Pregenerated sensors for TEN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020778Ensembl transcript IDs: ENSMUST00000021130.7
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AAGCCACAGCGCCAGGGCCCTGGGGTAGGGAATCATATTCATTTTCATTCTTCTCTTCCCGCCTCTCCCTaGCTGCACTGGGATTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: KPQRQGPGVGNHIHFHSSLPASP*LHWDCS Trigger: GCTGCAATCCCAGTGCAGGCAGGGAGAGGCGGGAAG...AGAAGAATGAAAATGAATATGATTCCCTACCCCAGGGCCCTGGCGCTGTGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| 3UTR GCA 72 bp | CCACCTCTTCCCGCCTCTCCCTGCCTGCACTGGGATTaGAGCATGGGCCACTACGGCCAGATTGGGTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: PPLPASPCLHWD*SMGHYGQIGWA Trigger: AGCCCACCCAATCTGGCCGTAGTGGCCCATGCTGCAATCCCAGTGCAGGCAGGGAGAGGCGGGAAGAGGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| 3UTR GCA 72 bp | GGCTTTAAACTCCACCTCTTCCCGCCTCTCCCTGCCTaGACTGGGATTGCAGCATGGGCCACTACGGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: GFKLHLFPPLPA*TGIAAWATTAR Trigger: TCTGGCCGTAGTGGCCCATGCTGCAATCCCAGTGCAGGCAGGGAGAGGCGGGAAGAGGTGGAGTTTAAAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| 3UTR CCA 72 bp | CCTTCACATCCCTCACAAGCCACAGCGCCAGGGCCCTaGGGTAGGGAATCATATTCATTTTCATTCTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: PSHPSQATAPGP*GRESYSFSFFF Trigger: GAAGAAGAATGAAAATGAATATGATTCCCTACCCCAGGGCCCTGGCGCTGTGGCTTGTGAGGGATGTGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| CDS-3UTR TCA 90 bp | CCTCTTCCCGCCTCTCCCTGCCTGCACTGGGATTGCAGCATGGGCCACTACGGCTCCCCTCCACACAGGTaGGCAGTCGGGCCCTCACCA | + |
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Preference number: 4 (lower is better) Translates to: PLPASPCLHWDCSMGHYGSPPHR*AVGPSP Trigger: TGGTGAGGGCCCGACTGCTCACCTGTGTGGAGGGGA...GCCGTAGTGGCCCATGCTGCAATCCCAGTGCAGGCAGGGAGAGGCGGGAAGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| CDS-3UTR GCA 90 bp | CCGCCTCTCCCTGCCTGCACTGGGATTGCAGCATGGGCCACTACGGCCAGATTGGGTCATGAGGGAGCGTaGCATGTCATAGAGATACAA | + |
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Preference number: 4 (lower is better) Translates to: PPLPACTGIAAWATTARLGHEGA*HVIEIQ Trigger: TTGTATCTCTATGACATGGCACGCTCCCTCATGACC...CAATCTGGCCGTAGTGGCCCATGCTGCAATCCCAGTGCAGGCAGGGAGAGGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| CDS-3UTR CCA 90 bp | TATGTAGCTCAGACTGGCTTTAAACTCCACCTCTTCCCGCCTCTCCCTGCCTGCCTTCCTTCGGGGACATaGCCGTCACTGACCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: YVAQTGFKLHLFPPLPACLPSGT*PSLTSQ Trigger: CTGGGAGGTCAGTGACGGCCATGTCCCCGAAGGAAG...GCAGGCAGGGAGAGGCGGGAAGAGGTGGAGTTTAAAGCCAGTCTGAGCTACATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| CDS-3UTR TCA 90 bp | CTGGCTTTAAACTCCACCTCTTCCCGCCTCTCCCTGCCTGCACTGGGATTGCAGTCACTGGGAATCGATTaGGGAGCAGGTGTAGGGGTT | + |
