVKDD*CIAFGW
Trigger: CCACCCGAAAGCAATGCATCAGTCATCTTTGACTAC...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTCAACCTTTCGGTACCTaGTGGTACAGGAGAAACCCC +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFQPFGT*WYRRNP
Trigger: GGGGTTTCTCCTGTACCATCAGGTACCGAAAGGTTG...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCAATGATGTTGCTGAGCTaGAATCCAAACATCACAAGC +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSMMLLS*NPNITS
Trigger: GCTTGTGATGTTTGGATTTCAGCTCAGCAACATCAT...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCATGGACAAGCCAGAGCTaGGCCTGGATTTTATCCCTC +
Preference number: 4 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPWTSQS*AWILSL
Trigger: GAGGGATAAAATCCAGGCGCAGCTCTGGCTTGTCCA...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGCATTGCTATGAAATATaGCAGCAAAATGGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQHCYEI*QQNGQE
Trigger: CTCTTGGCCATTTTGCTGGCATATTTCATAGCAATG...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCATCCGAGCAGATGCATTaGTATGAAATATGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSSEQMH*YEICQQ
Trigger: TTGCTGGCATATTTCATAGCAATGCATCTGCTCGGA...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCATTGAGTCCGAGCAGATaGATTGCTATGAAATATGCC +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSLSPSR*IAMKYA
Trigger: GGCATATTTCATAGCAATGCATCTGCTCGGACTCAA...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTCTTCGCCACTGTCTATaGTGCTGTTTTTCAATGACC +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLLRHCL*CCFSMT
Trigger: GGTCATTGAAAAACAGCAGCATAGACAGTGGCGAAG...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGCCATCTCCTTGTCCTTaGCGTCATTGTAGAAGGCCA +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRPSPCP*RHCRRP
Trigger: TGGCCTTCTACAATGACGGCAAGGACAAGGAGATGG...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAGTCAGGGAGGTAAGTaGCATGCCCACTACACTGGT +
Preference number: 4 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPSQGGK*HAHYTG
Trigger: ACCAGTGTAGTGGGCATGGCACTTACCTCCCTGACT...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACTCGGCATTCACATTTaGCATCTTTACAGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPELGIHI*HLYRSR
Trigger: ACGGGACCTGTAAAGATGGCAAATGTGAATGCCGAG...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGATAGAAGGACTTCACTaGAGGCCAGTCTGTCTGACC +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRIEGLH*RPVCLT
Trigger: GGTCAGACAGACTGGCCTGCAGTGAAGTCCTTCTAT...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAACCCATTCTTGTCTACTaGAATACCTCTGGGGCTCAT +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQPILVY*NTSGAH
Trigger: ATGAGCCCCAGAGGTATTGCAGTAGACAAGAATGGG...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGGCAGGGTTCCATTATTaGAGAGCTGGTAGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: ATDTHKLRILNRLHPVTAAGFHY*RAGSCF
Trigger: GAAACAGCTACCAGCTCTGCAATAATGGAACCCTGC...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGAAGATGTCTTTAGGATaGGGCCGTCATCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVKMSLG*GRHHCS
Trigger: ACTACAGTGATGACGGCCGCATCCTAAAGACATCTT...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACGAAGTGTTCCACCTTaGCGGAAATCTCATCATAGC +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPERSVPP*RKSHHS
Trigger: GCTATGATGAGATTTCCGGCAAGGTGGAACACTTCG...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGCTGGCCTTGTTGTATaGTCTTGTCAGAAGGCCCTT +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRAGLVV*SCQKAL
Trigger: AAGGGCCTTCTGACAAGAGCATACAACAAGGCCAGC...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGCTGTGTACTGCAGTTaGTTGATCATGAGGCCATTG +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQAVYCS*LIMRPL
Trigger: CAATGGCCTCATGATCAAGCAACTGCAGTACACAGC...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCATGTCCAGAGAGGAGCTaGTGTAGCGACACTCTTTGC +
Preference number: 4 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPCPERS*CSDTLC
Trigger: GCAAAGAGTGTCGCTACACCAGCTCCTCTCTGGACA...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGCACTTTGCCTCCAGATaGCACTGTTGCCACATCATC +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRHFASR*HCCHII
Trigger: GATGATGTGGCAACAGTGCCATCTGGAGGCAAAGTG...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATCCAAAACACCCCTGGTaGGACTTCCTGTGTCACCCG +
Preference number: 4 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANPKHPW*DFLCHP
Trigger: CGGGTGACACAGGAAGTCCCACCAGGGGTGTTTTGG...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTAGGGAGTCCCATCCATaGTTACTACTTGGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFRESHP*LLLGLG
Trigger: TCCGAGGCCAAGTAGTAACCATGGATGGGACTCCCT...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGAGGCAGAACCCCCATTaGCAATCAGATCAAACGTGC +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRRQNPH*QSDQTC
Trigger: GCACGTTTGATCTGATTGCCAATGGGGGTTCTGCCT...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTATAGAAGCTGTTCCATaGCAGCCACACTGTGCGCTC +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFIEAVP*QPHCAL
Trigger: GAGCGCACAGTGTGGCTGCCATGGAACAGCTTCTAT...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGATGATGATTGGATCTaGCCGGACAAAGCCACTGAG +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRDDDWI*PDKATE
Trigger: CTCAGTGGCTTTGTCCGGCCAGATCCAATCATCATC...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGAGAGGAGATGATGATTaGATCTGGCCGGACAAAGCC +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRRGDDD*IWPDKA
Trigger: GGCTTTGTCCGGCCAGATCCAATCATCATCTCCTCT...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTAACGGAGCTTCACATTaGTACCAGGGAGCTCAATTT +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLNGASH*YQGAQF
Trigger: AAATTGAGCTCCCTGGTACCAATGTGAAGCTCCGTT...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGCCTGGAATGACTTCTaGAAGAGATGCCCCTCTACA +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRAWNDF*KRCPST
Trigger: TGTAGAGGGGCATCTCTTCCAGAAGTCATTCCAGGC...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCAGTAACTCCAAGATACTaGTCACATTTCGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSVTPRY*SHFERE
Trigger: TTCCCTCTCGAAATGTGACCAGTATCTTGGAGTTAC...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGGAGATGATTCCGTTTTaGTCCACCTTCCGGATCATG +
Preference number: 4 (lower is better)
Translates to: ATDTHKLRILNRLHPVTAEMIPF*STFRIM
Trigger: CATGATCCGGAAGGTGGACCAAAACGGAATCATCTC...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAGTTTCATCACTCTTaGTGGCTAGGAGTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPEQFHHS*WLGVQC
Trigger: ACACTGGACTCCTAGCCACCAAGAGTGATGAAACTG...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGCGTCATCATCCCGGTTaGAGTTCTCAATGTCAATGG +
Preference number: 4 (lower is better)
Translates to: ATDTHKLRILNRLHPVTARHHPG*SSQCQW
Trigger: CCATTGACATTGAGAACTCCAACCGGGATGATGACG...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTTCAGGCCATTCTCCATaGGCAGAGAGATGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFSGHSP*AERCCS
Trigger: GCTGCAACATCTCTCTGCCCATGGAGAATGGCCTGA...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCATTCGGTCATAATCAATaGACAGGAGATTCCTTCCGT +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSFGHNQ*TGDSFR
Trigger: ACGGAAGGAATCTCCTGTCCATTGATTATGACCGAA...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGTGTACTTTGTGGTGTTaGCATAGGGCCCTAGTTTCA +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVCTLWC*HRALVS
Trigger: TGAAACTAGGGCCCTATGCCAACACCACAAAGTACA...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGTTGTCAGAAGGCCCTTaGAGTTGTATTCAAAGATGT +
Preference number: 4 (lower is better)
Translates to: ICGRALVYFRMRDFALRQLSEGP*SCIQRC
Trigger: ACATCTTTGAATACAACTCCAAGGGCCTTCTGACAA...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGACCATCTGGAAGTCTaGATTGGAGTCATAGTAGAT +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCDHLEV*IGVIVD
Trigger: ATCTACTATGACTCCAATCCAGACTTCCAGATGGTC...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTAAGCCAATGACCATCTaGAAGTCTGGATTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLKPMTI*KSGLES
Trigger: TGACTCCAATCCAGACTTCCAGATGGTCATTGGCTT...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACTCTCAGTTGTCTGCTaGACACCTGTAATGAGCTGT +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPELSVVC*TPVMSC
Trigger: ACAGCTCATTACAGGTGTCCAGCAGACAACTGAGAG...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAGTGGTAGCAAACCAGTaGCCTGCTTTCTCTCGGATG +
Preference number: 4 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPVVANQ*PAFSRM
Trigger: CATCCGAGAGAAAGCAGGCCACTGGTTTGCTACCAC...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp CCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAAGATTACATTCACCAGCAGCGTaGGCTGTGACACCGTCACGT +
Preference number: 4 (lower is better)
Translates to: PCNCVLLSTMESPKTKRLHSPAA*AVTPSR
Trigger: ACGTGACGGTGTCACAGCCCACGCTGCTGGTGAATG...TAATCTTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCATGCTCTGAGCAGGTATaGATTGGGGGAGAATTCCTC +
Preference number: 4 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPCSEQV*IGGEFL
Trigger: GAGGAATTCTCCCCCAATTCATACCTGCTCAGAGCA...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGCAGATGCATTGCTATaGAATATGCCAGCAAAATGG +
Preference number: 4 (lower is better)
Translates to: PFLLAILRLFSALDPEQVADALL*NMPAKW
Trigger: CCATTTTGCTGGCATATTTCATAGCAATGCATCTGC...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAATGCCCAGGGAGATGTTaGACTTTAAGAATTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQCPGRC*TLRIEA
Trigger: AGCCTCAATTCTTAAAGTTCAACATCTCCCTGGGCA...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCATGCGCCGGATATAGTTaGAGTCACCAACAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPCAGYS*SHQQRG
Trigger: GCCTCTTTGTTGGTGACTTCAACTATATCCGGCGCA...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCATATTCAAATATGTACTaGCGTTGGCTCTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSYSNMY*RWLCSR
Trigger: TCTGCTACAGAGCCAACGTCAGTACATATTTGAATA...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGTATTCAAAGATGTCTaGCCCTCTCTGGCACAAATA +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLVFKDV*PSLAQI
Trigger: TATTTGTGCCAGAGAGGGTCAGACATCTTTGAATAC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTCATAGTAGAGCGAGGTaGTCTCAGAGTTGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFHSRAR*SQSWSG
Trigger: ACCACTCCAACTCTGAGATCACCTCGCTCTACTATG...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTAAAGGTGTGTCCATCTaGCGGCTGGAGTTGCCAATT +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFKGVSI*RLELPI
Trigger: AATTGGCAACTCCAGCCGGCAGATGGACACACCTTT...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCATCCAGATGGCACTGTTaGCACATCATCGTTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPSRWHC*HIIVSW
Trigger: CCAGGAAACGATGATGTGGCAACAGTGCCATCTGGA...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGCGCCACTGTCTATGCTaGTGTTTTTCAATGACCAGG +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRRHCLC*CFSMTR
Trigger: CCTGGTCATTGAAAAACAGCAGCATAGACAGTGGCG...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACTTCGCCACTGTCTATaGTGCTGTTTTTCAATGACC +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPELRHCL*CCFSMT
Trigger: GGTCATTGAAAAACAGCAGCATAGACAGTGGCGAAG...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp CCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAAGATTATGCAGACGCCGTGAGTaGCACAGTCTACTGAGCACA +
Preference number: 4 (lower is better)
Translates to: PCNCVLLSTMESPKTKRLCRRRE*HSLLST
Trigger: TGTGCTCAGTAGACTGTGGCACTCACGGCGTCTGCA...TAATCTTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTTGCCTCTCAGTTGTCTaGTGGACACCTGTAATGAGC +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFCLSVV*WTPVMS
Trigger: GCTCATTACAGGTGTCCAGCAGACAACTGAGAGGCA...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCACCTTCAAGGTCTCGCTaGAACTGTAGGACTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPPSRSR*NCRTSE
Trigger: CTCAGAAGTCCTACAGTTCCAGCGAGACCTTGAAGG...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTCACTTTGCCTCCAGATaGCACTGTTGCCACATCATC +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFHFASR*HCCHII
Trigger: GATGATGTGGCAACAGTGCCATCTGGAGGCAAAGTG...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGAAGGATCGATACATTaGTTCATAGGCACATCGCAC +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQEGSIH*FIGTSH
Trigger: GTGCGATGTGCCTATGAACCAATGTATCGATCCTTC...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGTTACCAGGGTGTCCATaGCATAGAAGCTGTTCCATG +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRLPGCP*HRSCSM
Trigger: CATGGAACAGCTTCTATGCCATGGACACCCTGGTAA...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTAGAGGAGATGATGATTaGATCTGGCCGGACAAAGCC +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFRGDDD*IWPDKA
Trigger: GGCTTTGTCCGGCCAGATCCAATCATCATCTCCTCT...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGCAGTTTCATCACTCTTaGTGGCTAGGAGTCCAGTGT +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRQFHHS*WLGVQC
Trigger: ACACTGGACTCCTAGCCACCAAGAGTGATGAAACTG...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAAGATTAAGGAGATTCCTTCCGTaGACCCGAAGCTTCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PCNCVLLSTMESPKTKRLRRFLP*TRSFLP
Trigger: TGGGAGGAAGCTTCGGGTCCACGGAAGGAATCTCCT...TAATCTTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp CCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAAGATTAGCACGCTCCATCCGCTaGCCTTGTTGTATGCTCTTG +
Preference number: 4 (lower is better)
Translates to: PCNCVLLSTMESPKTKRLARSIR*PCCMLL
Trigger: CAAGAGCATACAACAAGGCCAGCGGATGGAGCGTGC...TAATCTTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGCACAAAATACATTTTaGCTCTCGGGAATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLAQNTF*LSGIQE
Trigger: TTCCTGGATTCCCGAGAGCCAAAATGTATTTTGTGC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGTCTCGGATGCTGGCATaGAGCTTTTTAGTGATGACC +
Preference number: 4 (lower is better)
Translates to: FLFFLRICGRALVYFRMRSRMLA*SFLVMT
Trigger: GGTCATCACTAAAAAGCTCCATGCCAGCATCCGAGA...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCCATATTTTGGGTACTTaGCAAAAGACACATTCACAC +
Preference number: 4 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCHILGT*QKTHSH
Trigger: GTGTGAATGTGTCTTTTGTCAAGTACCCAAAATATG...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTACAGCAACCATCAAGTaGACCCTGATGAGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFTATIK*TLMRFK
Trigger: CTTGAACCTCATCAGGGTTCACTTGATGGTTGCTGT...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATTTTTCTCCCACAGGATaGGACTGGGGCAGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANFSPTG*DWGRSH
Trigger: ATGAGACCTGCCCCAGTCTCATCCTGTGGGAGAAAA...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTATTCAAATATGTACTaGCGTTGGCTCTGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLYSNMY*RWLCSR
Trigger: TCTGCTACAGAGCCAACGTCAGTACATATTTGAATA...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATCTCCGTGGAAGCCAATaGCCATCTGGAAGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANLRGSQ*PSGSLD
Trigger: ATCCAGACTTCCAGATGGTCATTGGCTTCCACGGAG...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAATTCCATAGTGCATTCTaGTGTCATGGTCATAAGCCT +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPEFHSAF*CHGHKP
Trigger: AGGCTTATGACCATGACAGCAGAATGCACTATGGAA...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAATTCCATAGTGCATTCTaGTGTCATGGTCATAAGCCT +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQFHSAF*CHGHKP
