Pregenerated sensors for TEDC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024118Ensembl transcript IDs: ENSMUST00000024930.8, ENSMUST00000124557.3
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGGTAATCCTTGGGAGGGGCTGTGGCCCGCTGTATACCCTTGGTaGATCTTGTACCCAATACACGGCTGCCACCCCGGCTGGGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: QGNPWEGLWPAVYPW*ILYPIHGCHPGWEP Trigger: GGGCTCCCAGCCGGGGTGGCAGCCGTGTATTGGGTACAAGATCCACCAAGGGTATACAGCGGGCCACAGCCCCTCCCAAGGATTACCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR GCA 90 bp | ATACGAAGTCTCAGCAGCATACAGGCCTTCCTCAGGATCCGTGCGTaGGCCTCCACCTCTGTAGCACTGGGCCTGTGGCTGGAACAGCCT | + |
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Preference number: 1 (lower is better) Translates to: IRSLSSIQAFLRIRA*ASTSVALGLWLEQP Trigger: AGGCTGTTCCAGCCACAGGCCCAGTGCTACAGAGGTGGAGGCGCACGCACGGATCCTGAGGAAGGCCTGTATGCTGCTGAGACTTCGTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR TCA 90 bp | TGTTTGCCCAGACTGCTTAGTCAGCAGGGTCATCTCGAAGGACTGTaGGGAAGCGTTCGCCTCCCTCACAGAGCAGACTGTACGCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: CLPRLLSQQGHLEGL*GSVRLPHRADCTQP Trigger: GGGCTGCGTACAGTCTGCTCTGTGAGGGAGGCGAACGCTTCCTCACAGTCCTTCGAGATGACCCTGCTGACTAAGCAGTCTGGGCAAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR GCA 90 bp | CTGAGTTTTGGCGGCTCTAGTGGCATCTGTGGAGTCGTTGGTTCGTaGAGAGTTGAGCTGGGCCCACAGGCAGGAATTCCGAGACACTGC | + |
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Preference number: 1 (lower is better) Translates to: LSFGGSSGICGVVGS*RVELGPQAGIPRHC Trigger: GCAGTGTCTCGGAATTCCTGCCTGTGGGCCCAGCTCAACTCTGCACGAACCAACGACTCCACAGATGCCACTAGAGCCGCCAAAACTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR GCA 90 bp | GCTTGCAGCACCTGTATCCTGTGGAGACACTGTCCTACAACGGTCTaGAGTCCTTCCAGGGTGAGCAGGCATCGGTACTCCTGCATCCAG | + |
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Preference number: 1 (lower is better) Translates to: ACSTCILWRHCPTTV*SPSRVSRHRYSCIQ Trigger: CTGGATGCAGGAGTACCGATGCCTGCTCACCCTGGAAGGACTGCAGACCGTTGTAGGACAGTGTCTCCACAGGATACAGGTGCTGCAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR CCA 90 bp | GCTCTAGTGGCATCTGTGGAGTCGTTGGTTCGTGCAGAGTTGAGCTaGGCCCACAGGCAGGAATTCCGAGACACTGCCTTCCTGAAGTCC | + |
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Preference number: 1 (lower is better) Translates to: ALVASVESLVRAELS*AHRQEFRDTAFLKS Trigger: GGACTTCAGGAAGGCAGTGTCTCGGAATTCCTGCCTGTGGGCCCAGCTCAACTCTGCACGAACCAACGACTCCACAGATGCCACTAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR TCA 90 bp | TCCTGTGGAGACACTGTCCTACAACGGTCTGCAGTCCTTCCAGGGTaGGCAGGCATCGGTACTCCTGCATCCAGTCAGTGGGAGCTATTG | + |
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Preference number: 1 (lower is better) Translates to: SCGDTVLQRSAVLPG*AGIGTPASSQWELL Trigger: CAATAGCTCCCACTGACTGGATGCAGGAGTACCGATGCCTGCTCACCCTGGAAGGACTGCAGACCGTTGTAGGACAGTGTCTCCACAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR GCA 90 bp | CTACAGTCCAGAAGAGAGGAGGGGGCTCTCCCACAGAGGCTTGTTTaGCCAGACTGCTTAGTCAGCAGGGTCATCTCGAAGGACTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: LQSRREEGALPQRLV*PDCLVSRVISKDCE Trigger: CTCACAGTCCTTCGAGATGACCCTGCTGACTAAGCAGTCTGGGCAAACAAGCCTCTGTGGGAGAGCCCCCTCCTCTCTTCTGGACTGTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR CCA 90 bp | TACGCAGCCCGACACAAGGCCAGCCAAGGCGGTCCTCCAGGATCCTaGGTGTTTATCAGAGGGAGGAGTTCAGCCATCAGAACCTTTTCT | + |
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Preference number: 1 (lower is better) Translates to: YAARHKASQGGPPGS*VFIRGRSSAIRTFS Trigger: AGAAAAGGTTCTGATGGCTGAACTCCTCCCTCTGATAAACACCCAGGATCCTGGAGGACCGCCTTGGCTGGCCTTGTGTCGGGCTGCGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR GCA 90 bp | ACAACGGTCTGCAGTCCTTCCAGGGTGAGCAGGCATCGGTACTCCTaGATCCAGTCAGTGGGAGCTATTGCAAGTTCCTTTTGCATACGA | + |
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Preference number: 1 (lower is better) Translates to: TTVCSPSRVSRHRYS*IQSVGAIASSFCIR Trigger: TCGTATGCAAAAGGAACTTGCAATAGCTCCCACTGACTGGATGCAGGAGTACCGATGCCTGCTCACCCTGGAAGGACTGCAGACCGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR GCA 90 bp | CGGTACTCCTGCATCCAGTCAGTGGGAGCTATTGCAAGTTCCTTTTaGATACGAAGTCTCAGCAGCATACAGGCCTTCCTCAGGATCCGT | + |
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Preference number: 1 (lower is better) Translates to: RYSCIQSVGAIASSF*IRSLSSIQAFLRIR Trigger: ACGGATCCTGAGGAAGGCCTGTATGCTGCTGAGACTTCGTATGCAAAAGGAACTTGCAATAGCTCCCACTGACTGGATGCAGGAGTACCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR GCA 90 bp | GGTGAGCAGGCATCGGTACTCCTGCATCCAGTCAGTGGGAGCTATTaGAAGTTCCTTTTGCATACGAAGTCTCAGCAGCATACAGGCCTT | + |
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Preference number: 1 (lower is better) Translates to: GEQASVLLHPVSGSY*KFLLHTKSQQHTGL Trigger: AAGGCCTGTATGCTGCTGAGACTTCGTATGCAAAAGGAACTTGCAATAGCTCCCACTGACTGGATGCAGGAGTACCGATGCCTGCTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR CAA 90 bp | AATCCTTGGGAGGGGCTGTGGCCCGCTGTATACCCTTGGTGGATCTaGTACCCAATACACGGCTGCCACCCCGGCTGGGAGCCCGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: NPWEGLWPAVYPWWI*YPIHGCHPGWEPED Trigger: ATCCTCGGGCTCCCAGCCGGGGTGGCAGCCGTGTATTGGGTACAAGATCCACCAAGGGTATACAGCGGGCCACAGCCCCTCCCAAGGATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR GCA 90 bp | GACTGTACGCAGCCCGACACAAGGCCAGCCAAGGCGGTCCTCCAGGATCCTGGGAAGTCCTCAGGTAGCTaGAGGAGAGTCCCCTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: DCTQPDTRPAKAVLQDPGKSSGS*RRVPFS Trigger: GGAGAAGGGGACTCTCCTGCAGCTACCTGAGGACTT...CCCAGGATCCTGGAGGACCGCCTTGGCTGGCCTTGTGTCGGGCTGCGTACAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR CCA 90 bp | CAAGGACTCCCCCAGGAAGGCAGAAAGCTGAGCCTGACTAAGAAGTCTAAGAAGGGCTGCCACCCCGGCTaGGAGCCCGAGGATGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: QGLPQEGRKLSLTKKSKKGCHPG*EPEDGR Trigger: CCTCCCATCCTCGGGCTCCCAGCCGGGGTGGCAGCC...CTTCTTAGACTTCTTAGTCAGGCTCAGCTTTCTGCCTTCCTGGGGGAGTCCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR CCA 90 bp | GCAAACGGACGAGGCCTGAGTGCGCGTCTCTGCAAGGCATTCTCCTGGAAGTTGGCTCAGGGTAATCCTTaGGAGGGGCTGTGGCCCGCT | + |
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Preference number: 2 (lower is better) Translates to: ANGRGLSARLCKAFSWKLAQGNP*EGLWPA Trigger: AGCGGGCCACAGCCCCTCCCAAGGATTACCCTGAGC...CAACTTCCAGGAGAATGCCTTGCAGAGACGCGCACTCAGGCCTCGTCCGTTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR TCA 90 bp | GAAGTCTCAGCAGCATACAGGCCTTCCTCAGGATCCGTGCGTGCGCCTCCACCTGTGGCTGGAACAGCCTaGAGCCATCTGGAGTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: EVSAAYRPSSGSVRAPPPVAGTA*SHLEFV Trigger: CACAAACTCCAGATGGCTTCAGGCTGTTCCAGCCAC...AGGTGGAGGCGCACGCACGGATCCTGAGGAAGGCCTGTATGCTGCTGAGACTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR CCA 90 bp | GGGGCTCTCCCACAGAGGCTTGTTTGCCCAGACTGCTTAGTCAGCAGGGTCATCCGTGCAGAGTTGAGCTaGGCCCACAGGCAGGAATTC | + |
