Pregenerated sensors for TECTB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024979Ensembl transcript IDs: ENSMUST00000025936.12, ENSMUST00000120936.8, ENSMUST00000124545.2, ENSMUST00000154886.8
Found 145 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCTCACAGGATTGGTGTGTTCACTTGGCTTCTCATTGCCAAATGTaGCCTACGGACGTTGGCATGCTCTGGGTCACAGGGGTGGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: LSQDWCVHLASHCQM*PTDVGMLWVTGVAS Trigger: ACTGGCCACCCCTGTGACCCAGAGCATGCCAACGTCCGTAGGTCACATTTGGCAATGAGAAGCCAAGTGAACACACCAATCCTGTGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR CCA 90 bp | GCCAAATGTGACCTACGGACGTTGGCATGCTCTGGGTCACAGGGGTaGCCAGTTCTGAGAGTGTGCTGTCATGTGATGTCATTGACTGTG | + |
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Preference number: 1 (lower is better) Translates to: AKCDLRTLACSGSQG*PVLRVCCHVMSLTV Trigger: CACAGTCAATGACATCACATGACAGCACACTCTCAGAACTGGCCACCCCTGTGACCCAGAGCATGCCAACGTCCGTAGGTCACATTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR CCA 90 bp | GGCTCTGAGGCAGAGGTTCACCAAATTCACATCCACACACAAACATaGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGC | + |
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Preference number: 1 (lower is better) Translates to: GSEAEVHQIHIHTQT*GNTYLAKGCSQLPS Trigger: GCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGTGTGGATGTGAATTTGGTGAACCTCTGCCTCAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR CCA 90 bp | TTCACCAAATTCACATCCACACACAAACATGGGGGAACACATATTTaGCAAAGGGCTGTTCCCAGCTCCCCAGCCATGCAGTCTTCTGTC | + |
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Preference number: 1 (lower is better) Translates to: FTKFTSTHKHGGTHI*QRAVPSSPAMQSSV Trigger: GACAGAAGACTGCATGGCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGTGTGGATGTGAATTTGGTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR CCA 90 bp | CTGTCATACCACAGCTCATGCTCTCACAGGATTGGTGTGTTCACTTaGCTTCTCATTGCCAAATGTGACCTACGGACGTTGGCATGCTCT | + |
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Preference number: 1 (lower is better) Translates to: LSYHSSCSHRIGVFT*LLIAKCDLRTLACS Trigger: AGAGCATGCCAACGTCCGTAGGTCACATTTGGCAATGAGAAGCCAAGTGAACACACCAATCCTGTGAGAGCATGAGCTGTGGTATGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR GCA 90 bp | GCCAGTTCTGAGAGTGTGCTGTCATGTGATGTCATTGACTGTGTATaGATTACATTTCTGATGAGTGGATGGTTCAGTCCCCACAGTCAC | + |
|
Preference number: 1 (lower is better) Translates to: ASSESVLSCDVIDCV*ITFLMSGWFSPHSH Trigger: GTGACTGTGGGGACTGAACCATCCACTCATCAGAAATGTAATGCATACACAGTCAATGACATCACATGACAGCACACTCTCAGAACTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR CCA 90 bp | AAATATATTGTATTTAACTTGGACTTCCACATCGTGGTTGAAGACTaGAACTTCCTGCCTGGGGGCTCGATGCTGGTCCTTAGAACTGTA | + |
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Preference number: 1 (lower is better) Translates to: KYIVFNLDFHIVVED*NFLPGGSMLVLRTV Trigger: TACAGTTCTAAGGACCAGCATCGAGCCCCCAGGCAGGAAGTTCCAGTCTTCAACCACGATGTGGAAGTCCAAGTTAAATACAATATATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR TCA 90 bp | TGTCTGTCTCTGCCTCCAAATGTTAAGCTGCATGTGATGAGTGTGTaGGAGTCTTTTATAATGAAAGTAGCTTCCAAATGCTGCTCTAAT | + |
|
Preference number: 1 (lower is better) Translates to: CLSLPPNVKLHVMSV*ESFIMKVASKCCSN Trigger: ATTAGAGCAGCATTTGGAAGCTACTTTCATTATAAAAGACTCTCACACACTCATCACATGCAGCTTAACATTTGGAGGCAGAGACAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR TCA 90 bp | GATCAAGAAAGCAGGTTTTCTGTAATTCTCAGCTACAACAAACTCTaGCGTTACATTAGGAAGTGGTTCCAAACTGATTGGAGCATGAAC | + |
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Preference number: 1 (lower is better) Translates to: DQESRFSVILSYNKL*RYIRKWFQTDWSMN Trigger: GTTCATGCTCCAATCAGTTTGGAACCACTTCCTAATGTAACGTCAGAGTTTGTTGTAGCTGAGAATTACAGAAAACCTGCTTTCTTGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR TCA 90 bp | CAAAGACCTATAAGCTTGGCTATATGTGTGCTTCGTAAGAGTTCCTaGCTAGGATCAAGAAAGCAGGTTTTCTGTAATTCTCAGCTACAA | + |
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Preference number: 1 (lower is better) Translates to: QRPISLAICVLRKSS*LGSRKQVFCNSQLQ Trigger: TTGTAGCTGAGAATTACAGAAAACCTGCTTTCTTGATCCTAGTCAGGAACTCTTACGAAGCACACATATAGCCAAGCTTATAGGTCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR CAA 90 bp | CCCACCATCCTGACAGGAAGACTTCCAAGAGCACACACTAGGCTATaGAACGCACAGGGCACCACAGGTGTGAGGGAAGCTCGGCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: PTILTGRLPRAHTRL*NAQGTTGVREARLS Trigger: TGAGAGCCGAGCTTCCCTCACACCTGTGGTGCCCTGTGCGTTCAATAGCCTAGTGTGTGCTCTTGGAAGTCTTCCTGTCAGGATGGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR CAA 90 bp | GGTGTGTTCACTTGGCTTCTCATTGCCAAATGTGACCTACGGACGTaGGCATGCTCTGGGTCACAGGGGTGGCCAGTTCTGAGAGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: GVFTWLLIAKCDLRT*ACSGSQGWPVLRVC Trigger: GCACACTCTCAGAACTGGCCACCCCTGTGACCCAGAGCATGCCAACGTCCGTAGGTCACATTTGGCAATGAGAAGCCAAGTGAACACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR-3UTR CCA 90 bp | ATACCACAGCTCATGCTCTCACAGGATTGGTGTGTTCACTTGGCTTCTCATTGCGACGTTGGCATGCTCTaGGTCACAGGGGTGGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: IPQLMLSQDWCVHLASHCDVGML*VTGVAS Trigger: ACTGGCCACCCCTGTGACCCAGAGCATGCCAACGTC...GCAATGAGAAGCCAAGTGAACACACCAATCCTGTGAGAGCATGAGCTGTGGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR CAA 90 bp | ACAGCTCATGCTCTCACAGGATTGGTGTGTTCACTTGGCTTCTCATaGCCAAATGTGACCTACGGACGTTGGCATGCTCTGGGTCACAGG | + |
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Preference number: 2 (lower is better) Translates to: TAHALTGLVCSLGFS*PNVTYGRWHALGHR Trigger: CCTGTGACCCAGAGCATGCCAACGTCCGTAGGTCACATTTGGCAATGAGAAGCCAAGTGAACACACCAATCCTGTGAGAGCATGAGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR-3UTR GCA 90 bp | GACCTACGGACGTTGGCATGCTCTGGGTCACAGGGGTGGCCAGTTCTGAGAGTGAAAGTAGCTTCCAAATaGTGCTCTAATTTGAGCGGA | + |
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Preference number: 2 (lower is better) Translates to: DLRTLACSGSQGWPVLRVKVASK*CSNLSG Trigger: TCCGCTCAAATTAGAGCAGCATTTGGAAGCTACTTT...CACTCTCAGAACTGGCCACCCCTGTGACCCAGAGCATGCCAACGTCCGTAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR-3UTR CCA 90 bp | CACACACAAACATGGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCTGTCATAGTTCAGGGTaGCCTTGGAGAGAGCTGCTA | + |
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Preference number: 2 (lower is better) Translates to: HTQTWGNTYLAKGCSQLPCHSSG*PWRELL Trigger: TAGCAGCTCTCTCCAAGGCCACCCTGAACTATGACA...GGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