Trigger: AGGCTTATGACCATGACAGCAGAATGCACTATGGAA...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTTCTGATGGGAGGTGTTaGTGTCTAGCAATGGCATCT +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFSDGRC*CLAMAS
Trigger: AGATGCCATTGCTAGACAGCAACACCTCCCATCAGA...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGTTGAGTCCGAGCAGATaGATTGCTATGAAATATGCC +
Preference number: 4 (lower is better)
Translates to: ATDTHKLRILNRLHPVTALSPSR*IAMKYA
Trigger: GGCATATTTCATAGCAATGCATCTGCTCGGACTCAA...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCACGCCACTGTCTATGCTaGTGTTTTTCAATGACCAGG +
Preference number: 4 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPRHCLC*CFSMTR
Trigger: CCTGGTCATTGAAAAACAGCAGCATAGACAGTGGCG...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAGCTGTGTACTGCAGTTaGTTGATCATGAGGCCATTG +
Preference number: 4 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPAVYCS*LIMRPL
Trigger: CAATGGCCTCATGATCAAGCAACTGCAGTACACAGC...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAGTAGCAGAAGGACCATaGACTTGTCAAGATAGGAAT +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPEVAEGP*TCQDRN
Trigger: ATTCCTATCTTGACAAGTCCATGGTCCTTCTGCTAC...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAATGCATTGCTTTCGGGTaGGTTGTAAATGTTTCGGAT +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQCIAFG*VVNVSD
Trigger: ATCCGAAACATTTACAACCCACCCGAAAGCAATGCA...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAAGATTATCTTCAGGACACCGGTaGTCTCGTCATACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: PCNCVLLSTMESPKTKRLSSGHR*SRHTQR
Trigger: CCTTTGGGTATGACGAGACCACCGGTGTCCTGAAGA...TAATCTTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAGCACAAAATACATTTTaGCTCTCGGGAATCCAGGAA +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPEAQNTF*LSGIQE
Trigger: TTCCTGGATTCCCGAGAGCCAAAATGTATTTTGTGC...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATTTGGTGTCCATGATCTaGTGGGAGGTGTTGCTGTCT +
Preference number: 4 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANLVSMI*WEVLLS
Trigger: AGACAGCAACACCTCCCATCAGATCATGGACACCAA...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATTGCCATCCTGGCGAGTaGTGGTGTAGCCATATTTTG +
Preference number: 4 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANCHPGE*WCSHIL
Trigger: CAAAATATGGCTACACCATCACTCGCCAGGATGGCA...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp CCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAAGATTACATATTGCACTTCCTTaGTGCGCCCATGGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: PCNCVLLSTMESPKTKRLHIALP*CAHGCQ
Trigger: TTGACACCCATGGGCGCATCAAGGAAGTGCAATATG...TAATCTTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp CCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAAGATTACATAGTAGAGCGAGGTaGTCTCAGAGTTGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: PCNCVLLSTMESPKTKRLHSRAR*SQSWSG
Trigger: ACCACTCCAACTCTGAGATCACCTCGCTCTACTATG...TAATCTTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATGACTTCTGGAAGAGATaGCCCTCTACAGCAACCATC +
Preference number: 4 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANDFWKR*PSTATI
Trigger: GATGGTTGCTGTAGAGGGGCATCTCTTCCAGAAGTC...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAGATATTCCCAAGGTCTaGAATGTAGATGGTGCCATC +
Preference number: 4 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPDIPKV*NVDGAI
Trigger: GATGGCACCATCTACATTGCAGACCTTGGGAATATC...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp CCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAAGATTACCATGGGTGTCAAAGTaGTTGCTAAGCGTCATGACG +
Preference number: 4 (lower is better)
Translates to: PCNCVLLSTMESPKTKRLPWVSK*LLSVMT
Trigger: CGTCATGACGCTTAGCAAGCACTTTGACACCCATGG...TAATCTTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAGGTGTAGCCATATTTTaGGTACTTGACAAAAGACAC +
Preference number: 4 (lower is better)
Translates to: SVPFLLAILRLFSALDPEGVAIF*VLDKRH
Trigger: GTGTCTTTTGTCAAGTACCCAAAATATGGCTACACC...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAAGATTATTCACATTGAGGGTGTaGTGTTTGTCCAGGGACCAG +
Preference number: 4 (lower is better)
Translates to: PCNCVLLSTMESPKTKRLFTLRV*CLSRDQ
Trigger: CTGGTCCCTGGACAAACACCACACCCTCAATGTGAA...TAATCTTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGTAATACTTGTGTCCTaGGCTGTTGCTATGTTTAAA +
Preference number: 4 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLVILVS*AVAMFK
Trigger: TTTAAACATAGCAACAGCCCAGGACACAAGTATTAC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAATTGTCAGAAGGCCCTTaGAGTTGTATTCAAAGATGT +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQLSEGP*SCIQRC
Trigger: ACATCTTTGAATACAACTCCAAGGGCCTTCTGACAA...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAATTCTGTCTTAAGAACTaGATGTTGCTGCTACTGTCT +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQFCLKN*MLLLLS
Trigger: AGACAGTAGCAGCAACATCCAGTTCTTAAGACAGAA...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTGTATTCAAAGATGTCTaGCCCTCTCTGGCACAAATA +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFVFKDV*PSLAQI
Trigger: TATTTGTGCCAGAGAGGGTCAGACATCTTTGAATAC...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR GCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTTCCGAGCAGATGCATTaGTATGAAATATGCCAGCAA +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFSEQMH*YEICQQ
Trigger: TTGCTGGCATATTTCATAGCAATGCATCTGCTCGGA...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAGTAACTCCAAGATACTaGTCACATTTCGAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPVTPRY*SHFERE
Trigger: TTCCCTCTCGAAATGTGACCAGTATCTTGGAGTTAC...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTAATACTTGTGTCCTaGGCTGTTGCTATGTTTAAA +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQVILVS*AVAMFK
Trigger: TTTAAACATAGCAACAGCCCAGGACACAAGTATTAC...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTGTAGCAGAAGGACCATaGACTTGTCAAGATAGGAAT +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFVAEGP*TCQDRN
Trigger: ATTCCTATCTTGACAAGTCCATGGTCCTTCTGCTAC...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp CCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAAGATTAGAGAAACCCCCACTTTaGAGATTGACCATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PCNCVLLSTMESPKTKRLEKPPL*RLTIFR
Trigger: CCTGAAGATGGTCAATCTCCAAAGTGGGGGTTTCTC...TAATCTTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp CCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAAGATTATCTCGGATGCTGGCATaGAGCTTTTTAGTGATGACC +
Preference number: 4 (lower is better)
Translates to: PCNCVLLSTMESPKTKRLSRMLA*SFLVMT
Trigger: GGTCATCACTAAAAAGCTCCATGCCAGCATCCGAGA...TAATCTTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp CCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAAGATTAGTAAGGGTGATAATCTaGTTATCAGGCATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PCNCVLLSTMESPKTKRLVRVII*LSGMSR
Trigger: CCTGCTCATGCCTGATAATCAGATTATCACCCTTAC...TAATCTTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR GCA 90 bp CCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAAGATTAAAGATGTCTTTAGGATaGGGCCGTCATCACTGTAGT +
Preference number: 4 (lower is better)
Translates to: PCNCVLLSTMESPKTKRLKMSLG*GRHHCS
Trigger: ACTACAGTGATGACGGCCGCATCCTAAAGACATCTT...TAATCTTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATAACGGAGCTTCACATTaGTACCAGGGAGCTCAATTT +
Preference number: 4 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANNGASH*YQGAQF
Trigger: AAATTGAGCTCCCTGGTACCAATGTGAAGCTCCGTT...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CCA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAACTATCTCTGATAACTTaGAGAGTTTTCCATACTTGT +
Preference number: 4 (lower is better)
Translates to: VPFLLAILRLFSALDPEQLSLIT*RVFHTC
Trigger: ACAAGTATGGAAAACTCTCCAAGTTATCAGAGATAG...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR TCA 90 bp CCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAAGATTAGCAGATGCATTGCTATaGAATATGCCAGCAAAATGG +
Preference number: 4 (lower is better)
Translates to: PCNCVLLSTMESPKTKRLADALL*NMPAKW
Trigger: CCATTTTGCTGGCATATTTCATAGCAATGCATCTGC...TAATCTTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR TCA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTCATATTTTGGGTACTTaGCAAAAGACACATTCACAC +
Preference number: 4 (lower is better)
Translates to: SALDPEQVGHILGELETFHILGT*QKTHSH
Trigger: GTGTGAATGTGTCTTTTGTCAAGTACCCAAAATATG...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CCA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATGGTGTAGCCATATTTTaGGTACTTGACAAAAGACAC +
Preference number: 4 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANGVAIF*VLDKRH
Trigger: GTGTCTTTTGTCAAGTACCCAAAATATGGCTACACC...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
3UTR CAA 72 bp TTAGAATATGAGGCCTTCTCGTCTTCATTTCTTCGTTaGTATGGTCGGTGTCTTTGTCTTTTTGTTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LEYEAFSSSFLR*YGRCLCLFVCF
Trigger: AAAGCAAACAAAAAGACAAAGACACCGACCATACAAACGAAGAAATGAAGACGAGAAGGCCTCATATTCTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS CCA 90 bp TGCTGCTCCTTGGCCCAGGCAGTACCCAGGGCTCTCTGTCTCGCTTaGTCCAGGACGCGGGCCTTTTCTTCGTCCAGCGTGTCGGGGGTG +
Preference number: 5 (lower is better)
Translates to: CCSLAQAVPRALCLA*SRTRAFSSSSVSGV
Trigger: CACCCCCGACACGCTGGACGAAGAAAAGGCCCGCGTCCTGGACCAAGCGAGACAGAGAGCCCTGGGTACTGCCTGGGCCAAGGAGCAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACCTCGCCAGCTCACAGTaGAGACCACCCCAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHLASSQ*RPPQPG
Trigger: CCCCGGCTGGGGTGGTCTCAACTGTGAGCTGGCGAG...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 90 bp GGGCGCAGGAGCTGGGGCGTGGATTTGACTCCGCCGATTGGTCAGTaGGTTCCTGTTGAGGGAGTTGGCCGAGGAGTGGTGGTGGGACAG +
Preference number: 5 (lower is better)
Translates to: GRRSWGVDLTPPIGQ*VPVEGVGRGVVVGQ
Trigger: CTGTCCCACCACCACTCCTCGGCCAACTCCCTCAACAGGAACTCACTGACCAATCGGCGGAGTCAAATCCACGCCCCAGCTCCTGCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 90 bp GCCCACTACACTGGTCTGGGCACTGGACCCTCGCCAGCTCACAGTTaGGACCACCCCAGCCGGGGCTGCATAGACACTCTCCATTCACAC +
Preference number: 5 (lower is better)
Translates to: AHYTGLGTGPSPAHS*DHPSRGCIDTLHSH
Trigger: GTGTGAATGGAGAGTGTCTATGCAGCCCCGGCTGGGGTGGTCTCAACTGTGAGCTGGCGAGGGTCCAGTGCCCAGACCAGTGTAGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp CTCCAGACTTTCCCGTCGGCGAACATGCGGGACACGATCCGGCCTTaGTTGTCAATGTCTGTCCTCTCGCTCATGGCCCCTCGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: LQTFPSANMRDTIRP*LSMSVLSLMAPRWR
Trigger: CCTCCAGCGAGGGGCCATGAGCGAGAGGACAGACATTGACAAGCAAGGCCGGATCGTGTCCCGCATGTTCGCCGACGGGAAAGTCTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp AGCTATCCTGGAGCTGAACAGACTCTGGGGTGGTGGCCAGGTCGTTaGGCGCAGGAGCTGGGGCGTGGATTTGACTCCGCCGATTGGTCA +
Preference number: 5 (lower is better)
Translates to: SYPGAEQTLGWWPGR*AQELGRGFDSADWS
Trigger: TGACCAATCGGCGGAGTCAAATCCACGCCCCAGCTCCTGCGCCCAACGACCTGGCCACCACCCCAGAGTCTGTTCAGCTCCAGGATAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp TGTTCAGCACCCAGCTATCCTGGAGCTGAACAGACTCTGGGGTGGTaGCCAGGTCGTTGGGCGCAGGAGCTGGGGCGTGGATTTGACTCC +
Preference number: 5 (lower is better)
Translates to: CSAPSYPGAEQTLGW*PGRWAQELGRGFDS
Trigger: GGAGTCAAATCCACGCCCCAGCTCCTGCGCCCAACGACCTGGCCACCACCCCAGAGTCTGTTCAGCTCCAGGATAGCTGGGTGCTGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp TCCATGGGGTTGACGGCGAGGTCTGTCGGCCATTCTAGACGGACCTaGGCCACGTCCATGCTCGAGTCACAGCTCAGTGGTCGGACAGCT +
Preference number: 5 (lower is better)
Translates to: SMGLTARSVGHSRRT*ATSMLESQLSGRTA
Trigger: AGCTGTCCGACCACTGAGCTGTGACTCGAGCATGGACGTGGCCCAGGTCCGTCTAGAATGGCCGACAGACCTCGCCGTCAACCCCATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACGAGGGGGCCTCAGTGTaGACTGGCTGTGGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHEGASV*TGCGGL
Trigger: CAAACCACCACAGCCAGTCAACACTGAGGCCCCCTC...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACAGCTGGGGCGTGGATTaGACTCCGCCGATTGGTCAG +
Preference number: 5 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHSWGVD*TPPIGQ
Trigger: CTGACCAATCGGCGGAGTCAAATCCACGCCCCAGCT...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp TGCCACAGGCCCACATCCAAGTACTGCACAAACACAGCCTCGTTCTaGACCAGAGTCTGGATGCTCCGGCGTTCCCTGGGCGACTCGACC +
Preference number: 5 (lower is better)
Translates to: CHRPTSKYCTNTASF*TRVWMLRRSLGDST
Trigger: GGTCGAGTCGCCCAGGGAACGCCGGAGCATCCAGACTCTGGTGCAGAACGAGGCTGTGTTTGTGCAGTACTTGGATGTGGGCCTGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 90 bp TCACCCCACTCTCCAGCACCTTGCGCCCAATGGTGGTTCCTAGCGTaGCCAGGTCACCATCCGCGGCGCCGATCTTCACAAAGTAGTGTG +
Preference number: 5 (lower is better)
Translates to: SPHSPAPCAQWWFLA*PGHHPRRRSSQSSV
Trigger: CACACTACTTTGTGAAGATCGGCGCCGCGGATGGTGACCTGGTCACGCTAGGAACCACCATTGGGCGCAAGGTGCTGGAGAGTGGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp CTGGAGACATCCCTCCCTCGGTGTCCGAGTCTGCATCAGACCCAGTaGTCAGGGAGTAGCCCTGGTGGAGGATACCCATGTCGGAACAGT +
Preference number: 5 (lower is better)
Translates to: LETSLPRCPSLHQTQ*SGSSPGGGYPCRNS
Trigger: ACTGTTCCGACATGGGTATCCTCCACCAGGGCTACTCCCTGAGCACTGGGTCTGATGCAGACTCGGACACCGAGGGAGGGATGTCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp ACACAGCCTCGTTCTGCACCAGAGTCTGGATGCTCCGGCGTTCCCTaGGCGACTCGACCACGCTCCATTTCTCCTTTCCATCCAGGCGTT +
Preference number: 5 (lower is better)
Translates to: TQPRSAPESGCSGVP*ATRPRSISPFHPGV
Trigger: AACGCCTGGATGGAAAGGAGAAATGGAGCGTGGTCGAGTCGCCCAGGGAACGCCGGAGCATCCAGACTCTGGTGCAGAACGAGGCTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp TGGTGCCATCTGGAGCCACGGCTAAGGAGGACGGCGAGTTTAGGATaGCGTCCGTGGCGTAAGCGTCATCTCCCGAGTAGCAGATGCAGT +
Preference number: 5 (lower is better)
Translates to: WCHLEPRLRRTASLG*RPWRKRHLPSSRCS
Trigger: ACTGCATCTGCTACTCGGGAGATGACGCTTACGCCACGGACGCCATCCTAAACTCGCCGTCCTCCTTAGCCGTGGCTCCAGATGGCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp GGTTGTGGAGGTCGGAGTAGAAGTACTGTAGGTGGTGGCCCAGGTTaGTCTTGTAGGAAGCCCGGCGGCCCACTCCGTCATAGCGGTACT +
Preference number: 5 (lower is better)
Translates to: GCGGRSRSTVGGGPG*SCRKPGGPLRHSGT
Trigger: AGTACCGCTATGACGGAGTGGGCCGCCGGGCTTCCTACAAGACCAACCTGGGCCACCACCTACAGTACTTCTACTCCGACCTCCACAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACCATCTCCCGTTACCGTaGCACAAATCAGGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHHLPLP*HKSGQP
Trigger: TGGCTGCCCTGATTTGTGCAACGGTAACGGGAGATG...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACGGACACGATCCGGCCTaGCTTGTCAATGTCTGTCCT +
Preference number: 5 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHGHDPA*LVNVCP
Trigger: AGGACAGACATTGACAAGCAAGGCCGGATCGTGTCC...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 90 bp CTGGGGCGTGGATTTGACTCCGCCGATTGGTCAGTGAGTTCCTGTTaGGGGAGTTGGCCGAGGAGTGGTGGTGGGACAGGGTGTGGTTAT +
Preference number: 5 (lower is better)
Translates to: LGRGFDSADWSVSSC*GSWPRSGGGTGCGY
Trigger: ATAACCACACCCTGTCCCACCACCACTCCTCGGCCAACTCCCTCAACAGGAACTCACTGACCAATCGGCGGAGTCAAATCCACGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp GGCAGTCCTCACTGTCCAGAGAGGAGCTGGTGTAGCGACACTCTTTaGCACACCGTCCCCTGGTCAAAGAGCGATGTCGCCGGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: GSPHCPERSWCSDTL*HTVPWSKSDVAGPL
Trigger: TAAAGGACCGGCGACATCGCTCTTTGACCAGGGGACGGTGTGGCAAAGAGTGTCGCTACACCAGCTCCTCTCTGGACAGTGAGGACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp TCTGATGGCATGTTCTGGAGACATCCCTCCCTCGGTGTCCGAGTCTaGATCAGACCCAGTGCTCAGGGAGTAGCCCTGGTGGAGGATACC +
Preference number: 5 (lower is better)
Translates to: SDGMFWRHPSLGVRV*IRPSAQGVALVEDT
