Pregenerated sensors for TEDDM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045968Ensembl transcript IDs: ENSMUST00000059607.8, ENSMUST00000123490.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAAGCGGTACAGGCCAAGCAGGTGCTGCGACTGGAGGTGGGGATTaGAGAGGCTTGTCAGGGGCTAAGAGAGGGAAGGTCATAGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: QSGTGQAGAATGGGD*RGLSGAKRGKVIAV Trigger: CACAGCTATGACCTTCCCTCTCTTAGCCCCTGACAAGCCTCTCCAATCCCCACCTCCAGTCGCAGCACCTGCTTGGCCTGTACCGCTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR TCA 90 bp | TTTGGAAACTTTACTGAGATGAGTCCAGACAATGGGCTGAGAGACTaGGGAGGAGAACATGACCCTGAGGCCTTGATCCGTGTGCAGGGG | + |
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Preference number: 1 (lower is better) Translates to: FGNFTEMSPDNGLRD*GGEHDPEALIRVQG Trigger: CCCCTGCACACGGATCAAGGCCTCAGGGTCATGTTCTCCTCCTCAGTCTCTCAGCCCATTGTCTGGACTCATCTCAGTAAAGTTTCCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR TCA 90 bp | CTGAGAGGTCTGGGGCTGGGCAAGTCTACTATTTGGAAACTTTACTaGGATGAGTCCAGACAATGGGCTGAGAGACTGAGGAGGAGAACA | + |
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Preference number: 1 (lower is better) Translates to: LRGLGLGKSTIWKLY*DESRQWAERLRRRT Trigger: TGTTCTCCTCCTCAGTCTCTCAGCCCATTGTCTGGACTCATCTCAGTAAAGTTTCCAAATAGTAGACTTGCCCAGCCCCAGACCTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR-3UTR TCA 90 bp | GGTACAGGCCAAGCAGGTGCTGCGACTGGAGGTGGGGATTGGAGAGGCTTGTCACAAGCTCCCCTCTCCTaGCATGGCATCCAGAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: GTGQAGAATGGGDWRGLSQAPLS*HGIQRS Trigger: GGACCTCTGGATGCCATGTCAGGAGAGGGGAGCTTG...TGACAAGCCTCTCCAATCCCCACCTCCAGTCGCAGCACCTGCTTGGCCTGTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR-3UTR TCA 90 bp | TATCCATGGAAACCTGAGAGGTCTGGGGCTGGGCAAGTCTACTATTTGGAAACTGTCCAGACAATGGGCTaGGAGACTGAGGAGGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: YPWKPERSGAGQVYYLETVQTMG*ETEEEN Trigger: GTTCTCCTCCTCAGTCTCTCAGCCCATTGTCTGGAC...AGTTTCCAAATAGTAGACTTGCCCAGCCCCAGACCTCTCAGGTTTCCATGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCAAGCCATTGGATTTTATTATCCATGGAAACCTGAGAGGTCTGGGGCTGGGGTCCAGACAATGGGCTaGGAGACTGAGGAGGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: KQAIGFYYPWKPERSGAGVQTMG*ETEEEN Trigger: GTTCTCCTCCTCAGTCTCTCAGCCCATTGTCTGGAC...CCCAGCCCCAGACCTCTCAGGTTTCCATGGATAATAAAATCCAATGGCTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGATTCAGAATAAGCATCATAGAAGTCAAGGACAAGAAAGGATGGGGAGATGCTGCGACTGGAGGTaGGGATTGGAGAGGCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: AWIQNKHHRSQGQERMGRCCDWR*GLERLV Trigger: GACAAGCCTCTCCAATCCCCACCTCCAGTCGCAGCA...TCTCCCCATCCTTTCTTGTCCTTGACTTCTATGATGCTTATTCTGAATCCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCAAGCCATTGGATTTTATTATCCATGGAAACCTGAGAGGTCTGGGGCTGGGGATGAGTCCAGACAATaGGCTGAGAGACTGAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: KQAIGFYYPWKPERSGAGDESRQ*AERLRR Trigger: CCTCCTCAGTCTCTCAGCCCATTGTCTGGACTCATC...CCCAGCCCCAGACCTCTCAGGTTTCCATGGATAATAAAATCCAATGGCTTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCAAGCCATTGGATTTTATTATCCATGGAAACCTGAGAGGTCTGGGGCTGGGGCATCCAGAGGTCCTTaGATCATGCAGGCAATAGGA | + |
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Preference number: 2 (lower is better) Translates to: KQAIGFYYPWKPERSGAGASRGP*IMQAIG Trigger: TCCTATTGCCTGCATGATCCAAGGACCTCTGGATGC...CCCAGCCCCAGACCTCTCAGGTTTCCATGGATAATAAAATCCAATGGCTTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGGACAAGAAAGGATGGGGAGATGGTTATTATGATGGCTGAATTACGATGTAGCAGGTGCTGCGACTaGAGGTGGGGATTGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: SRTRKDGEMVIMMAELRCSRCCD*RWGLER Trigger: CCTCTCCAATCCCCACCTCCAGTCGCAGCACCTGCT...ACATCGTAATTCAGCCATCATAATAACCATCTCCCCATCCTTTCTTGTCCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAGGACAAGAAAGGATGGGGAGATGGTTATTATGATGGCTGAATTACGATGTCCTCTGAAGGACATCTaGTCCTCTTGTCAAGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: SRTRKDGEMVIMMAELRCPLKDI*SSCQAP Trigger: GGGAGCTTGACAAGAGGATCAGATGTCCTTCAGAGG...ACATCGTAATTCAGCCATCATAATAACCATCTCCCCATCCTTTCTTGTCCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR-3UTR TCA 90 bp | TATCCATGGAAACCTGAGAGGTCTGGGGCTGGGCAAGTCTACTATTTGGAAACTAACCAGGAACAGTCCTaGACTTCACACAGAAAAACA | + |