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Preference number: 2 (lower is better) Translates to: GALPQRLVCPDCLVSRVIRAELS*AHRQEF Trigger: GAATTCCTGCCTGTGGGCCCAGCTCAACTCTGCACG...GATGACCCTGCTGACTAAGCAGTCTGGGCAAACAAGCCTCTGTGGGAGAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR CCA 90 bp | ATCCTGTGGAGACACTGTCCTACAACGGTCTGCAGTCCTTCCAGGGTGAGCAGGGTAGCACTGGGCCTGTaGCTGGAACAGCCTGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: ILWRHCPTTVCSPSRVSRVALGL*LEQPEA Trigger: GGCTTCAGGCTGTTCCAGCCACAGGCCCAGTGCTAC...CCTGCTCACCCTGGAAGGACTGCAGACCGTTGTAGGACAGTGTCTCCACAGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR GCA 90 bp | GGTGAGCAGGCATCGGTACTCCTGCATCCAGTCAGTGGGAGCTATTGCAAGTTCCTCAGGATCCGTGCGTaGGCCTCCACCTCTGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: GEQASVLLHPVSGSYCKFLRIRA*ASTSVA Trigger: TGCTACAGAGGTGGAGGCGCACGCACGGATCCTGAG...GAACTTGCAATAGCTCCCACTGACTGGATGCAGGAGTACCGATGCCTGCTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR GCA 90 bp | TACAGTCCAGAAGAGAGGAGGGGGCTCTCCCACAGAGGCTTGTTTGCCCAGACTAAGGTGGCCAAGGTCTaGAGCTCCTCGGTGCTAGCA | + |
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Preference number: 2 (lower is better) Translates to: YSPEERRGLSHRGLFAQTKVAKV*SSSVLA Trigger: TGCTAGCACCGAGGAGCTGCAGACCTTGGCCACCTT...AGTCTGGGCAAACAAGCCTCTGTGGGAGAGCCCCCTCCTCTCTTCTGGACTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR TCA 90 bp | ATACGAAGTCTCAGCAGCATACAGGCCTTCCTCAGGATCCGTGCGTGCGCCTCCTCTGGAGGTCTAGAGTaGGAGAAAGTAGAGGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: IRSLSSIQAFLRIRACASSGGLE*EKVEAA Trigger: GGCTGCCTCTACTTTCTCTCACTCTAGACCTCCAGA...GGAGGCGCACGCACGGATCCTGAGGAAGGCCTGTATGCTGCTGAGACTTCGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR GCA 90 bp | GCAAACGGACGAGGCCTGAGTGCGCGTCTCTGCAAGGCATTCTCCTGGAAGTTGTCTGTCACAGCTGCTTaGAGCACCTGTATCCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: ANGRGLSARLCKAFSWKLSVTAA*STCILW Trigger: CCACAGGATACAGGTGCTGCAAGCAGCTGTGACAGA...CAACTTCCAGGAGAATGCCTTGCAGAGACGCGCACTCAGGCCTCGTCCGTTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR CCA 90 bp | TATCCTGTGGAGACACTGTCCTACAACGGTCTGCAGTCCTTCCAGGGTGAGCAGAGTCTAAGAAGAGCTTaGGGGGAGGGGGAGCACCCT | + |
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Preference number: 2 (lower is better) Translates to: YPVETLSYNGLQSFQGEQSLRRA*GEGEHP Trigger: AGGGTGCTCCCCCTCCCCCCAAGCTCTTCTTAGACT...CTGCTCACCCTGGAAGGACTGCAGACCGTTGTAGGACAGTGTCTCCACAGGATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR TCA 90 bp | GGTGAGCAGGCATCGGTACTCCTGCATCCAGTCAGTGGGAGCTATTGCAAGTTCGAGACACTGCCTTCCTaGAGTCCTCAGGTAGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: GEQASVLLHPVSGSYCKFETLPS*SPQVAA Trigger: TGCAGCTACCTGAGGACTTCAGGAAGGCAGTGTCTC...GAACTTGCAATAGCTCCCACTGACTGGATGCAGGAGTACCGATGCCTGCTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR GCA 90 bp | GGGGCTCTCCCACAGAGGCTTGTTTGCCCAGACTGCTTAGTCAGCAGGGTCATCCATTCTCCTGGAAGTTaGTCTGTCACAGCTGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: GALPQRLVCPDCLVSRVIHSPGS*SVTAAC Trigger: GCAAGCAGCTGTGACAGAGCAACTTCCAGGAGAATG...GATGACCCTGCTGACTAAGCAGTCTGGGCAAACAAGCCTCTGTGGGAGAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCAGCCAAGGCGGTCCTCCAGGATCCTGGGTGTTTATCAGAGGGAGGAGTTGCAAGGCATTCTCCTaGAAGTTGCTCTGTCACAGC | + |
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Preference number: 2 (lower is better) Translates to: KASQGGPPGSWVFIRGRSCKAFS*KLLCHS Trigger: GCTGTGACAGAGCAACTTCCAGGAGAATGCCTTGCA...ACTCCTCCCTCTGATAAACACCCAGGATCCTGGAGGACCGCCTTGGCTGGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR TCA 90 bp | AGCCAAGGACTCCCCCAGGAAGGCAGAAAGCTGAGCCTGACTAAGAAGTCTAAGGGTGTGATGAGCAGATaGCGGGGTCATTTGTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: SQGLPQEGRKLSLTKKSKGVMSR*RGHLLV Trigger: GACCAACAAATGACCCCGTCATCTGCTCATCACACC...CTTAGACTTCTTAGTCAGGCTCAGCTTTCTGCCTTCCTGGGGGAGTCCTTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR GCA 90 bp | AGCTCCCCCAAACTGGAAAATCTCCCTCAATCCCTGTTCACTACAGTCCAGAAGCCTCCCCTGTGGGATTaGAGGCACTCCAAACCCCTT | + |
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Preference number: 2 (lower is better) Translates to: SSPKLENLPQSLFTTVQKPPLWD*RHSKPL Trigger: AAGGGGTTTGGAGTGCCTGCAATCCCACAGGGGAGG...CTTCTGGACTGTAGTGAACAGGGATTGAGGGAGATTTTCCAGTTTGGGGGAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
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| 3UTR-3UTR CCA 90 bp | CGCAAACGGACGAGGCCTGAGTGCGCGTCTCTGCAAGGCATTCTCCTGGAAGTTGTCATACAGGTAGTCTaGAGGTCTAGAGTGAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: RKRTRPECASLQGILLEVVIQVV*RSRVRE Trigger: TTCTCTCACTCTAGACCTCCAGACTACCTGTATGAC...AACTTCCAGGAGAATGCCTTGCAGAGACGCGCACTCAGGCCTCGTCCGTTTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR CCA 90 bp | GCAGGAGAGTCCCCTTCTCCTTTAATGCGAAGAGTTCTGTGGTGTGATGAGCAGGACGGGGTCATTTGTTaGTCCCTGAGGTCTGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: AGESPSPLMRRVLWCDEQDGVIC*SLRSGP Trigger: TGGACCAGACCTCAGGGACCAACAAATGACCCCGTC...CTGCTCATCACACCACAGAACTCTTCGCATTAAAGGAGAAGGGGACTCTCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR CAA 90 bp | TCGGTACTCCTGCATCCAGTCAGTGGGAGCTATTGCAAGTTCCTTTaGCATACGAAGTCTCAGCAGCATACAGGCCTTCCTCAGGATCCG | + |
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Preference number: 2 (lower is better) Translates to: SVLLHPVSGSYCKFL*HTKSQQHTGLPQDP Trigger: CGGATCCTGAGGAAGGCCTGTATGCTGCTGAGACTTCGTATGCAAAAGGAACTTGCAATAGCTCCCACTGACTGGATGCAGGAGTACCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR GCA 90 bp | ATCCTGTGGAGACACTGTCCTACAACGGTCTGCAGTCCTTCCAGGGTGAGCAGGGTCAGTGGGAGCTATTaGAAGTTCCTTTTGCATACG | + |
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Preference number: 2 (lower is better) Translates to: ILWRHCPTTVCSPSRVSRVSGSY*KFLLHT Trigger: CGTATGCAAAAGGAACTTGCAATAGCTCCCACTGAC...CCTGCTCACCCTGGAAGGACTGCAGACCGTTGTAGGACAGTGTCTCCACAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCCAAGGACTCCCCCAGGAAGGCAGAAAGCTGAGCCTGACTAAGAAGTCTGTCATACAGGTAGTCTaGAGGTCTAGAGTGAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: GSQGLPQEGRKLSLTKKSVIQVV*RSRVRE Trigger: TTCTCTCACTCTAGACCTCCAGACTACCTGTATGAC...AGACTTCTTAGTCAGGCTCAGCTTTCTGCCTTCCTGGGGGAGTCCTTGGCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
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| 3UTR-3UTR GCA 90 bp | TACAGTCCAGAAGAGAGGAGGGGGCTCTCCCACAGAGGCTTGTTTGCCCAGACTATTGCAAGTTCCTTTTaGATACGAAGTCTCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: YSPEERRGLSHRGLFAQTIASSF*IRSLSS Trigger: GCTGCTGAGACTTCGTATGCAAAAGGAACTTGCAAT...AGTCTGGGCAAACAAGCCTCTGTGGGAGAGCCCCCTCCTCTCTTCTGGACTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR CCA 90 bp | AGCCAAGGACTCCCCCAGGAAGGCAGAAAGCTGAGCCTGACTAAGAAGTCTAAGATAGCTCCCCCAAACTaGAAAATCTCCCTCAATCCC | + |
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Preference number: 2 (lower is better) Translates to: SQGLPQEGRKLSLTKKSKIAPPN*KISLNP Trigger: GGGATTGAGGGAGATTTTCCAGTTTGGGGGAGCTAT...CTTAGACTTCTTAGTCAGGCTCAGCTTTCTGCCTTCCTGGGGGAGTCCTTGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