Trigger: GGTATCCTCCACCAGGGCTACTCCCTGAGCACTGGGTCTGATGCAGACTCGGACACCGAGGGAGGGATGTCTCCAGAACATGCCATCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp CCAAGTACTGCACAAACACAGCCTCGTTCTGCACCAGAGTCTGGATaGTCCGGCGTTCCCTGGGCGACTCGACCACGCTCCATTTCTCCT +
Preference number: 5 (lower is better)
Translates to: PSTAQTQPRSAPESG*SGVPWATRPRSISP
Trigger: AGGAGAAATGGAGCGTGGTCGAGTCGCCCAGGGAACGCCGGAGCATCCAGACTCTGGTGCAGAACGAGGCTGTGTTTGTGCAGTACTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp AGCACACAACAGAGCAGTCGGGACCCATCCAGTTCGGATCACAGCTaGAGAGGCCGGAGTCAGGGAGGTAAGTGCCATGCCCACTACACT +
Preference number: 5 (lower is better)
Translates to: STQQSSRDPSSSDHS*RGRSQGGKCHAHYT
Trigger: AGTGTAGTGGGCATGGCACTTACCTCCCTGACTCCGGCCTCTGCAGCTGTGATCCGAACTGGATGGGTCCCGACTGCTCTGTTGTGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp ACTTCTGAGTGGGCACACGGCAGTCCTCACTGTCCAGAGAGGAGCTaGTGTAGCGACACTCTTTGCCACACCGTCCCCTGGTCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: TSEWAHGSPHCPERS*CSDTLCHTVPWSKS
Trigger: GCTCTTTGACCAGGGGACGGTGTGGCAAAGAGTGTCGCTACACCAGCTCCTCTCTGGACAGTGAGGACTGCCGTGTGCCCACTCAGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp CCCGGCGGCCCACTCCGTCATAGCGGTACTGCACGCTCCATCCGCTaGCCTTGTTGTATGCTCTTGTCAGAAGGCCCTTGGAGTTGTATT +
Preference number: 5 (lower is better)
Translates to: PGGPLRHSGTARSIR*PCCMLLSEGPWSCI
Trigger: AATACAACTCCAAGGGCCTTCTGACAAGAGCATACAACAAGGCCAGCGGATGGAGCGTGCAGTACCGCTATGACGGAGTGGGCCGCCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACCTCCAGATGGCACTGTaGCCACATCATCGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHLQMAL*PHHRFL
Trigger: CAGGAAACGATGATGTGGCAACAGTGCCATCTGGAG...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACTCGCTAATGACGGGTTaGATGCTGGCAATGCGGAAG +
Preference number: 5 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHSLMTG*MLAMRK
Trigger: CTTCCGCATTGCCAGCATCAAACCCGTCATTAGCGA...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACCCGGAACATCTCATATaGCACTTCCTTGATGCGCCC +
Preference number: 5 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHPEHLI*HFLDAP
Trigger: GGGCGCATCAAGGAAGTGCAATATGAGATGTTCCGG...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACCATCCGCTGGCCTTGTaGTATGCTCTTGTCAGAAGG +
Preference number: 5 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHHPLAL*YALVRR
Trigger: CCTTCTGACAAGAGCATACAACAAGGCCAGCGGATG...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACGCTGTCCGTTCTCGCTaGCTTGACTCTCTGACAGTT +
Preference number: 5 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHAVRSR*LDSLTV
Trigger: AACTGTCAGAGAGTCAAGCAAGCGAGAACGGACAGC...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACGTCACCCGCCCTTCTTaGATGGCAAACATGATGCCT +
Preference number: 5 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHVTRPS*MANMMP
Trigger: AGGCATCATGTTTGCCATCAAAGAAGGGCGGGTGAC...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 90 bp ACAAGCCAGAGCTGCGCCTGGATTTTATCCCTCGTCCCCACAGTCTaGTGGCATGTTCTGGAGACATCCCTCCCTCGGTGTCCGAGTCTG +
Preference number: 5 (lower is better)
Translates to: TSQSCAWILSLVPTV*WHVLETSLPRCPSL
Trigger: CAGACTCGGACACCGAGGGAGGGATGTCTCCAGAACATGCCATCAGACTGTGGGGACGAGGGATAAAATCCAGGCGCAGCTCTGGCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 90 bp TTGGAGGGCCACTGCTGGAGGCTTGCTGGGGCCCTGAGCATGCTCTaGGCAGGTATGAATTGGGGGAGAATTCCTCATCAGGGTTGGTGT +
Preference number: 5 (lower is better)
Translates to: LEGHCWRLAGALSML*AGMNWGRIPHQGWC
Trigger: ACACCAACCCTGATGAGGAATTCTCCCCCAATTCATACCTGCTCAGAGCATGCTCAGGGCCCCAGCAAGCCTCCAGCAGTGGCCCTCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 90 bp TGTATTCCGTGGCAGCAGGCGGGGTGGTGGTGTATAAACGGTCCCTaGGGTCAAAGGGTATCCCGGAGAAGAGCTGCTGAACAGGGGTGT +
Preference number: 5 (lower is better)
Translates to: CIPWQQAGWWCINGP*GQRVSRRRAAEQGC
Trigger: ACACCCCTGTTCAGCAGCTCTTCTCCGGGATACCCTTTGACCTCAGGGACCGTTTATACACCACCACCCCGCCTGCTGCCACGGAATACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 90 bp CATAGAAGGACTTCACTGCAGGCCAGTCTGTCTGACCTTGCTGAATaGTGTCCAAGGGGTCCCGAGACCCCCGGCAGAGCAGGCTGTTCT +
Preference number: 5 (lower is better)
Translates to: HRRTSLQASLSDLAE*CPRGPETPGRAGCS
Trigger: AGAACAGCCTGCTCTGCCGGGGGTCTCGGGACCCCTTGGACATCATTCAGCAAGGTCAGACAGACTGGCCTGCAGTGAAGTCCTTCTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp ACACTTCAACAGAGCAGTCGGGACCCATCCAGTTCGGATCACAGCTaGAGAGGCCGGAGTCAGGGAGGTAAGTGCCATGCCCACTACACT +
Preference number: 5 (lower is better)
Translates to: TLQQSSRDPSSSDHS*RGRSQGGKCHAHYT
Trigger: AGTGTAGTGGGCATGGCACTTACCTCCCTGACTCCGGCCTCTGCAGCTGTGATCCGAACTGGATGGGTCCCGACTGCTCTGTTGAAGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057207.6
CDS GCA 90 bp TCCAGCCGGTCTGGCAGACACACTGCCAGCTGTTCTGACCCAGTGTaGATCTCCCGTTACCGTTGCACAAATCAGGGCAGCCATCAATGG +
Preference number: 5 (lower is better)
Translates to: SSRSGRHTASCSDPV*ISRYRCTNQGSHQW
Trigger: CCATTGATGGCTGCCCTGATTTGTGCAACGGTAACGGGAGATGCACACTGGGTCAGAACAGCTGGCAGTGTGTCTGCCAGACCGGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp GCCCACGTTCCTCCACATGGTGTAGTCGGGGGACGTCCACCGTCCTaGCAGCACGTCATAATCACGTTGAGTAAAGTGGACGAGCTTGGT +
Preference number: 5 (lower is better)
Translates to: AHVPPHGVVGGRPPS*QHVIITLSKVDELG
Trigger: ACCAAGCTCGTCCACTTTACTCAACGTGATTATGACGTGCTGGCAGGACGGTGGACGTCCCCCGACTACACCATGTGGAGGAACGTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp ACATCCAAGTACTGCACAAACACAGCCTCGTTCTGCACCAGAGTCTaGATGCTCCGGCGTTCCCTGGGCGACTCGACCACGCTCCATTTC +
Preference number: 5 (lower is better)
Translates to: TSKYCTNTASFCTRV*MLRRSLGDSTTLHF
Trigger: GAAATGGAGCGTGGTCGAGTCGCCCAGGGAACGCCGGAGCATCCAGACTCTGGTGCAGAACGAGGCTGTGTTTGTGCAGTACTTGGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp CTCGGTCTTCATTACCAGGGTGTCCATGGCATAGAAGCTGTTCCATaGCAGCCACACTGTGCGCTCCTGGCTCATGAAAGGGGCTCGCTC +
Preference number: 5 (lower is better)
Translates to: LGLHYQGVHGIEAVP*QPHCALLAHERGSL
Trigger: GAGCGAGCCCCTTTCATGAGCCAGGAGCGCACAGTGTGGCTGCCATGGAACAGCTTCTATGCCATGGACACCCTGGTAATGAAGACCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACTCTCGGCATTCACATTaGCCATCTTTACAGGTCCCG +
Preference number: 5 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHSRHSH*PSLQVP
Trigger: CGGGACCTGTAAAGATGGCAAATGTGAATGCCGAGA...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTATGTGGGTGCTGTCCTaGCCTGCCAAGAGCTTGATG +
Preference number: 5 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRMWVLS*PAKSLM
Trigger: CATCAAGCTCTTGGCAGGCAAGGACAGCACCCACAT...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTTCCACGGAGGAGAGGTaGGTGATCACAGTGACGTCA +
Preference number: 5 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRSTEER*VITVTS
Trigger: TGACGTCACTGTGATCACCAACCTCTCCTCCGTGGA...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACTCATATTGCACTTCCTaGATGCGCCCATGGGTGTCA +
Preference number: 5 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHSYCTS*MRPWVS
Trigger: TGACACCCATGGGCGCATCAAGGAAGTGCAATATGA...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp GGTGTGCGTGGACATGCTGTGCCGGGCGACACTGGGCATAGTGACTaGGTGGAGGCGATCGGAGGAGTCATATTCAAATATGTACTGACG +
Preference number: 5 (lower is better)
Translates to: GVRGHAVPGDTGHSD*VEAIGGVIFKYVLT
Trigger: CGTCAGTACATATTTGAATATGACTCCTCCGATCGCCTCCACGCAGTCACTATGCCCAGTGTCGCCCGGCACAGCATGTCCACGCACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp GCCCTGGTGGAGGATACCCATGTCGGAACAGTAACCACTTCGGTGTaGGGAGGGCTCGCAGATTCCCAATTCTGCCAGGGTGAAGTTTGT +
Preference number: 5 (lower is better)
Translates to: ALVEDTHVGTVTTSV*GGLADSQFCQGEVC
Trigger: ACAAACTTCACCCTGGCAGAATTGGGAATCTGCGAGCCCTCCCCACACCGAAGTGGTTACTGTTCCGACATGGGTATCCTCCACCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp TTGAGGCTGACTGATGTGAATCTGGGACCTCCAAAACACCCCTGGTaGGACTTCCTGTGTCACCCGCCGACCAACTTCTGCTTCGCCACT +
Preference number: 5 (lower is better)
Translates to: LRLTDVNLGPPKHPW*DFLCHPPTNFCFAT
Trigger: AGTGGCGAAGCAGAAGTTGGTCGGCGGGTGACACAGGAAGTCCCACCAGGGGTGTTTTGGAGGTCCCAGATTCACATCAGTCAGCCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp GAATTGAGGCTGACTGATGTGAATCTGGGACCTCCAAAACACCCCTaGTGGGACTTCCTGTGTCACCCGCCGACCAACTTCTGCTTCGCC +
Preference number: 5 (lower is better)
Translates to: ELRLTDVNLGPPKHP*WDFLCHPPTNFCFA
Trigger: GGCGAAGCAGAAGTTGGTCGGCGGGTGACACAGGAAGTCCCACCAGGGGTGTTTTGGAGGTCCCAGATTCACATCAGTCAGCCTCAATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp CCCCAGCCGGGGCTGCATAGACACTCTCCATTCACACAGACACCATaGCTGGAGCAGGTAGGATCCAAGCAATCAACTTCCTCACAGTGC +
Preference number: 5 (lower is better)
Translates to: PQPGLHRHSPFTQTP*LEQVGSKQSTSSQC
Trigger: GCACTGTGAGGAAGTTGATTGCTTGGATCCTACCTGCTCCAGCCATGGTGTCTGTGTGAATGGAGAGTGTCTATGCAGCCCCGGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp TTTCCCGGTGCAGACTGGTCACTACGCCCGTGGGGCGGGTCACATTaGTCAGACGGCCCTCGTGGTCATAGTCATAAAAAGTTGTCCATC +
Preference number: 5 (lower is better)
Translates to: FPGADWSLRPWGGSH*SDGPRGHSHKKLSI
Trigger: GATGGACAACTTTTTATGACTATGACCACGAGGGCCGTCTGACCAATGTGACCCGCCCCACGGGCGTAGTGACCAGTCTGCACCGGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTCCTCAGCTGGTCTGGTGATGCCGGCCCTTGTGAATGTCTTTGTGTTGCTCACCCGAAGAGGGCATCCTaGCCCAGGGAGATGTTGAAC +
Preference number: 5 (lower is better)
Translates to: VLSWSGDAGPCECLCVAHPKRAS*PREMLN
Trigger: GTTCAACATCTCCCTGGGCAAGGATGCCCTCTTCGG...GTGAGCAACACAAAGACATTCACAAGGGCCGGCATCACCAGACCAGCTGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGCTCGCCAGCTCACAGTaGAGACCACCCCAGCCGGGG +
Preference number: 5 (lower is better)
Translates to: PFLLAILRLFSALDPEQVLASSQ*RPPQPG
Trigger: CCCCGGCTGGGGTGGTCTCAACTGTGAGCTGGCGAG...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 90 bp GGGCAGCGCATTTCCAACTGCAGTATTTGGAGGGTTTCTTCAGCTTaGAGGCCTTCCTGGAGAATGTATTCCGTGGCAGCAGGCGGGGTG +
Preference number: 5 (lower is better)
Translates to: GQRISNCSIWRVSSA*RPSWRMYSVAAGGV
Trigger: CACCCCGCCTGCTGCCACGGAATACATTCTCCAGGAAGGCCTTCAAGCTGAAGAAACCCTCCAAATACTGCAGTTGGAAATGCGCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 90 bp CTTGACTCGGTAGATTCGGCGACTGTTGGTGTCAGAGACGTAGAGTaGGCCGGTCACGGGGTCCACAGCCAAGTAATACTTGTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: LDSVDSATVGVRDVE*AGHGVHSQVILVSW
Trigger: CCAGGACACAAGTATTACTTGGCTGTGGACCCCGTGACCGGCTCACTCTACGTCTCTGACACCAACAGTCGCCGAATCTACCGAGTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp CTGCTGAACAGGGGTGTGCTTCCAGACGACGTCTTGAAAAGGAAGTaGCGAGTCTCCAGTGGGACGTTACTGTTCAGCACCCAGCTATCC +
Preference number: 5 (lower is better)
Translates to: LLNRGVLPDDVLKRK*RVSSGTLLFSTQLS
Trigger: GGATAGCTGGGTGCTGAACAGTAACGTCCCACTGGAGACTCGGCACTTCCTTTTCAAGACGTCGTCTGGAAGCACACCCCTGTTCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp CCTGTGTCACCCGCCGACCAACTTCTGCTTCGCCACTGTCTATGCTaGTGTTTTTCAATGACCAGGGCACTTTGCCTCCAGATGGCACTG +
Preference number: 5 (lower is better)
Translates to: PVSPADQLLLRHCLC*CFSMTRALCLQMAL
Trigger: CAGTGCCATCTGGAGGCAAAGTGCCCTGGTCATTGAAAAACAGCAGCATAGACAGTGGCGAAGCAGAAGTTGGTCGGCGGGTGACACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp GCAGCTAACTGGTGGAGGATTATGGGAGCTAGGCAGCTGAGCAGATaGGAGGAGGCTAGACGAGGATGTAGGTGGAATGGGACGACCATT +
Preference number: 5 (lower is better)
Translates to: AANWWRIMGARQLSR*EEARRGCRWNGTTI
Trigger: AATGGTCGTCCCATTCCACCTACATCCTCGTCTAGCCTCCTCCCATCTGCTCAGCTGCCTAGCTCCCATAATCCTCCACCAGTTAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp GCTCAGAGGATTGTTGTTCTTGAACATGTACAGGTTGAAGGGGGCTaGCTCCTTGCCCACGTTCCTCCACATGGTGTAGTCGGGGGACGT +
Preference number: 5 (lower is better)
Translates to: AQRIVVLEHVQVEGG*LLAHVPPHGVVGGR
Trigger: ACGTCCCCCGACTACACCATGTGGAGGAACGTGGGCAAGGAGCCAGCCCCCTTCAACCTGTACATGTTCAAGAACAACAATCCTCTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp GTGGTGGTAGCAAACCAGTGGCCTGCTTTCTCTCGGATGCTGGCATaGAGCTTTTTAGTGATGACCTGTCCTTCCAGAGCCAGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: VVVANQWPAFSRMLA*SFLVMTCPSRARKA
Trigger: GGCCTTCCTGGCTCTGGAAGGACAGGTCATCACTAAAAAGCTCCATGCCAGCATCCGAGAGAAAGCAGGCCACTGGTTTGCTACCACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTAGGGAATTCCCGTTGTaGTCAATCAACTCGGTGACG +
Preference number: 5 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRREFPL*SINSVT
Trigger: CGTCACCGAGTTGATTGACAACAACGGGAATTCCCT...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGGCTTTGAGGCCTCCATaGGTGCCCACGGTAAGGGTG +
Preference number: 5 (lower is better)
Translates to: ICGRALVYFRMRDFALRQALRPP*VPTVRV
Trigger: CACCCTTACCGTGGGCACCAATGGAGGCCTCAAAGC...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTCCTTAGGAGAGGAGGTCACCACGTCATAATCACGTaGAGTAAAGTGGACGAGCTT +
Preference number: 5 (lower is better)
Translates to: QPGLSAPLGLRLLRRGGHHVIIT*SKVDEL
Trigger: AAGCTCGTCCACTTTACTCAACGTGATTATGACGTG...GTGACCTCCTCTCCTAAGGAGACGAAGACCTAACGGGGCACTGAGGCCGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCAAAGGGGGCTGGCTCCTaGCCCACGTTCCTCCACATG +
Preference number: 5 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSKGAGS*PTFLHM
Trigger: CATGTGGAGGAACGTGGGCAAGGAGCCAGCCCCCTT...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 90 bp AGCCACACTGTGCGCTCCTGGCTCATGAAAGGGGCTCGCTCAAAGTaGAGAGTCAAGGCAGAACCCCCATTGGCAATCAGATCAAACGTG +
Preference number: 5 (lower is better)
Translates to: SHTVRSWLMKGARSK*RVKAEPPLAIRSNV
Trigger: CACGTTTGATCTGATTGCCAATGGGGGTTCTGCCTTGACTCTTCACTTTGAGCGAGCCCCTTTCATGAGCCAGGAGCGCACAGTGTGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp CTTCCTGTGTCACCCGCCGACCAACTTCTGCTTCGCCACTGTCTATaGTGCTGTTTTTCAATGACCAGGGCACTTTGCCTCCAGATGGCA +
Preference number: 5 (lower is better)
Translates to: LPVSPADQLLLRHCL*CCFSMTRALCLQMA
Trigger: TGCCATCTGGAGGCAAAGTGCCCTGGTCATTGAAAAACAGCAGCATAGACAGTGGCGAAGCAGAAGTTGGTCGGCGGGTGACACAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp CACACTGCCAGCTGTTCTGACCCAGTGTGCATCTCCCGTTACCGTTaGACAAATCAGGGCAGCCATCAATGGTGCAGTGTTCACCATTCC +
Preference number: 5 (lower is better)
Translates to: HTASCSDPVCISRYR*TNQGSHQWCSVHHS
Trigger: GGAATGGTGAACACTGCACCATTGATGGCTGCCCTGATTTGTGCAACGGTAACGGGAGATGCACACTGGGTCAGAACAGCTGGCAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp ACTTGTCAAGATAGGAATAGCTCCAGACTTTCCCGTCGGCGAACATaGGGGACACGATCCGGCCTTGCTTGTCAATGTCTGTCCTCTCGC +
Preference number: 5 (lower is better)
Translates to: TCQDRNSSRLSRRRT*GTRSGLACQCLSSR
Trigger: GCGAGAGGACAGACATTGACAAGCAAGGCCGGATCGTGTCCCGCATGTTCGCCGACGGGAAAGTCTGGAGCTATTCCTATCTTGACAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp TCCCCTGTCCCTTTGTGTAGTATTCCGCTTTTCACATTGAGGGTGTaGTGTTTGTCCAGGGACCAGCCTCCAAGGTTGGAAGGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: SPVPLCSIPLFTLRV*CLSRDQPPRLEGSS
Trigger: GCTGGACCCTTCCAACCTTGGAGGCTGGTCCCTGGACAAACACCACACCCTCAATGTGAAAAGCGGAATACTACACAAAGGGACAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTCTGAGCAGGTATGAATaGGGGGAGAATTCCTCATCA +
Preference number: 5 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRLSRYE*GENSSS
Trigger: TGATGAGGAATTCTCCCCCAATTCATACCTGCTCAG...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCAGCTGGGGCGTGGATTaGACTCCGCCGATTGGTCAG +
Preference number: 5 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCSWGVD*TPPIGQ
Trigger: CTGACCAATCGGCGGAGTCAAATCCACGCCCCAGCT...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGGTTTCCATGGCAACGTaGCATCCAGGCCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: ICGRALVYFRMRDFALRQVSMAT*HPGPLQ
Trigger: CTGGAGAGGGCCTGGATGCAACGTTGCCATGGAAAC...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTATTCCGCTTTTCACATaGAGGGTGTGGTGTTTGTCC +