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Preference number: 2 (lower is better) Translates to: YPWKPERSGAGQVYYLETNQEQS*TSHRKT Trigger: TGTTTTTCTGTGTGAAGTTCAGGACTGTTCCTGGTT...AGTTTCCAAATAGTAGACTTGCCCAGCCCCAGACCTCTCAGGTTTCCATGGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGGACAAGAAAGGATGGGGAGATGGTTATTATGATGGCTGAATTACGATGTTCTGCCATCTCAAGCTaGGGCACCTCTGAAGGACAT | + |
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Preference number: 2 (lower is better) Translates to: SRTRKDGEMVIMMAELRCSAISS*GTSEGH Trigger: ATGTCCTTCAGAGGTGCCCCAGCTTGAGATGGCAGA...ACATCGTAATTCAGCCATCATAATAACCATCTCCCCATCCTTTCTTGTCCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR GCA 72 bp | CCAAAGGGTGCAAAGCGGTACAGGCCAAGCAGGTGCTaGGACTGGAGGTGGGGATTGGAGAGGCTTGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: PKGAKRYRPSRC*DWRWGLERLVR Trigger: CCTGACAAGCCTCTCCAATCCCCACCTCCAGTCGCAGCACCTGCTTGGCCTGTACCGCTTTGCACCCTTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR GCA 72 bp | GTCCCAAAGGGTGCAAAGCGGTACAGGCCAAGCAGGTaGTGCGACTGGAGGTGGGGATTGGAGAGGCTTGTC | + |
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Preference number: 3 (lower is better) Translates to: VPKGAKRYRPSR*CDWRWGLERLV Trigger: GACAAGCCTCTCCAATCCCCACCTCCAGTCGCAGCACCTGCTTGGCCTGTACCGCTTTGCACCCTTTGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR CCA 72 bp | ACAGGCCAAGCAGGTGCTGCGACTGGAGGTGGGGATTaGAGAGGCTTGTCAGGGGCTAAGAGAGGGAAGGTC | + |
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Preference number: 3 (lower is better) Translates to: TGQAGAATGGGD*RGLSGAKRGKV Trigger: GACCTTCCCTCTCTTAGCCCCTGACAAGCCTCTCCAATCCCCACCTCCAGTCGCAGCACCTGCTTGGCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR TCA 72 bp | CCCATCACAGTCTGCCATCTCAAGCTGGGGCACCTCTaGAGGACATCTGATCCTCTTGTCAAGCTCCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: PITVCHLKLGHL*RTSDPLVKLPS Trigger: AGAGGGGAGCTTGACAAGAGGATCAGATGTCCTTCAGAGGTGCCCCAGCTTGAGATGGCAGACTGTGATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR CCA 72 bp | AAGCTCCCCTCTCCTGACATGGCATCCAGAGGTCCTTaGATCATGCAGGCAATAGGAAACCACTTGAGCACG | + |
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Preference number: 3 (lower is better) Translates to: KLPSPDMASRGP*IMQAIGNHLST Trigger: CGTGCTCAAGTGGTTTCCTATTGCCTGCATGATCCAAGGACCTCTGGATGCCATGTCAGGAGAGGGGAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR-3UTR CAA 90 bp | AAGCAAGCCATTGGATTTTATTATCCATGGAAACCTGAGAGGTCTGGGGCTGGGGGGGATTGGAGAGGCTaGTCAGGGGCTAAGAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: KQAIGFYYPWKPERSGAGGDWRG*SGAKRG Trigger: CCCTCTCTTAGCCCCTGACAAGCCTCTCCAATCCCC...CCCAGCCCCAGACCTCTCAGGTTTCCATGGATAATAAAATCCAATGGCTTGCTT 53% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR-3UTR CAA 90 bp | TATTATCCATGGAAACCTGAGAGGTCTGGGGCTGGGCAAGTCTACTATTTGGAAGGGGATTGGAGAGGCTaGTCAGGGGCTAAGAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: YYPWKPERSGAGQVYYLEGDWRG*SGAKRG Trigger: CCCTCTCTTAGCCCCTGACAAGCCTCTCCAATCCCC...TTCCAAATAGTAGACTTGCCCAGCCCCAGACCTCTCAGGTTTCCATGGATAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR-3UTR CAA 90 bp | TATCCATGGAAACCTGAGAGGTCTGGGGCTGGGCAAGTCTACTATTTGGAAACTGGCATCCAGAGGTCCTaGGATCATGCAGGCAATAGG | + |
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Preference number: 3 (lower is better) Translates to: YPWKPERSGAGQVYYLETGIQRS*DHAGNR Trigger: CCTATTGCCTGCATGATCCAAGGACCTCTGGATGCC...AGTTTCCAAATAGTAGACTTGCCCAGCCCCAGACCTCTCAGGTTTCCATGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR TCA 72 bp | AGTCAAGGACAAGAAAGGATGGGGAGATGGTTATTATaGTGGCTGAATTACGATGTGCTAAATGTGATCTCA | + |