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| 3UTR-3UTR CCA 90 bp | GTCACAGGGGTGGCCAGTTCTGAGAGTGTGCTGTCATGTGATGTCATTGACTGTTGTCATAGTTCAGGGTaGCCTTGGAGAGAGCTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: VTGVASSESVLSCDVIDCCHSSG*PWRELL Trigger: TAGCAGCTCTCTCCAAGGCCACCCTGAACTATGACA...ACAGTCAATGACATCACATGACAGCACACTCTCAGAACTGGCCACCCCTGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR-3UTR CCA 90 bp | GTCACAGGGGTGGCCAGTTCTGAGAGTGTGCTGTCATGTGATGTCATTGACTGTAGAAGGAACAGGGCTTaGATGTTCGCATCCCACCAT | + |
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Preference number: 2 (lower is better) Translates to: VTGVASSESVLSCDVIDCRRNRA*MFASHH Trigger: ATGGTGGGATGCGAACATCCAAGCCCTGTTCCTTCT...ACAGTCAATGACATCACATGACAGCACACTCTCAGAACTGGCCACCCCTGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR CAA 90 bp | GTTCACCAAATTCACATCCACACACAAACATGGGGGAACACATATTaGGCAAAGGGCTGTTCCCAGCTCCCCAGCCATGCAGTCTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: VHQIHIHTQTWGNTY*AKGCSQLPSHAVFC Trigger: ACAGAAGACTGCATGGCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGTGTGGATGTGAATTTGGTGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR CAA 90 bp | GCACAAGGTCTCTCCTGTCATACCACAGCTCATGCTCTCACAGGATaGGTGTGTTCACTTGGCTTCTCATTGCCAAATGTGACCTACGGA | + |
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Preference number: 2 (lower is better) Translates to: AQGLSCHTTAHALTG*VCSLGFSLPNVTYG Trigger: TCCGTAGGTCACATTTGGCAATGAGAAGCCAAGTGAACACACCAATCCTGTGAGAGCATGAGCTGTGGTATGACAGGAGAGACCTTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR-3UTR TCA 90 bp | CCCGTGCAAATACAGTTCACGGAGGCAATGCCACACTCTTCTGTGAAATGGAGAACTGTACTGTCTCAATaGCAGAGTGCCTGCTGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: PVQIQFTEAMPHSSVKWRTVLSQ*QSACWV Trigger: TACCCAGCAGGCACTCTGTCATTGAGACAGTACAGT...TCTCCATTTCACAGAAGAGTGTGGCATTGCCTCCGTGAACTGTATTTGCACGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR-3UTR CCA 90 bp | ATACCACAGCTCATGCTCTCACAGGATTGGTGTGTTCACTTGGCTTCTCATTGCGGGGGAACACATATTTaGCAAAGGGCTGTTCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: IPQLMLSQDWCVHLASHCGGTHI*QRAVPS Trigger: GCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCC...GCAATGAGAAGCCAAGTGAACACACCAATCCTGTGAGAGCATGAGCTGTGGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR CAA 90 bp | GTACTAGCGGCTCTCAAGGATCCCCTTCTCATCCATTACAGAAGTTaGAGTAAATATATTGTATTTAACTTGGACTTCCACATCGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: VLAALKDPLLIHYRS*SKYIVFNLDFHIVV Trigger: AACCACGATGTGGAAGTCCAAGTTAAATACAATATATTTACTCAAACTTCTGTAATGGATGAGAAGGGGATCCTTGAGAGCCGCTAGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR-3UTR CCA 90 bp | TTTTATTTAGTCCATAGCACCAGGTTGAGATACAAGACCATACATCAGGATCAAGAGAACACTCCTCTCTaGCTTCATGGAGAAGATTAT | + |
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Preference number: 2 (lower is better) Translates to: FYLVHSTRLRYKTIHQDQENTPL*LHGEDY Trigger: ATAATCTTCTCCATGAAGCCAGAGAGGAGTGTTCTC...TTGATCCTGATGTATGGTCTTGTATCTCAACCTGGTGCTATGGACTAAATAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR-3UTR CCA 90 bp | TTTTATTTAGTCCATAGCACCAGGTTGAGATACAAGACCATACATCAGGATCAAATTGGTGTGTTCACTTaGCTTCTCATTGCCAAATGT | + |
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Preference number: 2 (lower is better) Translates to: FYLVHSTRLRYKTIHQDQIGVFT*LLIAKC Trigger: ACATTTGGCAATGAGAAGCCAAGTGAACACACCAAT...TTGATCCTGATGTATGGTCTTGTATCTCAACCTGGTGCTATGGACTAAATAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR CAA 90 bp | ACAGGTTACTTACTCCAGACATTTTATTTAGTCCATAGCACCAGGTaGAGATACAAGACCATACATCAGGATCAAACATTGTTTTTAGTC | + |
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Preference number: 2 (lower is better) Translates to: TGYLLQTFYLVHSTR*RYKTIHQDQTLFLV Trigger: GACTAAAAACAATGTTTGATCCTGATGTATGGTCTTGTATCTCAACCTGGTGCTATGGACTAAATAAAATGTCTGGAGTAAGTAACCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR-3UTR GCA 90 bp | TTTTATTTAGTCCATAGCACCAGGTTGAGATACAAGACCATACATCAGGATCAAGTCATTGACTGTGTATaGATTACATTTCTGATGAGT | + |
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Preference number: 2 (lower is better) Translates to: FYLVHSTRLRYKTIHQDQVIDCV*ITFLMS Trigger: ACTCATCAGAAATGTAATGCATACACAGTCAATGAC...TTGATCCTGATGTATGGTCTTGTATCTCAACCTGGTGCTATGGACTAAATAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR-3UTR CAA 90 bp | ACGGACGTTGGCATGCTCTGGGTCACAGGGGTGGCCAGTTCTGAGAGTGTGCTGTGGGGGAACACATATTaGGCAAAGGGCTGTTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: TDVGMLWVTGVASSESVLWGNTY*AKGCSQ Trigger: CTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCA...CAGCACACTCTCAGAACTGGCCACCCCTGTGACCCAGAGCATGCCAACGTCCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR-3UTR CAA 90 bp | ACGGACGTTGGCATGCTCTGGGTCACAGGGGTGGCCAGTTCTGAGAGTGTGCTGAAGAAGGAACAGGGCTaGGATGTTCGCATCCCACCA | + |
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Preference number: 3 (lower is better) Translates to: TDVGMLWVTGVASSESVLKKEQG*DVRIPP Trigger: TGGTGGGATGCGAACATCCAAGCCCTGTTCCTTCTT...CAGCACACTCTCAGAACTGGCCACCCCTGTGACCCAGAGCATGCCAACGTCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR CCA 72 bp | GACCTACGGACGTTGGCATGCTCTGGGTCACAGGGGTaGCCAGTTCTGAGAGTGTGCTGTCATGTGATGTCA | + |
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Preference number: 3 (lower is better) Translates to: DLRTLACSGSQG*PVLRVCCHVMS Trigger: TGACATCACATGACAGCACACTCTCAGAACTGGCCACCCCTGTGACCCAGAGCATGCCAACGTCCGTAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR GCA 72 bp | CAGAGAACCGGCTCGGCCAGAGTCTTTCCACTCCCGTaGAAATACAGTTCACGGAGGCAATGCCACACTCTT | + |
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Preference number: 3 (lower is better) Translates to: QRTGSARVFPLP*KYSSRRQCHTL Trigger: AAGAGTGTGGCATTGCCTCCGTGAACTGTATTTGCACGGGAGTGGAAAGACTCTGGCCGAGCCGGTTCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR GCA 72 bp | CTTCTCATTGCCAAATGTGACCTACGGACGTTGGCATaGTCTGGGTCACAGGGGTGGCCAGTTCTGAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: LLIAKCDLRTLA*SGSQGWPVLRV Trigger: CACTCTCAGAACTGGCCACCCCTGTGACCCAGAGCATGCCAACGTCCGTAGGTCACATTTGGCAATGAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR TCA 72 bp | GATTGGTGTGTTCACTTGGCTTCTCATTGCCAAATGTaGCCTACGGACGTTGGCATGCTCTGGGTCACAGGG | + |