Preference number: 5 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRIPLFT*RVWCLS
Trigger: GGACAAACACCACACCCTCAATGTGAAAAGCGGAAT...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGAGTTGTCCATGGGGTaGACGGCGAGGTCTGTCGGC +
Preference number: 5 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLELSMG*TARSVG
Trigger: GCCGACAGACCTCGCCGTCAACCCCATGGACAACTC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCCCACTCTCCAGCACCTaGCGCCCAATGGTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCPLSST*RPMVVP
Trigger: AGGAACCACCATTGGGCGCAAGGTGCTGGAGAGTGG...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAGGCTCTCTGTCTCGCTaGGTCCAGGACGCGGGCCTT +
Preference number: 5 (lower is better)
Translates to: SVPFLLAILRLFSALDPEGSLSR*VQDAGL
Trigger: AAGGCCCGCGTCCTGGACCAAGCGAGACAGAGAGCC...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGCTTTCTGCTGCTCCTaGGCCCAGGCAGTACCCAGG +
Preference number: 5 (lower is better)
Translates to: PFLLAILRLFSALDPEQVAFCCS*AQAVPR
Trigger: CCTGGGTACTGCCTGGGCCAAGGAGCAGCAGAAAGC...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 90 bp CAACTTCCGAATTTCCAGCCAGGTCTTTGGCTCCGCTCAGAGACTTaGCTCGGTAGATTCGGCGACTGTTGGTGTCAGAGACGTAGAGTG +
Preference number: 5 (lower is better)
Translates to: QLPNFQPGLWLRSET*LGRFGDCWCQRRRV
Trigger: CACTCTACGTCTCTGACACCAACAGTCGCCGAATCTACCGAGTCAAGTCTCTGAGCGGAGCCAAAGACCTGGCTGGAAATTCGGAAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 90 bp AGTGATGTAGAGCACCCCAGTGTGAGAAATAGCAATGGCGCTGGCTaGTTCCAGCGCAGAATGGATGGCGAGTTTGCTGAGCGAGTAGTC +
Preference number: 5 (lower is better)
Translates to: SDVEHPSVRNSNGAG*FQRRMDGEFAERVV
Trigger: GACTACTCGCTCAGCAAACTCGCCATCCATTCTGCGCTGGAATCAGCCAGCGCCATTGCTATTTCTCACACTGGGGTGCTCTACATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp GATGCCTTTGCCGATGATGGGTGTGGTGGTAGCAAACCAGTGGCCTaGTTTCTCTCGGATGCTGGCATGGAGCTTTTTAGTGATGACCTG +
Preference number: 5 (lower is better)
Translates to: DAFADDGCGGSKPVA*FLSDAGMELFSDDL
Trigger: CAGGTCATCACTAAAAAGCTCCATGCCAGCATCCGAGAGAAAGCAGGCCACTGGTTTGCTACCACCACACCCATCATCGGCAAAGGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp TGTGCTTCCAGACGACGTCTTGAAAAGGAAGTGCCGAGTCTCCAGTaGGACGTTACTGTTCAGCACCCAGCTATCCTGGAGCTGAACAGA +
Preference number: 5 (lower is better)
Translates to: CASRRRLEKEVPSLQ*DVTVQHPAILELNR
Trigger: TCTGTTCAGCTCCAGGATAGCTGGGTGCTGAACAGTAACGTCCCACTGGAGACTCGGCACTTCCTTTTCAAGACGTCGTCTGGAAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGACTGGCTGTGGTGGTTaGGAGGGCCACTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: ATDTHKLRILNRLHPVTATGCGG*EGHCWR
Trigger: CCTCCAGCAGTGGCCCTCCAAACCACCACAGCCAGT...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGAGGGGGCCTCAGTGTaGACTGGCTGTGGTGGTTTG +
Preference number: 5 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLEGASV*TGCGGL
Trigger: CAAACCACCACAGCCAGTCAACACTGAGGCCCCCTC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGTCAGTGAGTTCCTGTaGAGGGAGTTGGCCGAGGAG +
Preference number: 5 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCVSEFL*RELAEE
Trigger: CTCCTCGGCCAACTCCCTCAACAGGAACTCACTGAC...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCAGACCAGCCTCCAAGGTaGGAAGGGTCCAGCTCGAAT +
Preference number: 5 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSDQPPR*EGSSSN
Trigger: ATTCGAGCTGGACCCTTCCAACCTTGGAGGCTGGTC...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGACCAGCCTCCAAGGTaGGAAGGGTCCAGCTCGAAT +
Preference number: 5 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCDQPPR*EGSSSN
Trigger: ATTCGAGCTGGACCCTTCCAACCTTGGAGGCTGGTC...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTCCTCAGCTGGTCTGGTGATGCCGGCCCTTGTGAATGTCTTTGTGTTGCTCACCAGTTGACATCGTTTTaGCAGTCACAGTCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: VLSWSGDAGPCECLCVAHQLTSF*QSQSEA
Trigger: GGCCTCAGACTGTGACTGCAAAAACGATGTCAACTG...GTGAGCAACACAAAGACATTCACAAGGGCCGGCATCACCAGACCAGCTGAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTTTTAGGGAATTCCCGTaGTTGTCAATCAACTCGGTG +
Preference number: 5 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRFREFP*LSINSV
Trigger: CACCGAGTTGATTGACAACAACGGGAATTCCCTAAA...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGGGACACGATCCGGCCTaGCTTGTCAATGTCTGTCCT +
Preference number: 5 (lower is better)
Translates to: ICGRALVYFRMRDFALRQGHDPA*LVNVCP
Trigger: AGGACAGACATTGACAAGCAAGGCCGGATCGTGTCC...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTGTGTACTGCAGTTGCTaGATCATGAGGCCATTGATA +
Preference number: 5 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRVYCSC*IMRPLI
Trigger: TATCAATGGCCTCATGATCAAGCAACTGCAGTACAC...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGCTTTCTGCTGCTCCTaGGCCCAGGCAGTACCCAGG +
Preference number: 5 (lower is better)
Translates to: VPFLLAILRLFSALDPEQAFCCS*AQAVPR
Trigger: CCTGGGTACTGCCTGGGCCAAGGAGCAGCAGAAAGC...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 90 bp GCAGGTATGAATTGGGGGAGAATTCCTCATCAGGGTTGGTGTCCATaGTCTGATGGGAGGTGTTGCTGTCTAGCAATGGCATCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: AGMNWGRIPHQGWCP*SDGRCCCLAMASGS
Trigger: GCTGCCAGATGCCATTGCTAGACAGCAACACCTCCCATCAGATCATGGACACCAACCCTGATGAGGAATTCTCCCCCAATTCATACCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp ACAGTAACCACTTCGGTGTGGGGAGGGCTCGCAGATTCCCAATTCTaGCAGGGTGAAGTTTGTCCCTTGTCTAGAAAACTCATCCGACTC +
Preference number: 5 (lower is better)
Translates to: TVTTSVWGGLADSQF*QGEVCPLSRKLIRL
Trigger: GAGTCGGATGAGTTTTCTAGACAAGGGACAAACTTCACCCTGGCAGAATTGGGAATCTGCGAGCCCTCCCCACACCGAAGTGGTTACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp TTGGAGTTCTCAATGTCAATGGTGATAGATTTCTCCATTTCCCGGTaGAGACTGGTCACTACGCCCGTGGGGCGGGTCACATTGGTCAGA +
Preference number: 5 (lower is better)
Translates to: LEFSMSMVIDFSISR*RLVTTPVGRVTLVR
Trigger: TCTGACCAATGTGACCCGCCCCACGGGCGTAGTGACCAGTCTGCACCGGGAAATGGAGAAATCTATCACCATTGACATTGAGAACTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGTCAGTGAGTTCCTGTaGAGGGAGTTGGCCGAGGAG +
Preference number: 5 (lower is better)
Translates to: PFLLAILRLFSALDPEQVVSEFL*RELAEE
Trigger: CTCCTCGGCCAACTCCCTCAACAGGAACTCACTGAC...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGGGCTGGAGTTGCCAATaGAGTCCGAGCAGATGCATT +
Preference number: 5 (lower is better)
Translates to: ICGRALVYFRMRDFALRQGWSCQ*SPSRCI
Trigger: AATGCATCTGCTCGGACTCAATTGGCAACTCCAGCC...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGTTTCCATGGCAACGTaGCATCCAGGCCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLVSMAT*HPGPLQ
Trigger: CTGGAGAGGGCCTGGATGCAACGTTGCCATGGAAAC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGTTGAGGGTGTGGTGTTaGTCCAGGGACCAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: PFLLAILRLFSALDPEQVLRVWC*SRDQPP
Trigger: TGGAGGCTGGTCCCTGGACAAACACCACACCCTCAA...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCTTTCCAGCCAGGTCTTaGGCTCCGCTCAGAGACTTG +
Preference number: 5 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCFPARS*APLRDL
Trigger: CAAGTCTCTGAGCGGAGCCAAAGACCTGGCTGGAAA...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTTACATAAGCCCATTCTaGTCTACTGCAATACCTCTG +
Preference number: 5 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRYISPF*STAIPL
Trigger: CAGAGGTATTGCAGTAGACAAGAATGGGCTTATGTA...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAATGGGCAGAGAGATGTaGCAGCGCCCAATGGTGGGG +
Preference number: 5 (lower is better)
Translates to: SVPFLLAILRLFSALDPEMGREM*QRPMVG
Trigger: CCCCACCATTGGGCGCTGCAACATCTCTCTGCCCAT...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGTCGCTAATGACGGGTTaGATGCTGGCAATGCGGAAG +
Preference number: 5 (lower is better)
Translates to: ICGRALVYFRMRDFALRQSLMTG*MLAMRK
Trigger: CTTCCGCATTGCCAGCATCAAACCCGTCATTAGCGA...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTACCCATACTGTCATATaGCACAGTCATCCAGTACAT +
Preference number: 5 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRTHTVI*HSHPVH
Trigger: ATGTACTGGATGACTGTGCAATATGACAGTATGGGT...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTGCCACTTGGGATCCTAAAGCAGCCCGGCCTCAGTGCCCCGTTAGGTCTTCGTTTGCTCAGAGGATTGTaGTTCTTGAACATGTACAGG +
Preference number: 5 (lower is better)
Translates to: LPLGILKQPGLSAPLGLRLLRGL*FLNMYR
Trigger: CCTGTACATGTTCAAGAACAACAATCCTCTGAGCAA...ACGAAGACCTAACGGGGCACTGAGGCCGGGCTGCTTTAGGATCCCAAGTGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAACCACTCTCCAGCACCTaGCGCCCAATGGTGGTTCCT +
Preference number: 5 (lower is better)
Translates to: VPFLLAILRLFSALDPEQPLSST*RPMVVP
Trigger: AGGAACCACCATTGGGCGCAAGGTGCTGGAGAGTGG...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAGGCTCTCTGTCTCGCTaGGTCCAGGACGCGGGCCTT +
Preference number: 5 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPGSLSR*VQDAGL
Trigger: AAGGCCCGCGTCCTGGACCAAGCGAGACAGAGAGCC...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS TCA 90 bp TGGAATGACTTCTGGAAGAGATGCCCCTCTACAGCAACCATCAAGTaGACCCTGATGAGGTTCAAGGGCACTGTGGACTGTGTCATGGTG +
Preference number: 5 (lower is better)
Translates to: WNDFWKRCPSTATIK*TLMRFKGTVDCVMV
Trigger: CACCATGACACAGTCCACAGTGCCCTTGAACCTCATCAGGGTTCACTTGATGGTTGCTGTAGAGGGGCATCTCTTCCAGAAGTCATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 90 bp CCCCAGTCACCAGACTCACAGTGTACTGATGGATACCATCAGCGTTaGACACGTACAATTCCTGTTCTCCCGGAGATGCAGCCTCATACT +
Preference number: 5 (lower is better)
Translates to: PQSPDSQCTDGYHQR*TRTIPVLPEMQPHT
Trigger: AGTATGAGGCTGCATCTCCGGGAGAACAGGAATTGTACGTGTTCAACGCTGATGGTATCCATCAGTACACTGTGAGTCTGGTGACTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp TTTTTAGTGATGACCTGTCCTTCCAGAGCCAGGAAGGCCTGGTTATaGCTCTCAGTTGTCTGCTGGACACCTGTAATGAGCTGTCCGTTC +
Preference number: 5 (lower is better)
Translates to: FLVMTCPSRARKAWL*LSVVCWTPVMSCPF
Trigger: GAACGGACAGCTCATTACAGGTGTCCAGCAGACAACTGAGAGGCATAACCAGGCCTTCCTGGCTCTGGAAGGACAGGTCATCACTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp GCTAGGCAGCTGAGCAGATGGGAGGAGGCTAGACGAGGATGTAGGTaGAATGGGACGACCATTGTCGTCATCCGATTTATTTTCATTGTC +
Preference number: 5 (lower is better)
Translates to: ARQLSRWEEARRGCR*NGTTIVVIRFIFIV
Trigger: GACAATGAAAATAAATCGGATGACGACAATGGTCGTCCCATTCCACCTACATCCTCGTCTAGCCTCCTCCCATCTGCTCAGCTGCCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp TGGAGCTTTTTAGTGATGACCTGTCCTTCCAGAGCCAGGAAGGCCTaGTTATGCCTCTCAGTTGTCTGCTGGACACCTGTAATGAGCTGT +
Preference number: 5 (lower is better)
Translates to: WSFLVMTCPSRARKA*LCLSVVCWTPVMSC
Trigger: ACAGCTCATTACAGGTGTCCAGCAGACAACTGAGAGGCATAACCAGGCCTTCCTGGCTCTGGAAGGACAGGTCATCACTAAAAAGCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp AACATGATGCCTTTGCCGATGATGGGTGTGGTGGTAGCAAACCAGTaGCCTGCTTTCTCTCGGATGCTGGCATGGAGCTTTTTAGTGATG +
Preference number: 5 (lower is better)
Translates to: NMMPLPMMGVVVANQ*PAFSRMLAWSFLVM
Trigger: CATCACTAAAAAGCTCCATGCCAGCATCCGAGAGAAAGCAGGCCACTGGTTTGCTACCACCACACCCATCATCGGCAAAGGCATCATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGTTCCTGTTGAGGGAGTaGGCCGAGGAGTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: FLFFLRICGRALVYFRMRFLLRE*AEEWWW
Trigger: CCACCACCACTCCTCGGCCAACTCCCTCAACAGGAA...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGGCTGGAGTTGCCAATaGAGTCCGAGCAGATGCATT +
Preference number: 5 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCGWSCQ*SPSRCI
Trigger: AATGCATCTGCTCGGACTCAATTGGCAACTCCAGCC...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGATCTGCCGGCTGGAGTaGCCAATTGAGTCCGAGCAG +
Preference number: 5 (lower is better)
Translates to: ATDTHKLRILNRLHPVTAICRLE*PIESEQ
Trigger: CTGCTCGGACTCAATTGGCAACTCCAGCCGGCAGAT...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCACTCCAGATGGCACTGTaGCCACATCATCGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSLQMAL*PHHRFL
Trigger: CAGGAAACGATGATGTGGCAACAGTGCCATCTGGAG...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACCGAAGAGGGCATCCTaGCCCAGGGAGATGTTGAAC +
Preference number: 5 (lower is better)
Translates to: SVPFLLAILRLFSALDPEPKRAS*PREMLN
Trigger: GTTCAACATCTCCCTGGGCAAGGATGCCCTCTTCGG...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTATGTGGGTGCTGTCCTaGCCTGCCAAGAGCTTGATG +
Preference number: 5 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLMWVLS*PAKSLM
Trigger: CATCAAGCTCTTGGCAGGCAAGGACAGCACCCACAT...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTCCACGGAGGAGAGGTaGGTGATCACAGTGACGTCA +
Preference number: 5 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLSTEER*VITVTS
Trigger: TGACGTCACTGTGATCACCAACCTCTCCTCCGTGGA...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTCCCCCACTTTGGAGATaGACCATCTTCAGGACACCG +
Preference number: 5 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLPPLWR*TIFRTP
Trigger: CGGTGTCCTGAAGATGGTCAATCTCCAAAGTGGGGG...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGTCATATTGCACTTCCTaGATGCGCCCATGGGTGTCA +
Preference number: 5 (lower is better)
Translates to: ICGRALVYFRMRDFALRQSYCTS*MRPWVS
Trigger: TGACACCCATGGGCGCATCAAGGAAGTGCAATATGA...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGCCTTGTTGTATGCTCTaGTCAGAAGGCCCTTGGAGT +
Preference number: 5 (lower is better)
Translates to: ICGRALVYFRMRDFALRQPCCML*SEGPWS
Trigger: ACTCCAAGGGCCTTCTGACAAGAGCATACAACAAGG...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGGGCTGTGTACTGCAGTaGCTTGATCATGAGGCCATT +
Preference number: 5 (lower is better)
Translates to: ICGRALVYFRMRDFALRQGCVLQ*LDHEAI
Trigger: AATGGCCTCATGATCAAGCAACTGCAGTACACAGCC...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp GTCCTTACGCCATTGTTAAAGGTGTGTCCATCTGCCGGCTGGAGTTaGCAATTGAGTCCGAGCAGATGCATTGCTATGAAATATGCCAGC +
Preference number: 5 (lower is better)
Translates to: VLTPLLKVCPSAGWS*QLSPSRCIAMKYAS
Trigger: GCTGGCATATTTCATAGCAATGCATCTGCTCGGACTCAATTGGCAACTCCAGCCGGCAGATGGACACACCTTTAACAATGGCGTAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp CAGATCAAACGTGCCATCCTGGCGAGTGATGGTGTAGCCATATTTTaGGTACTTGACAAAAGACACATTCACACCCACCAAGGGAGTCCC +
Preference number: 5 (lower is better)
Translates to: QIKRAILASDGVAIF*VLDKRHIHTHQGSP
Trigger: GGGACTCCCTTGGTGGGTGTGAATGTGTCTTTTGTCAAGTACCCAAAATATGGCTACACCATCACTCGCCAGGATGGCACGTTTGATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCATTCCTGTTGAGGGAGTaGGCCGAGGAGTGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPFLLRE*AEEWWW
Trigger: CCACCACCACTCCTCGGCCAACTCCCTCAACAGGAA...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGATCTGCCGGCTGGAGTaGCCAATTGAGTCCGAGCAG +
Preference number: 5 (lower is better)
Translates to: FLFFLRICGRALVYFRMRICRLE*PIESEQ
Trigger: CTGCTCGGACTCAATTGGCAACTCCAGCCGGCAGAT...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGCATCTCCCGTTACCGTaGCACAAATCAGGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: ATDTHKLRILNRLHPVTAHLPLP*HKSGQP
Trigger: TGGCTGCCCTGATTTGTGCAACGGTAACGGGAGATG...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGTCTCCCTCATTATCCTaGTTATCAGCGCAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: ICGRALVYFRMRDFALRQSPSLS*LSAQEV
Trigger: AACCTCCTGCGCTGATAACAAGGATAATGAGGGAGA...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTCCAGTCTGTCTGACCTaGCTGAATGATGTCCAAGGG +
Preference number: 5 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLPVCLT*LNDVQG
Trigger: CCCTTGGACATCATTCAGCAAGGTCAGACAGACTGG...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCAAAGGCAGAACCCCCATaGGCAATCAGATCAAACGTG +
Preference number: 5 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSKAEPP*AIRSNV