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| 3UTR-3UTR CCA 90 bp | GTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCCCATTAAAGATGGTTAGTCTAAGAAGAGCTTaGGGGGAGGGGGAGCACCCT | + |
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Preference number: 2 (lower is better) Translates to: VAVFRHTRRGHQIPLKMVSLRRA*GEGEHP Trigger: AGGGTGCTCCCCCTCCCCCCAAGCTCTTCTTAGACT...AACCATCTTTAATGGGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
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| 3UTR-3UTR CCA 90 bp | GTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCCCATTAAAGATGGTTCTTCAGCCTCCCCTGTaGGATTGCAGGCACTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: VAVFRHTRRGHQIPLKMVLQPPL*DCRHSK Trigger: TTTGGAGTGCCTGCAATCCCACAGGGGAGGCTGAAG...AACCATCTTTAATGGGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
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| 3UTR-3UTR TCA 90 bp | AGCTCCCCCAAACTGGAAAATCTCCCTCAATCCCTGTTCACTACAGTCCAGAAGAGATCAAGCTGGCTTTaGACTCACAGAATCACCAGC | + |
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Preference number: 2 (lower is better) Translates to: SSPKLENLPQSLFTTVQKRSSWL*THRITS Trigger: GCTGGTGATTCTGTGAGTTCAAAGCCAGCTTGATCT...CTTCTGGACTGTAGTGAACAGGGATTGAGGGAGATTTTCCAGTTTGGGGGAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCCCATTAAAGATGGTTATGCCACCATGTGGTTGCTaGGAATTGTACTCAGGACCC | + |
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Preference number: 2 (lower is better) Translates to: AVFRHTRRGHQIPLKMVMPPCGC*ELYSGP Trigger: GGGTCCTGAGTACAATTCTCAGCAACCACATGGTGG...CATAACCATCTTTAATGGGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
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| 3UTR-3UTR CCA 90 bp | GCAAGTTCCTTTTGCATACGAAGTCTCAGCAGCATACAGGCCTTCCTCAGGATCCCCGCTGTATACCCTTaGTGGATCTTGTACCCAATA | + |
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Preference number: 2 (lower is better) Translates to: ASSFCIRSLSSIQAFLRIPAVYP*WILYPI Trigger: TATTGGGTACAAGATCCACCAAGGGTATACAGCGGG...GATCCTGAGGAAGGCCTGTATGCTGCTGAGACTTCGTATGCAAAAGGAACTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR CCA 90 bp | CAAGGACTCCCCCAGGAAGGCAGAAAGCTGAGCCTGACTAAGAAGTCTAAGAAGAGAACCTTTTCTAGATaGATCTGCTGGTGTAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: QGLPQEGRKLSLTKKSKKRTFSR*ICWCSK Trigger: CTTGCTACACCAGCAGATCCATCTAGAAAAGGTTCT...CTTCTTAGACTTCTTAGTCAGGCTCAGCTTTCTGCCTTCCTGGGGGAGTCCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR-3UTR CCA 90 bp | AGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCCCATTAAAGATGGTTATTGTACTCAGGACCCCTaGAAGAGCAGTCAGTACTCT | + |
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Preference number: 2 (lower is better) Translates to: SCLQTHQKRASDPIKDGYCTQDP*KSSQYS Trigger: AGAGTACTGACTGCTCTTCCAGGGGTCCTGAGTACA...ATAACCATCTTTAATGGGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
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| 3UTR GCA 72 bp | CTCAGCAGCATACAGGCCTTCCTCAGGATCCGTGCGTaGGCCTCCACCTCTGTAGCACTGGGCCTGTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: LSSIQAFLRIRA*ASTSVALGLWL Trigger: CAGCCACAGGCCCAGTGCTACAGAGGTGGAGGCGCACGCACGGATCCTGAGGAAGGCCTGTATGCTGCTGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR CCA 72 bp | CCTTGGGAGGGGCTGTGGCCCGCTGTATACCCTTGGTaGATCTTGTACCCAATACACGGCTGCCACCCCGGC | + |
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Preference number: 3 (lower is better) Translates to: PWEGLWPAVYPW*ILYPIHGCHPG Trigger: GCCGGGGTGGCAGCCGTGTATTGGGTACAAGATCCACCAAGGGTATACAGCGGGCCACAGCCCCTCCCAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR CCA 72 bp | CGTGCGTGCGCCTCCACCTCTGTAGCACTGGGCCTGTaGCTGGAACAGCCTGAAGCCATCTGGAGTTTGTGG | + |
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Preference number: 3 (lower is better) Translates to: RACASTSVALGL*LEQPEAIWSLW Trigger: CCACAAACTCCAGATGGCTTCAGGCTGTTCCAGCCACAGGCCCAGTGCTACAGAGGTGGAGGCGCACGCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| 3UTR TCA 72 bp | GCAGAGTCCACCTCTCCTCCGCAAACGGACGAGGCCTaGGTGCGCGTCTCTGCAAGGCATTCTCCTGGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: AESTSPPQTDEA*VRVSARHSPGS Trigger: ACTTCCAGGAGAATGCCTTGCAGAGACGCGCACTCAGGCCTCGTCCGTTTGCGGAGGAGAGGTGGACTCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| 3UTR GCA 72 bp | GGCGGCTCTAGTGGCATCTGTGGAGTCGTTGGTTCGTaGAGAGTTGAGCTGGGCCCACAGGCAGGAATTCCG | + |
|
Preference number: 3 (lower is better) Translates to: GGSSGICGVVGS*RVELGPQAGIP Trigger: CGGAATTCCTGCCTGTGGGCCCAGCTCAACTCTGCACGAACCAACGACTCCACAGATGCCACTAGAGCCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| 3UTR GCA 72 bp | AAGTCTCAGCAGCATACAGGCCTTCCTCAGGATCCGTaGGTGCGCCTCCACCTCTGTAGCACTGGGCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: KSQQHTGLPQDP*VRLHLCSTGPV Trigger: CACAGGCCCAGTGCTACAGAGGTGGAGGCGCACGCACGGATCCTGAGGAAGGCCTGTATGCTGCTGAGACTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| 3UTR GCA 72 bp | TCCTCCGCAAACGGACGAGGCCTGAGTGCGCGTCTCTaGAAGGCATTCTCCTGGAAGTTGCTCTGTCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSANGRGLSARL*KAFSWKLLCHS Trigger: GCTGTGACAGAGCAACTTCCAGGAGAATGCCTTGCAGAGACGCGCACTCAGGCCTCGTCCGTTTGCGGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| 3UTR GCA 72 bp | AGTCCACCTCTCCTCCGCAAACGGACGAGGCCTGAGTaGGCGTCTCTGCAAGGCATTCTCCTGGAAGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SPPLLRKRTRPE*ASLQGILLEVA Trigger: AGCAACTTCCAGGAGAATGCCTTGCAGAGACGCGCACTCAGGCCTCGTCCGTTTGCGGAGGAGAGGTGGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| 3UTR-3UTR CAA 90 bp | GACTGTACGCAGCCCGACACAAGGCCAGCCAAGGCGGTCCTCCAGGATCCTGGGCCCAGTAGTTTGGTCTaGTGTTCTTACATGGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: DCTQPDTRPAKAVLQDPGPSSLV*CSYMGL Trigger: AAGACCCATGTAAGAACACAAGACCAAACTACTGGG...CCCAGGATCCTGGAGGACCGCCTTGGCTGGCCTTGTGTCGGGCTGCGTACAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| 3UTR TCA 72 bp | GACACTGTCCTACAACGGTCTGCAGTCCTTCCAGGGTaGGCAGGCATCGGTACTCCTGCATCCAGTCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: DTVLQRSAVLPG*AGIGTPASSQW Trigger: CCACTGACTGGATGCAGGAGTACCGATGCCTGCTCACCCTGGAAGGACTGCAGACCGTTGTAGGACAGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| 3UTR CCA 72 bp | CGACACAAGGCCAGCCAAGGCGGTCCTCCAGGATCCTaGGTGTTTATCAGAGGGAGGAGTTCAGCCATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: RHKASQGGPPGS*VFIRGRSSAIR Trigger: TCTGATGGCTGAACTCCTCCCTCTGATAAACACCCAGGATCCTGGAGGACCGCCTTGGCTGGCCTTGTGTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| 3UTR GCA 72 bp | ACCTGTATCCTGTGGAGACACTGTCCTACAACGGTCTaGAGTCCTTCCAGGGTGAGCAGGCATCGGTACTCC | + |
|
