Pregenerated sensors for TEKT5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039179Ensembl transcript IDs: ENSMUST00000043415.13, ENSMUST00000115831.2
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGGTGTAGCGACAGAAGAGCGCGGAGCGGAGCGAGGGCAGGATGGTaGGCGGCCGCCGGATGCCTGAGCATTCCTCGGGGATTGTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: GCSDRRARSGARAGW*AAAGCLSIPRGLSG Trigger: CCCAGACAATCCCCGAGGAATGCTCAGGCATCCGGCGGCCGCCCACCATCCTGCCCTCGCTCCGCTCCGCGCTCTTCTGTCGCTACACCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS TCA 90 bp | CGCGGAGCGGAGCGAGGGCAGGATGGTGGGCGGCCGCCGGATGCCTaGGCATTCCTCGGGGATTGTCTGGGAGGTGGCGATCTTGTGGAA | + |
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Preference number: 5 (lower is better) Translates to: RGAERGQDGGRPPDA*AFLGDCLGGGDLVE Trigger: TTCCACAAGATCGCCACCTCCCAGACAATCCCCGAGGAATGCTCAGGCATCCGGCGGCCGCCCACCATCCTGCCCTCGCTCCGCTCCGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS GCA 90 bp | AGAGCGCGGAGCGGAGCGAGGGCAGGATGGTGGGCGGCCGCCGGATaGCTGAGCATTCCTCGGGGATTGTCTGGGAGGTGGCGATCTTGT | + |
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Preference number: 5 (lower is better) Translates to: RARSGARAGWWAAAG*LSIPRGLSGRWRSC Trigger: ACAAGATCGCCACCTCCCAGACAATCCCCGAGGAATGCTCAGGCATCCGGCGGCCGCCCACCATCCTGCCCTCGCTCCGCTCCGCGCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CCA 90 bp | TTGGGGTGTAGCGACAGAAGAGCGCGGAGCGGAGCGAGGGCAGGATaGTGGGCGGCCGCCGGATGCCTGAGCATTCCTCGGGGATTGTCT | + |
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Preference number: 5 (lower is better) Translates to: LGCSDRRARSGARAG*WAAAGCLSIPRGLS Trigger: AGACAATCCCCGAGGAATGCTCAGGCATCCGGCGGCCGCCCACCATCCTGCCCTCGCTCCGCTCCGCGCTCTTCTGTCGCTACACCCCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS TCA 90 bp | CGCCTGTCAGCCGGCTGGCCCAGAGCCGCGAGGCCTCTGCATTCCTaGTCTGCAGATCATTGGAGCGGTCCCAGTCCCTTGGGGTGTAGC | + |
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Preference number: 5 (lower is better) Translates to: RLSAGWPRAARPLHS*SADHWSGPSPLGCS Trigger: GCTACACCCCAAGGGACTGGGACCGCTCCAATGATCTGCAGATCAGGAATGCAGAGGCCTCGCGGCTCTGGGCCAGCCGGCTGACAGGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS GCA 90 bp | CAGCGAGTCGCCTGTCAGCCGGCTGGCCCAGAGCCGCGAGGCCTCTaGATTCCTGATCTGCAGATCATTGGAGCGGTCCCAGTCCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: QRVACQPAGPEPRGL*IPDLQIIGAVPVPW Trigger: CCAAGGGACTGGGACCGCTCCAATGATCTGCAGATCAGGAATGCAGAGGCCTCGCGGCTCTGGGCCAGCCGGCTGACAGGCGACTCGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CCA 90 bp | ATGGTGGGCGGCCGCCGGATGCCTGAGCATTCCTCGGGGATTGTCTaGGAGGTGGCGATCTTGTGGAAGACGCTGGGTCTCCACGCGTTC | + |
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Preference number: 5 (lower is better) Translates to: MVGGRRMPEHSSGIV*EVAILWKTLGLHAF Trigger: GAACGCGTGGAGACCCAGCGTCTTCCACAAGATCGCCACCTCCCAGACAATCCCCGAGGAATGCTCAGGCATCCGGCGGCCGCCCACCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS TCA 90 bp | AGGTTCCCTCCTGCATCTGGTGTATCAGCTGGTCCTTATCCTGCATaGTCCGCAGCGAGTCGCCTGTCAGCCGGCTGGCCCAGAGCCGCG | + |
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Preference number: 5 (lower is better) Translates to: RFPPASGVSAGPYPA*SAASRLSAGWPRAA Trigger: CGCGGCTCTGGGCCAGCCGGCTGACAGGCGACTCGCTGCGGATCATGCAGGATAAGGACCAGCTGATACACCAGATGCAGGAGGGAACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS GCA 90 bp | CGGGAGGTTCCCTCCTGCATCTGGTGTATCAGCTGGTCCTTATCCTaGATGATCCGCAGCGAGTCGCCTGTCAGCCGGCTGGCCCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: REVPSCIWCISWSLS*MIRSESPVSRLAQS Trigger: GCTCTGGGCCAGCCGGCTGACAGGCGACTCGCTGCGGATCATGCAGGATAAGGACCAGCTGATACACCAGATGCAGGAGGGAACCTCCCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CCA 90 bp | TGGCCCAAGTTCCGGGAGGTTCCCTCCTGCATCTGGTGTATCAGCTaGTCCTTATCCTGCATGATCCGCAGCGAGTCGCCTGTCAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: WPKFREVPSCIWCIS*SLSCMIRSESPVSR Trigger: CCGGCTGACAGGCGACTCGCTGCGGATCATGCAGGATAAGGACCAGCTGATACACCAGATGCAGGAGGGAACCTCCCGGAACTTGGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS TCA 90 bp | GCAAGGGACAGTTCACCTCCTCAGCAGCGCACTCCAAGCGCCTCTTaGGGGTGTCCATGCTGCTGTTCTCCGTCAGAAGCCTGTCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: ARDSSPPQQRTPSAS*GCPCCCSPSEACPA Trigger: AGCTGGACAGGCTTCTGACGGAGAACAGCAGCATGGACACCCTCAAGAGGCGCTTGGAGTGCGCTGCTGAGGAGGTGAACTGTCCCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS GCA 90 bp | CCGAGGTCGGATAGCCTCTGGCCCAAGTTCCGGGAGGTTCCCTCCTaGATCTGGTGTATCAGCTGGTCCTTATCCTGCATGATCCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: PRSDSLWPKFREVPS*IWCISWSLSCMIRS Trigger: GCTGCGGATCATGCAGGATAAGGACCAGCTGATACACCAGATGCAGGAGGGAACCTCCCGGAACTTGGGCCAGAGGCTATCCGACCTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CCA 90 bp | ATTCCTCGGGGATTGTCTGGGAGGTGGCGATCTTGTGGAAGACGCTaGGTCTCCACGCGTTCAGGTAGCGGTATCCGGGCAGGTGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: IPRGLSGRWRSCGRR*VSTRSGSGIRAGER Trigger: CCTTTCACCTGCCCGGATACCGCTACCTGAACGCGTGGAGACCCAGCGTCTTCCACAAGATCGCCACCTCCCAGACAATCCCCGAGGAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CCA 90 bp | CCCTGCAGAGTTCCACATTGGGCCGTCGGGTCCTGCATGCTAGCATaGTCTGGGCCATCTTCAGTGGGTATTCCTTGGCCACAATGGCCC | + |
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Preference number: 5 (lower is better) Translates to: PCRVPHWAVGSCMLA*SGPSSVGIPWPQWP Trigger: GGGCCATTGTGGCCAAGGAATACCCACTGAAGATGGCCCAGACCATGCTAGCATGCAGGACCCGACGGCCCAATGTGGAACTCTGCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CCA 90 bp | TCGGATAGCCTCTGGCCCAAGTTCCGGGAGGTTCCCTCCTGCATCTaGTGTATCAGCTGGTCCTTATCCTGCATGATCCGCAGCGAGTCG | + |
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Preference number: 5 (lower is better) Translates to: SDSLWPKFREVPSCI*CISWSLSCMIRSES Trigger: CGACTCGCTGCGGATCATGCAGGATAAGGACCAGCTGATACACCAGATGCAGGAGGGAACCTCCCGGAACTTGGGCCAGAGGCTATCCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CCA 90 bp | CAGAGTTCCACATTGGGCCGTCGGGTCCTGCATGCTAGCATGGTCTaGGCCATCTTCAGTGGGTATTCCTTGGCCACAATGGCCCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: QSSTLGRRVLHASMV*AIFSGYSLATMALS Trigger: GGAGAGGGCCATTGTGGCCAAGGAATACCCACTGAAGATGGCCCAGACCATGCTAGCATGCAGGACCCGACGGCCCAATGTGGAACTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS GCA 90 bp | GAACTGCTTCCACATCTGGTCCGACAAGGTCTCAAACAGGTGCTCTaGCTCTTCCCGCAGCCGGATGGAGTTAGCCCGCATGTTCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: ELLPHLVRQGLKQVL*LFPQPDGVSPHVLS Trigger: GCTCAGAACATGCGGGCTAACTCCATCCGGCTGCGGGAAGAGGCAGAGCACCTGTTTGAGACCTTGTCGGACCAGATGTGGAAGCAGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS GCA 90 bp | ACTGTGGCACATCCCTGCAGAGTTCCACATTGGGCCGTCGGGTCCTaGATGCTAGCATGGTCTGGGCCATCTTCAGTGGGTATTCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: TVAHPCRVPHWAVGS*MLAWSGPSSVGIPW Trigger: CCAAGGAATACCCACTGAAGATGGCCCAGACCATGCTAGCATGCAGGACCCGACGGCCCAATGTGGAACTCTGCAGGGATGTGCCACAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS GCA 90 bp | GGCCTGAACCGATGGCAGAGCAGGTGTAGCCAGTCAGGCGGGGTGTaGTGGGGAAGGATTTGCGCATGCTCATGCATTTGTCCTTGTCAA | + |
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Preference number: 5 (lower is better) Translates to: GLNRWQSRCSQSGGV*WGRICACSCICPCQ Trigger: TTGACAAGGACAAATGCATGAGCATGCGCAAATCCTTCCCCAGCACACCCCGCCTGACTGGCTACACCTGCTCTGCCATCGGTTCAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043415.13 |
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| CDS GCA 90 bp | TTGGTGAACTGCTTCCACATCTGGTCCGACAAGGTCTCAAACAGGTaGTCTGCCTCTTCCCGCAGCCGGATGGAGTTAGCCCGCATGTTC | + |
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Preference number: 5 (lower is better) Translates to: LVNCFHIWSDKVSNR*SASSRSRMELARMF Trigger: GAACATGCGGGCTAACTCCATCCGGCTGCGGGAAGAGGCAGAGCACCTGTTTGAGACCTTGTCGGACCAGATGTGGAAGCAGTTCACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CCA 90 bp | CTGAACCGATGGCAGAGCAGGTGTAGCCAGTCAGGCGGGGTGTGCTaGGGAAGGATTTGCGCATGCTCATGCATTTGTCCTTGTCAATAC | + |