Trigger: CACGTTTGATCTGATTGCCAATGGGGGTTCTGCCTT...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCAATCTTCAGCAGCGACTaGTACCCTGCAGTTCTAGAG +
Preference number: 5 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSIFSSD*YPAVLE
Trigger: CTCTAGAACTGCAGGGTACAAGTCGCTGCTGAAGAT...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTACAGGGGCTAACAGTTaGTTGCCTTCAGCAAGGCCA +
Preference number: 5 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLTGANS*LPSARP
Trigger: TGGCCTTGCTGAAGGCAACAAACTGTTAGCCCCTGT...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCAGGAGATGATTCCGTTTaGGTCCACCTTCCGGATCAT +
Preference number: 5 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSGDDSV*VHLPDH
Trigger: ATGATCCGGAAGGTGGACCAAAACGGAATCATCTCC...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAACTTGGCGTAGGCGGTaGATCTTCTTCTCGTCCGTC +
Preference number: 5 (lower is better)
Translates to: SVPFLLAILRLFSALDPETWRRR*IFFSSV
Trigger: GACGGACGAGAAGAAGATCAACCGCCTACGCCAAGT...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGAGGCAGATCTCTCCATaGGTGGTGACTTGGCGTAGG +
Preference number: 5 (lower is better)
Translates to: ATDTHKLRILNRLHPVTARQISP*VVTWRR
Trigger: CCTACGCCAAGTCACCACCAATGGAGAGATCTGCCT...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAAGGCAGATCTCTCCATaGGTGGTGACTTGGCGTAGG +
Preference number: 5 (lower is better)
Translates to: VPFLLAILRLFSALDPEQRQISP*VVTWRR
Trigger: CCTACGCCAAGTCACCACCAATGGAGAGATCTGCCT...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTGCTTTGAGGCCTCCATaGGTGCCCACGGTAAGGGTG +
Preference number: 5 (lower is better)
Translates to: SALDPEQVGHILGELETFALRPP*VPTVRV
Trigger: CACCCTTACCGTGGGCACCAATGGAGGCCTCAAAGC...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTATGGGCAGAGAGATGTaGCAGCGCCCAATGGTGGGG +
Preference number: 5 (lower is better)
Translates to: SALDPEQVGHILGELETFMGREM*QRPMVG
Trigger: CCCCACCATTGGGCGCTGCAACATCTCTCTGCCCAT...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGACGATCCGGCCTTGCTaGTCAATGTCTGTCCTCTCG +
Preference number: 5 (lower is better)
Translates to: ATDTHKLRILNRLHPVTATIRPC*SMSVLS
Trigger: CGAGAGGACAGACATTGACAAGCAAGGCCGGATCGT...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAACCCCCACTTTGGAGATaGACCATCTTCAGGACACCG +
Preference number: 5 (lower is better)
Translates to: VPFLLAILRLFSALDPEQPPLWR*TIFRTP
Trigger: CGGTGTCCTGAAGATGGTCAATCTCCAAAGTGGGGG...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGCCGGAACATCTCATATaGCACTTCCTTGATGCGCCC +
Preference number: 5 (lower is better)
Translates to: PFLLAILRLFSALDPEQVPEHLI*HFLDAP
Trigger: GGGCGCATCAAGGAAGTGCAATATGAGATGTTCCGG...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCACCTTGTTGTATGCTCTaGTCAGAAGGCCCTTGGAGT +
Preference number: 5 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSPCCML*SEGPWS
Trigger: ACTCCAAGGGCCTTCTGACAAGAGCATACAACAAGG...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp ATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCGCTTAGACAGGGCACAAAATACATTTaGGCTCTCGGGAATCCAGGA +
Preference number: 5 (lower is better)
Translates to: ICGRALVYFRMRDFALRQGTKYI*ALGNPG
Trigger: TCCTGGATTCCCGAGAGCCAAAATGTATTTTGTGCC...CTGTCTAAGCGCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGCAAACATGATGCCTTaGCCGATGATGGGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: PFLLAILRLFSALDPEQVANMMP*PMMGVV
Trigger: CACCACACCCATCATCGGCAAAGGCATCATGTTTGC...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 90 bp TATGAATTGGGGGAGAATTCCTCATCAGGGTTGGTGTCCATGATCTaGTGGGAGGTGTTGCTGTCTAGCAATGGCATCTGGCAGCTAACT +
Preference number: 5 (lower is better)
Translates to: YELGENSSSGLVSMI*WEVLLSSNGIWQLT
Trigger: AGTTAGCTGCCAGATGCCATTGCTAGACAGCAACACCTCCCATCAGATCATGGACACCAACCCTGATGAGGAATTCTCCCCCAATTCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp GTACAATTCCTGTTCTCCCGGAGATGCAGCCTCATACTGGTTGAATaGGTTAAGAACGGGTTTATTTTTGCTGACCGCCCTGATCCGGAT +
Preference number: 5 (lower is better)
Translates to: VQFLFSRRCSLILVE*VKNGFIFADRPDPD
Trigger: ATCCGGATCAGGGCGGTCAGCAAAAATAAACCCGTTCTTAACGCATTCAACCAGTATGAGGCTGCATCTCCGGGAGAACAGGAATTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp AAGCCGGTCCTTACGCCATTGTTAAAGGTGTGTCCATCTGCCGGCTaGAGTTGCCAATTGAGTCCGAGCAGATGCATTGCTATGAAATAT +
Preference number: 5 (lower is better)
Translates to: KPVLTPLLKVCPSAG*SCQLSPSRCIAMKY
Trigger: ATATTTCATAGCAATGCATCTGCTCGGACTCAATTGGCAACTCCAGCCGGCAGATGGACACACCTTTAACAATGGCGTAAGGACCGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGTCTCGGCATTCACATTaGCCATCTTTACAGGTCCCG +
Preference number: 5 (lower is better)
Translates to: PFLLAILRLFSALDPEQVSRHSH*PSLQVP
Trigger: CGGGACCTGTAAAGATGGCAAATGTGAATGCCGAGA...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGGGGCTAACAGTTTGTaGCCTTCAGCAAGGCCATTA +
Preference number: 5 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLGANSL*PSARPL
Trigger: TAATGGCCTTGCTGAAGGCAACAAACTGTTAGCCCC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAACAGGGGCTAACAGTTaGTTGCCTTCAGCAAGGCCA +
Preference number: 5 (lower is better)
Translates to: VPFLLAILRLFSALDPEQTGANS*LPSARP
Trigger: TGGCCTTGCTGAAGGCAACAAACTGTTAGCCCCTGT...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGGAGATGATTCCGTTTaGGTCCACCTTCCGGATCAT +
Preference number: 5 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLGDDSV*VHLPDH
Trigger: ATGATCCGGAAGGTGGACCAAAACGGAATCATCTCC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAATCCGCAGGATGACGTaGTTCTCCAGAACGTACAGG +
Preference number: 5 (lower is better)
Translates to: SVPFLLAILRLFSALDPEIRRMT*FSRTYR
Trigger: CCTGTACGTTCTGGAGAACAACGTCATCCTGCGGAT...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGAGAACGGGTTTATTTTaGCTGACCGCCCTGATCCGG +
Preference number: 5 (lower is better)
Translates to: ATDTHKLRILNRLHPVTARTGLF*LTALIR
Trigger: CCGGATCAGGGCGGTCAGCAAAAATAAACCCGTTCT...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAAGAACGGGTTTATTTTaGCTGACCGCCCTGATCCGG +
Preference number: 5 (lower is better)
Translates to: SVPFLLAILRLFSALDPERTGLF*LTALIR
Trigger: CCGGATCAGGGCGGTCAGCAAAAATAAACCCGTTCT...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGCAGCCTCATACTGGTaGAATGCGTTAAGAACGGGT +
Preference number: 5 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLAASYW*NALRTG
Trigger: ACCCGTTCTTAACGCATTCAACCAGTATGAGGCTGC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGACGATCCGGCCTTGCTaGTCAATGTCTGTCCTCTCG +
Preference number: 5 (lower is better)
Translates to: FLFFLRICGRALVYFRMRTIRPC*SMSVLS
Trigger: CGAGAGGACAGACATTGACAAGCAAGGCCGGATCGT...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAATGGGTGTCAAAGTGCTaGCTAAGCGTCATGACGGCA +
Preference number: 5 (lower is better)
Translates to: SVPFLLAILRLFSALDPEWVSKC*LSVMTA
Trigger: TGCCGTCATGACGCTTAGCAAGCACTTTGACACCCA...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCAGTTTCAGTTCCCTCTaGATGACCCTACCCATACTG +
Preference number: 5 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCSFSSL*MTLPIL
Trigger: CAGTATGGGTAGGGTCATCAAGAGGGAACTGAAACT...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAGCAAACATGATGCCTTaGCCGATGATGGGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: SVPFLLAILRLFSALDPEANMMP*PMMGVV
Trigger: CACCACACCCATCATCGGCAAAGGCATCATGTTTGC...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTCTTAAGAACTGGATGTaGCTGCTACTGTCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLLKNWM*LLLSAS
Trigger: GCTGGCAGACAGTAGCAGCAACATCCAGTTCTTAAG...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 90 bp ATAGGCCATAAACCCTTTGGCCATAAGCATCTGTCTTGTCCCAGATaGATGTGTAGGCTAGGTTGGGAGAAGCCTGGAATGACTTCTGGA +
Preference number: 5 (lower is better)
Translates to: IGHKPFGHKHLSCPR*MCRLGWEKPGMTSG
Trigger: TCCAGAAGTCATTCCAGGCTTCTCCCAACCTAGCCTACACATTCATCTGGGACAAGACAGATGCTTATGGCCAAAGGGTTTATGGCCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 90 bp TTGAACACGTACAATTCCTGTTCTCCCGGAGATGCAGCCTCATACTaGTTGAATGCGTTAAGAACGGGTTTATTTTTGCTGACCGCCCTG +
Preference number: 5 (lower is better)
Translates to: LNTYNSCSPGDAASY*LNALRTGLFLLTAL
Trigger: CAGGGCGGTCAGCAAAAATAAACCCGTTCTTAACGCATTCAACCAGTATGAGGCTGCATCTCCGGGAGAACAGGAATTGTACGTGTTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGCTGAGCAGGTATGAATaGGGGGAGAATTCCTCATCA +
Preference number: 5 (lower is better)
Translates to: PFLLAILRLFSALDPEQVLSRYE*GENSSS
Trigger: TGATGAGGAATTCTCCCCCAATTCATACCTGCTCAG...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCATTCCAACTGCAGTATTaGGAGGGTTTCTTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSFQLQY*EGFFSL
Trigger: CAAGCTGAAGAAACCCTCCAAATACTGCAGTTGGAA...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGAATGACCAGGGCACTTaGCCTCCAGATGGCACTGTT +
Preference number: 5 (lower is better)
Translates to: FLFFLRICGRALVYFRMRNDQGT*PPDGTV
Trigger: AACAGTGCCATCTGGAGGCAAAGTGCCCTGGTCATT...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGGAAGGATCGATACATaGGTTCATAGGCACATCGCA +
Preference number: 5 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLGRIDT*VHRHIA
Trigger: TGCGATGTGCCTATGAACCAATGTATCGATCCTTCC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAAAGGCAGAACCCCCATaGGCAATCAGATCAAACGTG +
Preference number: 5 (lower is better)
Translates to: SVPFLLAILRLFSALDPEKAEPP*AIRSNV
Trigger: CACGTTTGATCTGATTGCCAATGGGGGTTCTGCCTT...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGATTCCGCTTTTCACATaGAGGGTGTGGTGTTTGTCC +
Preference number: 5 (lower is better)
Translates to: PFLLAILRLFSALDPEQVIPLFT*RVWCLS
Trigger: GGACAAACACCACACCCTCAATGTGAAAAGCGGAAT...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCATTTCCAGCCAGGTCTTaGGCTCCGCTCAGAGACTTG +
Preference number: 5 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPFPARS*APLRDL
Trigger: CAAGTCTCTGAGCGGAGCCAAAGACCTGGCTGGAAA...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAGTTGACATCGTTTTaGCAGTCACAGTCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: SVPFLLAILRLFSALDPEQLTSF*QSQSEA
Trigger: GGCCTCAGACTGTGACTGCAAAAACGATGTCAACTG...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTACGTCATCATCCCGGTaGGAGTTCTCAATGTCAATG +
Preference number: 5 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLTSSSR*EFSMSM
Trigger: CATTGACATTGAGAACTCCAACCGGGATGATGACGT...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAAGGAGAAACCCCCACTTaGGAGATTGACCATCTTCAG +
Preference number: 5 (lower is better)
Translates to: SVPFLLAILRLFSALDPEGETPT*EIDHLQ
Trigger: CTGAAGATGGTCAATCTCCAAAGTGGGGGTTTCTCC...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGTGGGTGTCAAAGTGCTaGCTAAGCGTCATGACGGCA +
Preference number: 5 (lower is better)
Translates to: FLFFLRICGRALVYFRMRWVSKC*LSVMTA
Trigger: TGCCGTCATGACGCTTAGCAAGCACTTTGACACCCA...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCCACGTCATAATCACGTaGAGTAAAGTGGACGAGCTT +
Preference number: 5 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCHVIIT*SKVDEL
Trigger: AAGCTCGTCCACTTTACTCAACGTGATTATGACGTG...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTGGCACAAAATACATTTaGGCTCTCGGGAATCCAGGA +
Preference number: 5 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLGTKYI*ALGNPG
Trigger: TCCTGGATTCCCGAGAGCCAAAATGTATTTTGTGCC...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGCTGTCCGTTCTCGCTaGCTTGACTCTCTGACAGTT +
Preference number: 5 (lower is better)
Translates to: FLFFLRICGRALVYFRMRAVRSR*LDSLTV
Trigger: AACTGTCAGAGAGTCAAGCAAGCGAGAACGGACAGC...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGTCACCCGCCCTTCTTaGATGGCAAACATGATGCCT +
Preference number: 5 (lower is better)
Translates to: FLFFLRICGRALVYFRMRVTRPS*MANMMP
Trigger: AGGCATCATGTTTGCCATCAAAGAAGGGCGGGTGAC...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGTACTGGAACTCAATGTaGGTGAACCTTCGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: PFLLAILRLFSALDPEQVYWNSM*VNLRVL
Trigger: CAGGACTCGAAGGTTCACCAACATTGAGTTCCAGTA...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGCTTAAGAACTGGATGTaGCTGCTACTGTCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: ATDTHKLRILNRLHPVTALKNWM*LLLSAS
Trigger: GCTGGCAGACAGTAGCAGCAACATCCAGTTCTTAAG...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS TCA 90 bp GTGAAATTGTACAAGTACTCCCCAGTCACCAGACTCACAGTGTACTaGTGGATACCATCAGCGTTGAACACGTACAATTCCTGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: VKLYKYSPVTRLTVY*WIPSALNTYNSCSP
Trigger: GGGAGAACAGGAATTGTACGTGTTCAACGCTGATGGTATCCATCAGTACACTGTGAGTCTGGTGACTGGGGAGTACTTGTACAATTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGCCGGTCCTTACGCCATaGTTAAAGGTGTGTCCATCT +
Preference number: 5 (lower is better)
Translates to: FLFFLRICGRALVYFRMRPVLTP*LKVCPS
Trigger: AGATGGACACACCTTTAACAATGGCGTAAGGACCGG...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGTCTAAGACAACAGTGTaGAAGGAGACCATCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PFLLAILRLFSALDPEQVSKTTV*KETISL
Trigger: CAAGGAGATGGTCTCCTTCAACACTGTTGTCTTAGA...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGGGAAGGATCGATACATaGGTTCATAGGCACATCGCA +
Preference number: 5 (lower is better)
Translates to: ATDTHKLRILNRLHPVTAGRIDT*VHRHIA
Trigger: TGCGATGTGCCTATGAACCAATGTATCGATCCTTCC...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAATCTCCCTCATTATCCTaGTTATCAGCGCAGGAGGTT +
Preference number: 5 (lower is better)
Translates to: VPFLLAILRLFSALDPEQSPSLS*LSAQEV
Trigger: AACCTCCTGCGCTGATAACAAGGATAATGAGGGAGA...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTCCAGTCTGTCTGACCTaGCTGAATGATGTCCAAGGG +
Preference number: 5 (lower is better)
Translates to: SALDPEQVGHILGELETFPVCLT*LNDVQG
Trigger: CCCTTGGACATCATTCAGCAAGGTCAGACAGACTGG...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATTTGAGGGTGTGGTGTTaGTCCAGGGACCAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANLRVWC*SRDQPP
Trigger: TGGAGGCTGGTCCCTGGACAAACACCACACCCTCAA...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTATCCGCAGGATGACGTaGTTCTCCAGAACGTACAGG +
Preference number: 5 (lower is better)
Translates to: SALDPEQVGHILGELETFIRRMT*FSRTYR
Trigger: CCTGTACGTTCTGGAGAACAACGTCATCCTGCGGAT...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGGGTCAACCCATACTGTCATATaGCACAGTCATCCAGTACAT +
Preference number: 5 (lower is better)
Translates to: PFGYSASLFCLRPGTSGSTHTVI*HSHPVH
Trigger: ATGTACTGGATGACTGTGCAATATGACAGTATGGGT...TGACCCACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGGCTGTGTACTGCAGTaGCTTGATCATGAGGCCATT +
Preference number: 5 (lower is better)
Translates to: FLFFLRICGRALVYFRMRGCVLQ*LDHEAI
Trigger: AATGGCCTCATGATCAAGCAACTGCAGTACACAGCC...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGTTCCAACTGCAGTATTaGGAGGGTTTCTTCAGCTTG +
Preference number: 5 (lower is better)
Translates to: ATDTHKLRILNRLHPVTAFQLQY*EGFFSL
Trigger: CAAGCTGAAGAAACCCTCCAAATACTGCAGTTGGAA...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCACCGGTCCTTACGCCATaGTTAAAGGTGTGTCCATCT +
Preference number: 5 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPPVLTP*LKVCPS
Trigger: AGATGGACACACCTTTAACAATGGCGTAAGGACCGG...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTCTGCTATTGAAGGGGTaGTCTCCAGGAATGATGTGG +
Preference number: 5 (lower is better)
Translates to: SALDPEQVGHILGELETFLLLKG*SPGMMW
Trigger: CCACATCATTCCTGGAGACAACCCCTTCAATAGCAG...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAGGGGCTAACAGTTTGTaGCCTTCAGCAAGGCCATTA +
Preference number: 5 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPGANSL*PSARPL