Preference number: 3 (lower is better) Translates to: TCILWRHCPTTV*SPSRVSRHRYS Trigger: GGAGTACCGATGCCTGCTCACCCTGGAAGGACTGCAGACCGTTGTAGGACAGTGTCTCCACAGGATACAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCTCAATCCCTGTTCACTACAGTCCAGAAGAGAGGAGGGGGCTCTCCCACACTTTGTGGTCCTGGCTaGCTCTGTAGATCAAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LPQSLFTTVQKRGGGSPTLCGPG*LCRSSW Trigger: CCAGCTTGATCTACAGAGCAAGCCAGGACCACAAAG...TGTGGGAGAGCCCCCTCCTCTCTTCTGGACTGTAGTGAACAGGGATTGAGGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| 3UTR CCA 72 bp | TGCTCTGTCACAGCTGCTTGCAGCACCTGTATCCTGTaGAGACACTGTCCTACAACGGTCTGCAGTCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: CSVTAACSTCIL*RHCPTTVCSPS Trigger: GGAAGGACTGCAGACCGTTGTAGGACAGTGTCTCCACAGGATACAGGTGCTGCAAGCAGCTGTGACAGAGCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTATAGCTCCCCCAAACTGGAAAATCTCCCTCAATCCCTGTTCACTACAGTCCGCCTCCCCTGTGGGATaGCAGGCACTCCAAACCCCT | + |
|
Preference number: 3 (lower is better) Translates to: VIAPPNWKISLNPCSLQSASPVG*QALQTP Trigger: AGGGGTTTGGAGTGCCTGCAATCCCACAGGGGAGGC...GGACTGTAGTGAACAGGGATTGAGGGAGATTTTCCAGTTTGGGGGAGCTATAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| 3UTR TCA 72 bp | TGTGGTCCTGGCTTGCTCTGTAGATCAAGCTGGCTTTaGACTCACAGAATCACCAGCCTCTGCCTCCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: CGPGLLCRSSWL*THRITSLCLPP Trigger: AGGTGGGAGGCAGAGGCTGGTGATTCTGTGAGTTCAAAGCCAGCTTGATCTACAGAGCAAGCCAGGACCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| 3UTR TCA 72 bp | CACCTCTGTAGCACTGGGCCTGTGGCTGGAACAGCCTaGAGCCATCTGGAGTTTGTGGAGGAACTGAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: HLCSTGPVAGTA*SHLEFVEELSF Trigger: AAAACTCAGTTCCTCCACAAACTCCAGATGGCTTCAGGCTGTTCCAGCCACAGGCCCAGTGCTACAGAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| 3UTR GCA 72 bp | TGCAGTCCTTCCAGGGTGAGCAGGCATCGGTACTCCTaGATCCAGTCAGTGGGAGCTATTGCAAGTTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: CSPSRVSRHRYS*IQSVGAIASSF Trigger: AAAGGAACTTGCAATAGCTCCCACTGACTGGATGCAGGAGTACCGATGCCTGCTCACCCTGGAAGGACTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTATAGCTCCCCCAAACTGGAAAATCTCCCTCAATCCCTGTTCACTACAGTCCTTGGTTCGTGCAGAGTaGAGCTGGGCCCACAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VIAPPNWKISLNPCSLQSLVRAE*SWAHRQ Trigger: CTGCCTGTGGGCCCAGCTCAACTCTGCACGAACCAA...GGACTGTAGTGAACAGGGATTGAGGGAGATTTTCCAGTTTGGGGGAGCTATAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGACTCCCCCAGGAAGGCAGAAAGCTGAGCCTGACTAAGAAGTCTAAGAAGCTCTGTCACAGCTGCTaGCAGCACCTGTATCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: QGLPQEGRKLSLTKKSKKLCHSC*QHLYPV Trigger: CACAGGATACAGGTGCTGCAAGCAGCTGTGACAGAG...CTTCTTAGACTTCTTAGTCAGGCTCAGCTTTCTGCCTTCCTGGGGGAGTCCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| 3UTR GCA 72 bp | TTCCGAGACACTGCCTTCCTGAAGTCCTCAGGTAGCTaGAGGAGAGTCCCCTTCTCCTTTAATGCGAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: FRDTAFLKSSGS*RRVPFSFNAKS Trigger: ACTCTTCGCATTAAAGGAGAAGGGGACTCTCCTGCAGCTACCTGAGGACTTCAGGAAGGCAGTGTCTCGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTATAGCTCCCCCAAACTGGAAAATCTCCCTCAATCCCTGTTCACTACAGTCCGCATCTGTGGAGTCGTaGGTTCGTGCAGAGTTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: VIAPPNWKISLNPCSLQSASVES*VRAELS Trigger: GCTCAACTCTGCACGAACCAACGACTCCACAGATGC...GGACTGTAGTGAACAGGGATTGAGGGAGATTTTCCAGTTTGGGGGAGCTATAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| 3UTR CCA 72 bp | CGCAGCTTTCTCGGTGAGGTTATAGCTCCCCCAAACTaGAAAATCTCCCTCAATCCCTGTTCACTACAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: RSFLGEVIAPPN*KISLNPCSLQS Trigger: GGACTGTAGTGAACAGGGATTGAGGGAGATTTTCCAGTTTGGGGGAGCTATAACCTCACCGAGAAAGCTGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
||
| 3UTR GCA 72 bp | GCATCGGTACTCCTGCATCCAGTCAGTGGGAGCTATTaGAAGTTCCTTTTGCATACGAAGTCTCAGCAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: ASVLLHPVSGSY*KFLLHTKSQQH Trigger: ATGCTGCTGAGACTTCGTATGCAAAAGGAACTTGCAATAGCTCCCACTGACTGGATGCAGGAGTACCGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| 3UTR CCA 72 bp | GGAGAGTCCCCTTCTCCTTTAATGCGAAGAGTTCTGTaGTGTGATGAGCAGATGACGGGGTCATTTGTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GESPSPLMRRVL*CDEQMTGSFVG Trigger: ACCAACAAATGACCCCGTCATCTGCTCATCACACCACAGAACTCTTCGCATTAAAGGAGAAGGGGACTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| 3UTR TCA 72 bp | CCCATTAAAGATGGTTATGAGCCACCATGTGGTTGCTaGGAATTGTACTCAGGACCCCTGGAAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PIKDGYEPPCGC*ELYSGPLEEQS Trigger: TGACTGCTCTTCCAGGGGTCCTGAGTACAATTCTCAGCAACCACATGGTGGCTCATAACCATCTTTAATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCTCAATCCCTGTTCACTACAGTCCAGAAGAGAGGAGGGGGCTCTCCCACACCTGCAGCAGCCTCCTaGAAACGCGCAGGCTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPQSLFTTVQKRGGGSPTPAAAS*KRAGSA Trigger: AGCGGAGCCTGCGCGTTTCCAGGAGGCTGCTGCAGG...TGTGGGAGAGCCCCCTCCTCTCTTCTGGACTGTAGTGAACAGGGATTGAGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
||
| CDS-3UTR CCA 90 bp | GGCAGCCAAGGACTCCCCCAGGAAGGCAGAAAGCTGAGCCTGACTAAGAAGTCTGCTCAGGGTAATCCTTaGGAGGGGCTGTGGCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSQGLPQEGRKLSLTKKSAQGNP*EGLWPA Trigger: AGCGGGCCACAGCCCCTCCCAAGGATTACCCTGAGC...AGACTTCTTAGTCAGGCTCAGCTTTCTGCCTTCCTGGGGGAGTCCTTGGCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGGAGGGGCTGTGGCCCGCTGTATACCCTTGGTGGATCTTGTACCCAATACAGATGGGGTCCTGGCTaGTTCCCTGCAGCAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGRGCGPLYTLGGSCTQYRWGPG*FPAAAS Trigger: GGAGGCTGCTGCAGGGAACCAGCCAGGACCCCATCT...GTATTGGGTACAAGATCCACCAAGGGTATACAGCGGGCCACAGCCCCTCCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| CDS-3UTR GCA 90 bp | TACAGTCCAGAAGAGAGGAGGGGGCTCTCCCACAGAGGCTTGTTTGCCCAGACTCTCAGGATCCGTGCGTaGGCCTCCACCTCTGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YSPEERRGLSHRGLFAQTLRIRA*ASTSVA Trigger: TGCTACAGAGGTGGAGGCGCACGCACGGATCCTGAG...AGTCTGGGCAAACAAGCCTCTGTGGGAGAGCCCCCTCCTCTCTTCTGGACTGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR CCA 90 bp | GTTATAGCTCCCCCAAACTGGAAAATCTCCCTCAATCCCTGTTCACTACAGTCCGGCTGCCACCCCGGCTaGGAGCCCGAGGATGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VIAPPNWKISLNPCSLQSGCHPG*EPEDGR Trigger: CCTCCCATCCTCGGGCTCCCAGCCGGGGTGGCAGCC...GGACTGTAGTGAACAGGGATTGAGGGAGATTTTCCAGTTTGGGGGAGCTATAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGACTCCCCCAGGAAGGCAGAAAGCTGAGCCTGACTAAGAAGTCTAAGAAGTACCCAATACACGGCTaGCACCCCGGCTGGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QGLPQEGRKLSLTKKSKKYPIHG*HPGWEP Trigger: GGGCTCCCAGCCGGGGTGGCAGCCGTGTATTGGGTA...CTTCTTAGACTTCTTAGTCAGGCTCAGCTTTCTGCCTTCCTGGGGGAGTCCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGCCAAGGACTCCCCCAGGAAGGCAGAAAGCTGAGCCTGACTAAGAAGTCTAAGGTGGCCAAGGTCTaGAGCTCCTCGGTGCTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSQGLPQEGRKLSLTKKSKVAKV*SSSVLA Trigger: TGCTAGCACCGAGGAGCTGCAGACCTTGGCCACCTT...AGACTTCTTAGTCAGGCTCAGCTTTCTGCCTTCCTGGGGGAGTCCTTGGCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTCCAGAAGAGAGGAGGGGGCTCTCCCACAGAGGCTTGTTTGCCCAGACTGCCTGAAGCTTCAAGGTaGCCAAGGTCTGCAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TVQKRGGGSPTEACLPRLPEASR*PRSAAP Trigger: AGGAGCTGCAGACCTTGGCCACCTTGAAGCTTCAGG...CAGTCTGGGCAAACAAGCCTCTGTGGGAGAGCCCCCTCCTCTCTTCTGGACTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR TCA 90 bp | TACTCTTCCTTCAGCCTCCCCTGTGGGATTGCAGGCACTCCAAACCCCTTAATTTGGTTCGTGCAGAGTTaGGCTGGGCCCACAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YSSFSLPCGIAGTPNPLIWFVQS*AGPTGR Trigger: CCTGCCTGTGGGCCCAGCTCAACTCTGCACGAACCA...AATTAAGGGGTTTGGAGTGCCTGCAATCCCACAGGGGAGGCTGAAGGAAGAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR CCA 90 bp | TACAGTCCAGAAGAGAGGAGGGGGCTCTCCCACAGAGGCTTGTTTGCCCAGACTTTCTGGAACTGGAGATaGGGTCCTGGCTGGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YSPEERRGLSHRGLFAQTFWNWR*GPGWFP Trigger: TGGGAACCAGCCAGGACCCCATCTCCAGTTCCAGAA...AGTCTGGGCAAACAAGCCTCTGTGGGAGAGCCCCCTCCTCTCTTCTGGACTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR CCA 90 bp | TACAGTCCAGAAGAGAGGAGGGGGCTCTCCCACAGAGGCTTGTTTGCCCAGACTGACGGGGTCATTTGTTaGTCCCTGAGGTCTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YSPEERRGLSHRGLFAQTDGVIC*SLRSGP Trigger: TGGACCAGACCTCAGGGACCAACAAATGACCCCGTC...AGTCTGGGCAAACAAGCCTCTGTGGGAGAGCCCCCTCCTCTCTTCTGGACTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| 3UTR CAA 72 bp | CAGAAGAGAGGAGGGGGCTCTCCCACAGAGGCTTGTTaGCCCAGACTGCTTAGTCAGCAGGGTCATCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: QKRGGGSPTEAC*PRLLSQQGHLE Trigger: TTCGAGATGACCCTGCTGACTAAGCAGTCTGGGCAAACAAGCCTCTGTGGGAGAGCCCCCTCCTCTCTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| CDS-3UTR GCA 90 bp | CTTAGGATACTCTTCCTTCAGCCTCCCCTGTGGGATTGCAGGCACTCCAAACCCAAGTCCTCAGGTAGCTaGAGGAGAGTCCCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRILFLQPPLWDCRHSKPKSSGS*RRVPFS Trigger: GGAGAAGGGGACTCTCCTGCAGCTACCTGAGGACTT...GGGTTTGGAGTGCCTGCAATCCCACAGGGGAGGCTGAAGGAAGAGTATCCTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAAGGACTCCCCCAGGAAGGCAGAAAGCTGAGCCTGACTAAGAAGTCTAAGCACTGGGCCTGTGGCTaGAACAGCCTGAAGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SQGLPQEGRKLSLTKKSKHWACG*NSLKPS Trigger: AGATGGCTTCAGGCTGTTCCAGCCACAGGCCCAGTG...CTTAGACTTCTTAGTCAGGCTCAGCTTTCTGCCTTCCTGGGGGAGTCCTTGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| 3UTR CAA 72 bp | CTGAGTGCGCGTCTCTGCAAGGCATTCTCCTGGAAGTaGCTCTGTCACAGCTGCTTGCAGCACCTGTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSARLCKAFSWK*LCHSCLQHLYP Trigger: AGGATACAGGTGCTGCAAGCAGCTGTGACAGAGCAACTTCCAGGAGAATGCCTTGCAGAGACGCGCACTCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| CDS-3UTR CCA 90 bp | TTCAGGCTGGCCTTAAACTTAGGATACTCTTCCTTCAGCCTCCCCTGTGGGATTGTAGCACTGGGCCTGTaGCTGGAACAGCCTGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FRLALNLGYSSFSLPCGIVALGL*LEQPEA Trigger: GGCTTCAGGCTGTTCCAGCCACAGGCCCAGTGCTAC...AATCCCACAGGGGAGGCTGAAGGAAGAGTATCCTAAGTTTAAGGCCAGCCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTGCATACGAAGTCTCAGCAGCATACAGGCCTTCCTCAGGATCCGTGCGTGTTCTGGAACTGGAGATaGGGTCCTGGCTGGTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLHTKSQQHTGLPQDPCVFWNWR*GPGWFP Trigger: AGGGAACCAGCCAGGACCCCATCTCCAGTTCCAGAA...CACGCACGGATCCTGAGGAAGGCCTGTATGCTGCTGAGACTTCGTATGCAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| CDS-3UTR TCA 90 bp | TACTCTTCCTTCAGCCTCCCCTGTGGGATTGCAGGCACTCCAAACCCCTTAATTGAGACACTGCCTTCCTaGAGTCCTCAGGTAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YSSFSLPCGIAGTPNPLIETLPS*SPQVAA Trigger: TGCAGCTACCTGAGGACTTCAGGAAGGCAGTGTCTC...AATTAAGGGGTTTGGAGTGCCTGCAATCCCACAGGGGAGGCTGAAGGAAGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR GCA 90 bp | AAACTGGAAAATCTCCCTCAATCCCTGTTCACTACAGTCCAGAAGAGAGGAGGGGCTGGTTCCCAGACCTaGAGCAGCCTCCTGGAAACG | + |
|
Preference number: 4 (lower is better) Translates to: KLENLPQSLFTTVQKRGGAGSQT*SSLLET Trigger: CGTTTCCAGGAGGCTGCTGCAGGTCTGGGAACCAGC...CCCTCCTCTCTTCTGGACTGTAGTGAACAGGGATTGAGGGAGATTTTCCAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| 3UTR CAA 72 bp | AAGGCATTCTCCTGGAAGTTGCTCTGTCACAGCTGCTaGCAGCACCTGTATCCTGTGGAGACACTGTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: KAFSWKLLCHSC*QHLYPVETLSY Trigger: GTAGGACAGTGTCTCCACAGGATACAGGTGCTGCAAGCAGCTGTGACAGAGCAACTTCCAGGAGAATGCCTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| CDS-3UTR TCA 90 bp | GTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCCCATTAAAGATGGTTGCAGTCCTTCCAGGGTaGGCAGGCATCGGTACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VAVFRHTRRGHQIPLKMVAVLPG*AGIGTP Trigger: AGGAGTACCGATGCCTGCTCACCCTGGAAGGACTGC...AACCATCTTTAATGGGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR CCA 90 bp | TACTCTTCCTTCAGCCTCCCCTGTGGGATTGCAGGCACTCCAAACCCCTTAATTTTTGGTTTCTGGAACTaGAGATGGGGTCCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YSSFSLPCGIAGTPNPLIFGFWN*RWGPGW Trigger: CCAGCCAGGACCCCATCTCCAGTTCCAGAAACCAAA...AATTAAGGGGTTTGGAGTGCCTGCAATCCCACAGGGGAGGCTGAAGGAAGAGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR CCA 90 bp | CAAGGACTCCCCCAGGAAGGCAGAAAGCTGAGCCTGACTAAGAAGTCTAAGAAGTTTGGTTTCTGGAACTaGAGATGGGGTCCTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGLPQEGRKLSLTKKSKKFGFWN*RWGPGW Trigger: CCAGCCAGGACCCCATCTCCAGTTCCAGAAACCAAA...CTTCTTAGACTTCTTAGTCAGGCTCAGCTTTCTGCCTTCCTGGGGGAGTCCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
||
| CDS-3UTR CCA 90 bp | CTTAGGATACTCTTCCTTCAGCCTCCCCTGTGGGATTGCAGGCACTCCAAACCCTGCACATGCTGGACTTaGGTCCTCTTCTTTGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRILFLQPPLWDCRHSKPCTCWT*VLFFGF Trigger: GAAACCAAAGAAGAGGACCCAAGTCCAGCATGTGCA...GGGTTTGGAGTGCCTGCAATCCCACAGGGGAGGCTGAAGGAAGAGTATCCTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAAGGACTCCCCCAGGAAGGCAGAAAGCTGAGCCTGACTAAGAAGTCTAAGACTCGGTGCACATGCTaGACTTGGGTCCTCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SQGLPQEGRKLSLTKKSKTRCTC*TWVLFF Trigger: AAAGAAGAGGACCCAAGTCCAGCATGTGCACCGAGT...CTTAGACTTCTTAGTCAGGCTCAGCTTTCTGCCTTCCTGGGGGAGTCCTTGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
||
| CDS-3UTR GCA 90 bp | TACTCTTCCTTCAGCCTCCCCTGTGGGATTGCAGGCACTCCAAACCCCTTAATTCATTCTCCTGGAAGTTaGTCTGTCACAGCTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YSSFSLPCGIAGTPNPLIHSPGS*SVTAAC Trigger: GCAAGCAGCTGTGACAGAGCAACTTCCAGGAGAATG...AATTAAGGGGTTTGGAGTGCCTGCAATCCCACAGGGGAGGCTGAAGGAAGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCCCATTAAAGATGGTTATGCGTGCAGAGTTGAGCTaGGCCCACAGGCAGGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: AVFRHTRRGHQIPLKMVMRAELS*AHRQEF Trigger: GAATTCCTGCCTGTGGGCCCAGCTCAACTCTGCACG...CATAACCATCTTTAATGGGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| 3UTR CAA 72 bp | GGCATCGGTACTCCTGCATCCAGTCAGTGGGAGCTATaGCAAGTTCCTTTTGCATACGAAGTCTCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GIGTPASSQWEL*QVPFAYEVSAA Trigger: TGCTGCTGAGACTTCGTATGCAAAAGGAACTTGCAATAGCTCCCACTGACTGGATGCAGGAGTACCGATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| CDS-3UTR TCA 90 bp | GTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCCCATTAAAGATGGTTGTGGCTGGAACAGCCTaGAGCCATCTGGAGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VAVFRHTRRGHQIPLKMVVAGTA*SHLEFV Trigger: CACAAACTCCAGATGGCTTCAGGCTGTTCCAGCCAC...AACCATCTTTAATGGGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR GCA 90 bp | GTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCCCATTAAAGATGGTTCTGAGTGCGCGTCTCTaGAAGGCATTCTCCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VAVFRHTRRGHQIPLKMVLSARL*KAFSWK Trigger: CTTCCAGGAGAATGCCTTGCAGAGACGCGCACTCAG...AACCATCTTTAATGGGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR CCA 90 bp | TCGGTACTCCTGCATCCAGTCAGTGGGAGCTATTGCAAGTTCCTTTTGCATACGACTCGGTGCACATGCTaGACTTGGGTCCTCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVLLHPVSGSYCKFLLHTTRCTC*TWVLFF Trigger: AAAGAAGAGGACCCAAGTCCAGCATGTGCACCGAGT...CGTATGCAAAAGGAACTTGCAATAGCTCCCACTGACTGGATGCAGGAGTACCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| CDS-3UTR CCA 90 bp | TTCAGGCTGGCCTTAAACTTAGGATACTCTTCCTTCAGCCTCCCCTGTGGGATTTGCAAGGCATTCTCCTaGAAGTTGCTCTGTCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: FRLALNLGYSSFSLPCGICKAFS*KLLCHS Trigger: GCTGTGACAGAGCAACTTCCAGGAGAATGCCTTGCA...AATCCCACAGGGGAGGCTGAAGGAAGAGTATCCTAAGTTTAAGGCCAGCCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCTAGTGTCATACAGGTAGTCTGGAGGTCTAGAGTGAGAGAAAGTAGAGGCGGTCCTCCAGGATCCTaGGTGTTTATCAGAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSSVIQVVWRSRVRESRGGPPGS*VFIRGR Trigger: CCTCCCTCTGATAAACACCCAGGATCCTGGAGGACC...GCCTCTACTTTCTCTCACTCTAGACCTCCAGACTACCTGTATGACACTAGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| 3UTR CAA 72 bp | CTGCATCCAGTCAGTGGGAGCTATTGCAAGTTCCTTTaGCATACGAAGTCTCAGCAGCATACAGGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHPVSGSYCKFL*HTKSQQHTGLP Trigger: AGGAAGGCCTGTATGCTGCTGAGACTTCGTATGCAAAAGGAACTTGCAATAGCTCCCACTGACTGGATGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| CDS-3UTR TCA 90 bp | GCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCCCATTAAAGATGGTTATGGGTGTGATGAGCAGATaGCGGGGTCATTTGTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AVFRHTRRGHQIPLKMVMGVMSR*RGHLLV Trigger: GACCAACAAATGACCCCGTCATCTGCTCATCACACC...CATAACCATCTTTAATGGGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR GCA 90 bp | GTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCCCATTAAAGATGGTTTCTGTCACAGCTGCTTaGAGCACCTGTATCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VAVFRHTRRGHQIPLKMVSVTAA*STCILW Trigger: CCACAGGATACAGGTGCTGCAAGCAGCTGTGACAGA...AACCATCTTTAATGGGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR CCA 90 bp | AGCTCCCCCAAACTGGAAAATCTCCCTCAATCCCTGTTCACTACAGTCCAGAAGTGCACATGCTGGACTTaGGTCCTCTTCTTTGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSPKLENLPQSLFTTVQKCTCWT*VLFFGF Trigger: GAAACCAAAGAAGAGGACCCAAGTCCAGCATGTGCA...CTTCTGGACTGTAGTGAACAGGGATTGAGGGAGATTTTCCAGTTTGGGGGAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
||
| CDS-3UTR CCA 90 bp | CAAGGACTCCCCCAGGAAGGCAGAAAGCTGAGCCTGACTAAGAAGTCTAAGAAGGCTGTATACCCTTGGTaGATCTTGTACCCAATACAC | + |
|
Preference number: 4 (lower is better) Translates to: QGLPQEGRKLSLTKKSKKAVYPW*ILYPIH Trigger: GTGTATTGGGTACAAGATCCACCAAGGGTATACAGC...CTTCTTAGACTTCTTAGTCAGGCTCAGCTTTCTGCCTTCCTGGGGGAGTCCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAAGGACTCCCCCAGGAAGGCAGAAAGCTGAGCCTGACTAAGAAGTCTAAGCCATACCCAGTAGTTTaGTCTTGTGTTCTTACATGG | + |
|
Preference number: 4 (lower is better) Translates to: SQGLPQEGRKLSLTKKSKPYPVV*SCVLTW Trigger: CCATGTAAGAACACAAGACCAAACTACTGGGTATGG...CTTAGACTTCTTAGTCAGGCTCAGCTTTCTGCCTTCCTGGGGGAGTCCTTGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR CCA 90 bp | GTTATAGCTCCCCCAAACTGGAAAATCTCCCTCAATCCCTGTTCACTACAGTCCCCTGCATCCAGTCAGTaGGAGCTATTGCAAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VIAPPNWKISLNPCSLQSPASSQ*ELLQVP Trigger: AGGAACTTGCAATAGCTCCCACTGACTGGATGCAGG...GGACTGTAGTGAACAGGGATTGAGGGAGATTTTCCAGTTTGGGGGAGCTATAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR CCA 90 bp | GTTATAGCTCCCCCAAACTGGAAAATCTCCCTCAATCCCTGTTCACTACAGTCCATGCGAAGAGTTCTGTaGTGTGATGAGCAGATGACG | + |
|
Preference number: 4 (lower is better) Translates to: VIAPPNWKISLNPCSLQSMRRVL*CDEQMT Trigger: CGTCATCTGCTCATCACACCACAGAACTCTTCGCAT...GGACTGTAGTGAACAGGGATTGAGGGAGATTTTCCAGTTTGGGGGAGCTATAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR GCA 90 bp | TTCAGGCTGGCCTTAAACTTAGGATACTCTTCCTTCAGCCTCCCCTGTGGGATTATTGCAAGTTCCTTTTaGATACGAAGTCTCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FRLALNLGYSSFSLPCGIIASSF*IRSLSS Trigger: GCTGCTGAGACTTCGTATGCAAAAGGAACTTGCAAT...AATCCCACAGGGGAGGCTGAAGGAAGAGTATCCTAAGTTTAAGGCCAGCCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCTAGTGTCATACAGGTAGTCTGGAGGTCTAGAGTGAGAGAAAGTAGAGGCCTCTTCTTTGGTTTCTaGAACTGGAGATGGGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSVIQVVWRSRVRESRGLFFGF*NWRWGP Trigger: AGGACCCCATCTCCAGTTCCAGAAACCAAAGAAGAG...GCCTCTACTTTCTCTCACTCTAGACCTCCAGACTACCTGTATGACACTAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
||
| CDS-3UTR CCA 90 bp | AGTTCTAGTGTCATACAGGTAGTCTGGAGGTCTAGAGTGAGAGAAAGTAGAGGCCCCGCTGTATACCCTTaGTGGATCTTGTACCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: SSSVIQVVWRSRVRESRGPAVYP*WILYPI Trigger: TATTGGGTACAAGATCCACCAAGGGTATACAGCGGG...GCCTCTACTTTCTCTCACTCTAGACCTCCAGACTACCTGTATGACACTAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCTAGTGTCATACAGGTAGTCTGGAGGTCTAGAGTGAGAGAAAGTAGAGGCGTCAGTGGGAGCTATTaGAAGTTCCTTTTGCATACG | + |
|
Preference number: 4 (lower is better) Translates to: SSSVIQVVWRSRVRESRGVSGSY*KFLLHT Trigger: CGTATGCAAAAGGAACTTGCAATAGCTCCCACTGAC...GCCTCTACTTTCTCTCACTCTAGACCTCCAGACTACCTGTATGACACTAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR CCA 90 bp | CCCTGTGGGATTGCAGGCACTCCAAACCCCTTAATTGATACAAGTCTTTTCATTAGAACCTTTTCTAGATaGATCTGCTGGTGTAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PCGIAGTPNPLIDTSLFIRTFSR*ICWCSK Trigger: CTTGCTACACCAGCAGATCCATCTAGAAAAGGTTCT...AATGAAAAGACTTGTATCAATTAAGGGGTTTGGAGTGCCTGCAATCCCACAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS GCA 90 bp | TGCAGCAGCCTCCTGGAAACGCGCAGGCTCCGCTCCAACTGCCGCTaGCGATCGGCGCAGGAGTCCAAGGCGCCCTGCAGCTCCGCTACC | + |
|
Preference number: 5 (lower is better) Translates to: CSSLLETRRLRSNCR*RSAQESKAPCSSAT Trigger: GGTAGCGGAGCTGCAGGGCGCCTTGGACTCCTGCGCCGATCGGCAGCGGCAGTTGGAGCGGAGCCTGCGCGTTTCCAGGAGGCTGCTGCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
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| CDS GCA 90 bp | CAGACCTGCAGCAGCCTCCTGGAAACGCGCAGGCTCCGCTCCAACTaGCGCTGCCGATCGGCGCAGGAGTCCAAGGCGCCCTGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QTCSSLLETRRLRSN*RCRSAQESKAPCSS Trigger: GGAGCTGCAGGGCGCCTTGGACTCCTGCGCCGATCGGCAGCGGCAGTTGGAGCGGAGCCTGCGCGTTTCCAGGAGGCTGCTGCAGGTCTG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
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| CDS GCA 90 bp | GTTCCCTGCAGCAGCCTCCTGGAAACGCGCAGGCTCCGCTCCAACTaGCGCTGCCGATCGGCGCAGGAGTCCAAGGCGCCCTGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VPCSSLLETRRLRSN*RCRSAQESKAPCSS Trigger: GGAGCTGCAGGGCGCCTTGGACTCCTGCGCCGATCGGCAGCGGCAGTTGGAGCGGAGCCTGCGCGTTTCCAGGAGGCTGCTGCAGGGAAC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| CDS CCA 90 bp | TGGGTCCTCTTCTTTGGTTTCTGGAACTGGAGATGGGGTCCTGGCTaGTTCCCAGACCTGCAGCAGCCTCCTGGAAACGCGCAGGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: WVLFFGFWNWRWGPG*FPDLQQPPGNAQAP Trigger: CGGAGCCTGCGCGTTTCCAGGAGGCTGCTGCAGGTCTGGGAACCAGCCAGGACCCCATCTCCAGTTCCAGAAACCAAAGAAGAGGACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