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Preference number: 3 (lower is better) Translates to: DWCVHLASHCQM*PTDVGMLWVTG Trigger: CCCTGTGACCCAGAGCATGCCAACGTCCGTAGGTCACATTTGGCAATGAGAAGCCAAGTGAACACACCAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR CCA 72 bp | TTTGAGCGGAGGAGAGAACACTCCTCTCTGGCTTCATaGAGAAGATTATCAGGATCTAACGGCCGCAGGACG | + |
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Preference number: 3 (lower is better) Translates to: FERRREHSSLAS*RRLSGSNGRRT Trigger: CGTCCTGCGGCCGTTAGATCCTGATAATCTTCTCCATGAAGCCAGAGAGGAGTGTTCTCTCCTCCGCTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR TCA 72 bp | AAGGAACAGGGCTTGGATGTTCGCATCCCACCATCCTaGCAGGAAGACTTCCAAGAGCACACACTAGGCTAT | + |
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Preference number: 3 (lower is better) Translates to: KEQGLDVRIPPS*QEDFQEHTLGY Trigger: ATAGCCTAGTGTGTGCTCTTGGAAGTCTTCCTGTCAGGATGGTGGGATGCGAACATCCAAGCCCTGTTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR CCA 72 bp | TGGCAGCACAATAAACGAATGTGTCATAGTTCAGGGTaGCCTTGGAGAGAGCTGCTACAGCTGTCCAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: WQHNKRMCHSSG*PWRELLQLSSC Trigger: ACAGCTGGACAGCTGTAGCAGCTCTCTCCAAGGCCACCCTGAACTATGACACATTCGTTTATTGTGCTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
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| 3UTR GCA 72 bp | TGCTCTGGGTCACAGGGGTGGCCAGTTCTGAGAGTGTaGTGTCATGTGATGTCATTGACTGTGTATGCATTA | + |
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Preference number: 3 (lower is better) Translates to: CSGSQGWPVLRV*CHVMSLTVYAL Trigger: TAATGCATACACAGTCAATGACATCACATGACAGCACACTCTCAGAACTGGCCACCCCTGTGACCCAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR GCA 72 bp | CTTAGCACAAGGTCTCTCCTGTCATACCACAGCTCATaGTCTCACAGGATTGGTGTGTTCACTTGGCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: LSTRSLLSYHSS*SHRIGVFTWLL Trigger: GAGAAGCCAAGTGAACACACCAATCCTGTGAGAGCATGAGCTGTGGTATGACAGGAGAGACCTTGTGCTAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR CCA 72 bp | CACAGCTCATGCTCTCACAGGATTGGTGTGTTCACTTaGCTTCTCATTGCCAAATGTGACCTACGGACGTTG | + |
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Preference number: 3 (lower is better) Translates to: HSSCSHRIGVFT*LLIAKCDLRTL Trigger: CAACGTCCGTAGGTCACATTTGGCAATGAGAAGCCAAGTGAACACACCAATCCTGTGAGAGCATGAGCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR CCA 72 bp | TGCTCTAATTTGAGCGGAGGAGAGAACACTCCTCTCTaGCTTCATGGAGAAGATTATCAGGATCTAACGGCC | + |
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Preference number: 3 (lower is better) Translates to: CSNLSGGENTPL*LHGEDYQDLTA Trigger: GGCCGTTAGATCCTGATAATCTTCTCCATGAAGCCAGAGAGGAGTGTTCTCTCCTCCGCTCAAATTAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR GCA 72 bp | GAGAGTGTGCTGTCATGTGATGTCATTGACTGTGTATaGATTACATTTCTGATGAGTGGATGGTTCAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: ESVLSCDVIDCV*ITFLMSGWFSP Trigger: GGGACTGAACCATCCACTCATCAGAAATGTAATGCATACACAGTCAATGACATCACATGACAGCACACTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR TCA 72 bp | AGACCTCTCAAGGGCATGAAATACAGAGGGACAAACTaGTATGTGATTTCAAATGCCCAGTGTGAAAGTGAC | + |
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Preference number: 3 (lower is better) Translates to: RPLKGMKYRGTN*YVISNAQCESD Trigger: GTCACTTTCACACTGGGCATTTGAAATCACATATCAGTTTGTCCCTCTGTATTTCATGCCCTTGAGAGGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR TCA 72 bp | CTGCCTCCAAATGTTAAGCTGCATGTGATGAGTGTGTaGGAGTCTTTTATAATGAAAGTAGCTTCCAAATGC | + |
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Preference number: 3 (lower is better) Translates to: LPPNVKLHVMSV*ESFIMKVASKC Trigger: GCATTTGGAAGCTACTTTCATTATAAAAGACTCTCACACACTCATCACATGCAGCTTAACATTTGGAGGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR TCA 72 bp | AAATACAGTTCACGGAGGCAATGCCACACTCTTCTGTaGAATGGAGATGAGTTTTACTTGTTCATAGTCGAT | + |
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Preference number: 3 (lower is better) Translates to: KYSSRRQCHTLL*NGDEFYLFIVD Trigger: ATCGACTATGAACAAGTAAAACTCATCTCCATTTCACAGAAGAGTGTGGCATTGCCTCCGTGAACTGTATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR TCA 72 bp | AGCAGGTTTTCTGTAATTCTCAGCTACAACAAACTCTaGCGTTACATTAGGAAGTGGTTCCAAACTGATTGG | + |
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Preference number: 3 (lower is better) Translates to: SRFSVILSYNKL*RYIRKWFQTDW Trigger: CCAATCAGTTTGGAACCACTTCCTAATGTAACGTCAGAGTTTGTTGTAGCTGAGAATTACAGAAAACCTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR TCA 72 bp | ACGGAGGCAATGCCACACTCTTCTGTGAAATGGAGATaGGTTTTACTTGTTCATAGTCGATTTCCTATTTAT | + |
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Preference number: 3 (lower is better) Translates to: TEAMPHSSVKWR*VLLVHSRFPIY Trigger: ATAAATAGGAAATCGACTATGAACAAGTAAAACTCATCTCCATTTCACAGAAGAGTGTGGCATTGCCTCCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR TCA 72 bp | ATAAGCTTGGCTATATGTGTGCTTCGTAAGAGTTCCTaGCTAGGATCAAGAAAGCAGGTTTTCTGTAATTCT | + |
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Preference number: 3 (lower is better) Translates to: ISLAICVLRKSS*LGSRKQVFCNS Trigger: AGAATTACAGAAAACCTGCTTTCTTGATCCTAGTCAGGAACTCTTACGAAGCACACATATAGCCAAGCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
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| 3UTR TCA 72 bp | AAGACCATACATCAGGATCAAACATTGTTTTTAGTCTaGCAGCCAAAGACCTATAAGCTTGGCTATATGTGT | + |
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Preference number: 3 (lower is better) Translates to: KTIHQDQTLFLV*QPKTYKLGYMC Trigger: ACACATATAGCCAAGCTTATAGGTCTTTGGCTGTCAGACTAAAAACAATGTTTGATCCTGATGTATGGTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| CDS-3UTR TCA 90 bp | ACGGACGTTGGCATGCTCTGGGTCACAGGGGTGGCCAGTTCTGAGAGTGTGCTGCTCCCGTTCTTGACGTaGACAGTGGCCACTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TDVGMLWVTGVASSESVLLPFLT*TVATLW Trigger: CCAGAGAGTGGCCACTGTTCACGTCAAGAACGGGAG...CAGCACACTCTCAGAACTGGCCACCCCTGTGACCCAGAGCATGCCAACGTCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| CDS-3UTR GCA 90 bp | ACGGACGTTGGCATGCTCTGGGTCACAGGGGTGGCCAGTTCTGAGAGTGTGCTGGGCCGGAAAATGCCCTaGTCCTCAGGGACAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TDVGMLWVTGVASSESVLGRKMP*SSGTTP Trigger: TGGAGTTGTCCCTGAGGAGCAGGGCATTTTCCGGCC...CAGCACACTCTCAGAACTGGCCACCCCTGTGACCCAGAGCATGCCAACGTCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| CDS-3UTR TCA 90 bp | GGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCCATGCAGTCTCCATGCTCCCGTTCTTaGCGTGAACAGTGGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GGTHIWQRAVPSSPAMQSPCSRS*REQWPL