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Preference number: 5 (lower is better) Translates to: LNRWQSRCSQSGGVC*GRICACSCICPCQY Trigger: GTATTGACAAGGACAAATGCATGAGCATGCGCAAATCCTTCCCCAGCACACCCCGCCTGACTGGCTACACCTGCTCTGCCATCGGTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043415.13 |
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| CDS TCA 90 bp | TGCTCTGCCTCTTCCCGCAGCCGGATGGAGTTAGCCCGCATGTTCTaGGCATGTCTGATGTTGTCATTGCTGAACTTGGCCCAGGTTTCA | + |
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Preference number: 5 (lower is better) Translates to: CSASSRSRMELARMF*ACLMLSLLNLAQVS Trigger: TGAAACCTGGGCCAAGTTCAGCAATGACAACATCAGACATGCTCAGAACATGCGGGCTAACTCCATCCGGCTGCGGGAAGAGGCAGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS GCA 90 bp | TCCTCAGAGATGCGAGCGTTGAAGGCTAGGTTGGTGTTGGTGAACTaGTTCCACATCTGGTCCGACAAGGTCTCAAACAGGTGCTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: SSEMRALKARLVLVN*FHIWSDKVSNRCSA Trigger: GGCAGAGCACCTGTTTGAGACCTTGTCGGACCAGATGTGGAAGCAGTTCACCAACACCAACCTAGCCTTCAACGCTCGCATCTCTGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS GCA 90 bp | CAGAGCAGGTGTAGCCAGTCAGGCGGGGTGTGCTGGGGAAGGATTTaGGCATGCTCATGCATTTGTCCTTGTCAATACACAAGGTGTTGG | + |
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Preference number: 5 (lower is better) Translates to: QSRCSQSGGVCWGRI*ACSCICPCQYTRCW Trigger: CCAACACCTTGTGTATTGACAAGGACAAATGCATGAGCATGCGCAAATCCTTCCCCAGCACACCCCGCCTGACTGGCTACACCTGCTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043415.13 |
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| CDS GCA 90 bp | TTGTCCTTGTCAATACACAAGGTGTTGGCTTTGATGGCCAGCTCGTaGTCCAGACGGGACTTGGTCATCACCAGCAGCTGCAACGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: LSLSIHKVLALMASS*SRRDLVITSSCNVS Trigger: AGACACGTTGCAGCTGCTGGTGATGACCAAGTCCCGTCTGGAGCACGAGCTGGCCATCAAAGCCAACACCTTGTGTATTGACAAGGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043415.13 |
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| CDS GCA 90 bp | TTTTCTGCCTGGAAGATCTCCTGCAGTATCTTAGCCAGCTGTGTCTaGAGCTTGTTCTTCACATCTGTCTCCTCAGAGATGCGAGCGTTG | + |
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Preference number: 5 (lower is better) Translates to: FSAWKISCSILASCV*SLFFTSVSSEMRAL Trigger: CAACGCTCGCATCTCTGAGGAGACAGATGTGAAGAACAAGCTGCAGACACAGCTGGCTAAGATACTGCAGGAGATCTTCCAGGCAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CCA 90 bp | CAGGTTTCAGGAATGGAGACCGTTCCGTCAAACTTCTCCACGCCGTaGAAGAAGCTGATGGAGTCAGACGTGCTTCTTAGGTTAAAACAA | + |
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Preference number: 5 (lower is better) Translates to: QVSGMETVPSNFSTP*KKLMESDVLLRLKQ Trigger: TTGTTTTAACCTAAGAAGCACGTCTGACTCCATCAGCTTCTTCCACGGCGTGGAGAAGTTTGACGGAACGGTCTCCATTCCTGAAACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS TCA 90 bp | TACTGTGCAGAGCTCTTGTCTTCAATATCCCGCTCTAGGGAGTGCTaGGCATCCCGGTTATCTCGAATCTGGAAATCAATTCGTTTAGCT | + |
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Preference number: 5 (lower is better) Translates to: YCAELLSSISRSREC*ASRLSRIWKSIRLA Trigger: AGCTAAACGAATTGATTTCCAGATTCGAGATAACCGGGATGCTCAGCACTCCCTAGAGCGGGATATTGAAGACAAGAGCTCTGCACAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CCA 90 bp | TTTAGTAAATCTACTTCCCGGATAAGGTTTTTCTCCACGTTGTCATaGACCAGGTCAATCCCGATCCTTTTCTCCCGATTGTACAGACAC | + |
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Preference number: 5 (lower is better) Translates to: FSKSTSRIRFFSTLS*TRSIPILFSRLYRH Trigger: GTGTCTGTACAATCGGGAGAAAAGGATCGGGATTGACCTGGTCCATGACAACGTGGAGAAAAACCTTATCCGGGAAGTAGATTTACTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS TCA 72 bp | GAGCGAGGGCAGGATGGTGGGCGGCCGCCGGATGCCTaGGCATTCCTCGGGGATTGTCTGGGAGGTGGCGAT | + |