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Preference number: 3 (lower is better) Translates to: SQGQERMGRWLL*WLNYDVLNVIS Trigger: TGAGATCACATTTAGCACATCGTAATTCAGCCATCATAATAACCATCTCCCCATCCTTTCTTGTCCTTGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| 3UTR CAA 72 bp | GCAGGTGCTGCGACTGGAGGTGGGGATTGGAGAGGCTaGTCAGGGGCTAAGAGAGGGAAGGTCATAGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: AGAATGGGDWRG*SGAKRGKVIAV Trigger: CACAGCTATGACCTTCCCTCTCTTAGCCCCTGACAAGCCTCTCCAATCCCCACCTCCAGTCGCAGCACCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR GCA 90 bp | GGGAGAGAAGGTAAACCCATCCCATCACAGTCTGCCATCTCAAGCTGGGGCACCGCTCCGGAGACCACGTaGCAGCAGAAGAAAGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: GREGKPIPSQSAISSWGTAPETT*QQKKVV Trigger: CACCACTTTCTTCTGCTGGCACGTGGTCTCCGGAGC...GGTGCCCCAGCTTGAGATGGCAGACTGTGATGGGATGGGTTTACCTTCTCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR TCA 90 bp | GGTACAGGCCAAGCAGGTGCTGCGACTGGAGGTGGGGATTGGAGAGGCTTGTCATTGGTTTGTACAGCATaGAGCCTATCTGCATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: GTGQAGAATGGGDWRGLSLVCTA*SLSASA Trigger: GGCTGATGCAGATAGGCTTCATGCTGTACAAACCAA...TGACAAGCCTCTCCAATCCCCACCTCCAGTCGCAGCACCTGCTTGGCCTGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR TCA 90 bp | TCCAGAGGTCCTTGGATCATGCAGGCAATAGGAAACCACTTGAGCACGTCCAGGGGAACATGGCCTGGATaGGCAGCATGTGAAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SRGPWIMQAIGNHLSTSRGTWPG*AACEAA Trigger: TGCAGCTTCACATGCTGCTCATCCAGGCCATGTTCC...CCTGGACGTGCTCAAGTGGTTTCCTATTGCCTGCATGATCCAAGGACCTCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR GCA 90 bp | CCTGACATGGCATCCAGAGGTCCTTGGATCATGCAGGCAATAGGAAACCACTTGGCTCCGGAGACCACGTaGCAGCAGAAGAAAGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: PDMASRGPWIMQAIGNHLAPETT*QQKKVV Trigger: CACCACTTTCTTCTGCTGGCACGTGGTCTCCGGAGC...CAAGTGGTTTCCTATTGCCTGCATGATCCAAGGACCTCTGGATGCCATGTCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR TCA 90 bp | GGGAGAGAAGGTAAACCCATCCCATCACAGTCTGCCATCTCAAGCTGGGGCACCATGAAGTTTCTCAGGTaGTGCCTCTTGGTGATGAGT | + |
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Preference number: 4 (lower is better) Translates to: GREGKPIPSQSAISSWGTMKFLR*CLLVMS Trigger: ACTCATCACCAAGAGGCATCACCTGAGAAACTTCAT...GGTGCCCCAGCTTGAGATGGCAGACTGTGATGGGATGGGTTTACCTTCTCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR GCA 90 bp | CGGTACAGGCCAAGCAGGTGCTGCGACTGGAGGTGGGGATTGGAGAGGCTTGTCGTGATGAGTACCAACTaGCAATTAATGCTATTCAAC | + |
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Preference number: 4 (lower is better) Translates to: RYRPSRCCDWRWGLERLVVMSTN*QLMLFN Trigger: GTTGAATAGCATTAATTGGCAGTTGGTACTCATCAC...GACAAGCCTCTCCAATCCCCACCTCCAGTCGCAGCACCTGCTTGGCCTGTACCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR GCA 90 bp | TCCAGAGGTCCTTGGATCATGCAGGCAATAGGAAACCACTTGAGCACGTCCAGGCTGGCTGATCACATCTaGACACCCACTCAGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: SRGPWIMQAIGNHLSTSRLADHI*TPTQEE Trigger: TTCTTCCTGAGTGGGTGTGCAGATGTGATCAGCCAG...CCTGGACGTGCTCAAGTGGTTTCCTATTGCCTGCATGATCCAAGGACCTCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR TCA 90 bp | TCCAGAGGTCCTTGGATCATGCAGGCAATAGGAAACCACTTGAGCACGTCCAGGACTGTTTGCGGTACATaGAGTTTCTCAGGTGATGCC | + |
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Preference number: 4 (lower is better) Translates to: SRGPWIMQAIGNHLSTSRTVCGT*SFSGDA Trigger: GGCATCACCTGAGAAACTTCATGTACCGCAAACAGT...CCTGGACGTGCTCAAGTGGTTTCCTATTGCCTGCATGATCCAAGGACCTCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR TCA 90 bp | TATCCATGGAAACCTGAGAGGTCTGGGGCTGGGCAAGTCTACTATTTGGAAACTTGGATGAGCAGCATGTaGAGCTGCAGCTCCACTCCT | + |