Trigger: GAGTGGCCACTGTTCACGTCAAGAACGGGAGCATGG...AGACTGCATGGCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR TCA 90 bp | GACCTACGGACGTTGGCATGCTCTGGGTCACAGGGGTGGCCAGTTCTGAGAGTGGGAACCGGAAGGCATTaGATTGGAAAGTGGCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DLRTLACSGSQGWPVLRVGTGRH*IGKWPC Trigger: ACAGGGCCACTTTCCAATTCAATGCCTTCCGGTTCC...CACTCTCAGAACTGGCCACCCCTGTGACCCAGAGCATGCCAACGTCCGTAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| CDS-3UTR TCA 90 bp | GGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCCATGCAGTCTTACTGTAAGGGGTACATaGAGTCAGCCGAGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GEHIFGKGLFPAPQPCSLTVRGT*SQPRGW Trigger: CCACCCCCTCGGCTGACTTCATGTACCCCTTACAGT...AAGACTGCATGGCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCCATGCAGTAGTCAGCCGAGGGGGTaGCCCAGCAGCTATTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: MGEHIFGKGLFPAPQPCSSQPRG*PSSYSR Trigger: TCTTGAATAGCTGCTGGGCCACCCCCTCGGCTGACT...ACTGCATGGCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR GCA 90 bp | GGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCCATGCAGTCTTTGGCCCTGTGGTCTTTaGCGTTCTCATGCACGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GEHIFGKGLFPAPQPCSLWPCGL*RSHARG Trigger: TCCTCGTGCATGAGAACGGCAAAGACCACAGGGCCA...AAGACTGCATGGCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR CCA 90 bp | CACACACAAACATGGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGTCAGCCGAGGGGGTaGCCCAGCAGCTATTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HTQTWGNTYLAKGCSQLPSQPRG*PSSYSR Trigger: TCTTGAATAGCTGCTGGGCCACCCCCTCGGCTGACT...GGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| 3UTR CAA 72 bp | ACTTGGCTTCTCATTGCCAAATGTGACCTACGGACGTaGGCATGCTCTGGGTCACAGGGGTGGCCAGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TWLLIAKCDLRT*ACSGSQGWPVL Trigger: CAGAACTGGCCACCCCTGTGACCCAGAGCATGCCAACGTCCGTAGGTCACATTTGGCAATGAGAAGCCAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| CDS-3UTR TCA 90 bp | AACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCCATGCAGTCTTCTGTACTGTAAGGGGTACATaGAGTCAGCCGAGGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NTYLAKGCSQLPSHAVFCTVRGT*SQPRGW Trigger: CCACCCCCTCGGCTGACTTCATGTACCCCTTACAGT...ACAGAAGACTGCATGGCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR GCA 90 bp | ACACAAACATGGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCTGGCCCTGTGGTCTTTaGCGTTCTCATGCACGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TQTWGNTYLAKGCSQLPSWPCGL*RSHARG Trigger: TCCTCGTGCATGAGAACGGCAAAGACCACAGGGCCA...GCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR TCA 90 bp | CATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCCATGCAGTCTTCTGTCTGTTCCCGCAAACAGATCTaGGCCGATTTCGGACGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HIWQRAVPSSPAMQSSVCSRKQI*ADFGRF Trigger: GAAACGTCCGAAATCGGCTCAGATCTGTTTGCGGGA...ACAGACAGAAGACTGCATGGCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR TCA 90 bp | CCACACACAAACATGGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCGGAACCGGAAGGCATTaGATTGGAAAGTGGCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PHTNMGEHIFGKGLFPAPGTGRH*IGKWPC Trigger: ACAGGGCCACTTTCCAATTCAATGCCTTCCGGTTCC...GGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGTGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR TCA 90 bp | CATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCCATGCAGTCTTCTGTCTGTCTCCCGTTCTTGACGTaGACAGTGGCCACTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HIWQRAVPSSPAMQSSVCLPFLT*TVATLK Trigger: TTTCAGAGTGGCCACTGTTCACGTCAAGAACGGGAG...ACAGACAGAAGACTGCATGGCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120936.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCCATGCAGTCTTGTAGAAGTGGTAGATaGGGGGCTTGTACTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: GGTHIWQRAVPSSPAMQSCRSGR*GACTLT Trigger: AGTCAGAGTACAAGCCCCCCATCTACCACTTCTACA...AGACTGCATGGCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR CCA 90 bp | ACACAAACATGGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCTGGAAAGTGGCCCTGTaGTCTTTGCCGTTCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: TQTWGNTYLAKGCSQLPSWKVAL*SLPFSC Trigger: GCATGAGAACGGCAAAGACCACAGGGCCACTTTCCA...GCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR TCA 90 bp | ACACAAACATGGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCTCTCACTGTCGCAGATaGACGTCTCACAGTGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: TQTWGNTYLAKGCSQLPSSHCRR*TSHSVT Trigger: GGTTACACTGTGAGACGTTCATCTGCGACAGTGAGA...GCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR TCA 90 bp | CCACACACAAACATGGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCTCTCACTGTCGCAGATaGACGTCTCACAGTGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: PHTNMGEHIFGKGLFPAPSHCRR*TSHSVT Trigger: GGTTACACTGTGAGACGTTCATCTGCGACAGTGAGA...GGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGTGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR TCA 90 bp | GGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCCATGCAGTCTTCTGTGAAGAAGAACATCTaGGAAGTCACAGAGGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GTHIWQRAVPSSPAMQSSVKKNI*EVTEAG Trigger: TCCGGCCTCTGTGACTTCTCAGATGTTCTTCTTCAC...AGAAGACTGCATGGCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR TCA 90 bp | CACACACAAACATGGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCTCCCCAGCATCAGGATaGGGTGAAGAAGAACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTQTWGNTYLAKGCSQLPSPASG*GEEEHL Trigger: CAGATGTTCTTCTTCACCTCATCCTGATGCTGGGGA...GGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR TCA 90 bp | GGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCCATGCAGTCTTCTTCCCCAGCATCAGGATaGGGTGAAGAAGAACATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTHIWQRAVPSSPAMQSSSPASG*GEEEHL Trigger: CAGATGTTCTTCTTCACCTCATCCTGATGCTGGGGA...AGAAGACTGCATGGCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR GCA 90 bp | CATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCCATGCAGTCTTCTGTCTGTTCTGGTCACGTAGCATaGGCTTCCGTTTGTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: HIWQRAVPSSPAMQSSVCSGHVA*ASVCHS Trigger: ACTGTGACAAACGGAAGCGCATGCTACGTGACCAGA...ACAGACAGAAGACTGCATGGCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR GCA 90 bp | CACACAAACATGGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGTCTGGTCACGTAGCATaGGCTTCCGTTTGTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: HTNMGEHIFGKGLFPAPQSGHVA*ASVCHS