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Preference number: 6 (lower is better) Translates to: ERGQDGGRPPDA*AFLGDCLGGGD Trigger: ATCGCCACCTCCCAGACAATCCCCGAGGAATGCTCAGGCATCCGGCGGCCGCCCACCATCCTGCCCTCGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CAA 90 bp | GCAGGATGGTGGGCGGCCGCCGGATGCCTGAGCATTCCTCGGGGATaGTCTGGGAGGTGGCGATCTTGTGGAAGACGCTGGGTCTCCACG | + |
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Preference number: 6 (lower is better) Translates to: AGWWAAAGCLSIPRG*SGRWRSCGRRWVST Trigger: CGTGGAGACCCAGCGTCTTCCACAAGATCGCCACCTCCCAGACAATCCCCGAGGAATGCTCAGGCATCCGGCGGCCGCCCACCATCCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS TCA 72 bp | GCCGGCTGGCCCAGAGCCGCGAGGCCTCTGCATTCCTaGTCTGCAGATCATTGGAGCGGTCCCAGTCCCTTG | + |
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Preference number: 6 (lower is better) Translates to: AGWPRAARPLHS*SADHWSGPSPL Trigger: CAAGGGACTGGGACCGCTCCAATGATCTGCAGATCAGGAATGCAGAGGCCTCGCGGCTCTGGGCCAGCCGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS GCA 72 bp | GCCTGTCAGCCGGCTGGCCCAGAGCCGCGAGGCCTCTaGATTCCTGATCTGCAGATCATTGGAGCGGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: ACQPAGPEPRGL*IPDLQIIGAVP Trigger: TGGGACCGCTCCAATGATCTGCAGATCAGGAATGCAGAGGCCTCGCGGCTCTGGGCCAGCCGGCTGACAGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS TCA 72 bp | GGAGCTGATACGAGGGGCGTGGTTGGCGTAAGGGCCTaGACCGATGGCAGAGCAGGTGTAGCCAGTCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: GADTRGVVGVRA*TDGRAGVASQA Trigger: CGCCTGACTGGCTACACCTGCTCTGCCATCGGTTCAGGCCCTTACGCCAACCACGCCCCTCGTATCAGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043415.13 |
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| CDS GCA 72 bp | CTGGCCCAGAGCCGCGAGGCCTCTGCATTCCTGATCTaGAGATCATTGGAGCGGTCCCAGTCCCTTGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: LAQSREASAFLI*RSLERSQSLGV Trigger: CACCCCAAGGGACTGGGACCGCTCCAATGATCTGCAGATCAGGAATGCAGAGGCCTCGCGGCTCTGGGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CCA 72 bp | GGCCGCCGGATGCCTGAGCATTCCTCGGGGATTGTCTaGGAGGTGGCGATCTTGTGGAAGACGCTGGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: GRRMPEHSSGIV*EVAILWKTLGL Trigger: GAGACCCAGCGTCTTCCACAAGATCGCCACCTCCCAGACAATCCCCGAGGAATGCTCAGGCATCCGGCGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CAA 90 bp | GGGTCTCCACGCGTTCAGGTAGCGGTATCCGGGCAGGTGAAAGGGTaGGTAGCACTCCTGTACCACAGGTTCCTGCCCAGCAGGGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: GSPRVQVAVSGQVKG*VALLYHRFLPSRGQ Trigger: CTGCCCCCTGCTGGGCAGGAACCTGTGGTACAGGAGTGCTACCAACCCTTTCACCTGCCCGGATACCGCTACCTGAACGCGTGGAGACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS TCA 72 bp | CCTGCATCTGGTGTATCAGCTGGTCCTTATCCTGCATaGTCCGCAGCGAGTCGCCTGTCAGCCGGCTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: PASGVSAGPYPA*SAASRLSAGWP Trigger: GGGCCAGCCGGCTGACAGGCGACTCGCTGCGGATCATGCAGGATAAGGACCAGCTGATACACCAGATGCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS GCA 72 bp | TGTACCACAGGTTCCTGCCCAGCAGGGGGCAGCGCCTaGAAGCCACAGCCTTTCTTGGGGCCACAGAAACTC | + |
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Preference number: 6 (lower is better) Translates to: CTTGSCPAGGSA*KPQPFLGPQKL Trigger: GAGTTTCTGTGGCCCCAAGAAAGGCTGTGGCTTGCAGGCGCTGCCCCCTGCTGGGCAGGAACCTGTGGTACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS GCA 72 bp | CCCTCCTGCATCTGGTGTATCAGCTGGTCCTTATCCTaGATGATCCGCAGCGAGTCGCCTGTCAGCCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: PSCIWCISWSLS*MIRSESPVSRL Trigger: CAGCCGGCTGACAGGCGACTCGCTGCGGATCATGCAGGATAAGGACCAGCTGATACACCAGATGCAGGAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CCA 72 bp | GGATTGTCTGGGAGGTGGCGATCTTGTGGAAGACGCTaGGTCTCCACGCGTTCAGGTAGCGGTATCCGGGCA | + |
