RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TECTA (Mus musculus)

Ensembl gene IDs: ENSMUSG00000037705

Ensembl transcript IDs: ENSMUST00000042190.14, ENSMUST00000160940.2

Found 657 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCCAGTaGCTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGGGGG +
Preference number: 1 (lower is better)
Translates to: DGQGEVLQVYKHHLQ*LKLARQGGGHSRRG
Trigger: CCCCCTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR TCA 90 bp GGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCCAGTGACTaGAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGGGGGAGGA +
Preference number: 1 (lower is better)
Translates to: GRVRFSRSTNIISSD*SWHGKVEATAGGGG
Trigger: TCCTCCCCCTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR TCA 90 bp AGGTGGAGGCCACAGCAGGAGGGGGAGGAGCTAAGCAAAGTGAGCTaGGGGCAGTGTTGGCGAGGCTCCACAGAGAGAGACGCAACTTTA +
Preference number: 1 (lower is better)
Translates to: RWRPQQEGEELSKVS*GQCWRGSTERDATL
Trigger: TAAAGTTGCGTCTCTCTCTGTGGAGCCTCGCCAACACTGCCCTCAGCTCACTTTGCTTAGCTCCTCCCCCTCCTGCTGTGGCCTCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR GCA 90 bp CAGAGCTTTCCCTGGCTGGCTTCTGGCCTGAACCTAGGTACCCAGTaGCAGCTGTTTGGCATTGAGGGTAAGAGCGTGCTTTCCTCCCAT +
Preference number: 1 (lower is better)
Translates to: QSFPWLASGLNLGTQ*QLFGIEGKSVLSSH
Trigger: ATGGGAGGAAAGCACGCTCTTACCCTCAATGCCAAACAGCTGGCACTGGGTACCTAGGTTCAGGCCAGAAGCCAGCCAGGGAAAGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR CCA 90 bp TTGAGAAACCACTATTGCATACTGTGGAAGAGGAGCCAGGAACGTTaGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGT +
Preference number: 1 (lower is better)
Translates to: LRNHYCILWKRSQER*CPPDLTAGGRWREC
Trigger: ACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACGTTCCTGGCTCCTCTTCCACAGTATGCAATAGTGGTTTCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR CCA 90 bp CGTGCTTTCCTCCCATTGGCTTTGAGAAACCACTATTGCATACTGTaGAAGAGGAGCCAGGAACGTTGGTGTCCTCCAGATCTGACTGCT +
Preference number: 1 (lower is better)
Translates to: RAFLPLALRNHYCIL*KRSQERWCPPDLTA
Trigger: AGCAGTCAGATCTGGAGGACACCAACGTTCCTGGCTCCTCTTCCACAGTATGCAATAGTGGTTTCTCAAAGCCAATGGGAGGAAAGCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR-3UTR CCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCGCTGGCACGGCAAGGTaGAGGCCACAGCAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIAGTAR*RPQQEG
Trigger: CCCCTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGC...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR-3UTR CCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATGCTGGCACGGCAAGGTaGAGGCCACAGCAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHAGTAR*RPQQEG
Trigger: CCCCTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGC...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR-3UTR TCA 90 bp GTAAAATGTGAAGGGCTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCGGTGTCCTCCAGATCTaGCTGCTGGAGGAAGGTGGC +
Preference number: 2 (lower is better)
Translates to: VKCEGLGLRIGTGRVRFSGVLQI*LLEEGG
Trigger: GCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACC...GGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAGCCCTTCACATTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
3UTR-3UTR CCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCACTGCTGGAGGAAGGTaGCGTGAGTGTGAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNITAGGR*RECERL
Trigger: CAGCCTCTCACACTCACGCCACCTTCCTCCAGCAGT...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR-3UTR CCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCACTGCTGGAGGAAGGTaGCGTGAGTGTGAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLTAGGR*RECERL
Trigger: CAGCCTCTCACACTCACGCCACCTTCCTCCAGCAGT...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR-3UTR CCA 90 bp GTAAAATGTGAAGGGCTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGAGCCAGGAACGTTaGTGTCCTCCAGATCTGACT +
Preference number: 2 (lower is better)
Translates to: VKCEGLGLRIGTGRVRFSRSQER*CPPDLT
Trigger: AGTCAGATCTGGAGGACACCAACGTTCCTGGCTCCT...GGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAGCCCTTCACATTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
3UTR CAA 90 bp ACAGCAGGAGGGGGAGGAGCTAAGCAAAGTGAGCTGAGGGCAGTGTaGGCGAGGCTCCACAGAGAGAGACGCAACTTTAATTCAAAGTCA +
Preference number: 2 (lower is better)
Translates to: TAGGGGAKQSELRAV*ARLHRERRNFNSKS
Trigger: TGACTTTGAATTAAAGTTGCGTCTCTCTCTGTGGAGCCTCGCCAACACTGCCCTCAGCTCACTTTGCTTAGCTCCTCCCCCTCCTGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR-3UTR TCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCTGTGAGAGGCTGTTTTaGCTTGGGGACACACACTTT +
Preference number: 2 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNICERLF*LGDTHF
Trigger: AAAGTGTGTGTCCCCAAGTCAAAACAGCCTCTCACA...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR-3UTR TCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGTATACCTACAGGGACTaGAGAAAGCACCCTGAGTTC +
Preference number: 2 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQYTYRD*RKHPEF
Trigger: GAACTCAGGGTGCTTTCTTCAGTCCCTGTAGGTATA...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR-3UTR TCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGTGTGAGAGGCTGTTTTaGCTTGGGGACACACACTTT +
Preference number: 2 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQCERLF*LGDTHF
Trigger: AAAGTGTGTGTCCCCAAGTCAAAACAGCCTCTCACA...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR-3UTR GCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCAACCTAGGTACCCAGTaGCAGCTGTTTGGCATTGAG +
Preference number: 2 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLNLGTQ*QLFGIE
Trigger: CTCAATGCCAAACAGCTGGCACTGGGTACCTAGGTT...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR-3UTR TCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGATATACCTACAGGGACTaGAGAAAGCACCCTGAGTTC +
Preference number: 2 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARYTYRD*RKHPEF
Trigger: GAACTCAGGGTGCTTTCTTCAGTCCCTGTAGGTATA...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR-3UTR GCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGTTGAGAAACCACTATTaGATACTGTGGAAGAGGAGC +
Preference number: 2 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLLRNHY*ILWKRS
Trigger: GCTCCTCTTCCACAGTATGCAATAGTGGTTTCTCAA...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR-3UTR GCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCAACCTAGGTACCCAGTaGCAGCTGTTTGGCATTGAG +
Preference number: 2 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPNLGTQ*QLFGIE
Trigger: CTCAATGCCAAACAGCTGGCACTGGGTACCTAGGTT...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR-3UTR GCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGATTGAGAAACCACTATTaGATACTGTGGAAGAGGAGC +
Preference number: 2 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARLRNHY*ILWKRS
Trigger: GCTCCTCTTCCACAGTATGCAATAGTGGTTTCTCAA...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR-3UTR CCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGAGGCTGTTTTGACTTaGGGACACACACTTTTATAC +
Preference number: 2 (lower is better)
Translates to: AGQTNFSGQLSHQTSVAREAVLT*GHTLLY
Trigger: GTATAAAAGTGTGTGTCCCCAAGTCAAAACAGCCTC...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR-3UTR CCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCGAGGCTGTTTTGACTTaGGGACACACACTTTTATAC +
Preference number: 2 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPEAVLT*GHTLLY
Trigger: GTATAAAAGTGTGTGTCCCCAAGTCAAAACAGCCTC...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR-3UTR CAA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGGAGCTGAGGGCAGTGTaGGCGAGGCTCCACAGAGAG +
Preference number: 3 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEELRAV*ARLHRE
Trigger: CTCTCTGTGGAGCCTCGCCAACACTGCCCTCAGCTC...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR TCA 72 bp CCACAGCAGGAGGGGGAGGAGCTAAGCAAAGTGAGCTaGGGGCAGTGTTGGCGAGGCTCCACAGAGAGAGAC +
Preference number: 3 (lower is better)
Translates to: PQQEGEELSKVS*GQCWRGSTERD
Trigger: GTCTCTCTCTGTGGAGCCTCGCCAACACTGCCCTCAGCTCACTTTGCTTAGCTCCTCCCCCTCCTGCTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR TCA 72 bp GGAAGAGGAGCCAGGAACGTTGGTGTCCTCCAGATCTaGCTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGC +
Preference number: 3 (lower is better)
Translates to: GRGARNVGVLQI*LLEEGGVSVRG
Trigger: GCCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACGTTCCTGGCTCCTCTTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR-3UTR CAA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCGAGCTGAGGGCAGTGTaGGCGAGGCTCCACAGAGAG +
Preference number: 3 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLELRAV*ARLHRE
Trigger: CTCTCTGTGGAGCCTCGCCAACACTGCCCTCAGCTC...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR GCA 72 bp CCCTGGCTGGCTTCTGGCCTGAACCTAGGTACCCAGTaGCAGCTGTTTGGCATTGAGGGTAAGAGCGTGCTT +
Preference number: 3 (lower is better)
Translates to: PWLASGLNLGTQ*QLFGIEGKSVL
Trigger: AAGCACGCTCTTACCCTCAATGCCAAACAGCTGGCACTGGGTACCTAGGTTCAGGCCAGAAGCCAGCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR CCA 72 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTaGAGGCCACAGCAGGAGGGGGAGGAGCTAAGCAAA +
Preference number: 3 (lower is better)
Translates to: TSSPVTEAGTAR*RPQQEGEELSK
Trigger: TTTGCTTAGCTCCTCCCCCTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR-3UTR CAA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGGAGGAGCCAGGAACGTaGGTGTCCTCCAGATCTGAC +
Preference number: 3 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQEEPGT*VSSRSD
Trigger: GTCAGATCTGGAGGACACCAACGTTCCTGGCTCCTC...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR TCA 72 bp GGTGAGGTTCTCCAGGTCTACAAACATCATCTCCAGTaGCTGAAGCTGGCACGGCAAGGTGGAGGCCACAGC +
Preference number: 3 (lower is better)
Translates to: GEVLQVYKHHLQ*LKLARQGGGHS
Trigger: GCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGTTTGTAGACCTGGAGAACCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR CCA 72 bp GCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTaGCTGGCTTCTGGCCTGAACCTAGGTACCCAGTGC +
Preference number: 3 (lower is better)
Translates to: AFPSDFCSQSFP*LASGLNLGTQC
Trigger: GCACTGGGTACCTAGGTTCAGGCCAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR CCA 72 bp CACTATTGCATACTGTGGAAGAGGAGCCAGGAACGTTaGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGG +
Preference number: 3 (lower is better)
Translates to: HYCILWKRSQER*CPPDLTAGGRW
Trigger: CCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACGTTCCTGGCTCCTCTTCCACAGTATGCAATAGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR CCA 72 bp GTGTTCCAGAAACAGCGCGGGACAGACCAACTTTTCTaGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGC +
Preference number: 3 (lower is better)
Translates to: VFQKQRGTDQLF*PAFPSDFCSQS
Trigger: GCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCGCTGTTTCTGGAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR-3UTR CAA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCGTGCTTTCCTCCCATaGGCTTTGAGAAACCACTAT +
Preference number: 3 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHRAFLP*ALRNHY
Trigger: ATAGTGGTTTCTCAAAGCCAATGGGAGGAAAGCACG...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR GCA 72 bp CGTGCTTTCCTCCCATTGGCTTTGAGAAACCACTATTaGATACTGTGGAAGAGGAGCCAGGAACGTTGGTGT +
Preference number: 3 (lower is better)
Translates to: RAFLPLALRNHY*ILWKRSQERWC
Trigger: ACACCAACGTTCCTGGCTCCTCTTCCACAGTATGCAATAGTGGTTTCTCAAAGCCAATGGGAGGAAAGCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR CCA 72 bp CTCCCATTGGCTTTGAGAAACCACTATTGCATACTGTaGAAGAGGAGCCAGGAACGTTGGTGTCCTCCAGAT +
Preference number: 3 (lower is better)
Translates to: LPLALRNHYCIL*KRSQERWCPPD
Trigger: ATCTGGAGGACACCAACGTTCCTGGCTCCTCTTCCACAGTATGCAATAGTGGTTTCTCAAAGCCAATGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGGGGCCAGCACCACGCTaGTCACCACGGGTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEGPAPR*SPRVSP
Trigger: GGGGGAAACCCGTGGTGAGCAGCGTGGTGCTGGCCC...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCGGATCAGGTTGCGCCTaGAACAGCGGCAGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIGSGCA*NSGSAA
Trigger: CGCGGCGCTGCCGCTGTTTCAGGCGCAACCTGATCC...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCCTTCAGGCGGATGGCTaGGCAGCGGGGCTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNILQADG*AAGLAD
Trigger: GTCTGCCAGCCCCGCTGCGCAGCCATCCGCCTGAAG...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGAGCCGCGCACCCCACTaGGCAGGGCGCACTCCTCAT +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLSRAPH*AGRTPH
Trigger: ATGAGGAGTGCGCCCTGCGCAGTGGGGTGCGCGGCT...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGGCTGCGCAGCGGGGCTaGCAGACGCTCACACAGCTC +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLAAQRG*QTLTQL
Trigger: GAGCTGTGTGAGCGTCTGCCAGCCCCGCTGCGCAGC...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGCACTCTTCAGGCGGATaGCTGCGCAGCGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLHSSGG*LRSGAG
Trigger: GCCAGCCCCGCTGCGCAGCCATCCGCCTGAAGAGTG...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGGCCCGTCGACCCGGCTaGTGCAGATCTGCTCACAGC +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEARRPG*CRSAHS
Trigger: GCTGTGAGCAGATCTGCACCAGCCGGGTCGACGGGC...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGCCGACATGGCGGGCCTaGCATCGGGGCGGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQPTWRA*HRGGGS
Trigger: ACTTCCTCCGCCCCGATGGCAGGCCCGCCATGTCGG...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGCTTCAGGCGGATGGCTaGGCAGCGGGGCTGGCAGAC +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQLQADG*AAGLAD
Trigger: GTCTGCCAGCCCCGCTGCGCAGCCATCCGCCTGAAG...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCCGCGCACCCCACTaGGCAGGGCGCACTCCTCAT +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQSRAPH*AGRTPH
Trigger: ATGAGGAGTGCGCCCTGCGCAGTGGGGTGCGCGGCT...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGGTCCAGCACCGACATaGCGGGCCTGCCATCGGGGC +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARGPAPT*RACHRG
Trigger: GCCCCGATGGCAGGCCCGCCATGTCGGTGCTGGACC...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCGGTCCAGCACCGACATaGCGGGCCTGCCATCGGGGC +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLGPAPT*RACHRG
Trigger: GCCCCGATGGCAGGCCCGCCATGTCGGTGCTGGACC...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATGCTGCGCAGCGGGGCTaGCAGACGCTCACACAGCTC +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHAAQRG*QTLTQL
Trigger: GAGCTGTGTGAGCGTCTGCCAGCCCCGCTGCGCAGC...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGCACTCTTCAGGCGGATaGCTGCGCAGCGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQHSSGG*LRSGAG
Trigger: GCCAGCCCCGCTGCGCAGCCATCCGCCTGAAGAGTG...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGGCTCGCAGGTCCTGTTaGGACAATCCGCCCCCACAC +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERARRSC*DNPPPH
Trigger: GTGTGGGGGCGGATTGTCCCAACAGGACCTGCGAGC...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCGCCCGTCGACCCGGCTaGTGCAGATCTGCTCACAGC +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIARRPG*CRSAHS
Trigger: GCTGTGAGCAGATCTGCACCAGCCGGGTCGACGGGC...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCGGAGTGGCACAGTTCTaGGAGGCCGTCAGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIGVAQF*EAVRSE
Trigger: CTCGGACCTGACGGCCTCTCAGAACTGTGCCACTCC...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGGTACCTGGTTCTGGCTaGGCAGGCACACCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLVPGSG*AGTPSP
Trigger: GGGAGACGGTGTGCCTGCTCAGCCAGAACCAGGTAC...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGGGCGCACTCCTCATCTaGCTTGCATTGGCGTGGGTC +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEGALLI*LALAWV
Trigger: GACCCACGCCAATGCAAGTCAGATGAGGAGTGCGCC...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GTAAAATGTGAAGGGCTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGAGGTTTTGGTGCTaGAGCAGCCGCGCACCCCAC +
Preference number: 4 (lower is better)
Translates to: VKCEGLGLRIGTGRVRFSRRFWC*SSRAPH
Trigger: GTGGGGTGCGCGGCTGCTTCAGCACCAAAACCTCCT...GGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAGCCCTTCACATTTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS-3UTR GCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGCTTGGCAGAGGAGCGTaGCGTTGTCCCTCACACTGC +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQELGRGA*RCPSHC