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Preference number: 4 (lower is better) Translates to: YPWKPERSGAGQVYYLETWMSSM*SCSSTP Trigger: AGGAGTGGAGCTGCAGCTTCACATGCTGCTCATCCA...AGTTTCCAAATAGTAGACTTGCCCAGCCCCAGACCTCTCAGGTTTCCATGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR TCA 90 bp | AAGCAAGCCATTGGATTTTATTATCCATGGAAACCTGAGAGGTCTGGGGCTGGGGGAACATGGCCTGGATaGGCAGCATGTGAAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: KQAIGFYYPWKPERSGAGGTWPG*AACEAA Trigger: TGCAGCTTCACATGCTGCTCATCCAGGCCATGTTCC...CCCAGCCCCAGACCTCTCAGGTTTCCATGGATAATAAAATCCAATGGCTTGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR GCA 90 bp | AAGCAAGCCATTGGATTTTATTATCCATGGAAACCTGAGAGGTCTGGGGCTGGGAGCATGAAGCCTATCTaGATCAGCCAGGAGCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: KQAIGFYYPWKPERSGAGSMKPI*ISQEPV Trigger: CACCGGCTCCTGGCTGATGCAGATAGGCTTCATGCT...CCCAGCCCCAGACCTCTCAGGTTTCCATGGATAATAAAATCCAATGGCTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR TCA 90 bp | GCCTGGATTCAGAATAAGCATCATAGAAGTCAAGGACAAGAAAGGATGGGGAGAGCAGCAGGTTCTGGCTaGTCACATCTGCACACCCAC | + |
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Preference number: 4 (lower is better) Translates to: AWIQNKHHRSQGQERMGRAAGSG*SHLHTH Trigger: GTGGGTGTGCAGATGTGATCAGCCAGAACCTGCTGC...TCTCCCCATCCTTTCTTGTCCTTGACTTCTATGATGCTTATTCTGAATCCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR TCA 90 bp | CCTGACATGGCATCCAGAGGTCCTTGGATCATGCAGGCAATAGGAAACCACTTGATGAAGTTTCTCAGGTaGTGCCTCTTGGTGATGAGT | + |
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Preference number: 4 (lower is better) Translates to: PDMASRGPWIMQAIGNHLMKFLR*CLLVMS Trigger: ACTCATCACCAAGAGGCATCACCTGAGAAACTTCAT...CAAGTGGTTTCCTATTGCCTGCATGATCCAAGGACCTCTGGATGCCATGTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR GCA 90 bp | CCTGACATGGCATCCAGAGGTCCTTGGATCATGCAGGCAATAGGAAACCACTTGAGCCCTGGAGAGAAATaGCGCATGATAAAGACCATA | + |
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Preference number: 4 (lower is better) Translates to: PDMASRGPWIMQAIGNHLSPGEK*RMIKTI Trigger: TATGGTCTTTATCATGCGGCATTTCTCTCCAGGGCT...CAAGTGGTTTCCTATTGCCTGCATGATCCAAGGACCTCTGGATGCCATGTCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059607.8 |
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| CDS-3UTR GCA 90 bp | GCCTGGATTCAGAATAAGCATCATAGAAGTCAAGGACAAGAAAGGATGGGGAGAAGCATGAAGCCTATCTaGATCAGCCAGGAGCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: AWIQNKHHRSQGQERMGRSMKPI*ISQEPV Trigger: CACCGGCTCCTGGCTGATGCAGATAGGCTTCATGCT...TCTCCCCATCCTTTCTTGTCCTTGACTTCTATGATGCTTATTCTGAATCCAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR TCA 90 bp | TATTATCCATGGAAACCTGAGAGGTCTGGGGCTGGGCAAGTCTACTATTTGGAATCTGTGTCCTGCATATaGGACACCATCAGGGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: YYPWKPERSGAGQVYYLESVSCI*DTIRGK Trigger: TTTGCCCCTGATGGTGTCTCATATGCAGGACACAGA...TTCCAAATAGTAGACTTGCCCAGCCCCAGACCTCTCAGGTTTCCATGGATAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR TCA 90 bp | GGCTGGGCAAGTCTACTATTTGGAAACTTTACTGAGATGAGTCCAGACAATGGGTCTGTGTCCTGCATATaGGACACCATCAGGGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: GWASLLFGNFTEMSPDNGSVSCI*DTIRGK Trigger: TTTGCCCCTGATGGTGTCTCATATGCAGGACACAGA...CCCATTGTCTGGACTCATCTCAGTAAAGTTTCCAAATAGTAGACTTGCCCAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR TCA 90 bp | AAGCAAGCCATTGGATTTTATTATCCATGGAAACCTGAGAGGTCTGGGGCTGGGTTGGTTTGTACAGCATaGAGCCTATCTGCATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: KQAIGFYYPWKPERSGAGLVCTA*SLSASA Trigger: GGCTGATGCAGATAGGCTTCATGCTGTACAAACCAA...CCCAGCCCCAGACCTCTCAGGTTTCCATGGATAATAAAATCCAATGGCTTGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR GCA 90 bp | GGCTGGGCAAGTCTACTATTTGGAAACTTTACTGAGATGAGTCCAGACAATGGGCTGGCTGATCACATCTaGACACCCACTCAGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: GWASLLFGNFTEMSPDNGLADHI*TPTQEE Trigger: TTCTTCCTGAGTGGGTGTGCAGATGTGATCAGCCAG...CCCATTGTCTGGACTCATCTCAGTAAAGTTTCCAAATAGTAGACTTGCCCAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR CCA 90 bp | GGCTGGGCAAGTCTACTATTTGGAAACTTTACTGAGATGAGTCCAGACAATGGGCCAAGGACGGGATGGTaGATATTGGACAGGAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: GWASLLFGNFTEMSPDNGPRTGW*ILDRRV Trigger: AACTCTCCTGTCCAATATCCACCATCCCGTCCTTGG...CCCATTGTCTGGACTCATCTCAGTAAAGTTTCCAAATAGTAGACTTGCCCAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059607.8 |
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| CDS-3UTR CCA 90 bp | GGCTGGGCAAGTCTACTATTTGGAAACTTTACTGAGATGAGTCCAGACAATGGGCGGGATGGTGGATATTaGACAGGAGAGTTGCATATC | + |