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Preference number: 6 (lower is better) Translates to: GLSGRWRSCGRR*VSTRSGSGIRA Trigger: TGCCCGGATACCGCTACCTGAACGCGTGGAGACCCAGCGTCTTCCACAAGATCGCCACCTCCCAGACAATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CAA 72 bp | CGCGTTCAGGTAGCGGTATCCGGGCAGGTGAAAGGGTaGGTAGCACTCCTGTACCACAGGTTCCTGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RVQVAVSGQVKG*VALLYHRFLPS Trigger: GCTGGGCAGGAACCTGTGGTACAGGAGTGCTACCAACCCTTTCACCTGCCCGGATACCGCTACCTGAACGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CAA 90 bp | TGCAAGGGACAGTTCACCTCCTCAGCAGCGCACTCCAAGCGCCTCTaGAGGGTGTCCATGCTGCTGTTCTCCGTCAGAAGCCTGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: CKGQFTSSAAHSKRL*RVSMLLFSVRSLSS Trigger: GCTGGACAGGCTTCTGACGGAGAACAGCAGCATGGACACCCTCAAGAGGCGCTTGGAGTGCGCTGCTGAGGAGGTGAACTGTCCCTTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS GCA 72 bp | CCACATCTGGTCCGACAAGGTCTCAAACAGGTGCTCTaGCTCTTCCCGCAGCCGGATGGAGTTAGCCCGCAT | + |
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Preference number: 6 (lower is better) Translates to: PHLVRQGLKQVL*LFPQPDGVSPH Trigger: ATGCGGGCTAACTCCATCCGGCTGCGGGAAGAGGCAGAGCACCTGTTTGAGACCTTGTCGGACCAGATGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS GCA 72 bp | CATCCCTGCAGAGTTCCACATTGGGCCGTCGGGTCCTaGATGCTAGCATGGTCTGGGCCATCTTCAGTGGGT | + |
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Preference number: 6 (lower is better) Translates to: HPCRVPHWAVGS*MLAWSGPSSVG Trigger: ACCCACTGAAGATGGCCCAGACCATGCTAGCATGCAGGACCCGACGGCCCAATGTGGAACTCTGCAGGGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS GCA 72 bp | TCGTGCTCCAGACGGGACTTGGTCATCACCAGCAGCTaGAACGTGTCTTGCGTCTCCCGAAGCCTCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SCSRRDLVITSS*NVSCVSRSLSL Trigger: CAAGCTGAGGCTTCGGGAGACGCAAGACACGTTGCAGCTGCTGGTGATGACCAAGTCCCGTCTGGAGCACGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043415.13 |
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| CDS CCA 72 bp | AACTCGGACTTCCAGAAACCGAGGTCGGATAGCCTCTaGCCCAAGTTCCGGGAGGTTCCCTCCTGCATCTGG | + |
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Preference number: 6 (lower is better) Translates to: NSDFQKPRSDSL*PKFREVPSCIW Trigger: CCAGATGCAGGAGGGAACCTCCCGGAACTTGGGCCAGAGGCTATCCGACCTCGGTTTCTGGAAGTCCGAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CAA 72 bp | CAGTTCACCTCCTCAGCAGCGCACTCCAAGCGCCTCTaGAGGGTGTCCATGCTGCTGTTCTCCGTCAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: QFTSSAAHSKRL*RVSMLLFSVRS Trigger: GCTTCTGACGGAGAACAGCAGCATGGACACCCTCAAGAGGCGCTTGGAGTGCGCTGCTGAGGAGGTGAACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CAA 90 bp | CACAAGGTGTTGGCTTTGATGGCCAGCTCGTGCTCCAGACGGGACTaGGTCATCACCAGCAGCTGCAACGTGTCTTGCGTCTCCCGAAGC | + |
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Preference number: 6 (lower is better) Translates to: HKVLALMASSCSRRD*VITSSCNVSCVSRS Trigger: GCTTCGGGAGACGCAAGACACGTTGCAGCTGCTGGTGATGACCAAGTCCCGTCTGGAGCACGAGCTGGCCATCAAAGCCAACACCTTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043415.13 |
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| CDS CAA 90 bp | TCATTCACGAGCCTGAACTGTGGCACATCCCTGCAGAGTTCCACATaGGGCCGTCGGGTCCTGCATGCTAGCATGGTCTGGGCCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: SFTSLNCGTSLQSST*GRRVLHASMVWAIF Trigger: GAAGATGGCCCAGACCATGCTAGCATGCAGGACCCGACGGCCCAATGTGGAACTCTGCAGGGATGTGCCACAGTTCAGGCTCGTGAATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043415.13 |
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| CDS GCA 72 bp | TGCTTCCACATCTGGTCCGACAAGGTCTCAAACAGGTaGTCTGCCTCTTCCCGCAGCCGGATGGAGTTAGCC | + |
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Preference number: 6 (lower is better) Translates to: CFHIWSDKVSNR*SASSRSRMELA Trigger: GGCTAACTCCATCCGGCTGCGGGAAGAGGCAGAGCACCTGTTTGAGACCTTGTCGGACCAGATGTGGAAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS GCA 72 bp | CGATGGCAGAGCAGGTGTAGCCAGTCAGGCGGGGTGTaGTGGGGAAGGATTTGCGCATGCTCATGCATTTGT | + |