Trigger: GCAGTGTGAGGGACAACGGCACGCTCCTCTGCCAAG...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGAGCGGCAGCGCCGCGTaGAGTCCCCATTCCAGAATA +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERSGSAA*SPHSRI
Trigger: TATTCTGGAATGGGGACTGCACGCGGCGCTGCCGCT...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCGGGCCAGCACCACGCTaGTCACCACGGGTTTCCCCC +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLGPAPR*SPRVSP
Trigger: GGGGGAAACCCGTGGTGAGCAGCGTGGTGCTGGCCC...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGCGGCTGGTGCAGATCTaGTCACAGCCGCCGTTGTCT +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQERLVQI*SQPPLS
Trigger: AGACAACGGCGGCTGTGAGCAGATCTGCACCAGCCG...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGACCCCGGAGCCAAGCTaGCCCTGCATCAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERTPEPS*PCIRLL
Trigger: AAGAAGCCTGATGCAGGGCCAGCTTGGCTCCGGGGT...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCGCACGAAGGCGCAGTTaGCAGGGAAGCGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIARRRS*QGSAGR
Trigger: CCTTCCTGCGCTTCCCTGCCAACTGCGCCTTCGTGC...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGATGAGCTCCCTGGGCTaGGCTTGGTGCCGAACAAGA +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERMSSLG*AWCRTR
Trigger: TCTTGTTCGGCACCAAGCTCAGCCCAGGGAGCTCAT...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGGGCCATCCGTCTTGTTaGGGAAGCCGCAGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERGHPSC*GSRSSQ
Trigger: CTGACTACTGCGGCTTCCTCAACAAGACGGATGGCC...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCGGATCAGGTTGCGCCTaGAACAGCGGCAGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPGSGCA*NSGSAA
Trigger: CGCGGCGCTGCCGCTGTTTCAGGCGCAACCTGATCC...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGGAGGTTTTGGTGCTaGAGCAGCCGCGCACCCCAC +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQRRFWC*SSRAPH
Trigger: GTGGGGTGCGCGGCTGCTTCAGCACCAAAACCTCCT...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCCCGACATGGCGGGCCTaGCATCGGGGCGGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPPTWRA*HRGGGS
Trigger: ACTTCCTCCGCCCCGATGGCAGGCCCGCCATGTCGG...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGGATGCCCCTCAAAGTTaGAGCCGCACTCGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLDAPQS*SRTRSE
Trigger: CTCGGAGCGAGTGCGGCTGCAACTTTGAGGGGCATC...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GTAAAATGTGAAGGGCTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGCGGCAGCGCCGCGTaGAGTCCCCATTCCAGAATA +
Preference number: 4 (lower is better)
Translates to: VKCEGLGLRIGTGRVRFSSGSAA*SPHSRI
Trigger: TATTCTGGAATGGGGACTGCACGCGGCGCTGCCGCT...GGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAGCCCTTCACATTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS-3UTR GCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGCACTTCCATCTGGGCTaGCTTGCAGGTCACCTCCGC +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLHFHLG*LAGHLR
Trigger: GCGGAGGTGACCTGCAAGGCAGCCCAGATGGAAGTG...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGAGGCGTAGGCCTGAATaGCTTGGCAGAGGAGCGTGC +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLRRRPE*LGRGAC
Trigger: GCACGCTCCTCTGCCAAGCCATTCAGGCCTACGCCT...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GTAAAATGTGAAGGGCTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCACACCGTCTCCCGCTTaGGGAAGCAGCCCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: VKCEGLGLRIGTGRVRFSTPSPA*GSSPGN
Trigger: GTTACCAGGGCTGCTTCCCCAAGCGGGAGACGGTGT...GGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAGCCCTTCACATTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS-3UTR CCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGTCCCCACAGCCCACCTaGCAGAAGGTGTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERSPQPT*QKVSLF
Trigger: GAAGAGAGACACCTTCTGCCAGGTGGGCTGTGGGGA...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCACTTTGGCACAGGATaGGCAGCGGTCCCCACAGCC +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHHFGTG*AAVPTA
Trigger: GGCTGTGGGGACCGCTGCCCATCCTGTGCCAAAGTG...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGTTGGTCTTCCAGCTCTaGGCCAGCACCACGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLLVFQL*ASTTLL
Trigger: GAGCAGCGTGGTGCTGGCCCAGAGCTGGAAGACCAA...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGGGCCATCCGTCTTGTTaGGGAAGCCGCAGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLGHPSC*GSRSSQ
Trigger: CTGACTACTGCGGCTTCCTCAACAAGACGGATGGCC...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCGGAGTGGCACAGTTCTaGGAGGCCGTCAGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLGVAQF*EAVRSE
Trigger: CTCGGACCTGACGGCCTCTCAGAACTGTGCCACTCC...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGTCCGGCAGGTCTTGTTaGAGCAGTAGACATCCCCTC +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERSGRSC*SSRHPL
Trigger: GAGGGGATGTCTACTGCTTCAACAAGACCTGCCGGA...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGTACCTGGTTCTGGCTaGGCAGGCACACCGTCTCCC +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARVPGSG*AGTPSP
Trigger: GGGAGACGGTGTGCCTGCTCAGCCAGAACCAGGTAC...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGGTCACTGCGATTCCTTaGGTCTGGCAAGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERVTAIP*VWQVLA
Trigger: TGCCAGCACTTGCCAGACTCAAGGAATCGCAGTGAC...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGTGGTCTCCACTGGGCTaGAGTAGAAGAACCGACCCT +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEWSPLG*SRRTDP
Trigger: AGGGTCGGTTCTTCTACTGCAGCCCAGTGGAGACCA...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGCTTGGCAGAGGAGCGTaGCGTTGTCCCTCACACTGC +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQLGRGA*RCPSHC
Trigger: GCAGTGTGAGGGACAACGGCACGCTCCTCTGCCAAG...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGGCTCGGAGTCATTGTTaGAGGCCTTCAGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLARSHC*RPSAGP
Trigger: GGGACCTGCTGAAGGCCTGCAACAATGACTCCGAGC...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGGCCCACCTCCACATCTaGATTCTTGCAAGCACTGGC +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEAHLHI*ILASTG
Trigger: GCCAGTGCTTGCAAGAATGCAGATGTGGAGGTGGGC...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCACAGAGGCCATAGGTaGCGTTCTGCATGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHHRGHR*RSACSG
Trigger: CCCGGAGCATGCAGAACGGCACCTATGGCCTCTGTG...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGCACAGAGGCCATAGGTaGCGTTCTGCATGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQHRGHR*RSACSG
Trigger: CCCGGAGCATGCAGAACGGCACCTATGGCCTCTGTG...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGAGAAGAACCGACCCTTaGGTTCGCACACCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQERRTDP*VRTPRR
Trigger: CCTACGAGGTGTGCGAACCCAAGGGTCGGTTCTTCT...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCAGCCTGGGATGGAAATaGAGGCGTAGTGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNISLGWK*RRSAGR
Trigger: ACGGCCAGCACTACGCCTCCATTTCCATCCCAGGCT...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGACCCCGGAGCCAAGCTaGCCCTGCATCAGGCTTCTT +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQTPEPS*PCIRLL
Trigger: AAGAAGCCTGATGCAGGGCCAGCTTGGCTCCGGGGT...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATAGCTGTCCACACAGATaGGGCCCAAGGCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHSCPHR*GPRPGS
Trigger: AGACCCTGGCCTTGGGCCCCATCTGTGTGGACAGCT...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGCGTCCCTGCAGGGAATaGTCTCACAGTGGACACTGT +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERRPCRE*SHSGHC
Trigger: ACAGTGTCCACTGTGAGACCATTCCCTGCAGGGACG...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGCGTCCCTGCAGGGAATaGTCTCACAGTGGACACTGT +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQERPCRE*SHSGHC
Trigger: ACAGTGTCCACTGTGAGACCATTCCCTGCAGGGACG...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATTTGGTCTTCCAGCTCTaGGCCAGCACCACGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHLVFQL*ASTTLL
Trigger: GAGCAGCGTGGTGCTGGCCCAGAGCTGGAAGACCAA...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTCGCAGGTCCTGTTaGGACAATCCGCCCCCACAC +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARARRSC*DNPPPH
Trigger: GTGTGGGGGCGGATTGTCCCAACAGGACCTGCGAGC...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCGTGAAGCTGCCCTCCTaGGTCGGAACTGTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIVKLPS*VGTVRL
Trigger: CAACCTGACAGTTCCGACCCAGGAGGGCAGCTTCAC...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGGCCAAAATGGATACATaGGCTCCCTGGGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERAKMDT*APWAEL
Trigger: AAGCTCAGCCCAGGGAGCTCATGTATCCATTTTGGC...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGACACACTGGCTGGTGCTaGGGACAAAGCCCTCGTTGC +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARHTGWC*GQSPRC
Trigger: GCAACGAGGGCTTTGTCCTCAGCACCAGCCAGTGTG...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGTCCGGCAGGTCTTGTTaGAGCAGTAGACATCCCCTC +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLSGRSC*SSRHPL
Trigger: GAGGGGATGTCTACTGCTTCAACAAGACCTGCCGGA...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGCGACGCCTCCTATCTTaGCCTCTTGGTCAGCCACGA +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQRRLLS*PLGQPR
Trigger: TCGTGGCTGACCAAGAGGTCAAGATAGGAGGCGTCG...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCGGCTCCGGTAGAACTTaGGCAGCTCGGAGTCATTGT +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIGSGRT*AARSHC
Trigger: ACAATGACTCCGAGCTGCTCAAGTTCTACCGGAGCC...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGAGAATCACACAGCTCTaGCTCATTGCCTCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQERITQL*LIASAL
Trigger: CAGAGCGGAGGCAATGAGTCAGAGCTGTGTGATTCT...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGGGTAGCCATCAAAGGTaGGGTAGTGACCATAGCCTG +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERGSHQR*GSDHSL
Trigger: CAGGCTATGGTCACTACCTCACCTTTGATGGCTACC...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCGTCACTGCGATTCCTTaGGTCTGGCAAGTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIVTAIP*VWQVLA
Trigger: TGCCAGCACTTGCCAGACTCAAGGAATCGCAGTGAC...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCTGCAGCTCTTGCCATTaGGGACGTAGCCTGCATCAC +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNICSSCH*GRSLHH
Trigger: GTGATGCAGGCTACGTCCTCAATGGCAAGAGCTGCA...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGTTTCTGGCAGATGGTTaGGAGCACGAAGGCGCAGTT +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEFLADG*EHEGAV
Trigger: AACTGCGCCTTCGTGCTCTCAACCATCTGCCAGAAA...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGAGCCCTTCATGTCGGTaGGTTTCAGGCAGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLSPSCR*VSGSSR
Trigger: ACGGCTACTGCCTGAAACTCACCGACATGAAGGGCT...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGAGCACTGCCGGTCATTaGTTCTCACACCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQESTAGH*FSHPLS
Trigger: AGAGAGAGGGTGTGAGAATCAATGACCGGCAGTGCT...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGTGGTCTCCACTGGGCTaGAGTAGAAGAACCGACCCT +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLWSPLG*SRRTDP
Trigger: AGGGTCGGTTCTTCTACTGCAGCCCAGTGGAGACCA...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCCGTTGTCCCTCACACTaGACAGGTCGTACACACAGC +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIRCPSH*TGRTHS
Trigger: GCTGTGTGTACGACCTGTGCAGTGTGAGGGACAACG...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GTAAAATGTGAAGGGCTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGTCTCCGATTGGGATaGCAAGGGCTTGGCACACCA +
Preference number: 4 (lower is better)
Translates to: VKCEGLGLRIGTGRVRFSSLRLG*QGLGTP
Trigger: TGGTGTGCCAAGCCCTTGGCATCCCAATCGGAGACT...GGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAGCCCTTCACATTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS-3UTR GCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGAGTCTCCGATTGGGATaGCAAGGGCTTGGCACACCA +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLSLRLG*QGLGTP
Trigger: TGGTGTGCCAAGCCCTTGGCATCCCAATCGGAGACT...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGGCTCGGAGTCATTGTTaGAGGCCTTCAGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQARSHC*RPSAGP
Trigger: GGGACCTGCTGAAGGCCTGCAACAATGACTCCGAGC...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGACAGCTCTGACTCATTaGCTCCGCTCTGGCACAGGC +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQTALTH*LRSGTG
Trigger: GCCTGTGCCAGAGCGGAGGCAATGAGTCAGAGCTGT...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGCCACATCTGCATTCTTaGAAGCACTGGCATAGCGGG +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERPHLHS*KHWHSG
Trigger: CCCGCTATGCCAGTGCTTGCAAGAATGCAGATGTGG...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCCTCGTTGATACTCAGTaGAGGCAGCCCCATGGGCAT +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNILVDTQ*RQPHGH
Trigger: ATGCCCATGGGGCTGCCTGCACTGAGTATCAACGAG...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGACAGCTGCAGGCTGTCTaGACGGCACCCCCATCGATA +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARQLQAV*TAPPSI
Trigger: TATCGATGGGGGTGCCGTGCAGACAGCCTGCAGCTG...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCCAGCTGCAGGCTGTCTaGACGGCACCCCCATCGATA +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLQLQAV*TAPPSI
Trigger: TATCGATGGGGGTGCCGTGCAGACAGCCTGCAGCTG...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCCACTTCCATCTGGGCTaGCTTGCAGGTCACCTCCGC +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLHFHLG*LAGHLR
Trigger: GCGGAGGTGACCTGCAAGGCAGCCCAGATGGAAGTG...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGACGGCTGGTGCAGATCTaGTCACAGCCGCCGTTGTCT +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARRLVQI*SQPPLS
Trigger: AGACAACGGCGGCTGTGAGCAGATCTGCACCAGCCG...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCAGAAGAACCGACCCTTaGGTTCGCACACCTCGTAGG +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIRRTDP*VRTPRR
Trigger: CCTACGAGGTGTGCGAACCCAAGGGTCGGTTCTTCT...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCCTGGGATGGAAATaGAGGCGTAGTGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQSLGWK*RRSAGR
Trigger: ACGGCCAGCACTACGCCTCCATTTCCATCCCAGGCT...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGAGTAGAGGGCCTCAGTaGCTGCATCACACTGAGTAC +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQESRGPQ*LHHTEY
Trigger: GTACTCAGTGTGATGCAGCCACTGAGGCCCTCTACT...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCAGGCGTAGGCCTGAATaGCTTGGCAGAGGAGCGTGC +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLRRRPE*LGRGAC
Trigger: GCACGCTCCTCTGCCAAGCCATTCAGGCCTACGCCT...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGTCTCCAGTCTCCGATTaGGATGCCAAGGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLSPVSD*DAKGLA
Trigger: TGCCAAGCCCTTGGCATCCCAATCGGAGACTGGAGA...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAACACCGTCTCCCGCTTaGGGAAGCAGCCCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARTPSPA*GSSPGN
Trigger: GTTACCAGGGCTGCTTCCCCAAGCGGGAGACGGTGT...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGTGTAGTACCTGGTTCTaGCTGAGCAGGCACACCGTC +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLCSTWF*LSRHTV
Trigger: GACGGTGTGCCTGCTCAGCCAGAACCAGGTACTACA...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGCCTATCTTGACCTCTTaGTCAGCCACGAGGATCCGA +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEPILTS*SATRIR
Trigger: TCGGATCCTCGTGGCTGACCAAGAGGTCAAGATAGG...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGACATTAACCACCCCATaGCACTCCAGGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERTLTTP*HSRKEL
Trigger: CAGCTCCTTCCTGGAGTGCCATGGGGTGGTTAATGT...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAAGCTGTCCACACAGATaGGGCCCAAGGCCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARSCPHR*GPRPGS
Trigger: AGACCCTGGCCTTGGGCCCCATCTGTGTGGACAGCT...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGGTGCAGGCAGCCCCATaGGCATCTCAAGGTCATCAT +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLVQAAP*ASQGHH