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Preference number: 4 (lower is better) Translates to: GWASLLFGNFTEMSPDNGRDGGY*TGELHI Trigger: GATATGCAACTCTCCTGTCCAATATCCACCATCCCG...CCCATTGTCTGGACTCATCTCAGTAAAGTTTCCAAATAGTAGACTTGCCCAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059607.8 |
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| CDS-3UTR TCA 90 bp | GCCTGGATTCAGAATAAGCATCATAGAAGTCAAGGACAAGAAAGGATGGGGAGAACTGTTTGCGGTACATaGAGTTTCTCAGGTGATGCC | + |
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Preference number: 4 (lower is better) Translates to: AWIQNKHHRSQGQERMGRTVCGT*SFSGDA Trigger: GGCATCACCTGAGAAACTTCATGTACCGCAAACAGT...TCTCCCCATCCTTTCTTGTCCTTGACTTCTATGATGCTTATTCTGAATCCAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR CCA 90 bp | CCTGACATGGCATCCAGAGGTCCTTGGATCATGCAGGCAATAGGAAACCACTTGATGCTATTCAACTCTTaGGCTACTAAAATGCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: PDMASRGPWIMQAIGNHLMLFNS*ATKMQE Trigger: TTCTTGCATTTTAGTAGCCCAAGAGTTGAATAGCAT...CAAGTGGTTTCCTATTGCCTGCATGATCCAAGGACCTCTGGATGCCATGTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR CCA 90 bp | TATCCATGGAAACCTGAGAGGTCTGGGGCTGGGCAAGTCTACTATTTGGAAACTTTTATAGCCAGAGATTaGTTTGTACAGCATGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: YPWKPERSGAGQVYYLETFIARD*FVQHEA Trigger: GGCTTCATGCTGTACAAACCAATCTCTGGCTATAAA...AGTTTCCAAATAGTAGACTTGCCCAGCCCCAGACCTCTCAGGTTTCCATGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR GCA 90 bp | TATTATCCATGGAAACCTGAGAGGTCTGGGGCTGGGCAAGTCTACTATTTGGAAGTGATGAGTACCAACTaGCAATTAATGCTATTCAAC | + |
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Preference number: 4 (lower is better) Translates to: YYPWKPERSGAGQVYYLEVMSTN*QLMLFN Trigger: GTTGAATAGCATTAATTGGCAGTTGGTACTCATCAC...TTCCAAATAGTAGACTTGCCCAGCCCCAGACCTCTCAGGTTTCCATGGATAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR CCA 90 bp | TATTATCCATGGAAACCTGAGAGGTCTGGGGCTGGGCAAGTCTACTATTTGGAAATGCTATTCAACTCTTaGGCTACTAAAATGCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: YYPWKPERSGAGQVYYLEMLFNS*ATKMQE Trigger: TTCTTGCATTTTAGTAGCCCAAGAGTTGAATAGCAT...TTCCAAATAGTAGACTTGCCCAGCCCCAGACCTCTCAGGTTTCCATGGATAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR CAA 90 bp | TCCAGAGGTCCTTGGATCATGCAGGCAATAGGAAACCACTTGAGCACGTCCAGGAGAACTACACACCTCTaGGGCAGCAGGTTCTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: SRGPWIMQAIGNHLSTSRRTTHL*GSRFWL Trigger: CAGCCAGAACCTGCTGCCCAAGAGGTGTGTAGTTCT...CCTGGACGTGCTCAAGTGGTTTCCTATTGCCTGCATGATCCAAGGACCTCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS TCA 90 bp | CGCATTGCTCCAGAACTACACACCTCTTGGGCAGCAGGTTCTGGCTaGTCACATCTGCACACCCACTCAGGAAGAAGGACATGTAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: RIAPELHTSWAAGSG*SHLHTHSGRRTCRE Trigger: CTCTCTACATGTCCTTCTTCCTGAGTGGGTGTGCAGATGTGATCAGCCAGAACCTGCTGCCCAAGAGGTGTGTAGTTCTGGAGCAATGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS GCA 90 bp | ACCATCAGGGGCAAAAACAGATACATGCTCAACGCTTGGGCGCATTaGTCCAGAACTACACACCTCTTGGGCAGCAGGTTCTGGCTGATC | + |
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Preference number: 5 (lower is better) Translates to: TIRGKNRYMLNAWAH*SRTTHLLGSRFWLI Trigger: GATCAGCCAGAACCTGCTGCCCAAGAGGTGTGTAGTTCTGGAGCAATGCGCCCAAGCGTTGAGCATGTATCTGTTTTTGCCCCTGATGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS CCA 90 bp | TCATCAAGAAGGCTCCGGAGACCACGTGCCAGCAGAAGAAAGTGGTaGCGAACGCTACGTCGTTCTTGTCCTCGTCCAACCATTTATAGC | + |
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Preference number: 5 (lower is better) Translates to: SSRRLRRPRASRRKW*RTLRRSCPRPTIYS Trigger: GCTATAAATGGTTGGACGAGGACAAGAACGACGTAGCGTTCGCCACCACTTTCTTCTGCTGGCACGTGGTCTCCGGAGCCTTCTTGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS CCA 90 bp | AACCTTGTCCATCTCCCTTTGCTCCAAGGACGGGATGGTGGATATTaGACAGGAGAGTTGCATATCACAGCCCTGGAGAGAAATGCCGCA | + |