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Preference number: 6 (lower is better) Translates to: RWQSRCSQSGGV*WGRICACSCIC Trigger: ACAAATGCATGAGCATGCGCAAATCCTTCCCCAGCACACCCCGCCTGACTGGCTACACCTGCTCTGCCATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043415.13 |
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| CDS CCA 72 bp | TTCCGGGAGGTTCCCTCCTGCATCTGGTGTATCAGCTaGTCCTTATCCTGCATGATCCGCAGCGAGTCGCCT | + |
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Preference number: 6 (lower is better) Translates to: FREVPSCIWCIS*SLSCMIRSESP Trigger: AGGCGACTCGCTGCGGATCATGCAGGATAAGGACCAGCTGATACACCAGATGCAGGAGGGAACCTCCCGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CCA 72 bp | CTCTGGCCCAAGTTCCGGGAGGTTCCCTCCTGCATCTaGTGTATCAGCTGGTCCTTATCCTGCATGATCCGC | + |
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Preference number: 6 (lower is better) Translates to: LWPKFREVPSCI*CISWSLSCMIR Trigger: GCGGATCATGCAGGATAAGGACCAGCTGATACACCAGATGCAGGAGGGAACCTCCCGGAACTTGGGCCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CCA 72 bp | GTTCCACATTGGGCCGTCGGGTCCTGCATGCTAGCATaGTCTGGGCCATCTTCAGTGGGTATTCCTTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VPHWAVGSCMLA*SGPSSVGIPWP Trigger: TGGCCAAGGAATACCCACTGAAGATGGCCCAGACCATGCTAGCATGCAGGACCCGACGGCCCAATGTGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CCA 72 bp | TGGCAGAGCAGGTGTAGCCAGTCAGGCGGGGTGTGCTaGGGAAGGATTTGCGCATGCTCATGCATTTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: WQSRCSQSGGVC*GRICACSCICP Trigger: AGGACAAATGCATGAGCATGCGCAAATCCTTCCCCAGCACACCCCGCCTGACTGGCTACACCTGCTCTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043415.13 |
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| CDS CAA 72 bp | TTGGCTTTGATGGCCAGCTCGTGCTCCAGACGGGACTaGGTCATCACCAGCAGCTGCAACGTGTCTTGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: LALMASSCSRRD*VITSSCNVSCV Trigger: GACGCAAGACACGTTGCAGCTGCTGGTGATGACCAAGTCCCGTCTGGAGCACGAGCTGGCCATCAAAGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043415.13 |
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| CDS GCA 72 bp | GATAGCCTCTGGCCCAAGTTCCGGGAGGTTCCCTCCTaGATCTGGTGTATCAGCTGGTCCTTATCCTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: DSLWPKFREVPS*IWCISWSLSCM Trigger: CATGCAGGATAAGGACCAGCTGATACACCAGATGCAGGAGGGAACCTCCCGGAACTTGGGCCAGAGGCTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CAA 90 bp | TCCACGTTGTCATGGACCAGGTCAATCCCGATCCTTTTCTCCCGATaGTACAGACACTCCAGGGCCACCTGCAAGGGACAGTTCACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: STLSWTRSIPILFSR*YRHSRATCKGQFTS Trigger: GGAGGTGAACTGTCCCTTGCAGGTGGCCCTGGAGTGTCTGTACAATCGGGAGAAAAGGATCGGGATTGACCTGGTCCATGACAACGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS GCA 72 bp | TCAATACACAAGGTGTTGGCTTTGATGGCCAGCTCGTaGTCCAGACGGGACTTGGTCATCACCAGCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SIHKVLALMASS*SRRDLVITSSC Trigger: GCAGCTGCTGGTGATGACCAAGTCCCGTCTGGAGCACGAGCTGGCCATCAAAGCCAACACCTTGTGTATTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043415.13 |
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| CDS CCA 72 bp | GTCTATGGTGAAGACCTCATTCACGAGCCTGAACTGTaGCACATCCCTGCAGAGTTCCACATTGGGCCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: VYGEDLIHEPEL*HIPAEFHIGPS Trigger: CGACGGCCCAATGTGGAACTCTGCAGGGATGTGCCACAGTTCAGGCTCGTGAATGAGGTCTTCACCATAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043415.13 |