Trigger: ATGATGACCTTGAGATGCCCATGGGGCTGCCTGCAC...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATTCCCCACAGCCCACCTaGCAGAAGGTGTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHSPQPT*QKVSLF
Trigger: GAAGAGAGACACCTTCTGCCAGGTGGGCTGTGGGGA...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGAGAAACCTTCCACTTTaGCACAGGATGGGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERRNLPL*HRMGSG
Trigger: ACCGCTGCCCATCCTGTGCCAAAGTGGAAGGTTTCT...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGGCAAAGCCAGCATTCTaGTTGGGGATCAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLAKPAF*LGIRLH
Trigger: GTGCAGCCTGATCCCCAACCAGAATGCTGGCTTTGC...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGGCAATTTCTGGCAGATaGTTGAGAGCACGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEAISGR*LRARRR
Trigger: GCGCCTTCGTGCTCTCAACCATCTGCCAGAAATTGC...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGGCAATTTCTGGCAGATaGTTGAGAGCACGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERAISGR*LRARRR
Trigger: GCGCCTTCGTGCTCTCAACCATCTGCCAGAAATTGC...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATGGACACTTCCATCTaGGCTGCCTTGCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIMDTSI*AALQVT
Trigger: GGTGACCTGCAAGGCAGCCCAGATGGAAGTGTCCAT...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGGTGAAGCTGCCCTCCTaGGTCGGAACTGTCAGGTTG +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQVKLPS*VGTVRL
Trigger: CAACCTGACAGTTCCGACCCAGGAGGGCAGCTTCAC...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCATGAGCTCCCTGGGCTaGGCTTGGTGCCGAACAAGA +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLMSSLG*AWCRTR
Trigger: TCTTGTTCGGCACCAAGCTCAGCCCAGGGAGCTCAT...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCGCCAAAATGGATACATaGGCTCCCTGGGCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIAKMDT*APWAEL
Trigger: AAGCTCAGCCCAGGGAGCTCATGTATCCATTTTGGC...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCCCCCCAACTCTAAGGTaGCGGGCAAAGAAGTCACTA +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIPPTLR*RAKKSL
Trigger: TAGTGACTTCTTTGCCCGTCACCTTAGAGTTGGGGG...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCAGAATCACACAGCTCTaGCTCATTGCCTCCGCTCTG +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIRITQL*LIASAL
Trigger: CAGAGCGGAGGCAATGAGTCAGAGCTGTGTGATTCT...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGTGCAGCTCTTGCCATTaGGGACGTAGCCTGCATCAC +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQCSSCH*GRSLHH
Trigger: GTGATGCAGGCTACGTCCTCAATGGCAAGAGCTGCA...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCGGCGCACTCCTCATCTaGCTTGCATTGGCGTGGGTC +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPGALLI*LALAWV
Trigger: GACCCACGCCAATGCAAGTCAGATGAGGAGTGCGCC...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCCCTTCATGTCGGTaGGTTTCAGGCAGTAGCCGT +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQSPSCR*VSGSSR
Trigger: ACGGCTACTGCCTGAAACTCACCGACATGAAGGGCT...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGATTAAATCCTGCCTGTaGCATCACACCTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEIKSCL*HHTSKA
Trigger: GGCCTTGGAGGTGTGATGGCACAGGCAGGATTTAAT...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATTCACAGCCGCACTTGTaGAAAGGGACACACTGGCTG +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHSQPHL*KGTHWL
Trigger: CAGCCAGTGTGTCCCTTTGCACAAGTGCGGCTGTGA...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGTCACAGCCGCACTTGTaGAAAGGGACACACTGGCTG +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQSQPHL*KGTHWL
Trigger: CAGCCAGTGTGTCCCTTTGCACAAGTGCGGCTGTGA...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCGATGCCCCTCAAAGTTaGAGCCGCACTCGCTCCGAG +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPDAPQS*SRTRSE
Trigger: CTCGGAGCGAGTGCGGCTGCAACTTTGAGGGGCATC...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGCCAGAAACCCCTCGCTaGTGTAGATTTTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEPETPR*CRFWLP
Trigger: TGGCAACCAAAATCTACAGCAGCGAGGGGTTTCTGG...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGTGCAGCTCTTCTGCATaGCATTGGTCTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERCSSSA*HWSSSS
Trigger: AGAGCTGGAAGACCAATGGCATGCAGAAGAGCTGCA...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGTCGTTGCAGCTCTTCTaGATGCCATTGGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQESLQLF*MPLVFQ
Trigger: CTGGAAGACCAATGGCATGCAGAAGAGCTGCAACGA...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGCACATCTGCCCAGAATaGAGCAATGAAGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQHICPE*SNEGPP
Trigger: GGGAGGGCCTTCATTGCTCCATTCTGGGCAGATGTG...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCACATCTGCCCAGAATaGAGCAATGAAGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHHICPE*SNEGPP
Trigger: GGGAGGGCCTTCATTGCTCCATTCTGGGCAGATGTG...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATTGGCTCTTCTCAGGATaGCGGGGTCCATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHWLFSG*RGPWFL
Trigger: GAGAAACCATGGACCCCGCCATCCTGAGAAGAGCCA...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATGTAATGGCTGAAGCTTaGGCACCGCACGGTAGACAC +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHVMAEA*APHGRH
Trigger: GTGTCTACCGTGCGGTGCCCAAGCTTCAGCCATTAC...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGTGCAAAGGGACACACTaGCTGGTGCTGAGGACAAAG +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLCKGTH*LVLRTK
Trigger: CTTTGTCCTCAGCACCAGCCAGTGTGTCCCTTTGCA...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGCTGTACAATTGGCGGTaGCCCAGAAGAACTCGCCCA +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQLYNWR*PRRTRP
Trigger: TGGGCGAGTTCTTCTGGGCCACCGCCAATTGTACAG...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGACTGCACTGTACAATTaGCGGTGGCCCAGAAGAACT +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERTALYN*RWPRRT
Trigger: AGTTCTTCTGGGCCACCGCCAATTGTACAGTGCAGT...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGCATTCTTGCAAGCACTaGCATAGCGGGCCACAGAAT +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERHSCKH*HSGPQN
Trigger: ATTCTGTGGCCCGCTATGCCAGTGCTTGCAAGAATG...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGAAGATCTGGCAGTCCTaGTCTACCCAGAAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERKIWQS*STQKVS
Trigger: TGAGACCTTCTGGGTAGACCAGGACTGCCAGATCTT...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGTCACCCTGCATGGCCTaGATGTGCACATTGTCACAT +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQESPCMA*MCTLSH
Trigger: ATGTGACAATGTGCACATCCAGGCCATGCAGGGTGA...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATAGCCGTCACCCTGCATaGCCTGGATGTGCACATTGT +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHSRHPA*PGCAHC
Trigger: ACAATGTGCACATCCAGGCCATGCAGGGTGACGGCT...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGTTGAAGACGGTGACGTaGAAACGACAGGTTAGGGAC +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQELKTVT*KRQVRD
Trigger: GTCCCTAACCTGTCGTTTCCACGTCACCGTCTTCAA...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GTAAAATGTGAAGGGCTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCGAATCTTGTAGCCATTaGCCTCGACAGAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: VKCEGLGLRIGTGRVRFSESCSH*PRQRAP
Trigger: AGGAGCTCTCTGTCGAGGTCAATGGCTACAAGATTC...GGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAGCCCTTCACATTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS-3UTR TCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCGAATCTTGTAGCCATTaGCCTCGACAGAGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIESCSH*PRQRAP
Trigger: AGGAGCTCTCTGTCGAGGTCAATGGCTACAAGATTC...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCCGACGCCTCCTATCTTaGCCTCTTGGTCAGCCACGA +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPRRLLS*PLGQPR
Trigger: TCGTGGCTGACCAAGAGGTCAAGATAGGAGGCGTCG...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGACACTGGCATTGGCATTaGAGAAGCCACACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARHWHWH*RSHTGL
Trigger: GAGGCCTGTGTGGCTTCTTCAATGCCAATGCCAGTG...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCCACTGGCATTGGCATTaGAGAAGCCACACAGGCCTC +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLHWHWH*RSHTGL
Trigger: GAGGCCTGTGTGGCTTCTTCAATGCCAATGCCAGTG...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGGCTCCGGTAGAACTTaGGCAGCTCGGAGTCATTGT +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARGSGRT*AARSHC
Trigger: ACAATGACTCCGAGCTGCTCAAGTTCTACCGGAGCC...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGAGAAGAAGGTGGGGTTaGCTTTGCTGTGACATTTGG +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERRRRWG*LCCDIW
Trigger: CCAAATGTCACAGCAAAGTCAACCCCACCTTCTTCT...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGCCCCACACTCGCCATTaGAGATTTCCTCAAATGTTG +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERPHTRH*RFPQML
Trigger: CAACATTTGAGGAAATCTGCAATGGCGAGTGTGGGG...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCCACATCTGCATTCTTaGAAGCACTGGCATAGCGGG +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHPHLHS*KHWHSG
Trigger: CCCGCTATGCCAGTGCTTGCAAGAATGCAGATGTGG...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGAGTATTCATCGTCCCTaGAGGGAATGGTCTCACAGT +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQESIHRP*REWSHS
Trigger: ACTGTGAGACCATTCCCTGCAGGGACGATGAATACT...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATACGTTCACGTCCACCTaGTTCACCCACAAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHTFTST*FTHKAR
Trigger: TCTAGCCTTGTGGGTGAAGCAGGTGGACGTGAACGT...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGATCAGGCTGCACAGCTaGTGTACTTTGGAGAAACCT +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEIRLHS*CTLEKP
Trigger: AGGTTTCTCCAAAGTACAGCAGCTGTGCAGCCTGAT...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAATTGAGGACGTAGCCTaGATCACACTGGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARIEDVA*ITLAAL
Trigger: GAGGGCTGCCAGTGTGATGCAGGCTACGTCCTCAAT...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCATTGAGGACGTAGCCTaGATCACACTGGCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLIEDVA*ITLAAL
Trigger: GAGGGCTGCCAGTGTGATGCAGGCTACGTCCTCAAT...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGCCAGAAACCCCTCGCTaGTGTAGATTTTGGTTGCCA +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLPETPR*CRFWLP
Trigger: TGGCAACCAAAATCTACAGCAGCGAGGGGTTTCTGG...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGGCGAGAGGTCTCTTCTaGATGCCATTGGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQARGLF*MPLVFQ
Trigger: CTGGAAGACCAATGGCATGCAGAAGAGACCTCTCGC...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS-3UTR GCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGTGCATGGCCTGGATGTaGACATTGTCACATGTGGCT +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLCMAWM*TLSHVA
Trigger: AGCCACATGTGACAATGTGCACATCCAGGCCATGCA...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGGACTCTGGTGTAAACTaGCTCACTAGCACGTTGAAG +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERDSGVN*LTSTLK
Trigger: CTTCAACGTGCTAGTGAGCCAGTTTACACCAGAGTC...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGGACTCTGGTGTAAACTaGCTCACTAGCACGTTGAAG +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEDSGVN*LTSTLK
Trigger: CTTCAACGTGCTAGTGAGCCAGTTTACACCAGAGTC...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGATGGCTCTTCTCAGGATaGCGGGGTCCATGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARWLFSG*RGPWFL
Trigger: GAGAAACCATGGACCCCGCCATCCTGAGAAGAGCCA...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGGTACTGGTCTCCACTaGGCTGCAGTAGAAGAACCG +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARGTGLH*AAVEEP
Trigger: CGGTTCTTCTACTGCAGCCCAGTGGAGACCAGTACC...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGTGTAAGAGCCTGGGATaGAAATGGAGGCGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLCKSLG*KWRRSA
Trigger: AGCACTACGCCTCCATTTCCATCCCAGGCTCTTACA...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCTGTAAGAGCCTGGGATaGAAATGGAGGCGTAGTGCT +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNICKSLG*KWRRSA
Trigger: AGCACTACGCCTCCATTTCCATCCCAGGCTCTTACA...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATAGTAGAGGGCCTCAGTaGCTGCATCACACTGAGTAC +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHSRGPQ*LHHTEY
Trigger: GTACTCAGTGTGATGCAGCCACTGAGGCCCTCTACT...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCGTAATGGCTGAAGCTTaGGCACCGCACGGTAGACAC +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLVMAEA*APHGRH
Trigger: GTGTCTACCGTGCGGTGCCCAAGCTTCAGCCATTAC...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGTGCAAAGGGACACACTaGCTGGTGCTGAGGACAAAG +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQCKGTH*LVLRTK
Trigger: CTTTGTCCTCAGCACCAGCCAGTGTGTCCCTTTGCA...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGATGTAGTACCTGGTTCTaGCTGAGCAGGCACACCGTC +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARCSTWF*LSRHTV
Trigger: GACGGTGTGCCTGCTCAGCCAGAACCAGGTACTACA...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCAATGTGTGTAGTACCTaGTTCTGGCTGAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNINVCST*FWLSRH
Trigger: GTGCCTGCTCAGCCAGAACCAGGTACTACACACATT...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGAATGTGTGTAGTACCTaGTTCTGGCTGAGCAGGCAC +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLNVCST*FWLSRH
Trigger: GTGCCTGCTCAGCCAGAACCAGGTACTACACACATT...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGAGAAGGTCTCATTGGTaGCAAGTTGATGCCCCTCAA +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQERRSHW*QVDAPQ
Trigger: TTGAGGGGCATCAACTTGCCACCAATGAGACCTTCT...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGAGAAGGTCTCATTGGTaGCAAGTTGATGCCCCTCAA +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERRRSHW*QVDAPQ
Trigger: TTGAGGGGCATCAACTTGCCACCAATGAGACCTTCT...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGCCCAGAAGGTCTCATTaGTGGCAAGTTGATGCCCCT +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQPRRSH*WQVDAP
Trigger: AGGGGCATCAACTTGCCACCAATGAGACCTTCTGGG...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGGGAATGGTCTCACAGTaGACACTGTTGTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLGMVSQ*TLLSVP
Trigger: TGGCACAGACAACAGTGTCCACTGTGAGACCATTCC...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGGGTCTGGAAGTCAAATaGGTAGCCATCAAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERGLEVK*VAIKGE
Trigger: CTCACCTTTGATGGCTACCCATTTGACTTCCAGACC...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GTAAAATGTGAAGGGCTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCCTCTTCACCCAGCTCTaGCCAAACTCGTTGATACTC +
Preference number: 4 (lower is better)
Translates to: VKCEGLGLRIGTGRVRFSLFTQL*PNSLIL
Trigger: GAGTATCAACGAGTTTGGCCAGAGCTGGGTGAAGAG...GGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAGCCCTTCACATTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS-3UTR CCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCAAAGCCAGCATTCTaGTTGGGGATCAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARAKPAF*LGIRLH
Trigger: GTGCAGCCTGATCCCCAACCAGAATGCTGGCTTTGC...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGTCATCTGACTTGCATTaGCGTGGGTCACACTGGATC +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLSSDLH*RGSHWI
Trigger: GATCCAGTGTGACCCACGCCAATGCAAGTCAGATGA...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGATGTCTGGCAATTTCTaGCAGATGGTTGAGAGCACG +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERMSGNF*QMVEST
Trigger: CGTGCTCTCAACCATCTGCCAGAAATTGCCAGACAT...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATTCTGGATGTCGGGACTaGTGTCGATCACCAGAAACC +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHSGCRD*CRSPET
Trigger: GGTTTCTGGTGATCGACACCAGTCCCGACATCCAGA...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCGTAGCTCGTTGCAGCTaGGGGCGAGAGGTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPVARCS*GREVSS
Trigger: AGAAGAGACCTCTCGCCCCCAGCTGCAACGAGCTAC...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS-3UTR CCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCTCACCCTGCATGGCCTaGATGTGCACATTGTCACAT +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNISPCMA*MCTLSH
Trigger: ATGTGACAATGTGCACATCCAGGCCATGCAGGGTGA...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCTTGAAGACGGTGACGTaGAAACGACAGGTTAGGGAC +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNILKTVT*KRQVRD