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Preference number: 4 (lower is better) Translates to: LALNSTSSRLSLPALGLQSLGID*GAGVGV Trigger: AACCCCTACACCTGCTCCTCAATCGATTCCCAGTGA...CTGCAATCCCAGTGCAGGCAGGGAGAGGCGGGAAGAGGTGGAGTTTAAAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| CDS-3UTR CCA 90 bp | AAGCCACAGCGCCAGGGCCCTGGGGTAGGGAATCATATTCATTTTCATTCTTCTCTGCCCCCTGTTCTCTaGTTCCAGACTAAGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: KPQRQGPGVGNHIHFHSSLPPVL*FQTKAV Trigger: GACAGCCTTAGTCTGGAACCAGAGAACAGGGGGCAG...AGAAGAATGAAAATGAATATGATTCCCTACCCCAGGGCCCTGGCGCTGTGGCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| CDS-3UTR CCA 90 bp | AAGCCACAGCGCCAGGGCCCTGGGGTAGGGAATCATATTCATTTTCATTCTTCTAAGGCTCCACCAAGTTaGTGCAGACAAGCAGTTGAC | + |
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Preference number: 4 (lower is better) Translates to: KPQRQGPGVGNHIHFHSSKAPPS*CRQAVD Trigger: GTCAACTGCTTGTCTGCACCAACTTGGTGGAGCCTT...AGAAGAATGAAAATGAATATGATTCCCTACCCCAGGGCCCTGGCGCTGTGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| CDS-3UTR CCA 90 bp | TTGAGAGAGAGAGGGCATATGTGTTATGTAGCTCAGACTGGCTTTAAACTCCACGCTGGCGTCTCCTATTaGCTGCTGCCTCTTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: LRERGHMCYVAQTGFKLHAGVSY*LLPLLQ Trigger: CTGCAGAAGAGGCAGCAGCCAATAGGAGACGCCAGC...GTGGAGTTTAAAGCCAGTCTGAGCTACATAACACATATGCCCTCTCTCTCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| CDS-3UTR GCA 90 bp | CATATGTGTTATGTAGCTCAGACTGGCTTTAAACTCCACCTCTTCCCGCCTCTCGCTCCACCAAGTTGGTaGAGACAAGCAGTTGACACT | + |
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Preference number: 4 (lower is better) Translates to: HMCYVAQTGFKLHLFPPLAPPSW*RQAVDT Trigger: AGTGTCAACTGCTTGTCTGCACCAACTTGGTGGAGC...GAGAGGCGGGAAGAGGTGGAGTTTAAAGCCAGTCTGAGCTACATAACACATATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| CDS-3UTR CCA 90 bp | TCTTCTTTGAGAGAGAGAGGGCATATGTGTTATGTAGCTCAGACTGGCTTTAAAGCCTCTGCTCCAAGATaGCTTTCTCTAACAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: SSLRERGHMCYVAQTGFKASAPR*LSLTGT Trigger: TGTCCCTGTTAGAGAAAGCCATCTTGGAGCAGAGGC...TTTAAAGCCAGTCTGAGCTACATAACACATATGCCCTCTCTCTCTCAAAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| CDS-3UTR CAA 90 bp | CTGGCTTTAAACTCCACCTCTTCCCGCCTCTCCCTGCCTGCACTGGGATTGCAGGTCACTGGGAATCGATaGAGGAGCAGGTGTAGGGGT | + |
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Preference number: 5 (lower is better) Translates to: LALNSTSSRLSLPALGLQVTGNR*RSRCRG Trigger: ACCCCTACACCTGCTCCTCAATCGATTCCCAGTGAC...CTGCAATCCCAGTGCAGGCAGGGAGAGGCGGGAAGAGGTGGAGTTTAAAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| CDS TCA 90 bp | CAAGCAGTTGACACTGATCAGGTTTCTGCGGAGCTGCCAGGGTCATaGGGGAGCGTGCCATGTCATAGAGATACAACCTGCCAAATGTTC | + |