Trigger: ACTGTGACAAACGGAAGCGCATGCTACGTGACCAGA...CTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR CCA 90 bp | CACACACAAACATGGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCTCACTGTGCTGTCGTTaGACACGATGTGGCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: HTQTWGNTYLAKGCSQLPSLCCR*TRCGCR Trigger: TCTACAGCCACATCGTGTCCAACGACAGCACAGTGA...GGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR CCA 90 bp | CCCACCATCCTGACAGGAAGACTTCCAAGAGCACACACTAGGCTATTGAACGCATGGAAAGTGGCCCTGTaGTCTTTGCCGTTCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: PTILTGRLPRAHTRLLNAWKVAL*SLPFSC Trigger: GCATGAGAACGGCAAAGACCACAGGGCCACTTTCCA...TGCGTTCAATAGCCTAGTGTGTGCTCTTGGAAGTCTTCCTGTCAGGATGGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| CDS-3UTR TCA 90 bp | GAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCCATGCAGTCTTCTGGTGACAGATCAGGGATaGCAAACTGGTAATAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EHIFGKGLFPAPQPCSLLVTDQG*QTGNSH Trigger: GTGGCTATTACCAGTTTGTCATCCCTGATCTGTCAC...CAGAAGACTGCATGGCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR TCA 90 bp | CACACACAAACATGGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCGTGACAGATCAGGGATaGCAAACTGGTAATAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HTQTWGNTYLAKGCSQLPVTDQG*QTGNSH Trigger: GTGGCTATTACCAGTTTGTCATCCCTGATCTGTCAC...GGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR TCA 90 bp | GGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCCATGCAGTCTTGGACTTGTTCTTAGGTaGCAGATCAGGGATGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: GEHIFGKGLFPAPQPCSLGLVLR*QIRDDK Trigger: TTTGTCATCCCTGATCTGTCACCTAAGAACAAGTCC...AAGACTGCATGGCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| 3UTR CAA 72 bp | ATTCACATCCACACACAAACATGGGGGAACACATATTaGGCAAAGGGCTGTTCCCAGCTCCCCAGCCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: IHIHTQTWGNTY*AKGCSQLPSHA Trigger: TGCATGGCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGTGTGGATGTGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| 3UTR CAA 72 bp | GCTCTCACAGGATTGGTGTGTTCACTTGGCTTCTCATaGCCAAATGTGACCTACGGACGTTGGCATGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALTGLVCSLGFS*PNVTYGRWHAL Trigger: CAGAGCATGCCAACGTCCGTAGGTCACATTTGGCAATGAGAAGCCAAGTGAACACACCAATCCTGTGAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| CDS-3UTR TCA 90 bp | GGCAGAGGTTCACCAAATTCACATCCACACACAAACATGGGGGAACACATATTTCCATGCTCCCGTTCTTaGCGTGAACAGTGGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GRGSPNSHPHTNMGEHIFPCSRS*REQWPL Trigger: GAGTGGCCACTGTTCACGTCAAGAACGGGAGCATGG...AAATATGTGTTCCCCCATGTTTGTGTGTGGATGTGAATTTGGTGAACCTCTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| CDS-3UTR TCA 90 bp | CCACACACAAACATGGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCAGCATCAGGATGAGGTaGAGAAGAACATCTGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PHTNMGEHIFGKGLFPAPSIRMR*RRTSEK Trigger: CTTCTCAGATGTTCTTCTTCACCTCATCCTGATGCT...GGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGTGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR TCA 90 bp | ACACAAACATGGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCAGCATCAGGATGAGGTaGAGAAGAACATCTGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TQTWGNTYLAKGCSQLPSSIRMR*RRTSEK Trigger: CTTCTCAGATGTTCTTCTTCACCTCATCCTGATGCT...GCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCTCTGGCTTCATGGAGAAGATTATCAGGATCTAACGGCCGCAGGACGGAATGTAGAAGTGGTAGATaGGGGGCTTGTACTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: SSLASWRRLSGSNGRRTECRSGR*GACTLT Trigger: AGTCAGAGTACAAGCCCCCCATCTACCACTTCTACA...TTCCGTCCTGCGGCCGTTAGATCCTGATAATCTTCTCCATGAAGCCAGAGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| CDS-3UTR CCA 90 bp | CACACAAACATGGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGAAGTTGAGGGACAACTaGCTTTCAAATGTGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: HTNMGEHIFGKGLFPAPQKLRDN*LSNVPM Trigger: CATGGGCACATTTGAAAGCCAGTTGTCCCTCAACTT...CTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR CCA 90 bp | CACACAAACATGGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGAGTTTGGGGATGTTCTaGAACCGGAAGGCATTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HTNMGEHIFGKGLFPAPQSLGMF*NRKALN Trigger: ATTCAATGCCTTCCGGTTCCAGAACATCCCCAAACT...CTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR CCA 90 bp | CACACACAAACATGGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAAACCTTGGAAAGTTTaGGGATGTTCTGGAACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: HTQTWGNTYLAKGCSQLPKPWKV*GCSGTG Trigger: TCCGGTTCCAGAACATCCCCAAACTTTCCAAGGTTT...GGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR CCA 90 bp | GTCACAGGGGTGGCCAGTTCTGAGAGTGTGCTGTCATGTGATGTCATTGACTGTAGTTTGGGGATGTTCTaGAACCGGAAGGCATTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VTGVASSESVLSCDVIDCSLGMF*NRKALN Trigger: ATTCAATGCCTTCCGGTTCCAGAACATCCCCAAACT...ACAGTCAATGACATCACATGACAGCACACTCTCAGAACTGGCCACCCCTGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| CDS-3UTR CCA 90 bp | TCCTCTCTGGCTTCATGGAGAAGATTATCAGGATCTAACGGCCGCAGGACGGAAAAACCTTGGAAAGTTTaGGGATGTTCTGGAACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLASWRRLSGSNGRRTEKPWKV*GCSGTG Trigger: TCCGGTTCCAGAACATCCCCAAACTTTCCAAGGTTT...TTCCGTCCTGCGGCCGTTAGATCCTGATAATCTTCTCCATGAAGCCAGAGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| 3UTR CAA 72 bp | CTCTCCTGTCATACCACAGCTCATGCTCTCACAGGATaGGTGTGTTCACTTGGCTTCTCATTGCCAAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSCHTTAHALTG*VCSLGFSLPNV Trigger: CACATTTGGCAATGAGAAGCCAAGTGAACACACCAATCCTGTGAGAGCATGAGCTGTGGTATGACAGGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| CDS-3UTR TCA 90 bp | AAAGTAGCTTCCAAATGCTGCTCTAATTTGAGCGGAGGAGAGAACACTCCTCTCGTGAAGAAGAACATCTaGGAAGTCACAGAGGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KVASKCCSNLSGGENTPLVKKNI*EVTEAG Trigger: TCCGGCCTCTGTGACTTCTCAGATGTTCTTCTTCAC...GAGAGGAGTGTTCTCTCCTCCGCTCAAATTAGAGCAGCATTTGGAAGCTACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| CDS-3UTR GCA 90 bp | CACACACAAACATGGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAAGGGGAGAGAATTTTaGATAAGGACTCTGGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HTQTWGNTYLAKGCSQLPKGREF*IRTLVK Trigger: TTTGACCAGAGTCCTTATGCAAAATTCTCTCCCCTT...GGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000120936.