Trigger: GTCCCTAACCTGTCGTTTCCACGTCACCGTCTTCAA...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGACCCCCAACTCTAAGGTaGCGGGCAAAGAAGTCACTA +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARPPTLR*RAKKSL
Trigger: TAGTGACTTCTTTGCCCGTCACCTTAGAGTTGGGGG...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GTAAAATGTGAAGGGCTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCGCTCAGGGCAGGTCTTaGGTAGGGTATATGATAACT +
Preference number: 4 (lower is better)
Translates to: VKCEGLGLRIGTGRVRFSAQGRS*VGYMIT
Trigger: AGTTATCATATACCCTACTCAAGACCTGCCCTGAGC...GGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAGCCCTTCACATTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS-3UTR TCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCAGCACTGCCGGTCATTaGTTCTCACACCCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLSTAGH*FSHPLS
Trigger: AGAGAGAGGGTGTGAGAATCAATGACCGGCAGTGCT...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGCCTAATGGGTCCCACTaGAATGATCTGTTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERPNGSH*NDLFFV
Trigger: CACAAAGAACAGATCATTTCAGTGGGACCCATTAGG...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGTCCATTGTGCACATCTaGCCAGAATGGAGCAATGAA +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQESIVHI*PEWSNE
Trigger: TTCATTGCTCCATTCTGGGCAGATGTGCACAATGGA...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGTCCACCATTAAATCCTaGCTGTGCCATCACACCTCC +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQSTIKS*LCHHTS
Trigger: GGAGGTGTGATGGCACAGGCAGGATTTAATGGTGGA...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCCGTTGTCCCTCACACTaGACAGGTCGTACACACAGC +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPRCPSH*TGRTHS
Trigger: GCTGTGTGTACGACCTGTGCAGTGTGAGGGACAACG...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGAGCCAAGCTGGCCCTaGATCAGGCTTCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVAREPSWP*IRLLLV
Trigger: AACAAGAAGAAGCCTGATGCAGGGCCAGCTTGGCTC...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCGAGCCAAGCTGGCCCTaGATCAGGCTTCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLEPSWP*IRLLLV
Trigger: AACAAGAAGAAGCCTGATGCAGGGCCAGCTTGGCTC...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGGGACACTGTTGTCTGTaGCATTGCAGTAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLGHCCL*HCSSRR
Trigger: TCTTCTGCTACTGCAATGGCACAGACAACAGTGTCC...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCCCCGGTGTATCACAATaGTGTAGCCAAACACGTTCA +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIPGVSQ*CSQTRS
Trigger: TGAACGTGTTTGGCTACAGCATTGTGATACACCGGG...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCCTCGTTGATACTCAGTaGAGGCAGCCCCATGGGCAT +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPLVDTQ*RQPHGH
Trigger: ATGCCCATGGGGCTGCCTGCACTGAGTATCAACGAG...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GTAAAATGTGAAGGGCTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCGGATGGCGGGGTCCATaGTTTCTCTGTAATAGATCT +
Preference number: 4 (lower is better)
Translates to: VKCEGLGLRIGTGRVRFSGWRGP*FLCNRS
Trigger: AGATCTATTACAGAGAAACCATGGACCCCGCCATCC...GGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAGCCCTTCACATTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS-3UTR CCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCGGTACTGGTCTCCACTaGGCTGCAGTAGAAGAACCG +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPGTGLH*AAVEEP
Trigger: CGGTTCTTCTACTGCAGCCCAGTGGAGACCAGTACC...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCATACCACACAGGTACTaGTCTCCACTGGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLIPHRY*SPLGCS
Trigger: ACTGCAGCCCAGTGGAGACCAGTACCTGTGTGGTAT...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAATACCACACAGGTACTaGTCTCCACTGGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARIPHRY*SPLGCS
Trigger: ACTGCAGCCCAGTGGAGACCAGTACCTGTGTGGTAT...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAAAGGTGTGGTAGTGTaGCTCCCCGAATACCACACA +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQKGVVV*LPEYHT
Trigger: TGTGTGGTATTCGGGGAGCCACACTACCACACCTTT...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGAACCTCCCCGAAGGATaGAAAAAGGGTAATTCCACA +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQENLPEG*KKGNST
Trigger: TGTGGAATTACCCTTTTTCCATCCTTCGGGGAGGTT...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCACATTAACCACCCCATaGCACTCCAGGAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLTLTTP*HSRKEL
Trigger: CAGCTCCTTCCTGGAGTGCCATGGGGTGGTTAATGT...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGATACACTCCTCAAAATaGCTGTTCTCCGGGCATTCT +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERIHSSK*LFSGHS
Trigger: AGAATGCCCGGAGAACAGCCATTTTGAGGAGTGTAT...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGATACACTCCTCAAAATaGCTGTTCTCCGGGCATTCT +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEIHSSK*LFSGHS
Trigger: AGAATGCCCGGAGAACAGCCATTTTGAGGAGTGTAT...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGACCCAGAAGGTCTCATTaGTGGCAAGTTGATGCCCCT +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARPRRSH*WQVDAP
Trigger: AGGGGCATCAACTTGCCACCAATGAGACCTTCTGGG...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAAGATCTGGCAGTCCTaGTCTACCCAGAAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQKIWQS*STQKVS
Trigger: TGAGACCTTCTGGGTAGACCAGGACTGCCAGATCTT...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATGGAATGGTCTCACAGTaGACACTGTTGTCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHGMVSQ*TLLSVP
Trigger: TGGCACAGACAACAGTGTCCACTGTGAGACCATTCC...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCGTGCAGGCAGCCCCATaGGCATCTCAAGGTCATCAT +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPVQAAP*ASQGHH
Trigger: ATGATGACCTTGAGATGCCCATGGGGCTGCCTGCAC...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAAGAAACCTTCCACTTTaGCACAGGATGGGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARRNLPL*HRMGSG
Trigger: ACCGCTGCCCATCCTGTGCCAAAGTGGAAGGTTTCT...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGACAGCTGCTGTACTTTaGAGAAACCTTCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERTAAVL*RNLPLW
Trigger: CCAAAGTGGAAGGTTTCTCCAAAGTACAGCAGCTGT...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCGAGTCTGGCAAGTGCTaGCATAGTTTTGTAACCAGC +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIESGKC*HSFVTS
Trigger: GCTGGTTACAAAACTATGCCAGCACTTGCCAGACTC...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GTAAAATGTGAAGGGCTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCATGTCTGGCAATTTCTaGCAGATGGTTGAGAGCACG +
Preference number: 4 (lower is better)
Translates to: VKCEGLGLRIGTGRVRFSMSGNF*QMVEST
Trigger: CGTGCTCTCAACCATCTGCCAGAAATTGCCAGACAT...GGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAGCCCTTCACATTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS-3UTR CCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGCTGGAAGGAGATGTCTaGCAATTTCTGGCAGATGGT +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLLEGDV*QFLADG
Trigger: ACCATCTGCCAGAAATTGCCAGACATCTCCTTCCAG...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCATGGACACTTCCATCTaGGCTGCCTTGCAGGTCACC +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPMDTSI*AALQVT
Trigger: GGTGACCTGCAAGGCAGCCCAGATGGAAGTGTCCAT...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGTGCCACAGTGAGATCTaGGTCATGATGAGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERCHSEI*VMMRRS
Trigger: ACTTCTTCTCATCATGACCCAGATCTCACTGTGGCA...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCAGCGTCCTGGAACATTaGCATTTGTGGTCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNISVLEH*HLWSLE
Trigger: TTCAAGAGACCACAAATGTCAATGTTCCAGGACGCT...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGAGTAGATCTCATTGTTaGAATCCAGACAGCGACACT +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQESRSHC*NPDSDT
Trigger: AGTGTCGCTGTCTGGATTTCAACAATGAGATCTACT...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGGCTCAGGGCAGGTCTTaGGTAGGGTATATGATAACT +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQAQGRS*VGYMIT
Trigger: AGTTATCATATACCCTACTCAAGACCTGCCCTGAGC...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCGGTAGCCATCAAAGGTaGGGTAGTGACCATAGCCTG +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPGSHQR*GSDHSL
Trigger: CAGGCTATGGTCACTACCTCACCTTTGATGGCTACC...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGAAGAAGGTGGGGTTaGCTTTGCTGTGACATTTGG +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQRRRWG*LCCDIW
Trigger: CCAAATGTCACAGCAAAGTCAACCCCACCTTCTTCT...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTTTCTGGCAGATGGTTaGGAGCACGAAGGCGCAGTT +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPFLADG*EHEGAV
Trigger: AACTGCGCCTTCGTGCTCTCAACCATCTGCCAGAAA...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCTGGGTCCCACTGAAATaGTCTGTTCTTTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIWVPLK*SVLCAL
Trigger: AAGAGCACAAAGAACAGATCATTTCAGTGGGACCCA...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCCCTAATGGGTCCCACTaGAATGATCTGTTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIPNGSH*NDLFFV
Trigger: CACAAAGAACAGATCATTTCAGTGGGACCCATTAGG...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGTCCATTGTGCACATCTaGCCAGAATGGAGCAATGAA +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLSIVHI*PEWSNE
Trigger: TTCATTGCTCCATTCTGGGCAGATGTGCACAATGGA...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCCCCCGAATTCCATTGTaGACATCTGCCCAGAATGGA +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLPRIPL*TSAQNG
Trigger: TCCATTCTGGGCAGATGTGCACAATGGAATTCGGGG...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCATTAAATCCTGCCTGTaGCATCACACCTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLIKSCL*HHTSKA
Trigger: GGCCTTGGAGGTGTGATGGCACAGGCAGGATTTAAT...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCTCCACCATTAAATCCTaGCTGTGCCATCACACCTCC +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLSTIKS*LCHHTS
Trigger: GGAGGTGTGATGGCACAGGCAGGATTTAATGGTGGA...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCGAGGGCCTCAGTGGCTaGATCACACTGAGTACAATT +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLEGLSG*ITLSTI
Trigger: AATTGTACTCAGTGTGATGCAGCCACTGAGGCCCTC...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGCCCCACACTCGCCATTaGAGATTTCCTCAAATGTTG +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQPHTRH*RFPQML
Trigger: CAACATTTGAGGAAATCTGCAATGGCGAGTGTGGGG...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATTGTTGTCTGTGCCATTaGAGTAGCAGAAGATCTGGC +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHCCLCH*SSRRSG
Trigger: GCCAGATCTTCTGCTACTGCAATGGCACAGACAACA...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCAGTCTGAGATTGGTCTaGTTCCTGTGGTGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLSLRLV*FLWCRG
Trigger: TCCTCTGCACCACAGGAAGCAGACCAATCTCAGACT...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCACGTTCACGTCCACCTaGTTCACCCACAAGGCTAGA +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPTFTST*FTHKAR
Trigger: TCTAGCCTTGTGGGTGAAGCAGGTGGACGTGAACGT...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCCTTGAGTCTGGCAAGTaGTGGCATAGTTTTGTAACC +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNILESGK*WHSFVT
Trigger: GGTTACAAAACTATGCCAGCACTTGCCAGACTCAAG...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGGCTGTAGATTTTGGTTaGCAAGCCCGTTATAAATGG +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECERAVDFG*QARYKW
Trigger: CCATTTATAACGGGCTTGGCAACCAAAATCTACAGC...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCTGCATGGCCTGGATGTaGACATTGTCACATGTGGCT +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLCMAWM*TLSHVA
Trigger: AGCCACATGTGACAATGTGCACATCCAGGCCATGCA...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAAAAGGTGTGGTAGTGTaGCTCCCCGAATACCACACA +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARKGVVV*LPEYHT
Trigger: TGTGTGGTATTCGGGGAGCCACACTACCACACCTTT...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GTAAAATGTGAAGGGCTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCGTTTATGTAAGAGCCTaGGATGGAAATGGAGGCGTA +
Preference number: 4 (lower is better)
Translates to: VKCEGLGLRIGTGRVRFSVYVRA*DGNGGV
Trigger: TACGCCTCCATTTCCATCCCAGGCTCTTACATAAAC...GGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAGCCCTTCACATTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS-3UTR CCA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGGAGGAAGTCATCCAGTaGATTTTTGTTGTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: RWCPPDLTAGGRWRECEREEVIQ*IFVVVP
Trigger: GGGAACTACAACAAAAATCCACTGGATGACTTCCTC...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCCCTATCTTGACCTCTTaGTCAGCCACGAGGATCCGA +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPPILTS*SATRIR
Trigger: TCGGATCCTCGTGGCTGACCAAGAGGTCAAGATAGG...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCAACCTCCCCGAAGGATaGAAAAAGGGTAATTCCACA +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNINLPEG*KKGNST
Trigger: TGTGGAATTACCCTTTTTCCATCCTTCGGGGAGGTT...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGACATTCTTGCAAGCACTaGCATAGCGGGCCACAGAAT +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARHSCKH*HSGPQN
Trigger: ATTCTGTGGCCCGCTATGCCAGTGCTTGCAAGAATG...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGACTCTTCACCCAGCTCTaGCCAAACTCGTTGATACTC +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARLFTQL*PNSLIL
Trigger: GAGTATCAACGAGTTTGGCCAGAGCTGGGTGAAGAG...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGTCCAGAATAGCTGCTTaGGCTCATAGTATTTGCCAT +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQESRIAA*AHSICH
Trigger: ATGGCAAATACTATGAGCCCAAGCAGCTATTCTGGA...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGATCATCTGACTTGCATTaGCGTGGGTCACACTGGATC +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARSSDLH*RGSHWI
Trigger: GATCCAGTGTGACCCACGCCAATGCAAGTCAGATGA...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCCTTGGGGAAAGAGTCTaGGATTGGTCTGCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPLGERV*DWSASC
Trigger: ACAGGAAGCAGACCAATCTCAGACTCTTTCCCCAAG...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGTGGGTCCCACTGAAATaGTCTGTTCTTTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQWVPLK*SVLCAL
Trigger: AAGAGCACAAAGAACAGATCATTTCAGTGGGACCCA...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGGTTCTCGTGTCATTCTaGCAAAATGGATACATGAGC +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLVLVSF*QNGYMS
Trigger: GCTCATGTATCCATTTTGGCAGAATGACACGAGAAC...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGACCCGTCAACTTTAAATaGCCAGCGTCCTGGAACATT +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARPVNFK*PASWNI
Trigger: AATGTTCCAGGACGCTGGGCATTTAAAGTTGACGGG...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGGACACTGTTGTCTGTaGCATTGCAGTAGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARGHCCL*HCSSRR
Trigger: TCTTCTGCTACTGCAATGGCACAGACAACAGTGTCC...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAAGTATTCATCGTCCCTaGAGGGAATGGTCTCACAGT +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARSIHRP*REWSHS
Trigger: ACTGTGAGACCATTCCCTGCAGGGACGATGAATACT...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCAGTCTGAGATTGGTCTaGTTCCTGTGGTGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPSLRLV*FLWCRG
Trigger: TCCTCTGCACCACAGGAAGCAGACCAATCTCAGACT...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAATCAGGCTGCACAGCTaGTGTACTTTGGAGAAACCT +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARIRLHS*CTLEKP
Trigger: AGGTTTCTCCAAAGTACAGCAGCTGTGCAGCCTGAT...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGGTTTATGTAAGAGCCTaGGATGGAAATGGAGGCGTA +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQVYVRA*DGNGGV
Trigger: TACGCCTCCATTTCCATCCCAGGCTCTTACATAAAC...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCGAGGAAGTCATCCAGTaGATTTTTGTTGTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIEEVIQ*IFVVVP
Trigger: GGGAACTACAACAAAAATCCACTGGATGACTTCCTC...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCAGAAGAACTCGCCCATaGTATAGTAGTGGCCATCGA +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLRRTRP*YSSGHR