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| CDS CAA 72 bp | TCATGGACCAGGTCAATCCCGATCCTTTTCTCCCGATaGTACAGACACTCCAGGGCCACCTGCAAGGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: SWTRSIPILFSR*YRHSRATCKGQ Trigger: CTGTCCCTTGCAGGTGGCCCTGGAGTGTCTGTACAATCGGGAGAAAAGGATCGGGATTGACCTGGTCCATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CAA 72 bp | GCTAGCATGGTCTGGGCCATCTTCAGTGGGTATTCCTaGGCCACAATGGCCCTCTCCAGCAACATGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ASMVWAIFSGYS*ATMALSSNMMV Trigger: CACCATCATGTTGCTGGAGAGGGCCATTGTGGCCAAGGAATACCCACTGAAGATGGCCCAGACCATGCTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CAA 90 bp | GTCCTGCATGCTAGCATGGTCTGGGCCATCTTCAGTGGGTATTCCTaGGCCACAATGGCCCTCTCCAGCAACATGATGGTGTTTTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VLHASMVWAIFSGYS*ATMALSSNMMVFSA Trigger: GGCAGAAAACACCATCATGTTGCTGGAGAGGGCCATTGTGGCCAAGGAATACCCACTGAAGATGGCCCAGACCATGCTAGCATGCAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CAA 90 bp | ATCACCAGCAGCTGCAACGTGTCTTGCGTCTCCCGAAGCCTCAGCTaGAGCGTCTGTAGAGTGTCGTCTATGGTGAAGACCTCATTCACG | + |
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Preference number: 6 (lower is better) Translates to: ITSSCNVSCVSRSLS*SVCRVSSMVKTSFT Trigger: CGTGAATGAGGTCTTCACCATAGACGACACTCTACAGACGCTCAAGCTGAGGCTTCGGGAGACGCAAGACACGTTGCAGCTGCTGGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043415.13 |
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| CDS CAA 90 bp | GTCAGGCGGGGTGTGCTGGGGAAGGATTTGCGCATGCTCATGCATTaGTCCTTGTCAATACACAAGGTGTTGGCTTTGATGGCCAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: VRRGVLGKDLRMLMH*SLSIHKVLALMASS Trigger: CGAGCTGGCCATCAAAGCCAACACCTTGTGTATTGACAAGGACAAATGCATGAGCATGCGCAAATCCTTCCCCAGCACACCCCGCCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043415.13 |
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| CDS TCA 72 bp | TCTTCCCGCAGCCGGATGGAGTTAGCCCGCATGTTCTaGGCATGTCTGATGTTGTCATTGCTGAACTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: SSRSRMELARMF*ACLMLSLLNLA Trigger: GGCCAAGTTCAGCAATGACAACATCAGACATGCTCAGAACATGCGGGCTAACTCCATCCGGCTGCGGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CAA 72 bp | TCCTCAGAGATGCGAGCGTTGAAGGCTAGGTTGGTGTaGGTGAACTGCTTCCACATCTGGTCCGACAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: SSEMRALKARLV*VNCFHIWSDKV Trigger: GACCTTGTCGGACCAGATGTGGAAGCAGTTCACCAACACCAACCTAGCCTTCAACGCTCGCATCTCTGAGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CAA 72 bp | TCTGTCTCCTCAGAGATGCGAGCGTTGAAGGCTAGGTaGGTGTTGGTGAACTGCTTCCACATCTGGTCCGAC | + |
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Preference number: 6 (lower is better) Translates to: SVSSEMRALKAR*VLVNCFHIWSD Trigger: GTCGGACCAGATGTGGAAGCAGTTCACCAACACCAACCTAGCCTTCAACGCTCGCATCTCTGAGGAGACAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS GCA 72 bp | ATGCGAGCGTTGAAGGCTAGGTTGGTGTTGGTGAACTaGTTCCACATCTGGTCCGACAAGGTCTCAAACAGG | + |
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Preference number: 6 (lower is better) Translates to: MRALKARLVLVN*FHIWSDKVSNR Trigger: CCTGTTTGAGACCTTGTCGGACCAGATGTGGAAGCAGTTCACCAACACCAACCTAGCCTTCAACGCTCGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS GCA 72 bp | GGCGGGGTGTGCTGGGGAAGGATTTGCGCATGCTCATaGATTTGTCCTTGTCAATACACAAGGTGTTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: GGVCWGRICACS*ICPCQYTRCWL Trigger: AAGCCAACACCTTGTGTATTGACAAGGACAAATGCATGAGCATGCGCAAATCCTTCCCCAGCACACCCCGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043415.13 |
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| CDS GCA 72 bp | CAGTCAGGCGGGGTGTGCTGGGGAAGGATTTGCGCATaGTCATGCATTTGTCCTTGTCAATACACAAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: QSGGVCWGRICA*SCICPCQYTRC Trigger: ACACCTTGTGTATTGACAAGGACAAATGCATGAGCATGCGCAAATCCTTCCCCAGCACACCCCGCCTGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043415.13 |