Trigger: TAATGGCCTTGCTGAAGGCAACAAACTGTTAGCCCC...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp TTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTGCTTGTGTCCTGGGCTGTaGCTATGTTTAAACTCTTTA +
Preference number: 5 (lower is better)
Translates to: FPQNLWPGSSLLQDEGLCLCPGL*LCLNSL
Trigger: TAAAGAGTTTAAACATAGCAACAGCCCAGGACACAA...GCAAAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATACTTGGCGTAGGCGGTaGATCTTCTTCTCGTCCGTC +
Preference number: 5 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANTWRRR*IFFSSV
Trigger: GACGGACGAGAAGAAGATCAACCGCCTACGCCAAGT...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTAGGGAATTCCCGTTGTaGTCAATCAACTCGGTGACG +
Preference number: 5 (lower is better)
Translates to: SALDPEQVGHILGELETFREFPL*SINSVT
Trigger: CGTCACCGAGTTGATTGACAACAACGGGAATTCCCT...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAATTTAGGGAATTCCCGTaGTTGTCAATCAACTCGGTG +
Preference number: 5 (lower is better)
Translates to: SVPFLLAILRLFSALDPEFREFP*LSINSV
Trigger: CACCGAGTTGATTGACAACAACGGGAATTCCCTAAA...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACCAAAGATGGTGACTTaGCCTTTGATCTGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: SVPFLLAILRLFSALDPEPKMVT*PLICSF
Trigger: GAAGGAACAGATCAAAGGCAAAGTCACCATCTTTGG...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAACTTGTCAGAAGGCCCTaGGAGTTGTATTCAAAGATG +
Preference number: 5 (lower is better)
Translates to: VPFLLAILRLFSALDPEQLVRRP*ELYSKM
Trigger: CATCTTTGAATACAACTCCAAGGGCCTTCTGACAAG...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GCAACTGATACCCACAAACTACGGATTCTAAACAGACTACACCCTGTAACTGCGGTGTACTGCAGTTGCTaGATCATGAGGCCATTGATA +
Preference number: 5 (lower is better)
Translates to: ATDTHKLRILNRLHPVTAVYCSC*IMRPLI
Trigger: TATCAATGGCCTCATGATCAAGCAACTGCAGTACAC...CGCAGTTACAGGGTGTAGTCTGTTTAGAATCCGTAGTTTGTGGGTATCAGTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTTGCTCAGAGGATTGTaGTTCTTGAACATGTACAGG +
Preference number: 5 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLLLRGL*FLNMYR
Trigger: CCTGTACATGTTCAAGAACAACAATCCTCTGAGCAA...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGTTTAAGTCCAGCTCATaGCTCAGAGGATTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: PFLLAILRLFSALDPEQVFKSSS*LRGLLF
Trigger: GAACAACAATCCTCTGAGCAATGAGCTGGACTTAAA...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 90 bp AGAAAGATGTCTTTAGGATGCGGCCGTCATCACTGTAGTCAAAGATaGCTGATGCATTGCTTTCGGGTGGGTTGTAAATGTTTCGGATGT +
Preference number: 5 (lower is better)
Translates to: RKMSLGCGRHHCSQR*LMHCFRVGCKCFGC
Trigger: ACATCCGAAACATTTACAACCCACCCGAAAGCAATGCATCAGTCATCTTTGACTACAGTGATGACGGCCGCATCCTAAAGACATCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 90 bp GATACCATCAGCGTTGAACACGTACAATTCCTGTTCTCCCGGAGATaGAGCCTCATACTGGTTGAATGCGTTAAGAACGGGTTTATTTTT +
Preference number: 5 (lower is better)
Translates to: DTISVEHVQFLFSRR*SLILVECVKNGFIF
Trigger: AAAAATAAACCCGTTCTTAACGCATTCAACCAGTATGAGGCTGCATCTCCGGGAGAACAGGAATTGTACGTGTTCAACGCTGATGGTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATAATGACCAGGGCACTTaGCCTCCAGATGGCACTGTT +
Preference number: 5 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANNDQGT*PPDGTV
Trigger: AACAGTGCCATCTGGAGGCAAAGTGCCCTGGTCATT...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTTTCTCCCCTGTCCCTTaGTGTAGTATTCCGCTTTTC +
Preference number: 5 (lower is better)
Translates to: SALDPEQVGHILGELETFFSPVP*CSIPLF
Trigger: GAAAAGCGGAATACTACACAAAGGGACAGGGGAGAA...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTTTGTGTCCTGGGCTGTaGCTATGTTTAAACTCTTTA +
Preference number: 5 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLLCPGL*LCLNSL
Trigger: TAAAGAGTTTAAACATAGCAACAGCCCAGGACACAA...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAACGTCATCATCCCGGTaGGAGTTCTCAATGTCAATG +
Preference number: 5 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPTSSSR*EFSMSM
Trigger: CATTGACATTGAGAACTCCAACCGGGATGATGACGT...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTAGTTTCAGTTCCCTCTaGATGACCCTACCCATACTG +
Preference number: 5 (lower is better)
Translates to: SALDPEQVGHILGELETFSFSSL*MTLPIL
Trigger: CAGTATGGGTAGGGTCATCAAGAGGGAACTGAAACT...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAAGATTACATCCGCTGGCCTTGTaGTATGCTCTTGTCAGAAGG +
Preference number: 5 (lower is better)
Translates to: PCNCVLLSTMESPKTKRLHPLAL*YALVRR
Trigger: CCTTCTGACAAGAGCATACAACAAGGCCAGCGGATG...TAATCTTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGAGAGGATTGTTGTTCTaGAACATGTACAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: PFLLAILRLFSALDPEQVRGLLF*NMYRLK
Trigger: CTTCAACCTGTACATGTTCAAGAACAACAATCCTCT...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp TCTGTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAATTTAAGTCCAGCTCATaGCTCAGAGGATTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: SVPFLLAILRLFSALDPEFKSSS*LRGLLF
Trigger: GAACAACAATCCTCTGAGCAATGAGCTGGACTTAAA...TTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 90 bp CAATGCGGAAGCTATTGTCGTGATAGGTATAATCAAACCTGGCGTTaGTCATTCCTTCCTCAGAGAACCTGTAAATCTGCTTGTCCACAA +
Preference number: 5 (lower is better)
Translates to: QCGSYCRDRYNQTWR*SFLPQRTCKSACPQ
Trigger: TTGTGGACAAGCAGATTTACAGGTTCTCTGAGGAAGGAATGATCAACGCCAGGTTTGATTATACCTATCACGACAATAGCTTCCGCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAGTGTCCGATTTATTTTCATaGTCAGAGTCAGTCAGAGTA +
Preference number: 5 (lower is better)
Translates to: PFLLAILRLFSALDPEQVSDLFS*SESVRV
Trigger: TACTCTGACTGACTCTGACAATGAAAATAAATCGGA...CACTTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATCTGCTATTGAAGGGGTaGTCTCCAGGAATGATGTGG +
Preference number: 5 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANLLLKG*SPGMMW
Trigger: CCACATCATTCCTGGAGACAACCCCTTCAATAGCAG...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATATCTTCAGCAGCGACTaGTACCCTGCAGTTCTAGAG +
Preference number: 5 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANIFSSD*YPAVLE
Trigger: CTCTAGAACTGCAGGGTACAAGTCGCTGCTGAAGAT...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGTACATAAGCCCATTCTaGTCTACTGCAATACCTCTG +
Preference number: 5 (lower is better)
Translates to: FLFFLRICGRALVYFRMRYISPF*STAIPL
Trigger: CAGAGGTATTGCAGTAGACAAGAATGGGCTTATGTA...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATGCAGCCTCATACTGGTaGAATGCGTTAAGAACGGGT +
Preference number: 5 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANAASYW*NALRTG
Trigger: ACCCGTTCTTAACGCATTCAACCAGTATGAGGCTGC...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp TCTGCCTTAGACCCGGAACAAGTGGGTCATATTTTAGGGGAACTTGAAACATTTCCAAAGATGGTGACTTaGCCTTTGATCTGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: SALDPEQVGHILGELETFPKMVT*PLICSF
Trigger: GAAGGAACAGATCAAAGGCAAAGTCACCATCTTTGG...AAATGTTTCAAGTTCCCCTAAAATATGACCCACTTGTTCCGGGTCTAAGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp GTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGGACTTACTATCTCTGATAACTaGGAGAGTTTTCCATACTTG +
Preference number: 5 (lower is better)
Translates to: VFPQNLWPGSSLLQDEGLTISDN*ESFPYL
Trigger: CAAGTATGGAAAACTCTCCAAGTTATCAGAGATAGT...AAGTCCCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATGGAGAAACCCCCACTTaGGAGATTGACCATCTTCAG +
Preference number: 5 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANGETPT*EIDHLQ
Trigger: CTGAAGATGGTCAATCTCCAAAGTGGGGGTTTCTCC...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp TCTAAACAGACTACACCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCACTTGTCAGAAGGCCCTaGGAGTTGTATTCAAAGATG +
Preference number: 5 (lower is better)
Translates to: SKQTTPCNCVLLSTMESPLVRRP*ELYSKM
Trigger: CATCTTTGAATACAACTCCAAGGGCCTTCTGACAAG...TGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGGTGTAGTCTGTTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAACCATATTTTGGGTACTaGACAAAAGACACATTCACA +
Preference number: 5 (lower is better)
Translates to: VPFLLAILRLFSALDPEQPYFGY*TKDTFT
Trigger: TGTGAATGTGTCTTTTGTCAAGTACCCAAAATATGG...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATTTCTCCCCTGTCCCTTaGTGTAGTATTCCGCTTTTC +
Preference number: 5 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANFSPVP*CSIPLF
Trigger: GAAAAGCGGAATACTACACAAAGGGACAGGGGAGAA...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp GTTCCTTTCCTTTTGGCTATTCTGCGTCTCTTTTCTGCCTTAGACCCGGAACAAACTATCTCTGATAACTaGGAGAGTTTTCCATACTTG +
Preference number: 5 (lower is better)
Translates to: VPFLLAILRLFSALDPEQTISDN*ESFPYL
Trigger: CAAGTATGGAAAACTCTCCAAGTTATCAGAGATAGT...TTGTTCCGGGTCTAAGGCAGAAAAGAGACGCAGAATAGCCAAAAGGAAAGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATTACTGGAACTCAATGTaGGTGAACCTTCGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANYWNSM*VNLRVL
Trigger: CAGGACTCGAAGGTTCACCAACATTGAGTTCCAGTA...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp TTTTTGTTTTTCCTCAGAATTTGTGGCCGGGCTCTAGTCTACTTCAGGATGAGGTCCGATTTATTTTCATaGTCAGAGTCAGTCAGAGTA +
Preference number: 5 (lower is better)
Translates to: FLFFLRICGRALVYFRMRSDLFS*SESVRV
Trigger: TACTCTGACTGACTCTGACAATGAAAATAAATCGGA...CCTCATCCTGAAGTAGACTAGAGCCCGGCCACAAATTCTGAGGAAAAACAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS-3UTR CAA 90 bp CCCTGTAACTGCGTATTACTGTCCACAATGGAATCTCCAAAGACAAAAAGATTATCTAAGACAACAGTGTaGAAGGAGACCATCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PCNCVLLSTMESPKTKRLSKTTV*KETISL
Trigger: CAAGGAGATGGTCTCCTTCAACACTGTTGTCTTAGA...TAATCTTTTTGTCTTTGGAGATTCCATTGTGGACAGTAATACGCAGTTACAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATAGAGGATTGTTGTTCTaGAACATGTACAGGTTGAAG +
Preference number: 5 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANRGLLF*NMYRLK
Trigger: CTTCAACCTGTACATGTTCAAGAACAACAATCCTCT...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS-3UTR CAA 90 bp ACACTTTGCCATAAATTATCTTTGCCTGTCCCTAGTCTTTGCTTAGCAGCAAATCCATATTTTGGGTACTaGACAAAAGACACATTCACA +
Preference number: 5 (lower is better)
Translates to: TLCHKLSLPVPSLCLAANPYFGY*TKDTFT
Trigger: TGTGAATGTGTCTTTTGTCAAGTACCCAAAATATGG...ATTTGCTGCTAAGCAAAGACTAGGGACAGGCAAAGATAATTTATGGCAAAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000102801.8
CDS CCA 72 bp CCCAGCTATCCTGGAGCTGAACAGACTCTGGGGTGGTaGCCAGGTCGTTGGGCGCAGGAGCTGGGGCGTGGA +
Preference number: 6 (lower is better)
Translates to: PSYPGAEQTLGW*PGRWAQELGRG
Trigger: TCCACGCCCCAGCTCCTGCGCCCAACGACCTGGCCACCACCCCAGAGTCTGTTCAGCTCCAGGATAGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp GCACCCAGCTATCCTGGAGCTGAACAGACTCTGGGGTaGTGGCCAGGTCGTTGGGCGCAGGAGCTGGGGCGT +
Preference number: 6 (lower is better)
Translates to: APSYPGAEQTLG*WPGRWAQELGR
Trigger: ACGCCCCAGCTCCTGCGCCCAACGACCTGGCCACCACCCCAGAGTCTGTTCAGCTCCAGGATAGCTGGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 90 bp CTGCTGCTCCTTGGCCCAGGCAGTACCCAGGGCTCTCTGTCTCGCTaGGTCCAGGACGCGGGCCTTTTCTTCGTCCAGCGTGTCGGGGGT +
Preference number: 6 (lower is better)
Translates to: LLLLGPGSTQGSLSR*VQDAGLFFVQRVGG
Trigger: ACCCCCGACACGCTGGACGAAGAAAAGGCCCGCGTCCTGGACCAAGCGAGACAGAGAGCCCTGGGTACTGCCTGGGCCAAGGAGCAGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 72 bp ACTGGTCTGGGCACTGGACCCTCGCCAGCTCACAGTTaGGACCACCCCAGCCGGGGCTGCATAGACACTCTC +
Preference number: 6 (lower is better)
Translates to: TGLGTGPSPAHS*DHPSRGCIDTL
Trigger: GAGAGTGTCTATGCAGCCCCGGCTGGGGTGGTCTCAACTGTGAGCTGGCGAGGGTCCAGTGCCCAGACCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 72 bp TGGGCAGAGAGATGTTGCAGCGCCCAATGGTGGGGGTaGTGGTGCCTGCGAGGACGTGGGGCTCACTGTGGA +
Preference number: 6 (lower is better)
Translates to: WAERCCSAQWWG*WCLRGRGAHCG
Trigger: TCCACAGTGAGCCCCACGTCCTCGCAGGCACCATCACCCCCACCATTGGGCGCTGCAACATCTCTCTGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp GCACAAACACAGCCTCGTTCTGCACCAGAGTCTGGATaGTCCGGCGTTCCCTGGGCGACTCGACCACGCTCC +
Preference number: 6 (lower is better)
Translates to: AQTQPRSAPESG*SGVPWATRPRS
Trigger: GGAGCGTGGTCGAGTCGCCCAGGGAACGCCGGAGCATCCAGACTCTGGTGCAGAACGAGGCTGTGTTTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp CACAGCGGCAGGCTCCCCCGATGCAGACGCCGTGAGTaGCACAGTCTACTGAGCACACAACAGAGCAGTCGG +
Preference number: 6 (lower is better)
Translates to: HSGRLPRCRRRE*HSLLSTQQSSR
Trigger: CCGACTGCTCTGTTGTGTGCTCAGTAGACTGTGGCACTCACGGCGTCTGCATCGGGGGAGCCTGCCGCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp GTTCAGCACCCAGCTATCCTGGAGCTGAACAGACTCTaGGGTGGTGGCCAGGTCGTTGGGCGCAGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: VQHPAILELNRL*GGGQVVGRRSW
Trigger: CCAGCTCCTGCGCCCAACGACCTGGCCACCACCCCAGAGTCTGTTCAGCTCCAGGATAGCTGGGTGCTGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp TCTCCATTTCCCGGTGCAGACTGGTCACTACGCCCGTaGGGCGGGTCACATTGGTCAGACGGCCCTCGTGGT +
Preference number: 6 (lower is better)
Translates to: SPFPGADWSLRP*GGSHWSDGPRG
Trigger: ACCACGAGGGCCGTCTGACCAATGTGACCCGCCCCACGGGCGTAGTGACCAGTCTGCACCGGGAAATGGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp GGGGTGATGGTGCCTGCGAGGACGTGGGGCTCACTGTaGAAGCTGACAGCCATGCCGTTGGCGTACATCACC +
Preference number: 6 (lower is better)
Translates to: GVMVPARTWGSL*KLTAMPLAYIT
Trigger: GGTGATGTACGCCAACGGCATGGCTGTCAGCTTCCACAGTGAGCCCCACGTCCTCGCAGGCACCATCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp TTGGCCCAGGCAGTACCCAGGGCTCTCTGTCTCGCTTaGTCCAGGACGCGGGCCTTTTCTTCGTCCAGCGTG +
Preference number: 6 (lower is better)
Translates to: LAQAVPRALCLA*SRTRAFSSSSV
Trigger: CACGCTGGACGAAGAAAAGGCCCGCGTCCTGGACCAAGCGAGACAGAGAGCCCTGGGTACTGCCTGGGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 72 bp CACTGGTCTGGGCACTGGACCCTCGCCAGCTCACAGTaGAGACCACCCCAGCCGGGGCTGCATAGACACTCT +
Preference number: 6 (lower is better)
Translates to: HWSGHWTLASSQ*RPPQPGLHRHS
Trigger: AGAGTGTCTATGCAGCCCCGGCTGGGGTGGTCTCAACTGTGAGCTGGCGAGGGTCCAGTGCCCAGACCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 90 bp CAGACTTTCCCGTCGGCGAACATGCGGGACACGATCCGGCCTTGCTaGTCAATGTCTGTCCTCTCGCTCATGGCCCCTCGCTGGAGGCCG +
Preference number: 6 (lower is better)
Translates to: QTFPSANMRDTIRPC*SMSVLSLMAPRWRP
Trigger: CGGCCTCCAGCGAGGGGCCATGAGCGAGAGGACAGACATTGACAAGCAAGGCCGGATCGTGTCCCGCATGTTCGCCGACGGGAAAGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 90 bp GCTCCAGACTTTCCCGTCGGCGAACATGCGGGACACGATCCGGCCTaGCTTGTCAATGTCTGTCCTCTCGCTCATGGCCCCTCGCTGGAG +
Preference number: 6 (lower is better)
Translates to: APDFPVGEHAGHDPA*LVNVCPLAHGPSLE
Trigger: CTCCAGCGAGGGGCCATGAGCGAGAGGACAGACATTGACAAGCAAGGCCGGATCGTGTCCCGCATGTTCGCCGACGGGAAAGTCTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 72 bp GCCAGGTCGTTGGGCGCAGGAGCTGGGGCGTGGATTTaGCTCCGCCGATTGGTCAGTGAGTTCCTGTTGAGG +
Preference number: 6 (lower is better)
Translates to: ARSLGAGAGAWI*LRRLVSEFLLR
Trigger: CCTCAACAGGAACTCACTGACCAATCGGCGGAGTCAAATCCACGCCCCAGCTCCTGCGCCCAACGACCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp CAGAGCAGTCGGGACCCATCCAGTTCGGATCACAGCTaGAGAGGCCGGAGTCAGGGAGGTAAGTGCCATGCC +
Preference number: 6 (lower is better)
Translates to: QSSRDPSSSDHS*RGRSQGGKCHA
Trigger: GGCATGGCACTTACCTCCCTGACTCCGGCCTCTGCAGCTGTGATCCGAACTGGATGGGTCCCGACTGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp TGGGCACACGGCAGTCCTCACTGTCCAGAGAGGAGCTaGTGTAGCGACACTCTTTGCCACACCGTCCCCTGG +
Preference number: 6 (lower is better)
Translates to: WAHGSPHCPERS*CSDTLCHTVPW
Trigger: CCAGGGGACGGTGTGGCAAAGAGTGTCGCTACACCAGCTCCTCTCTGGACAGTGAGGACTGCCGTGTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 90 bp TGCCCACTACACTGGTCTGGGCACTGGACCCTCGCCAGCTCACAGTaGAGACCACCCCAGCCGGGGCTGCATAGACACTCTCCATTCACA +
Preference number: 6 (lower is better)