Trigger: TCGATGGCCACTACTATACCATGGGCGAGTTCTTCT...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATACAGCTGCTGTACTTTaGAGAAACCTTCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHTAAVL*RNLPLW
Trigger: CCAAAGTGGAAGGTTTCTCCAAAGTACAGCAGCTGT...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTTTGCTGTGACATTTaGCAAAGCCAGCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHLCCDI*QSQHSG
Trigger: ACCAGAATGCTGGCTTTGCCAAATGTCACAGCAAAG...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCCTGGAAGGAGATGTCTaGCAATTTCTGGCAGATGGT +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLLEGDV*QFLADG
Trigger: ACCATCTGCCAGAAATTGCCAGACATCTCCTTCCAG...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGAAGTTGATGATGAGCTaGAAGGAGATGTCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLKLMMS*KEMSGN
Trigger: ATTGCCAGACATCTCCTTCCAGCTCATCATCAACTT...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGCAAGCCCGTTATAAATaGAACATTTACTTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEQARYK*NIYLCA
Trigger: GGCACACAAGTAAATGTTCCATTTATAACGGGCTTG...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGGCACATTGTCACATGTaGCTGCATACTGTGAGAACT +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQAHCHM*LHTVRT
Trigger: AGTTCTCACAGTATGCAGCCACATGTGACAATGTGC...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCCTCTCAAAGCCCAGCTaGAAGAGCTTGCACTTAGAT +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLLSKPS*KSLHLD
Trigger: ATCTAAGTGCAAGCTCTTCCAGCTGGGCTTTGAGAG...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGACTCTCAAAGCCCAGCTaGAAGAGCTTGCACTTAGAT +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARLSKPS*KSLHLD
Trigger: ATCTAAGTGCAAGCTCTTCCAGCTGGGCTTTGAGAG...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCTGTTGCCAGTGTTGTTaGCACTTTCAATCCAGATTG +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNICCQCC*HFQSRL
Trigger: CAATCTGGATTGAAAGTGCCAACAACACTGGCAACA...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGTGCCACAGTGAGATCTaGGTCATGATGAGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQCHSEI*VMMRRS
Trigger: ACTTCTTCTCATCATGACCCAGATCTCACTGTGGCA...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
3UTR CAA 72 bp GCGTGCTTTCCTCCCATTGGCTTTGAGAAACCACTATaGCATACTGTGGAAGAGGAGCCAGGAACGTTGGTG +
Preference number: 4 (lower is better)
Translates to: ACFPPIGFEKPL*HTVEEEPGTLV
Trigger: CACCAACGTTCCTGGCTCCTCTTCCACAGTATGCAATAGTGGTTTCTCAAAGCCAATGGGAGGAAAGCACGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCAGCGTCCTGGAACATTaGCATTTGTGGTCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLSVLEH*HLWSLE
Trigger: TTCAAGAGACCACAAATGTCAATGTTCCAGGACGCT...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCCAGGCTTCTTCTTGTTaGTGTCAATTTCCAAGTACT +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIQASSC*CQFPST
Trigger: AGTACTTGGAAATTGACATCAACAAGAAGAAGCCTG...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAATAGTATTTGCCATCTaGGTAGCAGCCACAGTTGTG +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARIVFAI*VAATVV
Trigger: CACAACTGTGGCTGCTACTCAGATGGCAAATACTAT...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGTTGTCTTTGATGTTCTaGCATCCTCCTTCGATGATG +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQLSLMF*HPPSMM
Trigger: CATCATCGAAGGAGGATGTCAGAACATCAAAGACAA...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATTTGTCTTTGATGTTCTaGCATCCTCCTTCGATGATG +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHLSLMF*HPPSMM
Trigger: CATCATCGAAGGAGGATGTCAGAACATCAAAGACAA...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGTTCTTTGTGCTCTTTTaGATAATCTGTGGCGATCCT +
Preference number: 4 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLFFVLF*IICGDP
Trigger: AGGATCGCCACAGATTATTCAAAAGAGCACAAAGAA...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCCCCGTCAACTTTAAATaGCCAGCGTCCTGGAACATT +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPPVNFK*PASWNI
Trigger: AATGTTCCAGGACGCTGGGCATTTAAAGTTGACGGG...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATTGGACTCCACAGTTGTaGTGTTCTTGTTTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHWTPQL*CSCFCE
Trigger: TTCACAGAAACAAGAACAGCACAACTGTGGAGTCCA...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCCTTGAGTCTGGCAAGTaGTGGCATAGTTTTGTAACC +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLLESGK*WHSFVT
Trigger: GGTTACAAAACTATGCCAGCACTTGCCAGACTCAAG...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCAAATGCCCAGCGTCCTaGAACATTGACATTTGTGGT +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLKCPAS*NIDICG
Trigger: ACCACAAATGTCAATGTTCCAGGACGCTGGGCATTT...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCAGAAGAACTCGCCCATaGTATAGTAGTGGCCATCGA +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPRRTRP*YSSGHR
Trigger: TCGATGGCCACTACTATACCATGGGCGAGTTCTTCT...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCGGTCTGGAAGTCAAATaGGTAGCCATCAAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPGLEVK*VAIKGE
Trigger: CTCACCTTTGATGGCTACCCATTTGACTTCCAGACC...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCCTTTGCTGTGACATTTaGCAAAGCCAGCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLLCCDI*QSQHSG
Trigger: ACCAGAATGCTGGCTTTGCCAAATGTCACAGCAAAG...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCGAGTCTGGCAAGTGCTaGCATAGTTTTGTAACCAGC +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPESGKC*HSFVTS
Trigger: GCTGGTTACAAAACTATGCCAGCACTTGCCAGACTC...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGCTTTTGAATAATCTGTaGCGATCCTGGAATTTTGTG +
Preference number: 4 (lower is better)
Translates to: TSSPVTEAGTARWRPQQELLNNL*RSWNFV
Trigger: CACAAAATTCCAGGATCGCCACAGATTATTCAAAAG...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCAGTAGATCTCATTGTTaGAATCCAGACAGCGACACT +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLSRSHC*NPDSDT
Trigger: AGTGTCGCTGTCTGGATTTCAACAATGAGATCTACT...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGTCTTCAACCACTCCTaGGCAATTCTCTTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARVFNHS*AILFLN
Trigger: ATTGAGAAAGAGAATTGCTCAGGAGTGGTTGAAGAC...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCGTCTTCAACCACTCCTaGGCAATTCTCTTTCTCAAT +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLVFNHS*AILFLN
Trigger: ATTGAGAAAGAGAATTGCTCAGGAGTGGTTGAAGAC...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATTTTTTATACATGATATaGGTGCCATTGGACTGCACG +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHFLYMI*VPLDCT
Trigger: CGTGCAGTCCAATGGCACTCATATCATGTATAAAAA...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGTTTTTATACATGATATaGGTGCCATTGGACTGCACG +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQFLYMI*VPLDCT
Trigger: CGTGCAGTCCAATGGCACTCATATCATGTATAAAAA...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAAGTCTAAGGAGATCTTaGTATCTAGCTCATAAGCGC +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARSLRRS*YLAHKR
Trigger: GCGCTTATGAGCTAGATATCAAGATCTCCTTAGACT...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCAGAAGTGTCCAAACTTaGAGTTCCACTGAAGAATTA +
Preference number: 4 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIRSVQT*SSTEEL
Trigger: TAATTCTTCAGTGGAACTTCAAGTTTGGACACTTCT...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCGTTCTCGTGTCATTCTaGCAAAATGGATACATGAGC +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLVLVSF*QNGYMS
Trigger: GCTCATGTATCCATTTTGGCAGAATGACACGAGAAC...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCTGGACTCCACAGTTGTaGTGTTCTTGTTTCTGTGAA +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLWTPQL*CSCFCE
Trigger: TTCACAGAAACAAGAACAGCACAACTGTGGAGTCCA...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTGTAGATTTTGGTTaGCAAGCCCGTTATAAATGG +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARAVDFG*QARYKW
Trigger: CCATTTATAACGGGCTTGGCAACCAAAATCTACAGC...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATAGCATTTTTATAGAGTaGCATCTTGGTGGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHSIFIE*HLGGEA
Trigger: AGCTTCACCACCAAGATGGCACTCTATAAAAATGCT...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCAAATGCCCAGCGTCCTaGAACATTGACATTTGTGGT +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPKCPAS*NIDICG
Trigger: ACCACAAATGTCAATGTTCCAGGACGCTGGGCATTT...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAAAGTTGATGATGAGCTaGAAGGAGATGTCTGGCAAT +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARKLMMS*KEMSGN
Trigger: ATTGCCAGACATCTCCTTCCAGCTCATCATCAACTT...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCGCACATTGTCACATGTaGCTGCATACTGTGAGAACT +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPAHCHM*LHTVRT
Trigger: AGTTCTCACAGTATGCAGCCACATGTGACAATGTGC...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGATGTTGCCAGTGTTGTTaGCACTTTCAATCCAGATTG +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARCCQCC*HFQSRL
Trigger: CAATCTGGATTGAAAGTGCCAACAACACTGGCAACA...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGACAGGCTTCTTCTTGTTaGTGTCAATTTCCAAGTACT +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARQASSC*CQFPST
Trigger: AGTACTTGGAAATTGACATCAACAAGAAGAAGCCTG...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGTTGGTGTTGTTGATTTaGAAGGAGATAAAATCCTCG +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQLVLLI*KEIKSS
Trigger: CGAGGATTTTATCTCCTTTCAAATCAACAACACCAA...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCAGTCTAAGGAGATCTTaGTATCTAGCTCATAAGCGC +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPSLRRS*YLAHKR
Trigger: GCGCTTATGAGCTAGATATCAAGATCTCCTTAGACT...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATAGAAGTGTCCAAACTTaGAGTTCCACTGAAGAATTA +
Preference number: 4 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHRSVQT*SSTEEL
Trigger: TAATTCTTCAGTGGAACTTCAAGTTTGGACACTTCT...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTCCAGAATAGCTGCTTaGGCTCATAGTATTTGCCAT +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPSRIAA*AHSICH
Trigger: ATGGCAAATACTATGAGCCCAAGCAGCTATTCTGGA...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCCAAGCCCGTTATAAATaGAACATTTACTTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLQARYK*NIYLCA
Trigger: GGCACACAAGTAAATGTTCCATTTATAACGGGCTTG...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGCTTTTGAATAATCTGTaGCGATCCTGGAATTTTGTG +
Preference number: 4 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQLLNNL*RSWNFV
Trigger: CACAAAATTCCAGGATCGCCACAGATTATTCAAAAG...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCACATTTGTGGTCTCTTaGATATTTACAATCTCAGGG +
Preference number: 4 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLTFVVS*IFTISG
Trigger: CCCTGAGATTGTAAATATTCAAGAGACCACAAATGT...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR TCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGATTGGTGTTGTTGATTTaGAAGGAGATAAAATCCTCG +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARLVLLI*KEIKSS
Trigger: CGAGGATTTTATCTCCTTTCAAATCAACAACACCAA...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR GCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCAGCATTTTTATAGAGTaGCATCTTGGTGGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPSIFIE*HLGGEA
Trigger: AGCTTCACCACCAAGATGGCACTCTATAAAAATGCT...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGATCCTGGAATTTTGTaGGCAATTAATCTTGCAAGA +
Preference number: 4 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARDPGIL*AINLAR
Trigger: TCTTGCAAGATTAATTGCCCACAAAATTCCAGGATC...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CCA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCGATCCTGGAATTTTGTaGGCAATTAATCTTGCAAGA +
Preference number: 4 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPDPGIL*AINLAR
Trigger: TCTTGCAAGATTAATTGCCCACAAAATTCCAGGATC...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp CGCAGGGCGCACTCCTCATCTGACTTGCATTGGCGTGGGTCACACTaGATCAGGTTGCGCCTGAAACAGCGGCAGCGCCGCGTGCAGTCC +
Preference number: 5 (lower is better)
Translates to: RRAHSSSDLHWRGSH*IRLRLKQRQRRVQS
Trigger: GGACTGCACGCGGCGCTGCCGCTGTTTCAGGCGCAACCTGATCCAGTGTGACCCACGCCAATGCAAGTCAGATGAGGAGTGCGCCCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp CTGGGGGCGAGAGGTCTCTTCTGCATGCCATTGGTCTTCCAGCTCTaGGCCAGCACCACGCTGCTCACCACGGGTTTCCCCCGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: LGARGLFCMPLVFQL*ASTTLLTTGFPRKV
Trigger: GACCTTGCGGGGGAAACCCGTGGTGAGCAGCGTGGTGCTGGCCCAGAGCTGGAAGACCAATGGCATGCAGAAGAGACCTCTCGCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS GCA 90 bp CGAAGGCGCAGTTGGCAGGGAAGCGCAGGAAGGCACCATCGAACGTaGGGAAGACACCACCCCCTGCCGCTAGGCAGTAGGAGGTTTTGG +
Preference number: 5 (lower is better)
Translates to: RRRSWQGSAGRHHRT*GRHHPLPLGSRRFW
Trigger: CCAAAACCTCCTACTGCCTAGCGGCAGGGGGTGGTGTCTTCCGCACGTTCGATGGTGCCTTCCTGCGCTTCCCTGCCAACTGCGCCTTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp CTACCCAGAAGGTCTCATTGGTGGCAAGTTGATGCCCCTCAAAGTTaGAGCCGCACTCGCTCCGAGGGACACACTGGCTGCCCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: LPRRSHWWQVDAPQS*SRTRSEGHTGCPAG
Trigger: CCCTGCAGGGCAGCCAGTGTGTCCCTCGGAGCGAGTGCGGCTGCAACTTTGAGGGGCATCAACTTGCCACCAATGAGACCTTCTGGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp GTCACACAGCTGCACAGAGGCCCGTCGACCCGGCTGGTGCAGATCTaGTCACAGCCGCCGTTGTCTTCACACCAGTCCAGCCTTTTTCTC +
Preference number: 5 (lower is better)
Translates to: VTQLHRGPSTRLVQI*SQPPLSSHQSSLFL
Trigger: GAGAAAAAGGCTGGACTGGTGTGAAGACAACGGCGGCTGTGAGCAGATCTGCACCAGCCGGGTCGACGGGCCTCTGTGCAGCTGTGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp CGATTGGGATGCCAAGGGCTTGGCACACCAAGGCGTAGGCCTGAATaGCTTGGCAGAGGAGCGTGCCGTTGTCCCTCACACTGCACAGGT +
Preference number: 5 (lower is better)
Translates to: RLGCQGLGTPRRRPE*LGRGACRCPSHCTG
Trigger: ACCTGTGCAGTGTGAGGGACAACGGCACGCTCCTCTGCCAAGCCATTCAGGCCTACGCCTTGGTGTGCCAAGCCCTTGGCATCCCAATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp GGTGCTGAGGACAAAGCCCTCGTTGCACTCGCAACCTTCCGTGCATaGAGTGGCACAGTTCTGAGAGGCCGTCAGGTCCGAGCAGGTGTC +
Preference number: 5 (lower is better)
Translates to: GAEDKALVALATFRA*SGTVLRGRQVRAGV
Trigger: GACACCTGCTCGGACCTGACGGCCTCTCAGAACTGTGCCACTCCATGCACGGAAGGTTGCGAGTGCAACGAGGGCTTTGTCCTCAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp CCTTCCACTTTGGCACAGGATGGGCAGCGGTCCCCACAGCCCACCTaGCAGAAGGTGTCTCTCTTCACCCAGCTCTGGCCAAACTCGTTG +
Preference number: 5 (lower is better)
Translates to: PSTLAQDGQRSPQPT*QKVSLFTQLWPNSL
Trigger: CAACGAGTTTGGCCAGAGCTGGGTGAAGAGAGACACCTTCTGCCAGGTGGGCTGTGGGGACCGCTGCCCATCCTGTGCCAAAGTGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp TGTAGCTCGTTGCAGCTCTTCTGCATGCCATTGGTCTTCCAGCTCTaGGCCAGCACCACGCTGCTCACCACGGGTTTCCCCCGCAAGGTC +
Preference number: 5 (lower is better)
Translates to: CSSLQLFCMPLVFQL*ASTTLLTTGFPRKV
Trigger: GACCTTGCGGGGGAAACCCGTGGTGAGCAGCGTGGTGCTGGCCCAGAGCTGGAAGACCAATGGCATGCAGAAGAGCTGCAACGAGCTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGCAGAGGAGCGTGCCGTaGTCCCTCACACTGCACAGG +
Preference number: 5 (lower is better)
Translates to: RWCPPDLTAGGRWRECERQRSVP*SLTLHR
Trigger: CCTGTGCAGTGTGAGGGACAACGGCACGCTCCTCTG...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGAGCACGAAGGCGCAGTaGGCAGGGAAGCGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: TSSPVTEAGTARWRPQQESTKAQ*AGKRRK
Trigger: CTTCCTGCGCTTCCCTGCCAACTGCGCCTTCGTGCT...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGTCCATCTGGGCTGCCTaGCAGGTCACCTCCGCGTCG +
Preference number: 5 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLSIWAA*QVTSAS
Trigger: CGACGCGGAGGTGACCTGCAAGGCAGCCCAGATGGA...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 90 bp ATGCGTAGGCGGCGCCATCAAATGTGTGTAGTACCTGGTTCTGGCTaGGCAGGCACACCGTCTCCCGCTTGGGGAAGCAGCCCTGGTAAC +
Preference number: 5 (lower is better)
Translates to: MRRRRHQMCVVPGSG*AGTPSPAWGSSPGN
Trigger: GTTACCAGGGCTGCTTCCCCAAGCGGGAGACGGTGTGCCTGCTCAGCCAGAACCAGGTACTACACACATTTGATGGCGCCGCCTACGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp AGTGTGGCTCCCCGAATACCACACAGGTACTGGTCTCCACTGGGCTaGAGTAGAAGAACCGACCCTTGGGTTCGCACACCTCGTAGGGGC +
Preference number: 5 (lower is better)
Translates to: SVAPRIPHRYWSPLG*SRRTDPWVRTPRRG
Trigger: GCCCCTACGAGGTGTGCGAACCCAAGGGTCGGTTCTTCTACTGCAGCCCAGTGGAGACCAGTACCTGTGTGGTATTCGGGGAGCCACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp GCCCTCTACGCAGTAGTGATTACAGTCACTCTTCAGGCGGATGGCTaGGCAGCGGGGCTGGCAGACGCTCACACAGCTCTCATAGTGGCT +