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGGTTCACCAAATTCACATCCACACACAAACATGGGGGAACACATATTTACAGTGGCCACTCTCTaGTCAAAAGCAGCCTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GRGSPNSHPHTNMGEHIFTVATL*SKAAWF Trigger: GAACCAGGCTGCTTTTGACCAGAGAGTGGCCACTGT...AAATATGTGTTCCCCCATGTTTGTGTGTGGATGTGAATTTGGTGAACCTCTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| CDS-3UTR TCA 90 bp | AACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCCATGCAGTCTTCTGTAACAAAACACAAGGATaGCATCTGCTTTATTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NTYLAKGCSQLPSHAVFCNKTQG*HLLYSE Trigger: CTCCGAATAAAGCAGATGTCATCCTTGTGTTTTGTT...ACAGAAGACTGCATGGCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGGTTCACCAAATTCACATCCACACACAAACATGGGGGAACACATATTTTCACTGTGCTGTCGTTaGACACGATGTGGCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRGSPNSHPHTNMGEHIFSLCCR*TRCGCR Trigger: TCTACAGCCACATCGTGTCCAACGACAGCACAGTGA...AAATATGTGTTCCCCCATGTTTGTGTGTGGATGTGAATTTGGTGAACCTCTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| 3UTR CAA 72 bp | AATATATTGTATTTAACTTGGACTTCCACATCGTGGTaGAAGACTGGAACTTCCTGCCTGGGGGCTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: NILYLTWTSTSW*KTGTSCLGARC Trigger: GCATCGAGCCCCCAGGCAGGAAGTTCCAGTCTTCAACCACGATGTGGAAGTCCAAGTTAAATACAATATATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| CDS-3UTR TCA 90 bp | ATACCACAGCTCATGCTCTCACAGGATTGGTGTGTTCACTTGGCTTCTCATTGCAACAAAACACAAGGATaGCATCTGCTTTATTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IPQLMLSQDWCVHLASHCNKTQG*HLLYSE Trigger: CTCCGAATAAAGCAGATGTCATCCTTGTGTTTTGTT...GCAATGAGAAGCCAAGTGAACACACCAATCCTGTGAGAGCATGAGCTGTGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| CDS CCA 90 bp | GCCCTGCTCCTCAGGGACAACTCCACAACCAGGACACCTCCTGTCTaGTCACGTAGCATGCGCTTCCGTTTGTCACAGTTCACGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALLLRDNSTTRTPPV*SRSMRFRLSQFTGQ Trigger: CTGCCCCGTGAACTGTGACAAACGGAAGCGCATGCTACGTGACCAGACAGGAGGTGTCCTGGTTGTGGAGTTGTCCCTGAGGAGCAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR CAA 90 bp | ACGGACGTTGGCATGCTCTGGGTCACAGGGGTGGCCAGTTCTGAGAGTGTGCTGGTGGGGCAGCCCTTATaGATGAGCTGCCACTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: TDVGMLWVTGVASSESVLVGQPL*MSCHCK Trigger: CTTACAGTGGCAGCTCATCAATAAGGGCTGCCCCAC...CAGCACACTCTCAGAACTGGCCACCCCTGTGACCCAGAGCATGCCAACGTCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| CDS-3UTR CAA 90 bp | GACCTACGGACGTTGGCATGCTCTGGGTCACAGGGGTGGCCAGTTCTGAGAGTGCCGGAAGGCATTGAATaGGAAAGTGGCCCTGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: DLRTLACSGSQGWPVLRVPEGIE*ESGPVV Trigger: GACCACAGGGCCACTTTCCAATTCAATGCCTTCCGG...CACTCTCAGAACTGGCCACCCCTGTGACCCAGAGCATGCCAACGTCCGTAGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| CDS-3UTR CAA 90 bp | GGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCCATGCAGTCTTGTGGCCCTGTGGTCTTaGCCGTTCTCATGCACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GEHIFGKGLFPAPQPCSLVALWS*PFSCTR Trigger: CCTCGTGCATGAGAACGGCAAAGACCACAGGGCCAC...AAGACTGCATGGCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS CCA 90 bp | AGCTTACTCCTCAGGGACAACTCCACAACCAGGACACCTCCTGTCTaGTCACGTAGCATGCGCTTCCGTTTGTCACAGTTCACGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLLLRDNSTTRTPPV*SRSMRFRLSQFTGQ Trigger: CTGCCCCGTGAACTGTGACAAACGGAAGCGCATGCTACGTGACCAGACAGGAGGTGTCCTGGTTGTGGAGTTGTCCCTGAGGAGTAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124545.2 |
||
| CDS CCA 90 bp | GCCCTGCCTGTGGTGCCTGTGGACACAGCCCAGGAGTACACATATTaGGCAATCAGCTTACTCCTCAGGGACAACTCCACAACCAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: ALPVVPVDTAQEYTY*AISLLLRDNSTTRT Trigger: TGTCCTGGTTGTGGAGTTGTCCCTGAGGAGTAAGCTGATTGCCCAATATGTGTACTCCTGGGCTGTGTCCACAGGCACCACAGGCAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124545.2 |
||
| CDS-3UTR CAA 90 bp | CAAACATGGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCCATGTGGCCCTGTGGTCTTaGCCGTTCTCATGCACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QTWGNTYLAKGCSQLPSHVALWS*PFSCTR Trigger: CCTCGTGCATGAGAACGGCAAAGACCACAGGGCCAC...ATGGCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS TCA 90 bp | CACAGCCCAGGTCCCCAGCATCAGGATGAGGTGAAGAAGAACATCTaGGAAGTCACAGAGGCCGGAAAATGCCCTGCTCCTCAGGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: HSPGPQHQDEVKKNI*EVTEAGKCPAPQGQ Trigger: TTGTCCCTGAGGAGCAGGGCATTTTCCGGCCTCTGTGACTTCTCAGATGTTCTTCTTCACCTCATCCTGATGCTGGGGACCTGGGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS CCA 90 bp | GGGATGTTCTGGAACCGGAAGGCATTGAATTGGAAAGTGGCCCTGTaGTCTTTGCCGTTCTCATGCACGAGGACTGTCTCATCGGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GMFWNRKALNWKVAL*SLPFSCTRTVSSVG Trigger: CCCCACCGATGAGACAGTCCTCGTGCATGAGAACGGCAAAGACCACAGGGCCACTTTCCAATTCAATGCCTTCCGGTTCCAGAACATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000124545.2 |
||
| CDS-3UTR CAA 90 bp | GGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCCATGCAGTCTTGTGGGGCAGCCCTTATaGATGAGCTGCCACTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: GEHIFGKGLFPAPQPCSLVGQPL*MSCHCK Trigger: CTTACAGTGGCAGCTCATCAATAAGGGCTGCCCCAC...AAGACTGCATGGCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS-3UTR CAA 90 bp | CCACACACAAACATGGGGGAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCAGCATGCGCTTCCGTTaGTCACAGTTCACGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PHTNMGEHIFGKGLFPAPSMRFR*SQFTGQ Trigger: CTGCCCCGTGAACTGTGACAAACGGAAGCGCATGCT...GGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTCCCCCATGTTTGTGTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS GCA 90 bp | GGTGAAGAAGAACATCTGAGAAGTCACAGAGGCCGGAAAATGCCCTaGTCCTCAGGGACAACTCCACAACCAGGACACCTCCTGTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GEEEHLRSHRGRKMP*SSGTTPQPGHLLSG Trigger: ACCAGACAGGAGGTGTCCTGGTTGTGGAGTTGTCCCTGAGGAGCAGGGCATTTTCCGGCCTCTGTGACTTCTCAGATGTTCTTCTTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS GCA 90 bp | GAACATCTGAGAAGTCACAGAGGCCGGAAAATGCCCTGCCTGTGGTaGCTGTGGACACAGCCCAGGAGTACACATATTGGGCAATCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: EHLRSHRGRKMPCLW*LWTQPRSTHIGQSA Trigger: AGCTGATTGCCCAATATGTGTACTCCTGGGCTGTGTCCACAGGCACCACAGGCAGGGCATTTTCCGGCCTCTGTGACTTCTCAGATGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124545.2 |
||
| CDS GCA 90 bp | GGTGAAGAAGAACATCTGAGAAGTCACAGAGGCCGGAAAATGCCCTaGCTGTGGTGCCTGTGGACACAGCCCAGGAGTACACATATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GEEEHLRSHRGRKMP*LWCLWTQPRSTHIG Trigger: CCCAATATGTGTACTCCTGGGCTGTGTCCACAGGCACCACAGGCAGGGCATTTTCCGGCCTCTGTGACTTCTCAGATGTTCTTCTTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124545.2 |