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| CDS CCA 90 bp | TGGGTCCTCTTCTTTGGTTTCTGGAACTGGAGATGGGGTCCTGGCTaGTTCCCTGCAGCAGCCTCCTGGAAACGCGCAGGCTCCGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WVLFFGFWNWRWGPG*FPAAASWKRAGSAP Trigger: TGGAGCGGAGCCTGCGCGTTTCCAGGAGGCTGCTGCAGGGAACCAGCCAGGACCCCATCTCCAGTTCCAGAAACCAAAGAAGAGGACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| CDS CCA 90 bp | GACTTGGGTCCTCTTCTTTGGTTTCTGGAACTGGAGATGGGGTCCTaGCTGGTTCCCAGACCTGCAGCAGCCTCCTGGAAACGCGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: DLGPLLWFLELEMGS*LVPRPAAASWKRAG Trigger: GCCTGCGCGTTTCCAGGAGGCTGCTGCAGGTCTGGGAACCAGCCAGGACCCCATCTCCAGTTCCAGAAACCAAAGAAGAGGACCCAAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
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| CDS CCA 90 bp | CGGTGCACATGCTGGACTTGGGTCCTCTTCTTTGGTTTCTGGAACTaGAGATGGGGTCCTGGCTGGTTCCCAGACCTGCAGCAGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RCTCWTWVLFFGFWN*RWGPGWFPDLQQPP Trigger: AGGAGGCTGCTGCAGGTCTGGGAACCAGCCAGGACCCCATCTCCAGTTCCAGAAACCAAAGAAGAGGACCCAAGTCCAGCATGTGCACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
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| CDS CCA 90 bp | ACATGCTGGACTTGGGTCCTCTTCTTTGGTTTCTGGAACTGGAGATaGGGTCCTGGCTGGTTCCCTGCAGCAGCCTCCTGGAAACGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: TCWTWVLFFGFWNWR*GPGWFPAAASWKRA Trigger: TGCGCGTTTCCAGGAGGCTGCTGCAGGGAACCAGCCAGGACCCCATCTCCAGTTCCAGAAACCAAAGAAGAGGACCCAAGTCCAGCATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| CDS CCA 90 bp | CGGTGCACATGCTGGACTTGGGTCCTCTTCTTTGGTTTCTGGAACTaGAGATGGGGTCCTGGCTGGTTCCCTGCAGCAGCCTCCTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RCTCWTWVLFFGFWN*RWGPGWFPAAASWK Trigger: TTTCCAGGAGGCTGCTGCAGGGAACCAGCCAGGACCCCATCTCCAGTTCCAGAAACCAAAGAAGAGGACCCAAGTCCAGCATGTGCACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| CDS CCA 90 bp | AGAACTCGGTGCACATGCTGGACTTGGGTCCTCTTCTTTGGTTTCTaGAACTGGAGATGGGGTCCTGGCTGGTTCCCTGCAGCAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RTRCTCWTWVLFFGF*NWRWGPGWFPAAAS Trigger: GGAGGCTGCTGCAGGGAACCAGCCAGGACCCCATCTCCAGTTCCAGAAACCAAAGAAGAGGACCCAAGTCCAGCATGTGCACCGAGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| CDS CCA 90 bp | ACATGCTGGACTTGGGTCCTCTTCTTTGGTTTCTGGAACTGGAGATaGGGTCCTGGCTGGTTCCCAGACCTGCAGCAGCCTCCTGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TCWTWVLFFGFWNWR*GPGWFPDLQQPPGN Trigger: GTTTCCAGGAGGCTGCTGCAGGTCTGGGAACCAGCCAGGACCCCATCTCCAGTTCCAGAAACCAAAGAAGAGGACCCAAGTCCAGCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
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| CDS-3UTR CAA 90 bp | TACAGTCCAGAAGAGAGGAGGGGGCTCTCCCACAGAGGCTTGTTTGCCCAGACTCAGCTCCTCGAGATCTaGAGAACTCGGTGCACATGC | + |
|
Preference number: 5 (lower is better) Translates to: YSPEERRGLSHRGLFAQTQLLEI*RTRCTC Trigger: GCATGTGCACCGAGTTCTCAAGATCTCGAGGAGCTG...AGTCTGGGCAAACAAGCCTCTGTGGGAGAGCCCCCTCCTCTCTTCTGGACTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
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| CDS CCA 90 bp | TTCCAGCTCCTCGAGATCTTGAGAACTCGGTGCACATGCTGGACTTaGGTCCTCTTCTTTGGTTTCTGGAACTGGAGATGGGGTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FQLLEILRTRCTCWT*VLFFGFWNWRWGPG Trigger: GCCAGGACCCCATCTCCAGTTCCAGAAACCAAAGAAGAGGACCCAAGTCCAGCATGTGCACCGAGTTCTCAAGATCTCGAGGAGCTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
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| CDS-3UTR CAA 90 bp | AAGGCCAGCCAAGGCGGTCCTCCAGGATCCTGGGTGTTTATCAGAGGGAGGAGTCTTGGGTCCTCTTCTTaGGTTTCTGGAACTGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: KASQGGPPGSWVFIRGRSLGSSS*VSGTGD Trigger: ATCTCCAGTTCCAGAAACCAAAGAAGAGGACCCAAG...ACTCCTCCCTCTGATAAACACCCAGGATCCTGGAGGACCGCCTTGGCTGGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| CDS-3UTR CAA 90 bp | GGCAGCCAAGGACTCCCCCAGGAAGGCAGAAAGCTGAGCCTGACTAAGAAGTCTCTTGGGTCCTCTTCTTaGGTTTCTGGAACTGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GSQGLPQEGRKLSLTKKSLGSSS*VSGTGD Trigger: ATCTCCAGTTCCAGAAACCAAAGAAGAGGACCCAAG...AGACTTCTTAGTCAGGCTCAGCTTTCTGCCTTCCTGGGGGAGTCCTTGGCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
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| CDS GCA 90 bp | AGCCTGGGTCAAAAGTTCCAGCTCCTCGAGATCTTGAGAACTCGGTaGACATGCTGGACTTGGGTCCTCTTCTTTGGTTTCTGGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLGQKFQLLEILRTR*TCWTWVLFFGFWNW Trigger: CCAGTTCCAGAAACCAAAGAAGAGGACCCAAGTCCAGCATGTGCACCGAGTTCTCAAGATCTCGAGGAGCTGGAACTTTTGACCCAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
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| CDS-3UTR CAA 90 bp | AGTTCTAGTGTCATACAGGTAGTCTGGAGGTCTAGAGTGAGAGAAAGTAGAGGCTTGGTTCGTGCAGAGTaGAGCTGGGCCCACAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSVIQVVWRSRVRESRGLVRAE*SWAHRQ Trigger: CTGCCTGTGGGCCCAGCTCAACTCTGCACGAACCAA...GCCTCTACTTTCTCTCACTCTAGACCTCCAGACTACCTGTATGACACTAGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS GCA 90 bp | GGTCAAAAGTTCCAGCTCCTCGAGATCTTGAGAACTCGGTGCACATaGTGGACTTGGGTCCTCTTCTTTGGTTTCTGGAACTGGAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: GQKFQLLEILRTRCT*WTWVLFFGFWNWRW Trigger: CCATCTCCAGTTCCAGAAACCAAAGAAGAGGACCCAAGTCCAGCATGTGCACCGAGTTCTCAAGATCTCGAGGAGCTGGAACTTTTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
||
| CDS CCA 90 bp | CAAAAGTTCCAGCTCCTCGAGATCTTGAGAACTCGGTGCACATGCTaGACTTGGGTCCTCTTCTTTGGTTTCTGGAACTGGAGATGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QKFQLLEILRTRCTC*TWVLFFGFWNWRWG Trigger: ACCCCATCTCCAGTTCCAGAAACCAAAGAAGAGGACCCAAGTCCAGCATGTGCACCGAGTTCTCAAGATCTCGAGGAGCTGGAACTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
||
| CDS-3UTR CAA 90 bp | GTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCCCATTAAAGATGGTTCTCTGTCACAGCTGCTaGCAGCACCTGTATCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VAVFRHTRRGHQIPLKMVLCHSC*QHLYPV Trigger: CACAGGATACAGGTGCTGCAAGCAGCTGTGACAGAG...AACCATCTTTAATGGGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS-3UTR CAA 90 bp | AAACTGGAAAATCTCCCTCAATCCCTGTTCACTACAGTCCAGAAGAGAGGAGGGCCCAGTAGTTTGGTCTaGTGTTCTTACATGGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KLENLPQSLFTTVQKRGGPSSLV*CSYMGL Trigger: AAGACCCATGTAAGAACACAAGACCAAACTACTGGG...CCCTCCTCTCTTCTGGACTGTAGTGAACAGGGATTGAGGGAGATTTTCCAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS GCA 72 bp | CTCCTGGAAACGCGCAGGCTCCGCTCCAACTGCCGCTaGCGATCGGCGCAGGAGTCCAAGGCGCCCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLETRRLRSNCR*RSAQESKAPCS Trigger: GCTGCAGGGCGCCTTGGACTCCTGCGCCGATCGGCAGCGGCAGTTGGAGCGGAGCCTGCGCGTTTCCAGGAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
||