Preference number: 5 (lower is better)
Translates to: ALYAVVITVTLQADG*AAGLADAHTALIVA
Trigger: AGCCACTATGAGAGCTGTGTGAGCGTCTGCCAGCCCCGCTGCGCAGCCATCCGCCTGAAGAGTGACTGTAATCACTACTGCGTAGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp TCTTCTGCATGCCATTGGTCTTCCAGCTCTGGGCCAGCACCACGCTaGTCACCACGGGTTTCCCCCGCAAGGTCACGTAGTCGTCAGTCA +
Preference number: 5 (lower is better)
Translates to: SSACHWSSSSGPAPR*SPRVSPARSRSRQS
Trigger: TGACTGACGACTACGTGACCTTGCGGGGGAAACCCGTGGTGAGCAGCGTGGTGCTGGCCCAGAGCTGGAAGACCAATGGCATGCAGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp CACAGGTACTGGTCTCCACTGGGCTGCAGTAGAAGAACCGACCCTTaGGTTCGCACACCTCGTAGGGGCTACAGGAGGCCTCCTGACAGT +
Preference number: 5 (lower is better)
Translates to: HRYWSPLGCSRRTDP*VRTPRRGYRRPPDS
Trigger: ACTGTCAGGAGGCCTCCTGTAGCCCCTACGAGGTGTGCGAACCCAAGGGTCGGTTCTTCTACTGCAGCCCAGTGGAGACCAGTACCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp CCCTCACACTGCACAGGTCGTACACACAGCTGTGTACAAAAGCCGTaGCATCCACAACAGTGCCGCACTCCCACAGGGGGCCATCCGTCT +
Preference number: 5 (lower is better)
Translates to: PSHCTGRTHSCVQKP*HPQQCRTPTGGHPS
Trigger: AGACGGATGGCCCCCTGTGGGAGTGCGGCACTGTTGTGGATGCCACGGCTTTTGTACACAGCTGTGTGTACGACCTGTGCAGTGTGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp TCCCCACAGCCCACCTGGCAGAAGGTGTCTCTCTTCACCCAGCTCTaGCCAAACTCGTTGATACTCAGTGCAGGCAGCCCCATGGGCATC +
Preference number: 5 (lower is better)
Translates to: SPQPTWQKVSLFTQL*PNSLILSAGSPMGI
Trigger: GATGCCCATGGGGCTGCCTGCACTGAGTATCAACGAGTTTGGCCAGAGCTGGGTGAAGAGAGACACCTTCTGCCAGGTGGGCTGTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp GGATCAGGCTGCACAGCTGCTGTACTTTGGAGAAACCTTCCACTTTaGCACAGGATGGGCAGCGGTCCCCACAGCCCACCTGGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: GSGCTAAVLWRNLPL*HRMGSGPHSPPGRR
Trigger: CCTTCTGCCAGGTGGGCTGTGGGGACCGCTGCCCATCCTGTGCCAAAGTGGAAGGTTTCTCCAAAGTACAGCAGCTGTGCAGCCTGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp GGCAGCCCTCTACGCAGTAGTGATTACAGTCACTCTTCAGGCGGATaGCTGCGCAGCGGGGCTGGCAGACGCTCACACAGCTCTCATAGT +
Preference number: 5 (lower is better)
Translates to: GSPLRSSDYSHSSGG*LRSGAGRRSHSSHS
Trigger: ACTATGAGAGCTGTGTGAGCGTCTGCCAGCCCCGCTGCGCAGCCATCCGCCTGAAGAGTGACTGTAATCACTACTGCGTAGAGGGCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGCAGAGGAGCGTGCCGTaGTCCCTCACACTGCACAGG +
Preference number: 5 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLQRSVP*SLTLHR
Trigger: CCTGTGCAGTGTGAGGGACAACGGCACGCTCCTCTG...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCTGGGATGCCAAGGGCTaGGCACACCAAGGCGTAGGC +
Preference number: 5 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIWDAKG*AHQGVG
Trigger: GCCTACGCCTTGGTGTGCCAAGCCCTTGGCATCCCA...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGCACAGCTCTGACTCATaGCCTCCGCTCTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEHSSDS*PPLWHR
Trigger: CCTGTGCCAGAGCGGAGGCAATGAGTCAGAGCTGTG...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 90 bp CGAAGTCACAGCCGCACTTGTGCAAAGGGACACACTGGCTGGTGCTaGGGACAAAGCCCTCGTTGCACTCGCAACCTTCCGTGCATGGAG +
Preference number: 5 (lower is better)
Translates to: RSHSRTCAKGHTGWC*GQSPRCTRNLPCME
Trigger: CTCCATGCACGGAAGGTTGCGAGTGCAACGAGGGCTTTGTCCTCAGCACCAGCCAGTGTGTCCCTTTGCACAAGTGCGGCTGTGACTTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 90 bp CATCTGACTTGCATTGGCGTGGGTCACACTGGATCAGGTTGCGCCTaGAACAGCGGCAGCGCCGCGTGCAGTCCCCATTCCAGAATAGCT +
Preference number: 5 (lower is better)
Translates to: HLTCIGVGHTGSGCA*NSGSAACSPHSRIA
Trigger: AGCTATTCTGGAATGGGGACTGCACGCGGCGCTGCCGCTGTTTCAGGCGCAACCTGATCCAGTGTGACCCACGCCAATGCAAGTCAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp AGACACGCCAGCTCTCTCCTAGGTCCAGCACCGACATGGCGGGCCTaGCATCGGGGCGGAGGAAGTCATCCAGTGGATTTTTGTTGTAGT +
Preference number: 5 (lower is better)
Translates to: RHASSLLGPAPTWRA*HRGGGSHPVDFCCS
Trigger: ACTACAACAAAAATCCACTGGATGACTTCCTCCGCCCCGATGGCAGGCCCGCCATGTCGGTGCTGGACCTAGGAGAGAGCTGGCGTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp CTTGGCACACCAAGGCGTAGGCCTGAATGGCTTGGCAGAGGAGCGTaGCGTTGTCCCTCACACTGCACAGGTCGTACACACAGCTGTGTA +
Preference number: 5 (lower is better)
Translates to: LGTPRRRPEWLGRGA*RCPSHCTGRTHSCV
Trigger: TACACAGCTGTGTGTACGACCTGTGCAGTGTGAGGGACAACGGCACGCTCCTCTGCCAAGCCATTCAGGCCTACGCCTTGGTGTGCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp AAGCACTGGCATAGCGGGCCACAGAATCACACAGCTCTGACTCATTaGCTCCGCTCTGGCACAGGCGAAACAGGCAGGTGCGGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: KHWHSGPQNHTALTH*LRSGTGETGRCGSR
Trigger: CCTACTACCGCACCTGCCTGTTTCGCCTGTGCCAGAGCGGAGGCAATGAGTCAGAGCTGTGTGATTCTGTGGCCCGCTATGCCAGTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp TCAGTGCAGGCAGCCCCATGGGCATCTCAAGGTCATCATCGGGGTTaGCATTGTAGCGTCCACAGAGGCCATAGGTGCCGTTCTGCATGC +
Preference number: 5 (lower is better)
Translates to: SVQAAPWASQGHHRG*HCSVHRGHRCRSAC
Trigger: GCATGCAGAACGGCACCTATGGCCTCTGTGGACGCTACAATGGCAACCCCGATGATGACCTTGAGATGCCCATGGGGCTGCCTGCACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp CCGCACGGTAGACACACACCCAGTTTGGATTCTCCAGTCTCCGATTaGGATGCCAAGGGCTTGGCACACCAAGGCGTAGGCCTGAATGGC +
Preference number: 5 (lower is better)
Translates to: PHGRHTPSLDSPVSD*DAKGLAHQGVGLNG
Trigger: GCCATTCAGGCCTACGCCTTGGTGTGCCAAGCCCTTGGCATCCCAATCGGAGACTGGAGAATCCAAACTGGGTGTGTGTCTACCGTGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp TTTAGCTTGACTTCCAAAGCCCCGACGCCTCCTATCTTGACCTCTTaGTCAGCCACGAGGATCCGAACACCCCGGAGCCAAGCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: FSLTSKAPTPPILTS*SATRIRTPRSQAGP
Trigger: AGGGCCAGCTTGGCTCCGGGGTGTTCGGATCCTCGTGGCTGACCAAGAGGTCAAGATAGGAGGCGTCGGGGCTTTGGAAGTCAAGCTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGAGCTCGGAGTCATTGTaGCAGGCCTTCAGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: TSSPVTEAGTARWRPQQESSESL*QAFSRS
Trigger: GGACCTGCTGAAGGCCTGCAACAATGACTCCGAGCT...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGAGCAGCTCGGAGTCATaGTTGCAGGCCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: TSSPVTEAGTARWRPQQESSSES*LQAFSR
Trigger: CCTGCTGAAGGCCTGCAACAATGACTCCGAGCTGCT...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGCTGTTGGAGGGGTCGTaGATGATACCACACCGGGAG +
Preference number: 5 (lower is better)
Translates to: TSSPVTEAGTARWRPQQELLEGS*MIPHRE
Trigger: CTCCCGGTGTGGTATCATCAACGACCCCTCCAACAG...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGTCACACTGGATCAGGTaGCGCCTGAAACAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: TSSPVTEAGTARWRPQQESHWIR*RLKQRQ
Trigger: CTGCCGCTGTTTCAGGCGCAACCTGATCCAGTGTGA...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCACGAAGGCGCAGTaGGCAGGGAAGCGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQSTKAQ*AGKRRK
Trigger: CTTCCTGCGCTTCCCTGCCAACTGCGCCTTCGTGCT...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGATCCATCTGGGCTGCCTaGCAGGTCACCTCCGCGTCG +
Preference number: 5 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARSIWAA*QVTSAS
Trigger: CGACGCGGAGGTGACCTGCAAGGCAGCCCAGATGGA...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 90 bp ATTCTTGCAAGCACTGGCATAGCGGGCCACAGAATCACACAGCTCTaGCTCATTGCCTCCGCTCTGGCACAGGCGAAACAGGCAGGTGCG +
Preference number: 5 (lower is better)
Translates to: ILASTGIAGHRITQL*LIASALAQAKQAGA
Trigger: CGCACCTGCCTGTTTCGCCTGTGCCAGAGCGGAGGCAATGAGTCAGAGCTGTGTGATTCTGTGGCCCGCTATGCCAGTGCTTGCAAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 90 bp GATCAAGGAGCCCATAGCAGGGCTGGAAGAAGCCCTTCATGTCGGTaGGTTTCAGGCAGTAGCCGTCACCCTGCATGGCCTGGATGTGCA +
Preference number: 5 (lower is better)
Translates to: DQGAHSRAGRSPSCR*VSGSSRHPAWPGCA
Trigger: TGCACATCCAGGCCATGCAGGGTGACGGCTACTGCCTGAAACTCACCGACATGAAGGGCTTCTTCCAGCCCTGCTATGGGCTCCTTGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp AGGCCTGAATGGCTTGGCAGAGGAGCGTGCCGTTGTCCCTCACACTaGACAGGTCGTACACACAGCTGTGTACAAAAGCCGTGGCATCCA +
Preference number: 5 (lower is better)
Translates to: RPEWLGRGACRCPSH*TGRTHSCVQKPWHP
Trigger: TGGATGCCACGGCTTTTGTACACAGCTGTGTGTACGACCTGTGCAGTGTGAGGGACAACGGCACGCTCCTCTGCCAAGCCATTCAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp GGTGTCTCTCTTCACCCAGCTCTGGCCAAACTCGTTGATACTCAGTaGAGGCAGCCCCATGGGCATCTCAAGGTCATCATCGGGGTTGCC +
Preference number: 5 (lower is better)
Translates to: GVSLHPALAKLVDTQ*RQPHGHLKVIIGVA
Trigger: GGCAACCCCGATGATGACCTTGAGATGCCCATGGGGCTGCCTGCACTGAGTATCAACGAGTTTGGCCAGAGCTGGGTGAAGAGAGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp AGTTCCACTGAAGAATTAGAGGCTCTGCAGCTCCTTCCATCTTCTTaGAGGGATCCGGTCACACAGCTGCACAGAGGCCCGTCGACCCGG +
Preference number: 5 (lower is better)
Translates to: SSTEELEALQLLPSS*RDPVTQLHRGPSTR
Trigger: CCGGGTCGACGGGCCTCTGTGCAGCTGTGTGACCGGATCCCTGCAAGAAGATGGAAGGAGCTGCAGAGCCTCTAATTCTTCAGTGGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp GTGGTAGTGTGGCTCCCCGAATACCACACAGGTACTGGTCTCCACTaGGCTGCAGTAGAAGAACCGACCCTTGGGTTCGCACACCTCGTA +
Preference number: 5 (lower is better)
Translates to: VVVWLPEYHTGTGLH*AAVEEPTLGFAHLV
Trigger: TACGAGGTGTGCGAACCCAAGGGTCGGTTCTTCTACTGCAGCCCAGTGGAGACCAGTACCTGTGTGGTATTCGGGGAGCCACACTACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp GCACAGCTGCTGTACTTTGGAGAAACCTTCCACTTTGGCACAGGATaGGCAGCGGTCCCCACAGCCCACCTGGCAGAAGGTGTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: AQLLYFGETFHFGTG*AAVPTAHLAEGVSL
Trigger: AAGAGAGACACCTTCTGCCAGGTGGGCTGTGGGGACCGCTGCCCATCCTGTGCCAAAGTGGAAGGTTTCTCCAAAGTACAGCAGCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp AGCCAGCATTCTGGTTGGGGATCAGGCTGCACAGCTGCTGTACTTTaGAGAAACCTTCCACTTTGGCACAGGATGGGCAGCGGTCCCCAC +
Preference number: 5 (lower is better)
Translates to: SQHSGWGSGCTAAVL*RNLPLWHRMGSGPH
Trigger: GTGGGGACCGCTGCCCATCCTGTGCCAAAGTGGAAGGTTTCTCCAAAGTACAGCAGCTGTGCAGCCTGATCCCCAACCAGAATGCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp AGTTCCTCCAGCCGGTCACTGCGATTCCTTGAGTCTGGCAAGTGCTaGCATAGTTTTGTAACCAGCTGCAGGCTGTCTGCACGGCACCCC +
Preference number: 5 (lower is better)
Translates to: SSSSRSLRFLESGKC*HSFVTSCRLSARHP
Trigger: GGGGTGCCGTGCAGACAGCCTGCAGCTGGTTACAAAACTATGCCAGCACTTGCCAGACTCAAGGAATCGCAGTGACCGGCTGGAGGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp TGCAGCCACATAATTCTCCTCCGTTGTCCAGCTCGCAGGTCCTGTTaGGACAATCCGCCCCCACACAAGGGTCTTCAACCACTCCTGAGC +
Preference number: 5 (lower is better)
Translates to: CSHIILLRCPARRSC*DNPPPHKGLQPLLS
Trigger: GCTCAGGAGTGGTTGAAGACCCTTGTGTGGGGGCGGATTGTCCCAACAGGACCTGCGAGCTGGACAACGGAGGAGAATTATGTGGCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGATGGGATGCCAAGGGCTaGGCACACCAAGGCGTAGGC +
Preference number: 5 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARWDAKG*AHQGVG
Trigger: GCCTACGCCTTGGTGTGCCAAGCCCTTGGCATCCCA...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGCACTGCACTGTACAATaGGCGGTGGCCCAGAAGAAC +
Preference number: 5 (lower is better)
Translates to: RWCPPDLTAGGRWRECERHCTVQ*AVAQKN
Trigger: GTTCTTCTGGGCCACCGCCAATTGTACAGTGCAGTG...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGTCCTATCTTGACCTCTaGGTCAGCCACGAGGATCCG +
Preference number: 5 (lower is better)
Translates to: TSSPVTEAGTARWRPQQESYLDL*VSHEDP
Trigger: CGGATCCTCGTGGCTGACCAAGAGGTCAAGATAGGA...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGTCCTATCTTGACCTCTaGGTCAGCCACGAGGATCCG +
Preference number: 5 (lower is better)
Translates to: RWCPPDLTAGGRWRECERSYLDL*VSHEDP
Trigger: CGGATCCTCGTGGCTGACCAAGAGGTCAAGATAGGA...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCCGACGCCTCCTATCTaGACCTCTTGGTCAGCCACG +
Preference number: 5 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHPTPPI*TSWSAT
Trigger: CGTGGCTGACCAAGAGGTCAAGATAGGAGGCGTCGG...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GTAAAATGTGAAGGGCTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCACGGACACCACACCCTaGGACTCCACAGTTGTGCTG +
Preference number: 5 (lower is better)
Translates to: VKCEGLGLRIGTGRVRFSTDTTP*DSTVVL
Trigger: CAGCACAACTGTGGAGTCCAAGGGTGTGGTGTCCGT...GGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAGCCCTTCACATTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS-3UTR CAA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCAGCTCGGAGTCATTGTaGCAGGCCTTCAGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNISSESL*QAFSRS
Trigger: GGACCTGCTGAAGGCCTGCAACAATGACTCCGAGCT...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGCTGTTGGAGGGGTCGTaGATGATACCACACCGGGAG +
Preference number: 5 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLLLEGS*MIPHRE
Trigger: CTCCCGGTGTGGTATCATCAACGACCCCTCCAACAG...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGCTCTTCTGCATGCCATaGGTCTTCCAGCTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLLFCMP*VFQLWA
Trigger: GGCCCAGAGCTGGAAGACCAATGGCATGCAGAAGAG...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCCTCTTCTGCATGCCATaGGTCTTCCAGCTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNILFCMP*VFQLWA
Trigger: GGCCCAGAGCTGGAAGACCAATGGCATGCAGAAGAG...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGGAGAACTGTAGCTCGTaGCAGCTGGGGGCGAGAGGT +
Preference number: 5 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQENCSS*QLGARG
Trigger: ACCTCTCGCCCCCAGCTGCAACGAGCTACAGTTCTC...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS-3UTR CAA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATTGCTCACAGCCGCCGTaGTCTTCACACCAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHCSQPP*SSHQSS
Trigger: GCTGGACTGGTGTGAAGACAACGGCGGCTGTGAGCA...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 90 bp CTGAGTAGCAGCCACAGTTGTGGGGCAAGATGCAGCTCTTGCCATTaGGGACGTAGCCTGCATCACACTGGCAGCCCTCTACGCAGTAGT +
Preference number: 5 (lower is better)
Translates to: LSSSHSCGARCSSCH*GRSLHHTGSPLRSS
Trigger: ACTACTGCGTAGAGGGCTGCCAGTGTGATGCAGGCTACGTCCTCAATGGCAAGAGCTGCATCTTGCCCCACAACTGTGGCTGCTACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 90 bp GATGATGAGCTGGAAGGAGATGTCTGGCAATTTCTGGCAGATGGTTaGGAGCACGAAGGCGCAGTTGGCAGGGAAGCGCAGGAAGGCACC +
Preference number: 5 (lower is better)
Translates to: DDELEGDVWQFLADG*EHEGAVGREAQEGT
Trigger: GGTGCCTTCCTGCGCTTCCCTGCCAACTGCGCCTTCGTGCTCTCAACCATCTGCCAGAAATTGCCAGACATCTCCTTCCAGCTCATCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp AACCTTCATCACACTGGCATCCCTCAGAGCAGCTGTCCACACAGATaGGGCCCAAGGCCAGGGTCTCGCAGGTCTCTGTACATGTCATAC +
Preference number: 5 (lower is better)
Translates to: NLHHTGIPQSSCPHR*GPRPGSRRSLYMSY
Trigger: GTATGACATGTACAGAGACCTGCGAGACCCTGGCCTTGGGCCCCATCTGTGTGGACAGCTGCTCTGAGGGATGCCAGTGTGATGAAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp AGCAGAAGATCTGGCAGTCCTGGTCTACCCAGAAGGTCTCATTGGTaGCAAGTTGATGCCCCTCAAAGTTGCAGCCGCACTCGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: SRRSGSPGLPRRSHW*QVDAPQSCSRTRSE
Trigger: CTCGGAGCGAGTGCGGCTGCAACTTTGAGGGGCATCAACTTGCCACCAATGAGACCTTCTGGGTAGACCAGGACTGCCAGATCTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp AGTAGCCGTCACCCTGCATGGCCTGGATGTGCACATTGTCACATGTaGCTGCATACTGTGAGAACTGTAGCTCGTTGCAGCTGGGGGCGA +
Preference number: 5 (lower is better)
Translates to: SSRHPAWPGCAHCHM*LHTVRTVARCSWGR
Trigger: TCGCCCCCAGCTGCAACGAGCTACAGTTCTCACAGTATGCAGCCACATGTGACAATGTGCACATCCAGGCCATGCAGGGTGACGGCTACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS-3UTR CAA 90 bp GTAAAATGTGAAGGGCTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCCTAGAGGTGCAGCCATaGGCCGGGTCAATTTCCTTC +
Preference number: 5 (lower is better)
Translates to: VKCEGLGLRIGTGRVRFSLEVQP*AGSISF
Trigger: GAAGGAAATTGACCCGGCCAATGGCTGCACCTCTAG...GGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAGCCCTTCACATTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS-3UTR CAA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGCTAGAGGTGCAGCCATaGGCCGGGTCAATTTCCTTC +
Preference number: 5 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLLEVQP*AGSISF
Trigger: GAAGGAAATTGACCCGGCCAATGGCTGCACCTCTAG...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATTTCTCCAGTCTCCGATaGGGATGCCAAGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHFSSLR*GCQGLG
Trigger: GCCAAGCCCTTGGCATCCCAATCGGAGACTGGAGAA...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGTCACTGGCATTGGCATaGAAGAAGCCACACAGGCCT +
Preference number: 5 (lower is better)
Translates to: RWCPPDLTAGGRWRECERSLALA*KKPHRP