Translates to: CPLHWSGHWTLASSQ*RPPQPGLHRHSPFT
Trigger: TGTGAATGGAGAGTGTCTATGCAGCCCCGGCTGGGGTGGTCTCAACTGTGAGCTGGCGAGGGTCCAGTGCCCAGACCAGTGTAGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 72 bp TCTCCAGCACCTTGCGCCCAATGGTGGTTCCTAGCGTaGCCAGGTCACCATCCGCGGCGCCGATCTTCACAA +
Preference number: 6 (lower is better)
Translates to: SPAPCAQWWFLA*PGHHPRRRSSQ
Trigger: TTGTGAAGATCGGCGCCGCGGATGGTGACCTGGTCACGCTAGGAACCACCATTGGGCGCAAGGTGCTGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp TCCCTCCCTCGGTGTCCGAGTCTGCATCAGACCCAGTaGTCAGGGAGTAGCCCTGGTGGAGGATACCCATGT +
Preference number: 6 (lower is better)
Translates to: SLPRCPSLHQTQ*SGSSPGGGYPC
Trigger: ACATGGGTATCCTCCACCAGGGCTACTCCCTGAGCACTGGGTCTGATGCAGACTCGGACACCGAGGGAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp CACAGCGGCAGGCTCCCCCGATGCAGACGCCGTGAGTaGCACAGTCTACTGAGCACACTTCAACAGAGCAGT +
Preference number: 6 (lower is better)
Translates to: HSGRLPRCRRRE*HSLLSTLQQSS
Trigger: ACTGCTCTGTTGAAGTGTGCTCAGTAGACTGTGGCACTCACGGCGTCTGCATCGGGGGAGCCTGCCGCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000057207.6
CDS GCA 72 bp TTCCCGTCGGCGAACATGCGGGACACGATCCGGCCTTaGTTGTCAATGTCTGTCCTCTCGCTCATGGCCCCT +
Preference number: 6 (lower is better)
Translates to: FPSANMRDTIRP*LSMSVLSLMAP
Trigger: AGGGGCCATGAGCGAGAGGACAGACATTGACAAGCAAGGCCGGATCGTGTCCCGCATGTTCGCCGACGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp TACTGCACAAACACAGCCTCGTTCTGCACCAGAGTCTaGATGCTCCGGCGTTCCCTGGGCGACTCGACCACG +
Preference number: 6 (lower is better)
Translates to: YCTNTASFCTRV*MLRRSLGDSTT
Trigger: CGTGGTCGAGTCGCCCAGGGAACGCCGGAGCATCCAGACTCTGGTGCAGAACGAGGCTGTGTTTGTGCAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp TCAGGCGCCACTCGATGGAGTTCAGGCCATTCTCCATaGGCAGAGAGATGTTGCAGCGCCCAATGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: SGATRWSSGHSP*AERCCSAQWWG
Trigger: CCCCCACCATTGGGCGCTGCAACATCTCTCTGCCCATGGAGAATGGCCTGAACTCCATCGAGTGGCGCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp GGTCGGAGTAGAAGTACTGTAGGTGGTGGCCCAGGTTaGTCTTGTAGGAAGCCCGGCGGCCCACTCCGTCAT +
Preference number: 6 (lower is better)
Translates to: GRSRSTVGGGPG*SCRKPGGPLRH
Trigger: ATGACGGAGTGGGCCGCCGGGCTTCCTACAAGACCAACCTGGGCCACCACCTACAGTACTTCTACTCCGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 72 bp TTTCCCGTCGGCGAACATGCGGGACACGATCCGGCCTaGCTTGTCAATGTCTGTCCTCTCGCTCATGGCCCC +
Preference number: 6 (lower is better)
Translates to: FPVGEHAGHDPA*LVNVCPLAHGP
Trigger: GGGGCCATGAGCGAGAGGACAGACATTGACAAGCAAGGCCGGATCGTGTCCCGCATGTTCGCCGACGGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 72 bp GGATTTGACTCCGCCGATTGGTCAGTGAGTTCCTGTTaGGGGAGTTGGCCGAGGAGTGGTGGTGGGACAGGG +
Preference number: 6 (lower is better)
Translates to: GFDSADWSVSSC*GSWPRSGGGTG
Trigger: CCCTGTCCCACCACCACTCCTCGGCCAACTCCCTCAACAGGAACTCACTGACCAATCGGCGGAGTCAAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 72 bp AGCTGGGGCGTGGATTTGACTCCGCCGATTGGTCAGTaGGTTCCTGTTGAGGGAGTTGGCCGAGGAGTGGTG +
Preference number: 6 (lower is better)
Translates to: SWGVDLTPPIGQ*VPVEGVGRGVV
Trigger: CACCACTCCTCGGCCAACTCCCTCAACAGGAACTCACTGACCAATCGGCGGAGTCAAATCCACGCCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 72 bp ACTTCACTGCAGGCCAGTCTGTCTGACCTTGCTGAATaGTGTCCAAGGGGTCCCGAGACCCCCGGCAGAGCA +
Preference number: 6 (lower is better)
Translates to: TSLQASLSDLAE*CPRGPETPGRA
Trigger: TGCTCTGCCGGGGGTCTCGGGACCCCTTGGACATCATTCAGCAAGGTCAGACAGACTGGCCTGCAGTGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp CACTGTCCAGAGAGGAGCTGGTGTAGCGACACTCTTTaGCACACCGTCCCCTGGTCAAAGAGCGATGTCGCC +
Preference number: 6 (lower is better)
Translates to: HCPERSWCSDTL*HTVPWSKSDVA
Trigger: GGCGACATCGCTCTTTGACCAGGGGACGGTGTGGCAAAGAGTGTCGCTACACCAGCTCCTCTCTGGACAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp ATGTTCTGGAGACATCCCTCCCTCGGTGTCCGAGTCTaGATCAGACCCAGTGCTCAGGGAGTAGCCCTGGTG +
Preference number: 6 (lower is better)
Translates to: MFWRHPSLGVRV*IRPSAQGVALV
Trigger: CACCAGGGCTACTCCCTGAGCACTGGGTCTGATGCAGACTCGGACACCGAGGGAGGGATGTCTCCAGAACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp CGTTCTGCACCAGAGTCTGGATGCTCCGGCGTTCCCTaGGCGACTCGACCACGCTCCATTTCTCCTTTCCAT +
Preference number: 6 (lower is better)
Translates to: RSAPESGCSGVP*ATRPRSISPFH
Trigger: ATGGAAAGGAGAAATGGAGCGTGGTCGAGTCGCCCAGGGAACGCCGGAGCATCCAGACTCTGGTGCAGAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp CAGTGCATAGGCCGTCCCGCGATGATGCTGACCTGGTaGTTCTCCGTGATCCGCAGGATGACGTTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: QCIGRPAMMLTW*FSVIRRMTLFS
Trigger: GGAGAACAACGTCATCCTGCGGATCACGGAGAACCACCAGGTCAGCATCATCGCGGGACGGCCTATGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 90 bp GATGCGGTCATAGAAGGACTTCACTGCAGGCCAGTCTGTCTGACCTaGCTGAATGATGTCCAAGGGGTCCCGAGACCCCCGGCAGAGCAG +
Preference number: 6 (lower is better)
Translates to: DAVIEGLHCRPVCLT*LNDVQGVPRPPAEQ
Trigger: CTGCTCTGCCGGGGGTCTCGGGACCCCTTGGACATCATTCAGCAAGGTCAGACAGACTGGCCTGCAGTGAAGTCCTTCTATGACCGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 90 bp AGGATGACGTTGTTCTCCAGAACGTACAGGGAGTTGTCCATGGGGTaGACGGCGAGGTCTGTCGGCCATTCTAGACGGACCTGGGCCACG +
Preference number: 6 (lower is better)
Translates to: RMTLFSRTYRELSMG*TARSVGHSRRTWAT
Trigger: CGTGGCCCAGGTCCGTCTAGAATGGCCGACAGACCTCGCCGTCAACCCCATGGACAACTCCCTGTACGTTCTGGAGAACAACGTCATCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 72 bp TGGCAGCAGGCGGGGTGGTGGTGTATAAACGGTCCCTaGGGTCAAAGGGTATCCCGGAGAAGAGCTGCTGAA +
Preference number: 6 (lower is better)
Translates to: WQQAGWWCINGP*GQRVSRRRAAE
Trigger: TTCAGCAGCTCTTCTCCGGGATACCCTTTGACCTCAGGGACCGTTTATACACCACCACCCCGCCTGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 72 bp TGGCTGATTCCAGCGCAGAATGGATGGCGAGTTTGCTaGGCGAGTAGTCGATGCCGGGAACCTGGCAGTGCA +
Preference number: 6 (lower is better)
Translates to: WLIPAQNGWRVC*ASSRCREPGSA
Trigger: TGCACTGCCAGGTTCCCGGCATCGACTACTCGCTCAGCAAACTCGCCATCCATTCTGCGCTGGAATCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp ATGCCAGCAAAATGGCCAAGAGGAGGGCGGCGGCGATaGCAGACAGGGCAGCGCATTTCCAACTGCAGTATT +
Preference number: 6 (lower is better)
Translates to: MPAKWPRGGRRR*QTGQRISNCSI
Trigger: AATACTGCAGTTGGAAATGCGCTGCCCTGTCTGCCATCGCCGCCGCCCTCCTCTTGGCCATTTTGCTGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp GCAGACTGGTCACTACGCCCGTGGGGCGGGTCACATTaGTCAGACGGCCCTCGTGGTCATAGTCATAAAAAG +
Preference number: 6 (lower is better)
Translates to: ADWSLRPWGGSH*SDGPRGHSHKK
Trigger: CTTTTTATGACTATGACCACGAGGGCCGTCTGACCAATGTGACCCGCCCCACGGGCGTAGTGACCAGTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp CCACTCCGTCATAGCGGTACTGCACGCTCCATCCGCTaGCCTTGTTGTATGCTCTTGTCAGAAGGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: PLRHSGTARSIR*PCCMLLSEGPW
Trigger: CCAAGGGCCTTCTGACAAGAGCATACAACAAGGCCAGCGGATGGAGCGTGCAGTACCGCTATGACGGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 72 bp CGCAGGATGACGTTGTTCTCCAGAACGTACAGGGAGTaGTCCATGGGGTTGACGGCGAGGTCTGTCGGCCAT +
Preference number: 6 (lower is better)
Translates to: RRMTLFSRTYRE*SMGLTARSVGH
Trigger: ATGGCCGACAGACCTCGCCGTCAACCCCATGGACAACTCCCTGTACGTTCTGGAGAACAACGTCATCCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 72 bp AGCTGCGCCTGGATTTTATCCCTCGTCCCCACAGTCTaGTGGCATGTTCTGGAGACATCCCTCCCTCGGTGT +
Preference number: 6 (lower is better)
Translates to: SCAWILSLVPTV*WHVLETSLPRC
Trigger: ACACCGAGGGAGGGATGTCTCCAGAACATGCCATCAGACTGTGGGGACGAGGGATAAAATCCAGGCGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp CCTCCACATGGTGTAGTCGGGGGACGTCCACCGTCCTaGCAGCACGTCATAATCACGTTGAGTAAAGTGGAC +
Preference number: 6 (lower is better)
Translates to: PPHGVVGGRPPS*QHVIITLSKVD
Trigger: GTCCACTTTACTCAACGTGATTATGACGTGCTGGCAGGACGGTGGACGTCCCCCGACTACACCATGTGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp AGCTGGTGTAGCGACACTCTTTGCCACACCGTCCCCTaGTCAAAGAGCGATGTCGCCGGTCCTTTACATCCA +
Preference number: 6 (lower is better)
Translates to: SWCSDTLCHTVP*SKSDVAGPLHP
Trigger: TGGATGTAAAGGACCGGCGACATCGCTCTTTGACCAGGGGACGGTGTGGCAAAGAGTGTCGCTACACCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp GAGGATACCCATGTCGGAACAGTAACCACTTCGGTGTaGGGAGGGCTCGCAGATTCCCAATTCTGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: EDTHVGTVTTSV*GGLADSQFCQG
Trigger: ACCCTGGCAGAATTGGGAATCTGCGAGCCCTCCCCACACCGAAGTGGTTACTGTTCCGACATGGGTATCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp CTTCAGCTTGAAGGCCTTCCTGGAGAATGTATTCCGTaGCAGCAGGCGGGGTGGTGGTGTATAAACGGTCCC +
Preference number: 6 (lower is better)
Translates to: LQLEGLPGECIP*QQAGWWCINGP
Trigger: GGGACCGTTTATACACCACCACCCCGCCTGCTGCCACGGAATACATTCTCCAGGAAGGCCTTCAAGCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp ACTGATGTGAATCTGGGACCTCCAAAACACCCCTGGTaGGACTTCCTGTGTCACCCGCCGACCAACTTCTGC +
Preference number: 6 (lower is better)
Translates to: TDVNLGPPKHPW*DFLCHPPTNFC
Trigger: GCAGAAGTTGGTCGGCGGGTGACACAGGAAGTCCCACCAGGGGTGTTTTGGAGGTCCCAGATTCACATCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp CTGACTGATGTGAATCTGGGACCTCCAAAACACCCCTaGTGGGACTTCCTGTGTCACCCGCCGACCAACTTC +
Preference number: 6 (lower is better)
Translates to: LTDVNLGPPKHP*WDFLCHPPTNF
Trigger: GAAGTTGGTCGGCGGGTGACACAGGAAGTCCCACCAGGGGTGTTTTGGAGGTCCCAGATTCACATCAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 72 bp ATAGAAGGACTTCACTGCAGGCCAGTCTGTCTGACCTaGCTGAATGATGTCCAAGGGGTCCCGAGACCCCCG +
Preference number: 6 (lower is better)
Translates to: IEGLHCRPVCLT*LNDVQGVPRPP
Trigger: CGGGGGTCTCGGGACCCCTTGGACATCATTCAGCAAGGTCAGACAGACTGGCCTGCAGTGAAGTCCTTCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 72 bp TTGTTCTCCAGAACGTACAGGGAGTTGTCCATGGGGTaGACGGCGAGGTCTGTCGGCCATTCTAGACGGACC +
Preference number: 6 (lower is better)
Translates to: LFSRTYRELSMG*TARSVGHSRRT
Trigger: GGTCCGTCTAGAATGGCCGACAGACCTCGCCGTCAACCCCATGGACAACTCCCTGTACGTTCTGGAGAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 90 bp CGGGGCATGCCACTGCTGTCCCGGCGGATCTTTAGGGAATTCCCGTaGTTGTCAATCAACTCGGTGACGTCATTGTCAGCGCTGTATGTG +
Preference number: 6 (lower is better)
Translates to: RGMPLLSRRIFREFP*LSINSVTSLSALYV
Trigger: CACATACAGCGCTGACAATGACGTCACCGAGTTGATTGACAACAACGGGAATTCCCTAAAGATCCGCCGGGACAGCAGTGGCATGCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 72 bp GTGCGCTCCTGGCTCATGAAAGGGGCTCGCTCAAAGTaGAGAGTCAAGGCAGAACCCCCATTGGCAATCAGA +
Preference number: 6 (lower is better)
Translates to: VRSWLMKGARSK*RVKAEPPLAIR
Trigger: TCTGATTGCCAATGGGGGTTCTGCCTTGACTCTTCACTTTGAGCGAGCCCCTTTCATGAGCCAGGAGCGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 72 bp GAGCACCCCAGTGTGAGAAATAGCAATGGCGCTGGCTaGTTCCAGCGCAGAATGGATGGCGAGTTTGCTGAG +
Preference number: 6 (lower is better)
Translates to: EHPSVRNSNGAG*FQRRMDGEFAE
Trigger: CTCAGCAAACTCGCCATCCATTCTGCGCTGGAATCAGCCAGCGCCATTGCTATTTCTCACACTGGGGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp AGGGGTGTGCTTCCAGACGACGTCTTGAAAAGGAAGTaGCGAGTCTCCAGTGGGACGTTACTGTTCAGCACC +
Preference number: 6 (lower is better)
Translates to: RGVLPDDVLKRK*RVSSGTLLFST
Trigger: GGTGCTGAACAGTAACGTCCCACTGGAGACTCGGCACTTCCTTTTCAAGACGTCGTCTGGAAGCACACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp GCCGGTCCTTACGCCATTGTTAAAGGTGTGTCCATCTaGCGGCTGGAGTTGCCAATTGAGTCCGAGCAGATG +
Preference number: 6 (lower is better)
Translates to: AGPYAIVKGVSI*RLELPIESEQM
Trigger: CATCTGCTCGGACTCAATTGGCAACTCCAGCCGGCAGATGGACACACCTTTAACAATGGCGTAAGGACCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp GATAGGAATAGCTCCAGACTTTCCCGTCGGCGAACATaGGGGACACGATCCGGCCTTGCTTGTCAATGTCTG +
Preference number: 6 (lower is better)
Translates to: DRNSSRLSRRRT*GTRSGLACQCL
Trigger: CAGACATTGACAAGCAAGGCCGGATCGTGTCCCGCATGTTCGCCGACGGGAAAGTCTGGAGCTATTCCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp GGACATGCTGTGCCGGGCGACACTGGGCATAGTGACTaGGTGGAGGCGATCGGAGGAGTCATATTCAAATAT +
Preference number: 6 (lower is better)
Translates to: GHAVPGDTGHSD*VEAIGGVIFKY
Trigger: ATATTTGAATATGACTCCTCCGATCGCCTCCACGCAGTCACTATGCCCAGTGTCGCCCGGCACAGCATGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp AGGCTGCTATTGAAGGGGTTGTCTCCAGGAATGATGTaGGTGCTGTCCTTGCCTGCCAAGAGCTTGATGCGG +
Preference number: 6 (lower is better)
Translates to: RLLLKGLSPGMM*VLSLPAKSLMR
Trigger: CCGCATCAAGCTCTTGGCAGGCAAGGACAGCACCCACATCATTCCTGGAGACAACCCCTTCAATAGCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp CATTACCAGGGTGTCCATGGCATAGAAGCTGTTCCATaGCAGCCACACTGTGCGCTCCTGGCTCATGAAAGG +
Preference number: 6 (lower is better)
Translates to: HYQGVHGIEAVP*QPHCALLAHER
Trigger: CCTTTCATGAGCCAGGAGCGCACAGTGTGGCTGCCATGGAACAGCTTCTATGCCATGGACACCCTGGTAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp GCCAGGAAGGCCTGGTTATGCCTCTCAGTTGTCTGCTaGACACCTGTAATGAGCTGTCCGTTCTCGCTTGCT +
Preference number: 6 (lower is better)
Translates to: ARKAWLCLSVVC*TPVMSCPFSLA
Trigger: AGCAAGCGAGAACGGACAGCTCATTACAGGTGTCCAGCAGACAACTGAGAGGCATAACCAGGCCTTCCTGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 72 bp CCTCGGATCAGAGACACCAGGCTGCTATTGAAGGGGTaGTCTCCAGGAATGATGTGGGTGCTGTCCTTGCCT +
Preference number: 6 (lower is better)
Translates to: PRIRDTRLLLKG*SPGMMWVLSLP
Trigger: AGGCAAGGACAGCACCCACATCATTCCTGGAGACAACCCCTTCAATAGCAGCCTGGTGTCTCTGATCCGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 90 bp AGGGCAGCGCATTTCCAACTGCAGTATTTGGAGGGTTTCTTCAGCTaGAAGGCCTTCCTGGAGAATGTATTCCGTGGCAGCAGGCGGGGT +
Preference number: 6 (lower is better)
Translates to: RAAHFQLQYLEGFFS*KAFLENVFRGSRRG
Trigger: ACCCCGCCTGCTGCCACGGAATACATTCTCCAGGAAGGCCTTCAAGCTGAAGAAACCCTCCAAATACTGCAGTTGGAAATGCGCTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 90 bp GCGGCGGCGATGGCAGACAGGGCAGCGCATTTCCAACTGCAGTATTaGGAGGGTTTCTTCAGCTTGAAGGCCTTCCTGGAGAATGTATTC +
Preference number: 6 (lower is better)
Translates to: AAAMADRAAHFQLQY*EGFFSLKAFLENVF
Trigger: GAATACATTCTCCAGGAAGGCCTTCAAGCTGAAGAAACCCTCCAAATACTGCAGTTGGAAATGCGCTGCCCTGTCTGCCATCGCCGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 90 bp ACTCCTGTGGTCACCCGCCCTTCTTTGATGGCAAACATGATGCCTTaGCCGATGATGGGTGTGGTGGTAGCAAACCAGTGGCCTGCTTTC +
Preference number: 6 (lower is better)
Translates to: TPVVTRPSLMANMMP*PMMGVVVANQWPAF
Trigger: GAAAGCAGGCCACTGGTTTGCTACCACCACACCCATCATCGGCAAAGGCATCATGTTTGCCATCAAAGAAGGGCGGGTGACCACAGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 72 bp GTAGATTCGGCGACTGTTGGTGTCAGAGACGTAGAGTaGGCCGGTCACGGGGTCCACAGCCAAGTAATACTT +
Preference number: 6 (lower is better)
Translates to: VDSATVGVRDVE*AGHGVHSQVIL
Trigger: AAGTATTACTTGGCTGTGGACCCCGTGACCGGCTCACTCTACGTCTCTGACACCAACAGTCGCCGAATCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp TCACCCGCCGACCAACTTCTGCTTCGCCACTGTCTATaGTGCTGTTTTTCAATGACCAGGGCACTTTGCCTC +
Preference number: 6 (lower is better)
Translates to: SPADQLLLRHCL*CCFSMTRALCL
Trigger: GAGGCAAAGTGCCCTGGTCATTGAAAAACAGCAGCATAGACAGTGGCGAAGCAGAAGTTGGTCGGCGGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp AGAGCCAGGAAGGCCTGGTTATGCCTCTCAGTTGTCTaGTGGACACCTGTAATGAGCTGTCCGTTCTCGCTT +
Preference number: 6 (lower is better)
Translates to: RARKAWLCLSVV*WTPVMSCPFSL
Trigger: AAGCGAGAACGGACAGCTCATTACAGGTGTCCAGCAGACAACTGAGAGGCATAACCAGGCCTTCCTGGCTCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp GCCGATGATGGGTGTGGTGGTAGCAAACCAGTGGCCTaGTTTCTCTCGGATGCTGGCATGGAGCTTTTTAGT +
Preference number: 6 (lower is better)
Translates to: ADDGCGGSKPVA*FLSDAGMELFS
Trigger: ACTAAAAAGCTCCATGCCAGCATCCGAGAGAAAGCAGGCCACTGGTTTGCTACCACCACACCCATCATCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp AGACGACGTCTTGAAAAGGAAGTGCCGAGTCTCCAGTaGGACGTTACTGTTCAGCACCCAGCTATCCTGGAG +