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Preference number: 5 (lower is better) Translates to: NLVHLPLLQGRDGGY*TGELHITALERNAA Trigger: TGCGGCATTTCTCTCCAGGGCTGTGATATGCAACTCTCCTGTCCAATATCCACCATCCCGTCCTTGGAGCAAAGGGAGATGGACAAGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059607.8 |
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| CDS CCA 90 bp | AGATCATCAAGAAGGCTCCGGAGACCACGTGCCAGCAGAAGAAAGTaGTGGCGAACGCTACGTCGTTCTTGTCCTCGTCCAACCATTTAT | + |
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Preference number: 5 (lower is better) Translates to: RSSRRLRRPRASRRK*WRTLRRSCPRPTIY Trigger: ATAAATGGTTGGACGAGGACAAGAACGACGTAGCGTTCGCCACCACTTTCTTCTGCTGGCACGTGGTCTCCGGAGCCTTCTTGATGATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS GCA 90 bp | CTGTGTCCTGCATATGAGACACCATCAGGGGCAAAAACAGATACATaGTCAACGCTTGGGCGCATTGCTCCAGAACTACACACCTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: LCPAYETPSGAKTDT*STLGRIAPELHTSW Trigger: CCAAGAGGTGTGTAGTTCTGGAGCAATGCGCCCAAGCGTTGAGCATGTATCTGTTTTTGCCCCTGATGGTGTCTCATATGCAGGACACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR CAA 90 bp | TATCCATGGAAACCTGAGAGGTCTGGGGCTGGGCAAGTCTACTATTTGGAAACTAGAACTACACACCTCTaGGGCAGCAGGTTCTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: YPWKPERSGAGQVYYLETRTTHL*GSRFWL Trigger: CAGCCAGAACCTGCTGCCCAAGAGGTGTGTAGTTCT...AGTTTCCAAATAGTAGACTTGCCCAGCCCCAGACCTCTCAGGTTTCCATGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR CAA 90 bp | TATCCATGGAAACCTGAGAGGTCTGGGGCTGGGCAAGTCTACTATTTGGAAACTAGATGCTGCCACTGTTaGCGGTACATGAAGTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: YPWKPERSGAGQVYYLETRCCHC*RYMKFL Trigger: GAGAAACTTCATGTACCGCAAACAGTGGCAGCATCT...AGTTTCCAAATAGTAGACTTGCCCAGCCCCAGACCTCTCAGGTTTCCATGGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS CCA 90 bp | GACGGGATGGTGGATATTGGACAGGAGAGTTGCATATCACAGCCCTaGAGAGAAATGCCGCATGATAAAGACCATAGAGAAATAAGGACA | + |
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Preference number: 5 (lower is better) Translates to: DGMVDIGQESCISQP*REMPHDKDHREIRT Trigger: TGTCCTTATTTCTCTATGGTCTTTATCATGCGGCATTTCTCTCCAGGGCTGTGATATGCAACTCTCCTGTCCAATATCCACCATCCCGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059607.8 |
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| CDS-3UTR CAA 90 bp | TCAAGGACAAGAAAGGATGGGGAGATGGTTATTATGATGGCTGAATTACGATGTCTTGTCCATCTCCCTTaGCTCCAAGGACGGGATGGT | + |
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Preference number: 5 (lower is better) Translates to: SRTRKDGEMVIMMAELRCLVHLP*LQGRDG Trigger: ACCATCCCGTCCTTGGAGCAAAGGGAGATGGACAAG...ACATCGTAATTCAGCCATCATAATAACCATCTCCCCATCCTTTCTTGTCCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059607.8 |
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| CDS TCA 90 bp | AGAGTAAGATGCTGCCACTGTTTGCGGTACATGAAGTTTCTCAGGTaGTGCCTCTTGGTGATGAGTACCAACTGCCAATTAATGCTATTC | + |
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Preference number: 5 (lower is better) Translates to: RVRCCHCLRYMKFLR*CLLVMSTNCQLMLF Trigger: GAATAGCATTAATTGGCAGTTGGTACTCATCACCAAGAGGCATCACCTGAGAAACTTCATGTACCGCAAACAGTGGCAGCATCTTACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS-3UTR CAA 90 bp | TCAAGGACAAGAAAGGATGGGGAGATGGTTATTATGATGGCTGAATTACGATGTAGATGCTGCCACTGTTaGCGGTACATGAAGTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: SRTRKDGEMVIMMAELRCRCCHC*RYMKFL Trigger: GAGAAACTTCATGTACCGCAAACAGTGGCAGCATCT...ACATCGTAATTCAGCCATCATAATAACCATCTCCCCATCCTTTCTTGTCCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS CCA 90 bp | CTCTTGGTGATGAGTACCAACTGCCAATTAATGCTATTCAACTCTTaGGCTACTAAAATGCAAGAACTCAGTATCTTCAGAAAGCCGATG | + |
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Preference number: 5 (lower is better) Translates to: LLVMSTNCQLMLFNS*ATKMQELSIFRKPM Trigger: CATCGGCTTTCTGAAGATACTGAGTTCTTGCATTTTAGTAGCCCAAGAGTTGAATAGCATTAATTGGCAGTTGGTACTCATCACCAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS CCA 72 bp | AGGCTCCGGAGACCACGTGCCAGCAGAAGAAAGTGGTaGCGAACGCTACGTCGTTCTTGTCCTCGTCCAACC | + |