Trigger: AGGCCTGTGTGGCTTCTTCAATGCCAATGCCAGTGA...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCAGCTCGGAGTCATaGTTGCAGGCCTTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQSSSES*LQAFSR
Trigger: CCTGCTGAAGGCCTGCAACAATGACTCCGAGCTGCT...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGACACAGCTCTGACTCATaGCCTCCGCTCTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARHSSDS*PPLWHR
Trigger: CCTGTGCCAGAGCGGAGGCAATGAGTCAGAGCTGTG...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCCTCTGGCCAAACTCGTaGATACTCAGTGCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNILWPNS*ILSAGS
Trigger: GCTGCCTGCACTGAGTATCAACGAGTTTGGCCAGAG...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGTCACACTGGATCAGGTaGCGCCTGAAACAGCGGCAG +
Preference number: 5 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQSHWIR*RLKQRQ
Trigger: CTGCCGCTGTTTCAGGCGCAACCTGATCCAGTGTGA...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGTTGGGCGAGGACCACTaGTCGAAGTTGATGATGAGC +
Preference number: 5 (lower is better)
Translates to: TSSPVTEAGTARWRPQQELGEDH*SKLMMS
Trigger: GCTCATCATCAACTTCGACAAGTGGTCCTCGCCCAA...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGCAGAGCCCACACACTTaGTTCTGTAGCCTCTCACTG +
Preference number: 5 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEQSPHT*FCSLSL
Trigger: CAGTGAGAGGCTACAGAACAAAGTGTGTGGGCTCTG...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCAGCTCGCAGGTCCTGTaGGGACAATCCGCCCCCACA +
Preference number: 5 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPSSQVL*GQSAPT
Trigger: TGTGGGGGCGGATTGTCCCAACAGGACCTGCGAGCT...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGATGCTCACAGCCGCCGTaGTCTTCACACCAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARCSQPP*SSHQSS
Trigger: GCTGGACTGGTGTGAAGACAACGGCGGCTGTGAGCA...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCGCTCCTTCCATCTTCTaGCAGGGATCCGGTCACACA +
Preference number: 5 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIAPSIF*QGSGHT
Trigger: TGTGTGACCGGATCCCTGCAAGAAGATGGAAGGAGC...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 90 bp CCTGGCAGAAGGTGTCTCTCTTCACCCAGCTCTGGCCAAACTCGTTaGTACTCAGTGCAGGCAGCCCCATGGGCATCTCAAGGTCATCAT +
Preference number: 5 (lower is better)
Translates to: PGRRCLSSPSSGQTR*YSVQAAPWASQGHH
Trigger: ATGATGACCTTGAGATGCCCATGGGGCTGCCTGCACTGAGTATCAACGAGTTTGGCCAGAGCTGGGTGAAGAGAGACACCTTCTGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp TGTAGTTCCTCCAGCCGGTCACTGCGATTCCTTGAGTCTGGCAAGTaGTGGCATAGTTTTGTAACCAGCTGCAGGCTGTCTGCACGGCAC +
Preference number: 5 (lower is better)
Translates to: CSSSSRSLRFLESGK*WHSFVTSCRLSARH
Trigger: GTGCCGTGCAGACAGCCTGCAGCTGGTTACAAAACTATGCCAGCACTTGCCAGACTCAAGGAATCGCAGTGACCGGCTGGAGGAACTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp AGTAGCAGAAGATCTGGCAGTCCTGGTCTACCCAGAAGGTCTCATTaGTGGCAAGTTGATGCCCCTCAAAGTTGCAGCCGCACTCGCTCC +
Preference number: 5 (lower is better)
Translates to: SSRRSGSPGLPRRSH*WQVDAPQSCSRTRS
Trigger: GGAGCGAGTGCGGCTGCAACTTTGAGGGGCATCAACTTGCCACCAATGAGACCTTCTGGGTAGACCAGGACTGCCAGATCTTCTGCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCTTCTCCAGTCTCCGATaGGGATGCCAAGGGCTTGGC +
Preference number: 5 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLFSSLR*GCQGLG
Trigger: GCCAAGCCCTTGGCATCCCAATCGGAGACTGGAGAA...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCACTGCACTGTACAATaGGCGGTGGCCCAGAAGAAC +
Preference number: 5 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHHCTVQ*AVAQKN
Trigger: GTTCTTCTGGGCCACCGCCAATTGTACAGTGCAGTG...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGCGCTCAGGGCAGGTCTaGAGTAGGGTATATGATAAC +
Preference number: 5 (lower is better)
Translates to: RWCPPDLTAGGRWRECERRSGQV*SRVYDN
Trigger: GTTATCATATACCCTACTCAAGACCTGCCCTGAGCG...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCCCGACGCCTCCTATCTaGACCTCTTGGTCAGCCACG +
Preference number: 5 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPPTPPI*TSWSAT
Trigger: CGTGGCTGACCAAGAGGTCAAGATAGGAGGCGTCGG...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAACGGACACCACACCCTaGGACTCCACAGTTGTGCTG +
Preference number: 5 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARTDTTP*DSTVVL
Trigger: CAGCACAACTGTGGAGTCCAAGGGTGTGGTGTCCGT...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGAGAAACCTTCCACTTaGGCACAGGATGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: AGQTNFSGQLSHQTSVAREKPST*AQDGQR
Trigger: CCGCTGCCCATCCTGTGCCAAAGTGGAAGGTTTCTC...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGGACCACTTGTCGAAGTaGATGATGAGCTGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: RWCPPDLTAGGRWRECERDHLSK*MMSWKE
Trigger: CTCCTTCCAGCTCATCATCAACTTCGACAAGTGGTC...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGTTGGGCGAGGACCACTaGTCGAAGTTGATGATGAGC +
Preference number: 5 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLLGEDH*SKLMMS
Trigger: GCTCATCATCAACTTCGACAAGTGGTCCTCGCCCAA...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCCAGAGCCCACACACTTaGTTCTGTAGCCTCTCACTG +
Preference number: 5 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIQSPHT*FCSLSL
Trigger: CAGTGAGAGGCTACAGAACAAAGTGTGTGGGCTCTG...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGGCCTGGATGTGCACATaGTCACATGTGGCTGCATAC +
Preference number: 5 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLAWMCT*SHVAAY
Trigger: GTATGCAGCCACATGTGACAATGTGCACATCCAGGC...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGCCCAGCTGGAAGAGCTaGCACTTAGATATGGACACT +
Preference number: 5 (lower is better)
Translates to: RWCPPDLTAGGRWRECERPSWKS*HLDMDT
Trigger: AGTGTCCATATCTAAGTGCAAGCTCTTCCAGCTGGG...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGGTCGGAACTGTCAGGTaGATGACACTTAGCATAGGC +
Preference number: 5 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEVGTVR*MTLSIG
Trigger: GCCTATGCTAAGTGTCATCAACCTGACAGTTCCGAC...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp TTGGTCAGCCACGAGGATCCGAACACCCCGGAGCCAAGCTGGCCCTaGATCAGGCTTCTTCTTGTTGATGTCAATTTCCAAGTACTCAGG +
Preference number: 5 (lower is better)
Translates to: LVSHEDPNTPEPSWP*IRLLLVDVNFQVLR
Trigger: CCTGAGTACTTGGAAATTGACATCAACAAGAAGAAGCCTGATGCAGGGCCAGCTTGGCTCCGGGGTGTTCGGATCCTCGTGGCTGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp CGGAGTCATTGTTGCAGGCCTTCAGCAGGTCCCCACACTCGCCATTaGAGATTTCCTCAAATGTTGTCCAGCTCTCCAAGAACACCGCCA +
Preference number: 5 (lower is better)
Translates to: RSHCCRPSAGPHTRH*RFPQMLSSSPRTPP
Trigger: TGGCGGTGTTCTTGGAGAGCTGGACAACATTTGAGGAAATCTGCAATGGCGAGTGTGGGGACCTGCTGAAGGCCTGCAACAATGACTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp CCCTGCAGGGAATGGTCTCACAGTGGACACTGTTGTCTGTGCCATTaGAGTAGCAGAAGATCTGGCAGTCCTGGTCTACCCAGAAGGTCT +
Preference number: 5 (lower is better)
Translates to: PCREWSHSGHCCLCH*SSRRSGSPGLPRRS
Trigger: AGACCTTCTGGGTAGACCAGGACTGCCAGATCTTCTGCTACTGCAATGGCACAGACAACAGTGTCCACTGTGAGACCATTCCCTGCAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp CATCGTCCCTGCAGGGAATGGTCTCACAGTGGACACTGTTGTCTGTaGCATTGCAGTAGCAGAAGATCTGGCAGTCCTGGTCTACCCAGA +
Preference number: 5 (lower is better)
Translates to: HRPCREWSHSGHCCL*HCSSRRSGSPGLPR
Trigger: TCTGGGTAGACCAGGACTGCCAGATCTTCTGCTACTGCAATGGCACAGACAACAGTGTCCACTGTGAGACCATTCCCTGCAGGGACGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp GCACATTGTCACATGTGGCTGCATACTGTGAGAACTGTAGCTCGTTaGAGCTGGGGGCGAGAGGTCTCTTCTGCATGCCATTGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: AHCHMWLHTVRTVAR*SWGREVSSACHWSS
Trigger: GGAAGACCAATGGCATGCAGAAGAGACCTCTCGCCCCCAGCTGCAACGAGCTACAGTTCTCACAGTATGCAGCCACATGTGACAATGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS CCA 90 bp GTAATAGATCTCACCCCGAATTCCATTGTGCACATCTGCCCAGAATaGAGCAATGAAGGCCCTCCCGTCCGTCAGGGGAAAGGACTCTGG +
Preference number: 5 (lower is better)
Translates to: VIDLTPNSIVHICPE*SNEGPPVRQGKGLW
Trigger: CCAGAGTCCTTTCCCCTGACGGACGGGAGGGCCTTCATTGCTCCATTCTGGGCAGATGTGCACAATGGAATTCGGGGTGAGATCTATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp GGTGTCCGGACAGCTACTGGTACATACAGAGTAATGGCTGAAGCTTaGGCACCGCACGGTAGACACACACCCAGTTTGGATTCTCCAGTC +
Preference number: 5 (lower is better)
Translates to: GVRTATGTYRVMAEA*APHGRHTPSLDSPV
Trigger: GACTGGAGAATCCAAACTGGGTGTGTGTCTACCGTGCGGTGCCCAAGCTTCAGCCATTACTCTGTATGTACCAGTAGCTGTCCGGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp AGCACTGCACTGTACAATTGGCGGTGGCCCAGAAGAACTCGCCCATaGTATAGTAGTGGCCATCGAAGTCACAGCCGCACTTGTGCAAAG +
Preference number: 5 (lower is better)
Translates to: STALYNWRWPRRTRP*YSSGHRSHSRTCAK
Trigger: CTTTGCACAAGTGCGGCTGTGACTTCGATGGCCACTACTATACCATGGGCGAGTTCTTCTGGGCCACCGCCAATTGTACAGTGCAGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp CATCCCCTCCCTCTTCGCATAAGCACTGCACTGTACAATTGGCGGTaGCCCAGAAGAACTCGCCCATGGTATAGTAGTGGCCATCGAAGT +
Preference number: 5 (lower is better)
Translates to: HPLPLRISTALYNWR*PRRTRPWYSSGHRS
Trigger: ACTTCGATGGCCACTACTATACCATGGGCGAGTTCTTCTGGGCCACCGCCAATTGTACAGTGCAGTGCTTATGCGAAGAGGGAGGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp GACCTCTTGGTCAGCCACGAGGATCCGAACACCCCGGAGCCAAGCTaGCCCTGCATCAGGCTTCTTCTTGTTGATGTCAATTTCCAAGTA +
Preference number: 5 (lower is better)
Translates to: DLLVSHEDPNTPEPS*PCIRLLLVDVNFQV
Trigger: TACTTGGAAATTGACATCAACAAGAAGAAGCCTGATGCAGGGCCAGCTTGGCTCCGGGGTGTTCGGATCCTCGTGGCTGACCAAGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp AAGCCCAGCTGGAAGAGCTTGCACTTAGATATGGACACTTCCATCTaGGCTGCCTTGCAGGTCACCTCCGCGTCGATGATGTCATGGGAA +
Preference number: 5 (lower is better)
Translates to: KPSWKSLHLDMDTSI*AALQVTSASMMSWE
Trigger: TTCCCATGACATCATCGACGCGGAGGTGACCTGCAAGGCAGCCCAGATGGAAGTGTCCATATCTAAGTGCAAGCTCTTCCAGCTGGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGTGGCTCACTAGCACGTaGAAGGAAACAACACCATTG +
Preference number: 5 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEWLTST*KETTPL
Trigger: CAATGGTGTTGTTTCCTTCAACGTGCTAGTGAGCCA...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGTCCAGACAGCGACACTaGATGGTACAGTTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLSRQRH*MVQFRS
Trigger: TGACCTGAACTGTACCATCAAGTGTCGCTGTCTGGA...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGTAAGCACACGAGCCTaGGAAGTGGAAGAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARVSTRA*EVEEEA
Trigger: GGCTTCCTCTTCCACTTCCAAGGCTCGTGTGCTTAC...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCCGCTCAGGGCAGGTCTaGAGTAGGGTATATGATAAC +
Preference number: 5 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIRSGQV*SRVYDN
Trigger: GTTATCATATACCCTACTCAAGACCTGCCCTGAGCG...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GTAAAATGTGAAGGGCTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCCTCATTGGTGGCAAGTaGATGCCCCTCAAAGTTGCA +
Preference number: 5 (lower is better)
Translates to: VKCEGLGLRIGTGRVRFSLIGGK*MPLKVA
Trigger: TGCAACTTTGAGGGGCATCAACTTGCCACCAATGAG...GGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAGCCCTTCACATTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS-3UTR CAA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGACTCTGGCCAAACTCGTaGATACTCAGTGCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARLWPNS*ILSAGS
Trigger: GCTGCCTGCACTGAGTATCAACGAGTTTGGCCAGAG...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATATTTCTGGCAGATGGTaGAGAGCACGAAGGCGCAGT +
Preference number: 5 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHISGRW*RARRRS
Trigger: ACTGCGCCTTCGTGCTCTCAACCATCTGCCAGAAAT...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GTAAAATGTGAAGGGCTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCGACCACTTGTCGAAGTaGATGATGAGCTGGAAGGAG +
Preference number: 5 (lower is better)
Translates to: VKCEGLGLRIGTGRVRFSDHLSK*MMSWKE
Trigger: CTCCTTCCAGCTCATCATCAACTTCGACAAGTGGTC...GGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAGCCCTTCACATTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS-3UTR CAA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCTGTGTGCCATTCACCTaGACAGTGTTCCGATCGTTG +
Preference number: 5 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNICVPFT*TVFRSL
Trigger: CAACGATCGGAACACTGTCAAGGTGAATGGCACACA...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGGCCTGGATGTGCACATaGTCACATGTGGCTGCATAC +
Preference number: 5 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQAWMCT*SHVAAY
Trigger: GTATGCAGCCACATGTGACAATGTGCACATCCAGGC...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCCATGAAAATTCCACATaGATCGTGCGGTCCCTCGTG +
Preference number: 5 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIHENST*IVRSLV
Trigger: CACGAGGGACCGCACGATCAATGTGGAATTTTCATG...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCGTCGGAACTGTCAGGTaGATGACACTTAGCATAGGC +
Preference number: 5 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIVGTVR*MTLSIG
Trigger: GCCTATGCTAAGTGTCATCAACCTGACAGTTCCGAC...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp CATCGGAGTACTGGACGGACACCACACCCTTGGACTCCACAGTTGTaGTGTTCTTGTTTCTGTGAATCTCCAACCTCCCCGAAGGATGGA +
Preference number: 5 (lower is better)
Translates to: HRSTGRTPHPWTPQL*CSCFCESPTSPKDG
Trigger: TCCATCCTTCGGGGAGGTTGGAGATTCACAGAAACAAGAACAGCACAACTGTGGAGTCCAAGGGTGTGGTGTCCGTCCAGTACTCCGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp CATTTGGCAAAGCCAGCATTCTGGTTGGGGATCAGGCTGCACAGCTaGTGTACTTTGGAGAAACCTTCCACTTTGGCACAGGATGGGCAG +
Preference number: 5 (lower is better)
Translates to: HLAKPAFWLGIRLHS*CTLEKPSTLAQDGQ
Trigger: CTGCCCATCCTGTGCCAAAGTGGAAGGTTTCTCCAAAGTACAGCAGCTGTGCAGCCTGATCCCCAACCAGAATGCTGGCTTTGCCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp AGTAGACATCCCCTCCCTCTTCGCATAAGCACTGCACTGTACAATTaGCGGTGGCCCAGAAGAACTCGCCCATGGTATAGTAGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: SRHPLPLRISTALYN*RWPRRTRPWYSSGH
Trigger: ATGGCCACTACTATACCATGGGCGAGTTCTTCTGGGCCACCGCCAATTGTACAGTGCAGTGCTTATGCGAAGAGGGAGGGGATGTCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp TACATGGTGGACAGTCGGATGTACAGTAGTCCCACATCGGAGTACTaGACGGACACCACACCCTTGGACTCCACAGTTGTGCTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: YMVDSRMYSSPTSEY*TDTTPLDSTVVLFL
Trigger: CAAGAACAGCACAACTGTGGAGTCCAAGGGTGTGGTGTCCGTCCAGTACTCCGATGTGGGACTACTGTACATCCGACTGTCCACCATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp TTGTCGAAGTTGATGATGAGCTGGAAGGAGATGTCTGGCAATTTCTaGCAGATGGTTGAGAGCACGAAGGCGCAGTTGGCAGGGAAGCGC +
Preference number: 5 (lower is better)
Translates to: LSKLMMSWKEMSGNF*QMVESTKAQLAGKR
Trigger: GCGCTTCCCTGCCAACTGCGCCTTCGTGCTCTCAACCATCTGCCAGAAATTGCCAGACATCTCCTTCCAGCTCATCATCAACTTCGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp CACTGCCGGTCATTGATTCTCACACCCTCTCTCTCAAAGCCCAGCTaGAAGAGCTTGCACTTAGATATGGACACTTCCATCTGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: HCRSLILTPSLSKPS*KSLHLDMDTSIWAA
Trigger: GGCAGCCCAGATGGAAGTGTCCATATCTAAGTGCAAGCTCTTCCAGCTGGGCTTTGAGAGAGAGGGTGTGAGAATCAATGACCGGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp AGTAGCCGTCACCCTGCATGGCCTGGATGTGCACATTGTCACATGTaGCTGCATACTGTGAGAACTGTAGCTCGTTGCAGCTCTTCTGCA +
Preference number: 5 (lower is better)
Translates to: SSRHPAWPGCAHCHM*LHTVRTVARCSSSA
Trigger: TGCAGAAGAGCTGCAACGAGCTACAGTTCTCACAGTATGCAGCCACATGTGACAATGTGCACATCCAGGCCATGCAGGGTGACGGCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCTGGCTCACTAGCACGTaGAAGGAAACAACACCATTG +
Preference number: 5 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIWLTST*KETTPL
Trigger: CAATGGTGTTGTTTCCTTCAACGTGCTAGTGAGCCA...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGAAGGTGGTCATGTCTTaGAAGTACTTCCTGATGTCC +
Preference number: 5 (lower is better)
Translates to: RWCPPDLTAGGRWRECERKVVMS*KYFLMS
Trigger: GGACATCAGGAAGTACTTCAAAGACATGACCACCTT...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGTCCAGACAGCGACACTaGATGGTACAGTTCAGGTCA +
Preference number: 5 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQSRQRH*MVQFRS
Trigger: TGACCTGAACTGTACCATCAAGTGTCGCTGTCTGGA...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCGTAAGCACACGAGCCTaGGAAGTGGAAGAGGAAGCC +
Preference number: 5 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPVSTRA*EVEEEA
Trigger: GGCTTCCTCTTCCACTTCCAAGGCTCGTGTGCTTAC...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCTCACTGGCATTGGCATaGAAGAAGCCACACAGGCCT +
Preference number: 5 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLSLALA*KKPHRP