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| CDS CCA 72 bp | AAGGCTAGGTTGGTGTTGGTGAACTGCTTCCACATCTaGTCCGACAAGGTCTCAAACAGGTGCTCTGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: KARLVLVNCFHI*SDKVSNRCSAS Trigger: AGAGGCAGAGCACCTGTTTGAGACCTTGTCGGACCAGATGTGGAAGCAGTTCACCAACACCAACCTAGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CAA 90 bp | ACATCTGTCTCCTCAGAGATGCGAGCGTTGAAGGCTAGGTTGGTGTaGGTGAACTGCTTCCACATCTGGTCCGACAAGGTCTCAAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: TSVSSEMRALKARLV*VNCFHIWSDKVSNR Trigger: CCTGTTTGAGACCTTGTCGGACCAGATGTGGAAGCAGTTCACCAACACCAACCTAGCCTTCAACGCTCGCATCTCTGAGGAGACAGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CAA 90 bp | GTCTGCAGCTTGTTCTTCACATCTGTCTCCTCAGAGATGCGAGCGTaGAAGGCTAGGTTGGTGTTGGTGAACTGCTTCCACATCTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VCSLFFTSVSSEMRA*KARLVLVNCFHIWS Trigger: GGACCAGATGTGGAAGCAGTTCACCAACACCAACCTAGCCTTCAACGCTCGCATCTCTGAGGAGACAGATGTGAAGAACAAGCTGCAGAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CAA 90 bp | GCCTGGAAGATCTCCTGCAGTATCTTAGCCAGCTGTGTCTGCAGCTaGTTCTTCACATCTGTCTCCTCAGAGATGCGAGCGTTGAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AWKISCSILASCVCS*FFTSVSSEMRALKA Trigger: AGCCTTCAACGCTCGCATCTCTGAGGAGACAGATGTGAAGAACAAGCTGCAGACACAGCTGGCTAAGATACTGCAGGAGATCTTCCAGGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CAA 90 bp | TTCTTCACATCTGTCTCCTCAGAGATGCGAGCGTTGAAGGCTAGGTaGGTGTTGGTGAACTGCTTCCACATCTGGTCCGACAAGGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FFTSVSSEMRALKAR*VLVNCFHIWSDKVS Trigger: TGAGACCTTGTCGGACCAGATGTGGAAGCAGTTCACCAACACCAACCTAGCCTTCAACGCTCGCATCTCTGAGGAGACAGATGTGAAGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS GCA 72 bp | CACAATGGCCCTCTCCAGCAACATGATGGTGTTTTCTaGCTGGAAGATCTCCTGCAGTATCTTAGCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HNGPLQQHDGVF*LEDLLQYLSQL Trigger: CAGCTGGCTAAGATACTGCAGGAGATCTTCCAGGCAGAAAACACCATCATGTTGCTGGAGAGGGCCATTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CAA 72 bp | ATGCATTTGTCCTTGTCAATACACAAGGTGTTGGCTTaGATGGCCAGCTCGTGCTCCAGACGGGACTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: MHLSLSIHKVLA*MASSCSRRDLV Trigger: GACCAAGTCCCGTCTGGAGCACGAGCTGGCCATCAAAGCCAACACCTTGTGTATTGACAAGGACAAATGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043415.13 |
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| CDS CAA 72 bp | TTGTTCTTCACATCTGTCTCCTCAGAGATGCGAGCGTaGAAGGCTAGGTTGGTGTTGGTGAACTGCTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LFFTSVSSEMRA*KARLVLVNCFH Trigger: GTGGAAGCAGTTCACCAACACCAACCTAGCCTTCAACGCTCGCATCTCTGAGGAGACAGATGTGAAGAACAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CAA 72 bp | CTGGGGAAGGATTTGCGCATGCTCATGCATTTGTCCTaGTCAATACACAAGGTGTTGGCTTTGATGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LGKDLRMLMHLS*SIHKVLALMAS Trigger: GCTGGCCATCAAAGCCAACACCTTGTGTATTGACAAGGACAAATGCATGAGCATGCGCAAATCCTTCCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043415.13 |
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| CDS CCA 72 bp | TCTACTTCCCGGATAAGGTTTTTCTCCACGTTGTCATaGACCAGGTCAATCCCGATCCTTTTCTCCCGATTG | + |
|
Preference number: 6 (lower is better) Translates to: STSRIRFFSTLS*TRSIPILFSRL Trigger: CAATCGGGAGAAAAGGATCGGGATTGACCTGGTCCATGACAACGTGGAGAAAAACCTTATCCGGGAAGTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS TCA 72 bp | GAGCTCTTGTCTTCAATATCCCGCTCTAGGGAGTGCTaGGCATCCCGGTTATCTCGAATCTGGAAATCAATT | + |
|
Preference number: 6 (lower is better) Translates to: ELLSSISRSREC*ASRLSRIWKSI Trigger: AATTGATTTCCAGATTCGAGATAACCGGGATGCTCAGCACTCCCTAGAGCGGGATATTGAAGACAAGAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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| CDS CAA 72 bp | AGTAAATCTACTTCCCGGATAAGGTTTTTCTCCACGTaGTCATGGACCAGGTCAATCCCGATCCTTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SKSTSRIRFFST*SWTRSIPILFS Trigger: GGAGAAAAGGATCGGGATTGACCTGGTCCATGACAACGTGGAGAAAAACCTTATCCGGGAAGTAGATTTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043415.13 ENSMUST00000115831.2 |
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