Preference number: 6 (lower is better)
Translates to: RRRLEKEVPSLQ*DVTVQHPAILE
Trigger: CTCCAGGATAGCTGGGTGCTGAACAGTAACGTCCCACTGGAGACTCGGCACTTCCTTTTCAAGACGTCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp GCAGCACACACGCAGTTCCCATCAATGCAGGAGCCATaGCCCCCACAGGAAGGATCGATACATTGGTTCATA +
Preference number: 6 (lower is better)
Translates to: AAHTQFPSMQEP*PPQEGSIHWFI
Trigger: TATGAACCAATGTATCGATCCTTCCTGTGGGGGCCATGGCTCCTGCATTGATGGGAACTGCGTGTGTGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp TTTCGGGTGGGTTGTAAATGTTTCGGATGTAACCAATaGAGGTGTGCGTGGACATGCTGTGCCGGGCGACAC +
Preference number: 6 (lower is better)
Translates to: FRVGCKCFGCNQ*RCAWTCCAGRH
Trigger: GTGTCGCCCGGCACAGCATGTCCACGCACACCTCCATTGGTTACATCCGAAACATTTACAACCCACCCGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp GCTGGCCGTCCCCGTCATAGTCATAGGTGTACTTTGTaGTGTTGGCATAGGGCCCTAGTTTCAGTTCCCTCT +
Preference number: 6 (lower is better)
Translates to: AGRPRHSHRCTL*CWHRALVSVPS
Trigger: AGAGGGAACTGAAACTAGGGCCCTATGCCAACACCACAAAGTACACCTATGACTATGACGGGGACGGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp GCAAACCAGTGGCCTGCTTTCTCTCGGATGCTGGCATaGAGCTTTTTAGTGATGACCTGTCCTTCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: ANQWPAFSRMLA*SFLVMTCPSRA
Trigger: GGCTCTGGAAGGACAGGTCATCACTAAAAAGCTCCATGCCAGCATCCGAGAGAAAGCAGGCCACTGGTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 72 bp TCCAGGCAGTCCACCAGGCCATCTCCCTCATTATCCTaGTTATCAGCGCAGGAGGTTTCCATGGCAACGTTG +
Preference number: 6 (lower is better)
Translates to: SRQSTRPSPSLS*LSAQEVSMATL
Trigger: CAACGTTGCCATGGAAACCTCCTGCGCTGATAACAAGGATAATGAGGGAGATGGCCTGGTGGACTGCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 72 bp CTGCTGTCCCGGCGGATCTTTAGGGAATTCCCGTTGTaGTCAATCAACTCGGTGACGTCATTGTCAGCGCTG +
Preference number: 6 (lower is better)
Translates to: LLSRRIFREFPL*SINSVTSLSAL
Trigger: CAGCGCTGACAATGACGTCACCGAGTTGATTGACAACAACGGGAATTCCCTAAAGATCCGCCGGGACAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 72 bp CCACTGCTGTCCCGGCGGATCTTTAGGGAATTCCCGTaGTTGTCAATCAACTCGGTGACGTCATTGTCAGCG +
Preference number: 6 (lower is better)
Translates to: PLLSRRIFREFP*LSINSVTSLSA
Trigger: CGCTGACAATGACGTCACCGAGTTGATTGACAACAACGGGAATTCCCTAAAGATCCGCCGGGACAGCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 72 bp AATTTCCAGCCAGGTCTTTGGCTCCGCTCAGAGACTTaGCTCGGTAGATTCGGCGACTGTTGGTGTCAGAGA +
Preference number: 6 (lower is better)
Translates to: NFQPGLWLRSET*LGRFGDCWCQR
Trigger: TCTCTGACACCAACAGTCGCCGAATCTACCGAGTCAAGTCTCTGAGCGGAGCCAAAGACCTGGCTGGAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp AGCTGTTCTGACCCAGTGTGCATCTCCCGTTACCGTTaGACAAATCAGGGCAGCCATCAATGGTGCAGTGTT +
Preference number: 6 (lower is better)
Translates to: SCSDPVCISRYR*TNQGSHQWCSV
Trigger: AACACTGCACCATTGATGGCTGCCCTGATTTGTGCAACGGTAACGGGAGATGCACACTGGGTCAGAACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp GCGGTACTGCACGCTCCATCCGCTGGCCTTGTTGTATaGTCTTGTCAGAAGGCCCTTGGAGTTGTATTCAAA +
Preference number: 6 (lower is better)
Translates to: AVLHAPSAGLVV*SCQKALGVVFK
Trigger: TTTGAATACAACTCCAAGGGCCTTCTGACAAGAGCATACAACAAGGCCAGCGGATGGAGCGTGCAGTACCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp TTAGTGATGACCTGTCCTTCCAGAGCCAGGAAGGCCTaGTTATGCCTCTCAGTTGTCTGCTGGACACCTGTA +
Preference number: 6 (lower is better)
Translates to: LVMTCPSRARKA*LCLSVVCWTPV
Trigger: TACAGGTGTCCAGCAGACAACTGAGAGGCATAACCAGGCCTTCCTGGCTCTGGAAGGACAGGTCATCACTAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 72 bp ATGGCAGACAGGGCAGCGCATTTCCAACTGCAGTATTaGGAGGGTTTCTTCAGCTTGAAGGCCTTCCTGGAG +
Preference number: 6 (lower is better)
Translates to: MADRAAHFQLQY*EGFFSLKAFLE
Trigger: CTCCAGGAAGGCCTTCAAGCTGAAGAAACCCTCCAAATACTGCAGTTGGAAATGCGCTGCCCTGTCTGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 72 bp ACATCATCGTTTCCTGGTAAGCCGGTCCTTACGCCATaGTTAAAGGTGTGTCCATCTGCCGGCTGGAGTTGC +
Preference number: 6 (lower is better)
Translates to: TSSFPGKPVLTP*LKVCPSAGWSC
Trigger: GCAACTCCAGCCGGCAGATGGACACACCTTTAACAATGGCGTAAGGACCGGCTTACCAGGAAACGATGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 72 bp TGTAGTATTCCGCTTTTCACATTGAGGGTGTGGTGTTaGTCCAGGGACCAGCCTCCAAGGTTGGAAGGGTCC +
Preference number: 6 (lower is better)
Translates to: CSIPLFTLRVWC*SRDQPPRLEGS
Trigger: GGACCCTTCCAACCTTGGAGGCTGGTCCCTGGACAAACACCACACCCTCAATGTGAAAAGCGGAATACTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 72 bp CTTTCGGTACCTGATGGTACAGGAGAAACCCCCACTTaGGAGATTGACCATCTTCAGGACACCGGTGGTCTC +
Preference number: 6 (lower is better)
Translates to: LSVPDGTGETPT*EIDHLQDTGGL
Trigger: GAGACCACCGGTGTCCTGAAGATGGTCAATCTCCAAAGTGGGGGTTTCTCCTGTACCATCAGGTACCGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 72 bp ATACTGAGCAGCAGCGTGGAGTACTGGAACTCAATGTaGGTGAACCTTCGAGTCCTGCCATTCACCAGCAGC +
Preference number: 6 (lower is better)
Translates to: ILSSSVEYWNSM*VNLRVLPFTSS
Trigger: GCTGCTGGTGAATGGCAGGACTCGAAGGTTCACCAACATTGAGTTCCAGTACTCCACGCTGCTGCTCAGTAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 90 bp GTCCCTTTGTGTAGTATTCCGCTTTTCACATTGAGGGTGTGGTGTTaGTCCAGGGACCAGCCTCCAAGGTTGGAAGGGTCCAGCTCGAAT +
Preference number: 6 (lower is better)
Translates to: VPLCSIPLFTLRVWC*SRDQPPRLEGSSSN
Trigger: ATTCGAGCTGGACCCTTCCAACCTTGGAGGCTGGTCCCTGGACAAACACCACACCCTCAATGTGAAAAGCGGAATACTACACAAAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 90 bp GGCATGCCACTGCTGTCCCGGCGGATCTTTAGGGAATTCCCGTTGTaGTCAATCAACTCGGTGACGTCATTGTCAGCGCTGTATGTGAAA +
Preference number: 6 (lower is better)
Translates to: GMPLLSRRIFREFPL*SINSVTSLSALYVK
Trigger: TTTCACATACAGCGCTGACAATGACGTCACCGAGTTGATTGACAACAACGGGAATTCCCTAAAGATCCGCCGGGACAGCAGTGGCATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 90 bp GTAGGTGGAATGGGACGACCATTGTCGTCATCCGATTTATTTTCATaGTCAGAGTCAGTCAGAGTAAGGGCCGAGTTCTCGCGGCTGGAC +
Preference number: 6 (lower is better)
Translates to: VGGMGRPLSSSDLFS*SESVRVRAEFSRLD
Trigger: GTCCAGCCGCGAGAACTCGGCCCTTACTCTGACTGACTCTGACAATGAAAATAAATCGGATGACGACAATGGTCGTCCCATTCCACCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 90 bp ACTGTTGCCACATCATCGTTTCCTGGTAAGCCGGTCCTTACGCCATaGTTAAAGGTGTGTCCATCTGCCGGCTGGAGTTGCCAATTGAGT +
Preference number: 6 (lower is better)
Translates to: TVATSSFPGKPVLTP*LKVCPSAGWSCQLS
Trigger: ACTCAATTGGCAACTCCAGCCGGCAGATGGACACACCTTTAACAATGGCGTAAGGACCGGCTTACCAGGAAACGATGATGTGGCAACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 72 bp TTCTGGAAGAGATGCCCCTCTACAGCAACCATCAAGTaGACCCTGATGAGGTTCAAGGGCACTGTGGACTGT +
Preference number: 6 (lower is better)
Translates to: FWKRCPSTATIK*TLMRFKGTVDC
Trigger: ACAGTCCACAGTGCCCTTGAACCTCATCAGGGTTCACTTGATGGTTGCTGTAGAGGGGCATCTCTTCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 72 bp TCTTCAGGACACCGGTGGTCTCGTCATACCCAAAGGTaGCGGCTGTGCTGTCGTAGACTATCTCTGATAACT +
Preference number: 6 (lower is better)
Translates to: SSGHRWSRHTQR*RLCCRRLSLIT
Trigger: AGTTATCAGAGATAGTCTACGACAGCACAGCCGTCACCTTTGGGTATGACGAGACCACCGGTGTCCTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp TGCCAAGAGCTTGATGCGGTCATAGAAGGACTTCACTaGAGGCCAGTCTGTCTGACCTTGCTGAATGATGTC +
Preference number: 6 (lower is better)
Translates to: CQELDAVIEGLH*RPVCLTLLNDV
Trigger: GACATCATTCAGCAAGGTCAGACAGACTGGCCTGCAGTGAAGTCCTTCTATGACCGCATCAAGCTCTTGGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp TGCCGTTGGCGTACATCACCCGCAGGGTTCCATTATTaGAGAGCTGGTAGCTGTTTCGCACTTGATCTTGTA +
Preference number: 6 (lower is better)
Translates to: CRWRTSPAGFHY*RAGSCFALDLV
Trigger: TACAAGATCAAGTGCGAAACAGCTACCAGCTCTGCAATAATGGAACCCTGCGGGTGATGTACGCCAACGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp CTTACGCCATTGTTAAAGGTGTGTCCATCTGCCGGCTaGAGTTGCCAATTGAGTCCGAGCAGATGCATTGCT +
Preference number: 6 (lower is better)
Translates to: LTPLLKVCPSAG*SCQLSPSRCIA
Trigger: AGCAATGCATCTGCTCGGACTCAATTGGCAACTCCAGCCGGCAGATGGACACACCTTTAACAATGGCGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp ATTGTTGTTCTTGAACATGTACAGGTTGAAGGGGGCTaGCTCCTTGCCCACGTTCCTCCACATGGTGTAGTC +
Preference number: 6 (lower is better)
Translates to: IVVLEHVQVEGG*LLAHVPPHGVV
Trigger: GACTACACCATGTGGAGGAACGTGGGCAAGGAGCCAGCCCCCTTCAACCTGTACATGTTCAAGAACAACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 90 bp GGTCCTTACGCCATTGTTAAAGGTGTGTCCATCTGCCGGCTGGAGTaGCCAATTGAGTCCGAGCAGATGCATTGCTATGAAATATGCCAG +
Preference number: 6 (lower is better)
Translates to: GPYAIVKGVSICRLE*PIESEQMHCYEICQ
Trigger: CTGGCATATTTCATAGCAATGCATCTGCTCGGACTCAATTGGCAACTCCAGCCGGCAGATGGACACACCTTTAACAATGGCGTAAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 90 bp TCCACGGAGGAGAGGTTGGTGATCACAGTGACGTCATCATCCCGGTaGGAGTTCTCAATGTCAATGGTGATAGATTTCTCCATTTCCCGG +
Preference number: 6 (lower is better)
Translates to: STEERLVITVTSSSR*EFSMSMVIDFSISR
Trigger: CCGGGAAATGGAGAAATCTATCACCATTGACATTGAGAACTCCAACCGGGATGATGACGTCACTGTGATCACCAACCTCTCCTCCGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 72 bp CCAGACTCACAGTGTACTGATGGATACCATCAGCGTTaGACACGTACAATTCCTGTTCTCCCGGAGATGCAG +
Preference number: 6 (lower is better)
Translates to: PDSQCTDGYHQR*TRTIPVLPEMQ
Trigger: CTGCATCTCCGGGAGAACAGGAATTGTACGTGTTCAACGCTGATGGTATCCATCAGTACACTGTGAGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp CTGTTCTCCCGGAGATGCAGCCTCATACTGGTTGAATaGGTTAAGAACGGGTTTATTTTTGCTGACCGCCCT +
Preference number: 6 (lower is better)
Translates to: LFSRRCSLILVE*VKNGFIFADRP
Trigger: AGGGCGGTCAGCAAAAATAAACCCGTTCTTAACGCATTCAACCAGTATGAGGCTGCATCTCCGGGAGAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp AGCGTTGAACACGTACAATTCCTGTTCTCCCGGAGATaGAGCCTCATACTGGTTGAATGCGTTAAGAACGGG +
Preference number: 6 (lower is better)
Translates to: SVEHVQFLFSRR*SLILVECVKNG
Trigger: CCCGTTCTTAACGCATTCAACCAGTATGAGGCTGCATCTCCGGGAGAACAGGAATTGTACGTGTTCAACGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp CCTTTGTGTAGTATTCCGCTTTTCACATTGAGGGTGTaGTGTTTGTCCAGGGACCAGCCTCCAAGGTTGGAA +
Preference number: 6 (lower is better)
Translates to: PLCSIPLFTLRV*CLSRDQPPRLE
Trigger: TTCCAACCTTGGAGGCTGGTCCCTGGACAAACACCACACCCTCAATGTGAAAAGCGGAATACTACACAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 72 bp GCCATTGTTAAAGGTGTGTCCATCTGCCGGCTGGAGTaGCCAATTGAGTCCGAGCAGATGCATTGCTATGAA +
Preference number: 6 (lower is better)
Translates to: AIVKGVSICRLE*PIESEQMHCYE
Trigger: TTCATAGCAATGCATCTGCTCGGACTCAATTGGCAACTCCAGCCGGCAGATGGACACACCTTTAACAATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 72 bp CGTGGACAGTCCTGCACTGAATCTAAGACAACAGTGTaGAAGGAGACCATCTCCTTGTCCTTGCCGTCATTG +
Preference number: 6 (lower is better)
Translates to: RGQSCTESKTTV*KETISLSLPSL
Trigger: CAATGACGGCAAGGACAAGGAGATGGTCTCCTTCAACACTGTTGTCTTAGATTCAGTGCAGGACTGTCCACG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 72 bp GTGGACAGTCCTGCACTGAATCTAAGACAACAGTGTTaGAGGAGACCATCTCCTTGTCCTTGCCGTCATTGT +
Preference number: 6 (lower is better)
Translates to: VDSPALNLRQQC*RRPSPCPCRHC
Trigger: ACAATGACGGCAAGGACAAGGAGATGGTCTCCTTCAACACTGTTGTCTTAGATTCAGTGCAGGACTGTCCAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 72 bp TGGAGGCGATCGGAGGAGTCATATTCAAATATGTACTaGCGTTGGCTCTGTAGCAGAAGGACCATGGACTTG +
Preference number: 6 (lower is better)
Translates to: WRRSEESYSNMY*RWLCSRRTMDL
Trigger: CAAGTCCATGGTCCTTCTGCTACAGAGCCAACGTCAGTACATATTTGAATATGACTCCTCCGATCGCCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS GCA 72 bp CCATTGTTAAAGGTGTGTCCATCTGCCGGCTGGAGTTaGCAATTGAGTCCGAGCAGATGCATTGCTATGAAA +
Preference number: 6 (lower is better)
Translates to: PLLKVCPSAGWS*QLSPSRCIAMK
Trigger: TTTCATAGCAATGCATCTGCTCGGACTCAATTGGCAACTCCAGCCGGCAGATGGACACACCTTTAACAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp CGTGCCATCCTGGCGAGTGATGGTGTAGCCATATTTTaGGTACTTGACAAAAGACACATTCACACCCACCAA +
Preference number: 6 (lower is better)
Translates to: RAILASDGVAIF*VLDKRHIHTHQ
Trigger: TTGGTGGGTGTGAATGTGTCTTTTGTCAAGTACCCAAAATATGGCTACACCATCACTCGCCAGGATGGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 72 bp TTAAAGGTGTGTCCATCTGCCGGCTGGAGTTGCCAATaGAGTCCGAGCAGATGCATTGCTATGAAATATGCC +
Preference number: 6 (lower is better)
Translates to: LKVCPSAGWSCQ*SPSRCIAMKYA
Trigger: GGCATATTTCATAGCAATGCATCTGCTCGGACTCAATTGGCAACTCCAGCCGGCAGATGGACACACCTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 90 bp ACGCCATTGTTAAAGGTGTGTCCATCTGCCGGCTGGAGTTGCCAATaGAGTCCGAGCAGATGCATTGCTATGAAATATGCCAGCAAAATG +
Preference number: 6 (lower is better)
Translates to: TPLLKVCPSAGWSCQ*SPSRCIAMKYASKM
Trigger: CATTTTGCTGGCATATTTCATAGCAATGCATCTGCTCGGACTCAATTGGCAACTCCAGCCGGCAGATGGACACACCTTTAACAATGGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 72 bp TACAAGTACTCCCCAGTCACCAGACTCACAGTGTACTaGTGGATACCATCAGCGTTGAACACGTACAATTCC +
Preference number: 6 (lower is better)
Translates to: YKYSPVTRLTVY*WIPSALNTYNS
Trigger: GGAATTGTACGTGTTCAACGCTGATGGTATCCATCAGTACACTGTGAGTCTGGTGACTGGGGAGTACTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 72 bp ATGGGACGACCATTGTCGTCATCCGATTTATTTTCATaGTCAGAGTCAGTCAGAGTAAGGGCCGAGTTCTCG +
Preference number: 6 (lower is better)
Translates to: MGRPLSSSDLFS*SESVRVRAEFS
Trigger: CGAGAACTCGGCCCTTACTCTGACTGACTCTGACAATGAAAATAAATCGGATGACGACAATGGTCGTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 72 bp GAGAGGTTGGTGATCACAGTGACGTCATCATCCCGGTaGGAGTTCTCAATGTCAATGGTGATAGATTTCTCC +
Preference number: 6 (lower is better)
Translates to: ERLVITVTSSSR*EFSMSMVIDFS
Trigger: GGAGAAATCTATCACCATTGACATTGAGAACTCCAACCGGGATGATGACGTCACTGTGATCACCAACCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 72 bp TTTAAGTCCAGCTCATTGCTCAGAGGATTGTTGTTCTaGAACATGTACAGGTTGAAGGGGGCTGGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: FKSSSLLRGLLF*NMYRLKGAGSL
Trigger: CAAGGAGCCAGCCCCCTTCAACCTGTACATGTTCAAGAACAACAATCCTCTGAGCAATGAGCTGGACTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 90 bp ATCTTTAGGGAATTCCCGTTGTTGTCAATCAACTCGGTGACGTCATaGTCAGCGCTGTATGTGAAATTGTACAAGTACTCCCCAGTCACC +
Preference number: 6 (lower is better)
Translates to: IFREFPLLSINSVTS*SALYVKLYKYSPVT
Trigger: GGTGACTGGGGAGTACTTGTACAATTTCACATACAGCGCTGACAATGACGTCACCGAGTTGATTGACAACAACGGGAATTCCCTAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS TCA 72 bp TCTTTAGGATGCGGCCGTCATCACTGTAGTCAAAGATaGCTGATGCATTGCTTTCGGGTGGGTTGTAAATGT +
Preference number: 6 (lower is better)
Translates to: SLGCGRHHCSQR*LMHCFRVGCKC
Trigger: ACATTTACAACCCACCCGAAAGCAATGCATCAGTCATCTTTGACTACAGTGATGACGGCCGCATCCTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp ATATGTACTGACGTTGGCTCTGTAGCAGAAGGACCATaGACTTGTCAAGATAGGAATAGCTCCAGACTTTCC +
Preference number: 6 (lower is better)
Translates to: ICTDVGSVAEGP*TCQDRNSSRLS
Trigger: GGAAAGTCTGGAGCTATTCCTATCTTGACAAGTCCATGGTCCTTCTGCTACAGAGCCAACGTCAGTACATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CCA 72 bp TACAATTCCTGTTCTCCCGGAGATGCAGCCTCATACTaGTTGAATGCGTTAAGAACGGGTTTATTTTTGCTG +
Preference number: 6 (lower is better)
Translates to: YNSCSPGDAASY*LNALRTGLFLL
Trigger: CAGCAAAAATAAACCCGTTCTTAACGCATTCAACCAGTATGAGGCTGCATCTCCGGGAGAACAGGAATTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8
CDS CAA 72 bp GAATTCCCGTTGTTGTCAATCAACTCGGTGACGTCATaGTCAGCGCTGTATGTGAAATTGTACAAGTACTCC +
Preference number: 6 (lower is better)
Translates to: EFPLLSINSVTS*SALYVKLYKYS
Trigger: GGAGTACTTGTACAATTTCACATACAGCGCTGACAATGACGTCACCGAGTTGATTGACAACAACGGGAATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000057207.6
ENSMUST00000102801.8
ENSMUST00000163524.8