||
| CDS GCA 90 bp | AAGGCATTGAATTGGAAAGTGGCCCTGTGGTCTTTGCCGTTCTCATaGACGAGGACTGTCTCATCGGTGGGGCAGCCCTTATTGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KALNWKVALWSLPFS*TRTVSSVGQPLLMS Trigger: GCTCATCAATAAGGGCTGCCCCACCGATGAGACAGTCCTCGTGCATGAGAACGGCAAAGACCACAGGGCCACTTTCCAATTCAATGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000124545.2 |
||
| CDS CCA 90 bp | GAAGAACATCTGAGAAGTCACAGAGGCCGGAAAATGCCCTGCCTGTaGTGCCTGTGGACACAGCCCAGGAGTACACATATTGGGCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: EEHLRSHRGRKMPCL*CLWTQPRSTHIGQS Trigger: TGATTGCCCAATATGTGTACTCCTGGGCTGTGTCCACAGGCACCACAGGCAGGGCATTTTCCGGCCTCTGTGACTTCTCAGATGTTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124545.2 |
||
| CDS-3UTR CAA 90 bp | GAACACATATTTGGCAAAGGGCTGTTCCCAGCTCCCCAGCCATGCAGTCTTCTGTGGAACCGGAAGGCATaGAATTGGAAAGTGGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EHIFGKGLFPAPQPCSLLWNRKA*NWKVAL Trigger: CAGGGCCACTTTCCAATTCAATGCCTTCCGGTTCCA...CAGAAGACTGCATGGCTGGGGAGCTGGGAACAGCCCTTTGCCAAATATGTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS CCA 90 bp | ACCTTGGAAAGTTTGGGGATGTTCTGGAACCGGAAGGCATTGAATTaGAAAGTGGCCCTGTGGTCTTTGCCGTTCTCATGCACGAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: TLESLGMFWNRKALN*KVALWSLPFSCTRT Trigger: AGTCCTCGTGCATGAGAACGGCAAAGACCACAGGGCCACTTTCCAATTCAATGCCTTCCGGTTCCAGAACATCCCCAAACTTTCCAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000124545.2 |
||
| CDS TCA 90 bp | ACCAAACCTTGGAAAGTTTGGGGATGTTCTGGAACCGGAAGGCATTaGATTGGAAAGTGGCCCTGTGGTCTTTGCCGTTCTCATGCACGA | + |
|
Preference number: 5 (lower is better) Translates to: TKPWKVWGCSGTGRH*IGKWPCGLCRSHAR Trigger: TCGTGCATGAGAACGGCAAAGACCACAGGGCCACTTTCCAATTCAATGCCTTCCGGTTCCAGAACATCCCCAAACTTTCCAAGGTTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000124545.2 |
||
| CDS TCA 90 bp | GTTTGTCACAGTTCACGGGGCAGGAGAGCTTCTCACTGTCGCAGATaGACGTCTCACAGTGTAACCAAACCTTGGAAAGTTTGGGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: VCHSSRGRRASHCRR*TSHSVTKPWKVWGC Trigger: ACATCCCCAAACTTTCCAAGGTTTGGTTACACTGTGAGACGTTCATCTGCGACAGTGAGAAGCTCTCCTGCCCCGTGAACTGTGACAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000124545.2 |
||
| CDS-3UTR CAA 90 bp | GGCAGAGGTTCACCAAATTCACATCCACACACAAACATGGGGGAACACATATTTAGCATGCGCTTCCGTTaGTCACAGTTCACGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GRGSPNSHPHTNMGEHIFSMRFR*SQFTGQ Trigger: CTGCCCCGTGAACTGTGACAAACGGAAGCGCATGCT...AAATATGTGTTCCCCCATGTTTGTGTGTGGATGTGAATTTGGTGAACCTCTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| CDS-3UTR CAA 90 bp | TTTTATTTAGTCCATAGCACCAGGTTGAGATACAAGACCATACATCAGGATCAATGGAACCGGAAGGCATaGAATTGGAAAGTGGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FYLVHSTRLRYKTIHQDQWNRKA*NWKVAL Trigger: CAGGGCCACTTTCCAATTCAATGCCTTCCGGTTCCA...TTGATCCTGATGTATGGTCTTGTATCTCAACCTGGTGCTATGGACTAAATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025936.12 |
||
| CDS TCA 72 bp | CCGAGGGGGTGGCCCAGCAGCTATTCAAGACCACTTTaGACCGAACGCTTAGGCCTTTGGCTTCTACTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: PRGWPSSYSRPL*TERLGLWLLLP Trigger: CGGGAGTAGAAGCCAAAGGCCTAAGCGTTCGGTTCAAAGTGGTCTTGAATAGCTGCTGGGCCACCCCCTCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000124545.2 |
||
| CDS CAA 72 bp | GCCGAGGGGGTGGCCCAGCAGCTATTCAAGACCACTTaGAACCGAACGCTTAGGCCTTTGGCTTCTACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: AEGVAQQLFKTT*NRTLRPLASTP Trigger: GGGAGTAGAAGCCAAAGGCCTAAGCGTTCGGTTCAAAGTGGTCTTGAATAGCTGCTGGGCCACCCCCTCGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000124545.2 |
||
| CDS CAA 90 bp | TTCTGGAACCGGAAGGCATTGAATTGGAAAGTGGCCCTGTGGTCTTaGCCGTTCTCATGCACGAGGACTGTCTCATCGGTGGGGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: FWNRKALNWKVALWS*PFSCTRTVSSVGQP Trigger: GGGCTGCCCCACCGATGAGACAGTCCTCGTGCATGAGAACGGCAAAGACCACAGGGCCACTTTCCAATTCAATGCCTTCCGGTTCCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000124545.2 |
||
| CDS CAA 90 bp | TGCCCTGCCTGTGGTGCCTGTGGACACAGCCCAGGAGTACACATATaGGGCAATCAGCTTACTCCTCAGGGACAACTCCACAACCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: CPACGACGHSPGVHI*GNQLTPQGQLHNQD Trigger: GTCCTGGTTGTGGAGTTGTCCCTGAGGAGTAAGCTGATTGCCCAATATGTGTACTCCTGGGCTGTGTCCACAGGCACCACAGGCAGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124545.2 |
||
| CDS GCA 72 bp | ACTGTCTCATCGGTGGGGCAGCCCTTATTGATGAGCTaGCACTGTAAGGGGTACATGAAGTCAGCCGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TVSSVGQPLLMS*HCKGYMKSAEG Trigger: CCCCTCGGCTGACTTCATGTACCCCTTACAGTGGCAGCTCATCAATAAGGGCTGCCCCACCGATGAGACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000124545.2 |
||
| CDS GCA 72 bp | GAACATCTGAGAAGTCACAGAGGCCGGAAAATGCCCTaGCTGTGGTGCCTGTGGACACAGCCCAGGAGTACA | + |
|
Preference number: 6 (lower is better) Translates to: EHLRSHRGRKMP*LWCLWTQPRST Trigger: TGTACTCCTGGGCTGTGTCCACAGGCACCACAGGCAGGGCATTTTCCGGCCTCTGTGACTTCTCAGATGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124545.2 |
||
| CDS CAA 72 bp | ACACCTCCTGTCTGGTCACGTAGCATGCGCTTCCGTTaGTCACAGTTCACGGGGCAGGAGAGCTTCTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: TPPVWSRSMRFR*SQFTGQESFSL Trigger: CAGTGAGAAGCTCTCCTGCCCCGTGAACTGTGACAAACGGAAGCGCATGCTACGTGACCAGACAGGAGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000124545.2 |
||
| CDS GCA 72 bp | GAACATCTGAGAAGTCACAGAGGCCGGAAAATGCCCTaGTCCTCAGGGACAACTCCACAACCAGGACACCTC | + |
|
Preference number: 6 (lower is better) Translates to: EHLRSHRGRKMP*SSGTTPQPGHL Trigger: GAGGTGTCCTGGTTGTGGAGTTGTCCCTGAGGAGCAGGGCATTTTCCGGCCTCTGTGACTTCTCAGATGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS CCA 72 bp | CTCAGGGACAACTCCACAACCAGGACACCTCCTGTCTaGTCACGTAGCATGCGCTTCCGTTTGTCACAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LRDNSTTRTPPV*SRSMRFRLSQF Trigger: GAACTGTGACAAACGGAAGCGCATGCTACGTGACCAGACAGGAGGTGTCCTGGTTGTGGAGTTGTCCCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000124545.2 |
||
| CDS CCA 72 bp | CTGAGAAGTCACAGAGGCCGGAAAATGCCCTGCCTGTaGTGCCTGTGGACACAGCCCAGGAGTACACATATT | + |
|
Preference number: 6 (lower is better) Translates to: LRSHRGRKMPCL*CLWTQPRSTHI Trigger: AATATGTGTACTCCTGGGCTGTGTCCACAGGCACCACAGGCAGGGCATTTTCCGGCCTCTGTGACTTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124545.2 |
||