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Preference number: 5 (lower is better) Translates to: QAVDTDQVSAELPGS*GSVPCHRDTTCQMF Trigger: GAACATTTGGCAGGTTGTATCTCTATGACATGGCACGCTCCCTCATGACCCTGGCAGCTCCGCAGAAACCTGATCAGTGTCAACTGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| CDS GCA 90 bp | TGTACAGGAAGTTCACATGTGCCTCAAAAGGCTCCACCAAGTTGGTaGAGACAAGCAGTTGACACTGATCAGGTTTCTGCGGAGCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: CTGSSHVPQKAPPSW*RQAVDTDQVSAELP Trigger: TGGCAGCTCCGCAGAAACCTGATCAGTGTCAACTGCTTGTCTGCACCAACTTGGTGGAGCCTTTTGAGGCACATGTGAACTTCCTGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| CDS GCA 90 bp | CATTCGCTCCAGGTCCCCAAGAACCATGTACAGGAAGTTCACATGTaGCTCAAAAGGCTCCACCAAGTTGGTGCAGACAAGCAGTTGACA | + |
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Preference number: 5 (lower is better) Translates to: HSLQVPKNHVQEVHM*LKRLHQVGADKQLT Trigger: TGTCAACTGCTTGTCTGCACCAACTTGGTGGAGCCTTTTGAGGCACATGTGAACTTCCTGTACATGGTTCTTGGGGACCTGGAGCGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| CDS CCA 90 bp | CCATGTACAGGAAGTTCACATGTGCCTCAAAAGGCTCCACCAAGTTaGTGCAGACAAGCAGTTGACACTGATCAGGTTTCTGCGGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: PCTGSSHVPQKAPPS*CRQAVDTDQVSAEL Trigger: CAGCTCCGCAGAAACCTGATCAGTGTCAACTGCTTGTCTGCACCAACTTGGTGGAGCCTTTTGAGGCACATGTGAACTTCCTGTACATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| CDS-3UTR CAA 90 bp | ACAGCGCCAGGGCCCTGGGGTAGGGAATCATATTCATTTTCATTCTTCTTCTTCGGTGCAGACAAGCAGTaGACACTGATCAGGTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: TAPGPWGRESYSFSFFFFGADKQ*TLIRFL Trigger: CAGAAACCTGATCAGTGTCAACTGCTTGTCTGCACC...GAAGAAGAAGAATGAAAATGAATATGATTCCCTACCCCAGGGCCCTGGCGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| CDS CAA 90 bp | CACATGTGCCTCAAAAGGCTCCACCAAGTTGGTGCAGACAAGCAGTaGACACTGATCAGGTTTCTGCGGAGCTGCCAGGGTCATGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: HMCLKRLHQVGADKQ*TLIRFLRSCQGHEG Trigger: TCCCTCATGACCCTGGCAGCTCCGCAGAAACCTGATCAGTGTCAACTGCTTGTCTGCACCAACTTGGTGGAGCCTTTTGAGGCACATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| CDS CAA 72 bp | CTCAAAAGGCTCCACCAAGTTGGTGCAGACAAGCAGTaGACACTGATCAGGTTTCTGCGGAGCTGCCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: LKRLHQVGADKQ*TLIRFLRSCQG Trigger: ACCCTGGCAGCTCCGCAGAAACCTGATCAGTGTCAACTGCTTGTCTGCACCAACTTGGTGGAGCCTTTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| CDS GCA 72 bp | CAGGTCCCCAAGAACCATGTACAGGAAGTTCACATGTaGCTCAAAAGGCTCCACCAAGTTGGTGCAGACAAG | + |
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Preference number: 6 (lower is better) Translates to: QVPKNHVQEVHM*LKRLHQVGADK Trigger: CTTGTCTGCACCAACTTGGTGGAGCCTTTTGAGGCACATGTGAACTTCCTGTACATGGTTCTTGGGGACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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| CDS GCA 72 bp | AGTTCACATGTGCCTCAAAAGGCTCCACCAAGTTGGTaGAGACAAGCAGTTGACACTGATCAGGTTTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: SSHVPQKAPPSW*RQAVDTDQVSA Trigger: CGCAGAAACCTGATCAGTGTCAACTGCTTGTCTGCACCAACTTGGTGGAGCCTTTTGAGGCACATGTGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021130.7 |
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