| CDS GCA 72 bp | AGCAGCCTCCTGGAAACGCGCAGGCTCCGCTCCAACTaGCGCTGCCGATCGGCGCAGGAGTCCAAGGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SSLLETRRLRSN*RCRSAQESKAP Trigger: GGGCGCCTTGGACTCCTGCGCCGATCGGCAGCGGCAGTTGGAGCGGAGCCTGCGCGTTTCCAGGAGGCTGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
||
| CDS CCA 72 bp | CCTCTTCTTTGGTTTCTGGAACTGGAGATGGGGTCCTaGCTGGTTCCCTGCAGCAGCCTCCTGGAAACGCGC | + |
|
Preference number: 6 (lower is better) Translates to: PLLWFLELEMGS*LVPCSSLLETR Trigger: GCGCGTTTCCAGGAGGCTGCTGCAGGGAACCAGCCAGGACCCCATCTCCAGTTCCAGAAACCAAAGAAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
||
| CDS CCA 72 bp | TTCTTTGGTTTCTGGAACTGGAGATGGGGTCCTGGCTaGTTCCCAGACCTGCAGCAGCCTCCTGGAAACGCG | + |
|
Preference number: 6 (lower is better) Translates to: FFGFWNWRWGPG*FPDLQQPPGNA Trigger: CGCGTTTCCAGGAGGCTGCTGCAGGTCTGGGAACCAGCCAGGACCCCATCTCCAGTTCCAGAAACCAAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
||
| CDS CCA 72 bp | ACTTGGGTCCTCTTCTTTGGTTTCTGGAACTGGAGATaGGGTCCTGGCTGGTTCCCTGCAGCAGCCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: TWVLFFGFWNWR*GPGWFPAAASW Trigger: CCAGGAGGCTGCTGCAGGGAACCAGCCAGGACCCCATCTCCAGTTCCAGAAACCAAAGAAGAGGACCCAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| CDS CCA 72 bp | CCTCTTCTTTGGTTTCTGGAACTGGAGATGGGGTCCTaGCTGGTTCCCAGACCTGCAGCAGCCTCCTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: PLLWFLELEMGS*LVPRPAAASWK Trigger: TTTCCAGGAGGCTGCTGCAGGTCTGGGAACCAGCCAGGACCCCATCTCCAGTTCCAGAAACCAAAGAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
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| CDS CCA 72 bp | ACTTGGGTCCTCTTCTTTGGTTTCTGGAACTGGAGATaGGGTCCTGGCTGGTTCCCAGACCTGCAGCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: TWVLFFGFWNWR*GPGWFPDLQQP Trigger: AGGCTGCTGCAGGTCTGGGAACCAGCCAGGACCCCATCTCCAGTTCCAGAAACCAAAGAAGAGGACCCAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
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| CDS CAA 90 bp | GCTGCCTTAGATGTCAGAGTGGGGGTTCTGTCTCTTTGTCCAGCATaGGACACGCCTTTCCTCACACGTACAGCCTTCTCCAGAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: AALDVRVGVLSLCPA*DTPFLTRTAFSRAW Trigger: CCAGGCTCTGGAGAAGGCTGTACGTGTGAGGAAAGGCGTGTCCAATGCTGGACAAAGAGACAGAACCCCCACTCTGACATCTAAGGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
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| CDS CCA 72 bp | TGCACATGCTGGACTTGGGTCCTCTTCTTTGGTTTCTaGAACTGGAGATGGGGTCCTGGCTGGTTCCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: CTCWTWVLFFGF*NWRWGPGWFPA Trigger: TGCAGGGAACCAGCCAGGACCCCATCTCCAGTTCCAGAAACCAAAGAAGAGGACCCAAGTCCAGCATGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124557.3 |
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| CDS CAA 72 bp | GAACTCGGTGCACATGCTGGACTTGGGTCCTCTTCTTaGGTTTCTGGAACTGGAGATGGGGTCCTGGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: ELGAHAGLGSSS*VSGTGDGVLAG Trigger: ACCAGCCAGGACCCCATCTCCAGTTCCAGAAACCAAAGAAGAGGACCCAAGTCCAGCATGTGCACCGAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
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| CDS CAA 90 bp | GTTCCAGCTCCTCGAGATCTTGAGAACTCGGTGCACATGCTGGACTaGGGTCCTCTTCTTTGGTTTCTGGAACTGGAGATGGGGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: VPAPRDLENSVHMLD*GPLLWFLELEMGSW Trigger: CCAGGACCCCATCTCCAGTTCCAGAAACCAAAGAAGAGGACCCAAGTCCAGCATGTGCACCGAGTTCTCAAGATCTCGAGGAGCTGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
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| CDS TCA 72 bp | AGAGCCTGGGTCAAAAGTTCCAGCTCCTCGAGATCTTaGGAACTCGGTGCACATGCTGGACTTGGGTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: RAWVKSSSSSRS*ELGAHAGLGSS Trigger: AGAGGACCCAAGTCCAGCATGTGCACCGAGTTCTCAAGATCTCGAGGAGCTGGAACTTTTGACCCAGGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
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| CDS CAA 72 bp | GATGTCAGAGTGGGGGTTCTGTCTCTTTGTCCAGCATaGGACACGCCTTTCCTCACACGTACAGCCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: DVRVGVLSLCPA*DTPFLTRTAFS Trigger: GGAGAAGGCTGTACGTGTGAGGAAAGGCGTGTCCAATGCTGGACAAAGAGACAGAACCCCCACTCTGACATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
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| CDS CAA 72 bp | GGCTGCCTTAGATGTCAGAGTGGGGGTTCTGTCTCTTaGTCCAGCATTGGACACGCCTTTCCTCACACGTAC | + |
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Preference number: 6 (lower is better) Translates to: GCLRCQSGGSVS*SSIGHAFPHTY Trigger: GTACGTGTGAGGAAAGGCGTGTCCAATGCTGGACAAAGAGACAGAACCCCCACTCTGACATCTAAGGCAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024930.8 |
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| CDS CCA 72 bp | CAGCTCCTCGAGATCTTGAGAACTCGGTGCACATGCTaGACTTGGGTCCTCTTCTTTGGTTTCTGGAACTGG | + |
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Preference number: 6 (lower is better) Translates to: QLLEILRTRCTC*TWVLFFGFWNW Trigger: CCAGTTCCAGAAACCAAAGAAGAGGACCCAAGTCCAGCATGTGCACCGAGTTCTCAAGATCTCGAGGAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
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| CDS CCA 72 bp | ATGTCAGAGTGGGGGTTCTGTCTCTTTGTCCAGCATTaGACACGCCTTTCCTCACACGTACAGCCTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: MSEWGFCLFVQH*TRLSSHVQPSP Trigger: TGGAGAAGGCTGTACGTGTGAGGAAAGGCGTGTCCAATGCTGGACAAAGAGACAGAACCCCCACTCTGACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
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| CDS GCA 72 bp | TTCCAGCTCCTCGAGATCTTGAGAACTCGGTGCACATaGTGGACTTGGGTCCTCTTCTTTGGTTTCTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: FQLLEILRTRCT*WTWVLFFGFWN Trigger: GTTCCAGAAACCAAAGAAGAGGACCCAAGTCCAGCATGTGCACCGAGTTCTCAAGATCTCGAGGAGCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
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| CDS CCA 72 bp | CTCGAGATCTTGAGAACTCGGTGCACATGCTGGACTTaGGTCCTCTTCTTTGGTTTCTGGAACTGGAGATGG | + |
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Preference number: 6 (lower is better) Translates to: LEILRTRCTCWT*VLFFGFWNWRW Trigger: CCATCTCCAGTTCCAGAAACCAAAGAAGAGGACCCAAGTCCAGCATGTGCACCGAGTTCTCAAGATCTCGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
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| CDS CAA 72 bp | CCTCGAGATCTTGAGAACTCGGTGCACATGCTGGACTaGGGTCCTCTTCTTTGGTTTCTGGAACTGGAGATG | + |
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Preference number: 6 (lower is better) Translates to: PRDLENSVHMLD*GPLLWFLELEM Trigger: CATCTCCAGTTCCAGAAACCAAAGAAGAGGACCCAAGTCCAGCATGTGCACCGAGTTCTCAAGATCTCGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
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| CDS GCA 72 bp | CAAAAGTTCCAGCTCCTCGAGATCTTGAGAACTCGGTaGACATGCTGGACTTGGGTCCTCTTCTTTGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: QKFQLLEILRTR*TCWTWVLFFGF Trigger: GAAACCAAAGAAGAGGACCCAAGTCCAGCATGTGCACCGAGTTCTCAAGATCTCGAGGAGCTGGAACTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024930.8 ENSMUST00000124557.3 |
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