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Preference number: 6 (lower is better) Translates to: RLRRPRASRRKW*RTLRRSCPRPT Trigger: GGTTGGACGAGGACAAGAACGACGTAGCGTTCGCCACCACTTTCTTCTGCTGGCACGTGGTCTCCGGAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS CCA 72 bp | AGAAGGCTCCGGAGACCACGTGCCAGCAGAAGAAAGTaGTGGCGAACGCTACGTCGTTCTTGTCCTCGTCCA | + |
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Preference number: 6 (lower is better) Translates to: RRLRRPRASRRK*WRTLRRSCPRP Trigger: TGGACGAGGACAAGAACGACGTAGCGTTCGCCACCACTTTCTTCTGCTGGCACGTGGTCTCCGGAGCCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS CAA 90 bp | TACATGCTCAACGCTTGGGCGCATTGCTCCAGAACTACACACCTCTaGGGCAGCAGGTTCTGGCTGATCACATCTGCACACCCACTCAGG | + |
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Preference number: 6 (lower is better) Translates to: YMLNAWAHCSRTTHL*GSRFWLITSAHPLR Trigger: CCTGAGTGGGTGTGCAGATGTGATCAGCCAGAACCTGCTGCCCAAGAGGTGTGTAGTTCTGGAGCAATGCGCCCAAGCGTTGAGCATGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS CAA 72 bp | AACGCTTGGGCGCATTGCTCCAGAACTACACACCTCTaGGGCAGCAGGTTCTGGCTGATCACATCTGCACAC | + |
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Preference number: 6 (lower is better) Translates to: NAWAHCSRTTHL*GSRFWLITSAH Trigger: GTGTGCAGATGTGATCAGCCAGAACCTGCTGCCCAAGAGGTGTGTAGTTCTGGAGCAATGCGCCCAAGCGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS TCA 72 bp | CCAGAACTACACACCTCTTGGGCAGCAGGTTCTGGCTaGTCACATCTGCACACCCACTCAGGAAGAAGGACA | + |
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Preference number: 6 (lower is better) Translates to: PELHTSWAAGSG*SHLHTHSGRRT Trigger: TGTCCTTCTTCCTGAGTGGGTGTGCAGATGTGATCAGCCAGAACCTGCTGCCCAAGAGGTGTGTAGTTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS CCA 72 bp | TGCTCCAGAACTACACACCTCTTGGGCAGCAGGTTCTaGCTGATCACATCTGCACACCCACTCAGGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: CSRTTHLLGSRF*LITSAHPLRKK Trigger: CTTCTTCCTGAGTGGGTGTGCAGATGTGATCAGCCAGAACCTGCTGCCCAAGAGGTGTGTAGTTCTGGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS CAA 72 bp | CCATCTCCCTTTGCTCCAAGGACGGGATGGTGGATATaGGACAGGAGAGTTGCATATCACAGCCCTGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: PSPFAPRTGWWI*DRRVAYHSPGE Trigger: CTCTCCAGGGCTGTGATATGCAACTCTCCTGTCCAATATCCACCATCCCGTCCTTGGAGCAAAGGGAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059607.8 |
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| CDS CAA 72 bp | TACAGAAAGGCCTTCAGCATCCAGATCAGCAGCACATaGGGAGCCCACAGCTCTATAGTCTCCACTAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: YRKAFSIQISST*GAHSSIVSTRA Trigger: GGCCCTAGTGGAGACTATAGAGCTGTGGGCTCCCAATGTGCTGCTGATCTGGATGCTGAAGGCCTTTCTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS CAA 90 bp | CACCATCAGGGGCAAAAACAGATACATGCTCAACGCTTGGGCGCATaGCTCCAGAACTACACACCTCTTGGGCAGCAGGTTCTGGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: HHQGQKQIHAQRLGA*LQNYTPLGQQVLAD Trigger: ATCAGCCAGAACCTGCTGCCCAAGAGGTGTGTAGTTCTGGAGCAATGCGCCCAAGCGTTGAGCATGTATCTGTTTTTGCCCCTGATGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS GCA 72 bp | ACACCTCTTGGGCAGCAGGTTCTGGCTGATCACATCTaGACACCCACTCAGGAAGAAGGACATGTAGAGAGT | + |
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Preference number: 6 (lower is better) Translates to: TPLGQQVLADHI*TPTQEEGHVES Trigger: ACTCTCTACATGTCCTTCTTCCTGAGTGGGTGTGCAGATGTGATCAGCCAGAACCTGCTGCCCAAGAGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS GCA 72 bp | GGCAAAAACAGATACATGCTCAACGCTTGGGCGCATTaGTCCAGAACTACACACCTCTTGGGCAGCAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: GKNRYMLNAWAH*SRTTHLLGSRF Trigger: GAACCTGCTGCCCAAGAGGTGTGTAGTTCTGGAGCAATGCGCCCAAGCGTTGAGCATGTATCTGTTTTTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS CCA 72 bp | CATCTCCCTTTGCTCCAAGGACGGGATGGTGGATATTaGACAGGAGAGTTGCATATCACAGCCCTGGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: HLPLLQGRDGGY*TGELHITALER Trigger: TCTCTCCAGGGCTGTGATATGCAACTCTCCTGTCCAATATCCACCATCCCGTCCTTGGAGCAAAGGGAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059607.8 |