| CDS TCA 72 bp | AGTAGGTGGAGTGGTAGGTGCAGGAGAAGGAGTAGTTaGCGGGCTGGTTCTTCACGATCACTGTGCTGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: SRWSGRCRRRSS*RAGSSRSLCCR Trigger: ACGACAGCACAGTGATCGTGAAGAACCAGCCCGTCAACTACTCCTTCTCCTGCACCTACCACTCCACCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000154886.8 |
||
| CDS TCA 72 bp | GGTCCCCAGCATCAGGATGAGGTGAAGAAGAACATCTaGGAAGTCACAGAGGCCGGAAAATGCCCTGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GPQHQDEVKKNI*EVTEAGKCPAP Trigger: AGGAGCAGGGCATTTTCCGGCCTCTGTGACTTCTCAGATGTTCTTCTTCACCTCATCCTGATGCTGGGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS TCA 72 bp | GGTCCCCAGCATCAGGATGAGGTGAAGAAGAACATCTaGGAAGTCACAGAGGCCGGAAAATGCCCTGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GPQHQDEVKKNI*EVTEAGKCPAC Trigger: ACAGGCAGGGCATTTTCCGGCCTCTGTGACTTCTCAGATGTTCTTCTTCACCTCATCCTGATGCTGGGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124545.2 |
||
| CDS CCA 72 bp | TGTCGTTGGACACGATGTGGCTGTAGAAGTGGTAGATaGGGGGCTTGTACTCTGACTGGGTTCCACAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: CRWTRCGCRSGR*GACTLTGFHSR Trigger: CCTACTGTGGAACCCAGTCAGAGTACAAGCCCCCCATCTACCACTTCTACAGCCACATCGTGTCCAACGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000154886.8 |
||
| CDS CCA 72 bp | GTGGTGCCTGTGGACACAGCCCAGGAGTACACATATTaGGCAATCAGCTTACTCCTCAGGGACAACTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: VVPVDTAQEYTY*AISLLLRDNST Trigger: TGTGGAGTTGTCCCTGAGGAGTAAGCTGATTGCCCAATATGTGTACTCCTGGGCTGTGTCCACAGGCACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124545.2 |
||
| CDS CAA 72 bp | TGTGGTGCCTGTGGACACAGCCCAGGAGTACACATATaGGGCAATCAGCTTACTCCTCAGGGACAACTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: CGACGHSPGVHI*GNQLTPQGQLH Trigger: GTGGAGTTGTCCCTGAGGAGTAAGCTGATTGCCCAATATGTGTACTCCTGGGCTGTGTCCACAGGCACCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124545.2 |
||
| CDS TCA 72 bp | TACAACACAGCCCAGGTCCCCAGCATCAGGATGAGGTaGAGAAGAACATCTGAGAAGTCACAGAGGCCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: YNTAQVPSIRMR*RRTSEKSQRPE Trigger: TTCCGGCCTCTGTGACTTCTCAGATGTTCTTCTTCACCTCATCCTGATGCTGGGGACCTGGGCTGTGTTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 |
||
| CDS CCA 72 bp | TGGAACCGGAAGGCATTGAATTGGAAAGTGGCCCTGTaGTCTTTGCCGTTCTCATGCACGAGGACTGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: WNRKALNWKVAL*SLPFSCTRTVS Trigger: TGAGACAGTCCTCGTGCATGAGAACGGCAAAGACCACAGGGCCACTTTCCAATTCAATGCCTTCCGGTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000124545.2 |
||
| CDS TCA 72 bp | ACAACTGGCTTTCAAATGTGCCCATGCTCCCGTTCTTaGCGTGAACAGTGGCCACTCTCTGGTCAAAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: TTGFQMCPCSRS*REQWPLSGQKQ Trigger: CTGCTTTTGACCAGAGAGTGGCCACTGTTCACGTCAAGAACGGGAGCATGGGCACATTTGAAAGCCAGTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025936.12 ENSMUST00000154886.8 |
||
| CDS CCA 72 bp | AGTTTGGGGATGTTCTGGAACCGGAAGGCATTGAATTaGAAAGTGGCCCTGTGGTCTTTGCCGTTCTCATGC | + |
|
Preference number: 6 (lower is better) Translates to: SLGMFWNRKALN*KVALWSLPFSC Trigger: GCATGAGAACGGCAAAGACCACAGGGCCACTTTCCAATTCAATGCCTTCCGGTTCCAGAACATCCCCAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000124545.2 |
||
| CDS CAA 90 bp | AACCAAACCTTGGAAAGTTTGGGGATGTTCTGGAACCGGAAGGCATaGAATTGGAAAGTGGCCCTGTGGTCTTTGCCGTTCTCATGCACG | + |
|
Preference number: 6 (lower is better) Translates to: NQTLESLGMFWNRKA*NWKVALWSLPFSCT Trigger: CGTGCATGAGAACGGCAAAGACCACAGGGCCACTTTCCAATTCAATGCCTTCCGGTTCCAGAACATCCCCAAACTTTCCAAGGTTTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000124545.2 |
||
| CDS TCA 72 bp | AGTTCACGGGGCAGGAGAGCTTCTCACTGTCGCAGATaGACGTCTCACAGTGTAACCAAACCTTGGAAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SSRGRRASHCRR*TSHSVTKPWKV Trigger: AACTTTCCAAGGTTTGGTTACACTGTGAGACGTTCATCTGCGACAGTGAGAAGCTCTCCTGCCCCGTGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000124545.2 |
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| CDS CAA 72 bp | CTGTCGCAGATGAACGTCTCACAGTGTAACCAAACCTaGGAAAGTTTGGGGATGTTCTGGAACCGGAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LSQMNVSQCNQT*ESLGMFWNRKA Trigger: TGCCTTCCGGTTCCAGAACATCCCCAAACTTTCCAAGGTTTGGTTACACTGTGAGACGTTCATCTGCGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000124545.2 |
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| CDS CAA 90 bp | CTGTCGCAGATGAACGTCTCACAGTGTAACCAAACCTTGGAAAGTTaGGGGATGTTCTGGAACCGGAAGGCATTGAATTGGAAAGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: LSQMNVSQCNQTLES*GMFWNRKALNWKVA Trigger: GGCCACTTTCCAATTCAATGCCTTCCGGTTCCAGAACATCCCCAAACTTTCCAAGGTTTGGTTACACTGTGAGACGTTCATCTGCGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000124545.2 |
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| CDS TCA 72 bp | TGGCTTTCAAATGTGCCCATGCTCCCGTTCTTGACGTaGACAGTGGCCACTCTGAAAAGGGGAGAGAATTTT | + |
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Preference number: 6 (lower is better) Translates to: WLSNVPMLPFLT*TVATLKRGENF Trigger: AAAATTCTCTCCCCTTTTCAGAGTGGCCACTGTTCACGTCAAGAACGGGAGCATGGGCACATTTGAAAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120936.8 |
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| CDS CAA 72 bp | CTATTCAAGACCACTTTGAACCGAACGCTTAGGCCTTaGGCTTCTACTCCCGCAAACAGATCTGAGCCGATT | + |
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Preference number: 6 (lower is better) Translates to: LFKTTLNRTLRP*ASTPANRSEPI Trigger: AATCGGCTCAGATCTGTTTGCGGGAGTAGAAGCCAAAGGCCTAAGCGTTCGGTTCAAAGTGGTCTTGAATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000124545.2 |
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| CDS CAA 90 bp | AGCTTCTCACTGTCGCAGATGAACGTCTCACAGTGTAACCAAACCTaGGAAAGTTTGGGGATGTTCTGGAACCGGAAGGCATTGAATTGG | + |
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Preference number: 6 (lower is better) Translates to: SFSLSQMNVSQCNQT*ESLGMFWNRKALNW Trigger: CCAATTCAATGCCTTCCGGTTCCAGAACATCCCCAAACTTTCCAAGGTTTGGTTACACTGTGAGACGTTCATCTGCGACAGTGAGAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000124545.2 |
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| CDS CAA 72 bp | ATGAACGTCTCACAGTGTAACCAAACCTTGGAAAGTTaGGGGATGTTCTGGAACCGGAAGGCATTGAATTGG | + |
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Preference number: 6 (lower is better) Translates to: MNVSQCNQTLES*GMFWNRKALNW Trigger: CCAATTCAATGCCTTCCGGTTCCAGAACATCCCCAAACTTTCCAAGGTTTGGTTACACTGTGAGACGTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025936.12 ENSMUST00000120936.8 ENSMUST00000124545.2 |
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