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| CDS CCA 72 bp | CCTTGTCCATCTCCCTTTGCTCCAAGGACGGGATGGTaGATATTGGACAGGAGAGTTGCATATCACAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: PCPSPFAPRTGW*ILDRRVAYHSP Trigger: AGGGCTGTGATATGCAACTCTCCTGTCCAATATCCACCATCCCGTCCTTGGAGCAAAGGGAGATGGACAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059607.8 |
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| CDS CCA 72 bp | ACCATCAGGGGCAAAAACAGATACATGCTCAACGCTTaGGCGCATTGCTCCAGAACTACACACCTCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: TIRGKNRYMLNA*AHCSRTTHLLG Trigger: GCCCAAGAGGTGTGTAGTTCTGGAGCAATGCGCCCAAGCGTTGAGCATGTATCTGTTTTTGCCCCTGATGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS CAA 72 bp | GGGCAAAAACAGATACATGCTCAACGCTTGGGCGCATaGCTCCAGAACTACACACCTCTTGGGCAGCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: GQKQIHAQRLGA*LQNYTPLGQQV Trigger: AACCTGCTGCCCAAGAGGTGTGTAGTTCTGGAGCAATGCGCCCAAGCGTTGAGCATGTATCTGTTTTTGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS CAA 72 bp | CACCATCAGGGGCAAAAACAGATACATGCTCAACGCTaGGGCGCATTGCTCCAGAACTACACACCTCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: HHQGQKQIHAQR*GALLQNYTPLG Trigger: CCCAAGAGGTGTGTAGTTCTGGAGCAATGCGCCCAAGCGTTGAGCATGTATCTGTTTTTGCCCCTGATGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS CAA 90 bp | CATATGAGACACCATCAGGGGCAAAAACAGATACATGCTCAACGCTaGGGCGCATTGCTCCAGAACTACACACCTCTTGGGCAGCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: HMRHHQGQKQIHAQR*GALLQNYTPLGQQV Trigger: AACCTGCTGCCCAAGAGGTGTGTAGTTCTGGAGCAATGCGCCCAAGCGTTGAGCATGTATCTGTTTTTGCCCCTGATGGTGTCTCATATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS GCA 72 bp | GCATATGAGACACCATCAGGGGCAAAAACAGATACATaGTCAACGCTTGGGCGCATTGCTCCAGAACTACAC | + |
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Preference number: 6 (lower is better) Translates to: AYETPSGAKTDT*STLGRIAPELH Trigger: GTGTAGTTCTGGAGCAATGCGCCCAAGCGTTGAGCATGTATCTGTTTTTGCCCCTGATGGTGTCTCATATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS CAA 72 bp | TCTTCAGAAAGCCGATGTAATACATTTGCCGTAACCTaGTCCATCTCCCTTTGCTCCAAGGACGGGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: SSESRCNTFAVT*SISLCSKDGMV Trigger: CACCATCCCGTCCTTGGAGCAAAGGGAGATGGACAAGGTTACGGCAAATGTATTACATCGGCTTTCTGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059607.8 |
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| CDS TCA 72 bp | TGCTGCCACTGTTTGCGGTACATGAAGTTTCTCAGGTaGTGCCTCTTGGTGATGAGTACCAACTGCCAATTA | + |
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Preference number: 6 (lower is better) Translates to: CCHCLRYMKFLR*CLLVMSTNCQL Trigger: TAATTGGCAGTTGGTACTCATCACCAAGAGGCATCACCTGAGAAACTTCATGTACCGCAAACAGTGGCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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| CDS CAA 90 bp | AACTCAGTATCTTCAGAAAGCCGATGTAATACATTTGCCGTAACCTaGTCCATCTCCCTTTGCTCCAAGGACGGGATGGTGGATATTGGA | + |
|
Preference number: 6 (lower is better) Translates to: NSVSSESRCNTFAVT*SISLCSKDGMVDIG Trigger: TCCAATATCCACCATCCCGTCCTTGGAGCAAAGGGAGATGGACAAGGTTACGGCAAATGTATTACATCGGCTTTCTGAAGATACTGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059607.8 |
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| CDS CCA 72 bp | GTGGATATTGGACAGGAGAGTTGCATATCACAGCCCTaGAGAGAAATGCCGCATGATAAAGACCATAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VDIGQESCISQP*REMPHDKDHRE Trigger: TTCTCTATGGTCTTTATCATGCGGCATTTCTCTCCAGGGCTGTGATATGCAACTCTCCTGTCCAATATCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059607.8 |
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| CDS CCA 72 bp | ATGAGTACCAACTGCCAATTAATGCTATTCAACTCTTaGGCTACTAAAATGCAAGAACTCAGTATCTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: MSTNCQLMLFNS*ATKMQELSIFR Trigger: TCTGAAGATACTGAGTTCTTGCATTTTAGTAGCCCAAGAGTTGAATAGCATTAATTGGCAGTTGGTACTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059607.8 ENSMUST00000123490.2 |
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