Trigger: AGGCCTGTGTGGCTTCTTCAATGCCAATGCCAGTGA...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGTCCCCACACTCGCCATaGCAGATTTCCTCAAATGTT +
Preference number: 5 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLSPHSP*QISSNV
Trigger: AACATTTGAGGAAATCTGCAATGGCGAGTGTGGGGA...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCATTTCTGGCAGATGGTaGAGAGCACGAAGGCGCAGT +
Preference number: 5 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLISGRW*RARRRS
Trigger: ACTGCGCCTTCGTGCTCTCAACCATCTGCCAGAAAT...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGTCAGTCATGTCTCCATaGAAGTTCCCACAGAGCCCA +
Preference number: 5 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQSVMSP*KFPQSP
Trigger: TGGGCTCTGTGGGAACTTCAATGGAGACATGACTGA...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCCCAGCTGGAAGAGCTaGCACTTAGATATGGACACT +
Preference number: 5 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHPSWKS*HLDMDT
Trigger: AGTGTCCATATCTAAGTGCAAGCTCTTCCAGCTGGG...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGATGATGTTGCCAGTGTaGTTGGCACTTTCAATCCAG +
Preference number: 5 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEMMLPV*LALSIQ
Trigger: CTGGATTGAAAGTGCCAACAACACTGGCAACATCAT...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCGCTCCTTCCATCTTCTaGCAGGGATCCGGTCACACA +
Preference number: 5 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPAPSIF*QGSGHT
Trigger: TGTGTGACCGGATCCCTGCAAGAAGATGGAAGGAGC...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp GAGGAAGCCGCAGTAGTCAGAACCAAAGTAGAGGGCCTCAGTGGCTaGATCACACTGAGTACAATTGTCTACACAGCCAGAGCCACACTT +
Preference number: 5 (lower is better)
Translates to: EEAAVVRTKVEGLSG*ITLSTIVYTARATL
Trigger: AAGTGTGGCTCTGGCTGTGTAGACAATTGTACTCAGTGTGATGCAGCCACTGAGGCCCTCTACTTTGGTTCTGACTACTGCGGCTTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp TGCTGTGACATTTGGCAAAGCCAGCATTCTGGTTGGGGATCAGGCTaGACAGCTGCTGTACTTTGGAGAAACCTTCCACTTTGGCACAGG +
Preference number: 5 (lower is better)
Translates to: CCDIWQSQHSGWGSG*TAAVLWRNLPLWHR
Trigger: CCTGTGCCAAAGTGGAAGGTTTCTCCAAAGTACAGCAGCTGTGCAGCCTGATCCCCAACCAGAATGCTGGCTTTGCCAAATGTCACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp CAGCTGGAAGAGCTTGCACTTAGATATGGACACTTCCATCTGGGCTaGCTTGCAGGTCACCTCCGCGTCGATGATGTCATGGGAATTGTT +
Preference number: 5 (lower is better)
Translates to: QLEELALRYGHFHLG*LAGHLRVDDVMGIV
Trigger: AACAATTCCCATGACATCATCGACGCGGAGGTGACCTGCAAGGCAGCCCAGATGGAAGTGTCCATATCTAAGTGCAAGCTCTTCCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp TTCCCCTTGGCGGTAAGGGTGTTTGTAGGAAGCATTTTTATAGAGTaGCATCTTGGTGGTGAAGCTGCCCTCCTGGGTCGGAACTGTCAG +
Preference number: 5 (lower is better)
Translates to: FPLAVRVFVGSIFIE*HLGGEAALLGRNCQ
Trigger: CTGACAGTTCCGACCCAGGAGGGCAGCTTCACCACCAAGATGGCACTCTATAAAAATGCTTCCTACAAACACCCTTACCGCCAAGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp GCTTCCGTCATCTACTTTAGGGGTTCTCGTGTCATTCTGCCAAAATaGATACATGAGCTCCCTGGGCTGAGCTTGGTGCCGAACAAGAGC +
Preference number: 5 (lower is better)
Translates to: ASVIYFRGSRVILPK*IHELPGLSLVPNKS
Trigger: GCTCTTGTTCGGCACCAAGCTCAGCCCAGGGAGCTCATGTATCCATTTTGGCAGAATGACACGAGAACCCCTAAAGTAGATGACGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGGCATCAGGCTTCTTCTaGTTGATGTCAATTTCCAAG +
Preference number: 5 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEASGFF*LMSISK
Trigger: CTTGGAAATTGACATCAACAAGAAGAAGCCTGATGC...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGCCTTGGACTCCACAGTaGTGCTGTTCTTGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQPWTPQ*CCSCFC
Trigger: ACAGAAACAAGAACAGCACAACTGTGGAGTCCAAGG...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCCTTGGACTCCACAGTaGTGCTGTTCTTGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHPWTPQ*CCSCFC
Trigger: ACAGAAACAAGAACAGCACAACTGTGGAGTCCAAGG...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGGTTGTCTGTGCATTaGCCATTAGGAAGGCAGAAC +
Preference number: 5 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQRLSVH*PLGRQN
Trigger: GTTCTGCCTTCCTAATGGCAAATGCACAGACAACCT...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCCTCATTGGTGGCAAGTaGATGCCCCTCAAAGTTGCA +
Preference number: 5 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLLIGGK*MPLKVA
Trigger: TGCAACTTTGAGGGGCATCAACTTGCCACCAATGAG...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGGCTGTTACAATGAACTaGGGGAAAGAGTCTGAGATT +
Preference number: 5 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEAVTMN*GKESEI
Trigger: AATCTCAGACTCTTTCCCCAAGTTCATTGTAACAGC...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGATGTGTGCCATTCACCTaGACAGTGTTCCGATCGTTG +
Preference number: 5 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARCVPFT*TVFRSL
Trigger: CAACGATCGGAACACTGTCAAGGTGAATGGCACACA...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCTCAGTCATGTCTCCATaGAAGTTCCCACAGAGCCCA +
Preference number: 5 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLSVMSP*KFPQSP
Trigger: TGGGCTCTGTGGGAACTTCAATGGAGACATGACTGA...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGATGTTGCCAGTGTTGTaGGCACTTTCAATCCAGATT +
Preference number: 5 (lower is better)
Translates to: TSSPVTEAGTARWRPQQEMLPVL*ALSIQI
Trigger: AATCTGGATTGAAAGTGCCAACAACACTGGCAACAT...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGACATGAAAATTCCACATaGATCGTGCGGTCCCTCGTG +
Preference number: 5 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARHENST*IVRSLV
Trigger: CACGAGGGACCGCACGATCAATGTGGAATTTTCATG...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGGTTCTTTGTGCTCTTTaGAATAATCTGTGGCGATCC +
Preference number: 5 (lower is better)
Translates to: RWCPPDLTAGGRWRECERVLCAL*NNLWRS
Trigger: GGATCGCCACAGATTATTCAAAAGAGCACAAAGAAC...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 90 bp ACAAGGCTAGAGATGGGTCCCGGTCCTCATTCTTGGCTGTTACAATaGACTTGGGGAAAGAGTCTGAGATTGGTCTGCTTCCTGTGGTGC +
Preference number: 5 (lower is better)
Translates to: TRLEMGPGPHSWLLQ*TWGKSLRLVCFLWC
Trigger: GCACCACAGGAAGCAGACCAATCTCAGACTCTTTCCCCAAGTTCATTGTAACAGCCAAGAATGAGGACCGGGACCCATCTCTAGCCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp GGCAGTAGTACAAGCCACTCTCTTCCATACAGTATTCATCGTCCCTaGAGGGAATGGTCTCACAGTGGACACTGTTGTCTGTGCCATTGC +
Preference number: 5 (lower is better)
Translates to: GSSTSHSLPYSIHRP*REWSHSGHCCLCHC
Trigger: GCAATGGCACAGACAACAGTGTCCACTGTGAGACCATTCCCTGCAGGGACGATGAATACTGTATGGAAGAGAGTGGCTTGTACTACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp TGTACAGTAGTCCCACATCGGAGTACTGGACGGACACCACACCCTTaGACTCCACAGTTGTGCTGTTCTTGTTTCTGTGAATCTCCAACC +
Preference number: 5 (lower is better)
Translates to: CTVVPHRSTGRTPHP*TPQLCCSCFCESPT
Trigger: GGTTGGAGATTCACAGAAACAAGAACAGCACAACTGTGGAGTCCAAGGGTGTGGTGTCCGTCCAGTACTCCGATGTGGGACTACTGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAAGGTGGTCATGTCTTaGAAGTACTTCCTGATGTCC +
Preference number: 5 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQKVVMS*KYFLMS
Trigger: GGACATCAGGAAGTACTTCAAAGACATGACCACCTT...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CTGGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCGCTGTTACAATGAACTaGGGGAAAGAGTCTGAGATT +
Preference number: 5 (lower is better)
Translates to: LGLRIGTGRVRFSRSTNIAVTMN*GKESEI
Trigger: AATCTCAGACTCTTTCCCCAAGTTCATTGTAACAGC...GATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGATCCCGGTCCTCATTCTaGGCTGTTACAATGAACTTG +
Preference number: 5 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARSRSSF*AVTMNL
Trigger: CAAGTTCATTGTAACAGCCAAGAATGAGGACCGGGA...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp TTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATCTCACAGTGTTCCGATCGTaGATGAGAATCTGCTCTTCG +
Preference number: 5 (lower is better)
Translates to: FEDRDGQGEVLQVYKHHLTVFRS*MRICSS
Trigger: CGAAGAGCAGATTCTCATCAACGATCGGAACACTGT...GAGATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CGCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGATGATGTTGCCAGTGTaGTTGGCACTTTCAATCCAG +
Preference number: 5 (lower is better)
Translates to: RGTDQLFWPAFPSDFCSQMMLPV*LALSIQ
Trigger: CTGGATTGAAAGTGCCAACAACACTGGCAACATCAT...CTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp ACATCATCTCCAGTGACTGAAGCTGGCACGGCAAGGTGGAGGCCACAGCAGGAGTGTGGGCAATTAATCTaGCAAGAGTATTTCTCTGAG +
Preference number: 5 (lower is better)
Translates to: TSSPVTEAGTARWRPQQECGQLI*QEYFSE
Trigger: CTCAGAGAAATACTCTTGCAAGATTAATTGCCCACA...CTCCTGCTGTGGCCTCCACCTTGCCGTGCCAGCTTCAGTCACTGGAGATGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp CGTTGGTGTCCTCCAGATCTGACTGCTGGAGGAAGGTGGCGTGAGTGTGAGAGGTGTGGGCAATTAATCTaGCAAGAGTATTTCTCTGAG +
Preference number: 5 (lower is better)
Translates to: RWCPPDLTAGGRWRECERCGQLI*QEYFSE
Trigger: CTCAGAGAAATACTCTTGCAAGATTAATTGCCCACA...CCTCTCACACTCACGCCACCTTCCTCCAGCAGTCAGATCTGGAGGACACCAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 90 bp GAAGTCAAATGGGTAGCCATCAAAGGTGAGGTAGTGACCATAGCCTaGGACGATACAGGAAGCATCAGTACGGGGCTGGCAGTAGTACAA +
Preference number: 5 (lower is better)
Translates to: EVKWVAIKGEVVTIA*DDTGSISTGLAVVQ
Trigger: TTGTACTACTGCCAGCCCCGTACTGATGCTTCCTGTATCGTCTCAGGCTATGGTCACTACCTCACCTTTGATGGCTACCCATTTGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp ATGAAGGCCCTCCCGTCCGTCAGGGGAAAGGACTCTGGTGTAAACTaGCTCACTAGCACGTTGAAGGAAACAACACCATTGTTATTGACA +
Preference number: 5 (lower is better)
Translates to: MKALPSVRGKDSGVN*LTSTLKETTPLLLT
Trigger: TGTCAATAACAATGGTGTTGTTTCCTTCAACGTGCTAGTGAGCCAGTTTACACCAGAGTCCTTTCCCCTGACGGACGGGAGGGCCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp ACAAGCCACTCTCTTCCATACAGTATTCATCGTCCCTGCAGGGAATaGTCTCACAGTGGACACTGTTGTCTGTGCCATTGCAGTAGCAGA +
Preference number: 5 (lower is better)
Translates to: TSHSLPYSIHRPCRE*SHSGHCCLCHCSSR
Trigger: TCTGCTACTGCAATGGCACAGACAACAGTGTCCACTGTGAGACCATTCCCTGCAGGGACGATGAATACTGTATGGAAGAGAGTGGCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCAGGTTGTCTGTGCATTaGCCATTAGGAAGGCAGAAC +
Preference number: 5 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPRLSVH*PLGRQN
Trigger: GTTCTGCCTTCCTAATGGCAAATGCACAGACAACCT...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTCCCCACACTCGCCATaGCAGATTTCCTCAAATGTT +
Preference number: 5 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPSPHSP*QISSNV
Trigger: AACATTTGAGGAAATCTGCAATGGCGAGTGTGGGGA...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTCCCGGTCCTCATTCTaGGCTGTTACAATGAACTTG +
Preference number: 5 (lower is better)
Translates to: DQLFWPAFPSDFCSQSFPSRSSF*AVTMNL
Trigger: CAAGTTCATTGTAACAGCCAAGAATGAGGACCGGGA...GGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GGGTTTGAGGATCGGGACGGGCAGGGTGAGGTTCTCCAGGTCTACAAACATCATATGTTGCCAGTGTTGTaGGCACTTTCAATCCAGATT +
Preference number: 5 (lower is better)
Translates to: GFEDRDGQGEVLQVYKHHMLPVL*ALSIQI
Trigger: AATCTGGATTGAAAGTGCCAACAACACTGGCAACAT...ATGATGTTTGTAGACCTGGAGAACCTCACCCTGCCCGTCCCGATCCTCAAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 90 bp GACACCACACCCTTGGACTCCACAGTTGTGCTGTTCTTGTTTCTGTaGATCTCCAACCTCCCCGAAGGATGGAAAAAGGGTAATTCCACA +
Preference number: 5 (lower is better)
Translates to: DTTPLDSTVVLFLFL*ISNLPEGWKKGNST
Trigger: TGTGGAATTACCCTTTTTCCATCCTTCGGGGAGGTTGGAGATTCACAGAAACAAGAACAGCACAACTGTGGAGTCCAAGGGTGTGGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 90 bp CCGGTCCTCATTCTTGGCTGTTACAATGAACTTGGGGAAAGAGTCTaGGATTGGTCTGCTTCCTGTGGTGCAGAGGATAAGAGGACAACT +
Preference number: 5 (lower is better)
Translates to: PVLILGCYNELGERV*DWSASCGAEDKRTT
Trigger: AGTTGTCCTCTTATCCTCTGCACCACAGGAAGCAGACCAATCTCAGACTCTTTCCCCAAGTTCATTGTAACAGCCAAGAATGAGGACCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCTTTCCCTGGCTGGCTTCTGGACATTTGTGGTCTCTaGAATATTTACAATCTCAGG +
Preference number: 5 (lower is better)
Translates to: GQLSHQTSVARAFPGWLLDICGL*NIYNLR
Trigger: CCTGAGATTGTAAATATTCAAGAGACCACAAATGTC...CAGAAGCCAGCCAGGGAAAGCTCTGGCTACAGAAGTCTGATGGGAAAGCTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGCATCAGGCTTCTTCTaGTTGATGTCAATTTCCAAG +
Preference number: 5 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARASGFF*LMSISK
Trigger: CTTGGAAATTGACATCAACAAGAAGAAGCCTGATGC...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS-3UTR CAA 90 bp GCGGGACAGACCAACTTTTCTGGCCAGCTTTCCCATCAGACTTCTGTAGCCAGAGTTCTTTGTGCTCTTTaGAATAATCTGTGGCGATCC +
Preference number: 5 (lower is better)
Translates to: AGQTNFSGQLSHQTSVARVLCAL*NNLWRS
Trigger: GGATCGCCACAGATTATTCAAAAGAGCACAAAGAAC...TCTGGCTACAGAAGTCTGATGGGAAAGCTGGCCAGAAAAGTTGGTCTGTCCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 90 bp GACACTCCGTTCTCCTCTATGCCAATGGTGTTGTCTTTGATGTTCTaGCATCCTCCTTCGATGATGAAGTACCGAAGCTTGTCGTTGCTG +
Preference number: 5 (lower is better)
Translates to: DTPFSSMPMVLSLMF*HPPSMMKYRSLSLL
Trigger: CAGCAACGACAAGCTTCGGTACTTCATCATCGAAGGAGGATGTCAGAACATCAAAGACAACACCATTGGCATAGAGGAGAACGGAGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp GGTGCAGCCATTGGCCGGGTCAATTTCCTTCCCGTCAACTTTAAATaGCCAGCGTCCTGGAACATTGACATTTGTGGTCTCTTGAATATT +
Preference number: 5 (lower is better)
Translates to: GAAIGRVNFLPVNFK*PASWNIDICGLLNI
Trigger: AATATTCAAGAGACCACAAATGTCAATGTTCCAGGACGCTGGGCATTTAAAGTTGACGGGAAGGAAATTGACCCGGCCAATGGCTGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 90 bp TGCCACAGTGAGATCTGGGTCATGATGAGAAGAAGTGTCCAAACTTaGAGTTCCACTGAAGAATTAGAGGCTCTGCAGCTCCTTCCATCT +
Preference number: 5 (lower is better)
Translates to: CHSEIWVMMRRSVQT*SSTEELEALQLLPS
Trigger: AGATGGAAGGAGCTGCAGAGCCTCTAATTCTTCAGTGGAACTTCAAGTTTGGACACTTCTTCTCATCATGACCCAGATCTCACTGTGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 90 bp ACTGGTGTCGATCACCAGAAACCCCTCGCTGCTGTAGATTTTGGTTaGCAAGCCCGTTATAAATGGAACATTTACTTGTGTGCCATTCAC +
Preference number: 5 (lower is better)
Translates to: TGVDHQKPLAAVDFG*QARYKWNIYLCAIH
Trigger: GTGAATGGCACACAAGTAAATGTTCCATTTATAACGGGCTTGGCAACCAAAATCTACAGCAGCGAGGGGTTTCTGGTGATCGACACCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 90 bp AAACCCCTCGCTGCTGTAGATTTTGGTTGCCAAGCCCGTTATAAATaGAACATTTACTTGTGTGCCATTCACCTTGACAGTGTTCCGATC +
Preference number: 5 (lower is better)
Translates to: KPLAAVDFGCQARYK*NIYLCAIHLDSVPI
Trigger: GATCGGAACACTGTCAAGGTGAATGGCACACAAGTAAATGTTCCATTTATAACGGGCTTGGCAACCAAAATCTACAGCAGCGAGGGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 90 bp ACTTTAAATGCCCAGCGTCCTGGAACATTGACATTTGTGGTCTCTTaGATATTTACAATCTCAGGGGTCCTTGATCCCGGAAGACTGAAG +
Preference number: 5 (lower is better)
Translates to: TLNAQRPGTLTFVVS*IFTISGVLDPGRLK
Trigger: CTTCAGTCTTCCGGGATCAAGGACCCCTGAGATTGTAAATATTCAAGAGACCACAAATGTCAATGTTCCAGGACGCTGGGCATTTAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 90 bp ATCGTTGATGAGAATCTGCTCTTCGTTAATGTAGAAATAGACCGGTaGGATGATAGTGAGGTTGGGCGAGGACCACTTGTCGAAGTTGAT +
Preference number: 5 (lower is better)
Translates to: IVDENLLFVNVEIDR*DDSEVGRGPLVEVD
Trigger: ATCAACTTCGACAAGTGGTCCTCGCCCAACCTCACTATCATCTCACCGGTCTATTTCTACATTAACGAAGAGCAGATTCTCATCAACGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 90 bp TGCCAGTGTTGTTGGCACTTTCAATCCAGATTGTGTTTTTATACATaGTATGAGTGCCATTGGACTGCACGATGTTCCCACAGTTCCCTT +
Preference number: 5 (lower is better)
Translates to: CQCCWHFQSRLCFYT*YECHWTARCSHSSL
Trigger: AAGGGAACTGTGGGAACATCGTGCAGTCCAATGGCACTCATATCATGTATAAAAACACAATCTGGATTGAAAGTGCCAACAACACTGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 90 bp GATCCTGGAATTTTGTGGGCAATTAATCTTGCAAGAGTATTTCTCTaGGTCACAGAGGGACACTGCACAGTGAAGATGAACTTCATCGTA +
Preference number: 5 (lower is better)
Translates to: DPGILWAINLARVFL*VTEGHCTVKMNFIV
Trigger: TACGATGAAGTTCATCTTCACTGTGCAGTGTCCCTCTGTGACTCAGAGAAATACTCTTGCAAGATTAATTGCCCACAAAATTCCAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 90 bp ATTGACATTTGTGGTCTCTTGAATATTTACAATCTCAGGGGTCCTTaGTCCCGGAAGACTGAAGAAATTCGTGAGGTTTCCACCATTAAA +
Preference number: 5 (lower is better)
Translates to: IDICGLLNIYNLRGP*SRKTEEIREVSTIK
Trigger: TTTAATGGTGGAAACCTCACGAATTTCTTCAGTCTTCCGGGATCAAGGACCCCTGAGATTGTAAATATTCAAGAGACCACAAATGTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp CTGCACAGAGGCCCGTCGACCCGGCTGGTGCAGATCTaGTCACAGCCGCCGTTGTCTTCACACCAGTCCAGC +
Preference number: 6 (lower is better)
Translates to: LHRGPSTRLVQI*SQPPLSSHQSS
Trigger: GCTGGACTGGTGTGAAGACAACGGCGGCTGTGAGCAGATCTGCACCAGCCGGGTCGACGGGCCTCTGTGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp TGCATTGGCGTGGGTCACACTGGATCAGGTTGCGCCTaGAACAGCGGCAGCGCCGCGTGCAGTCCCCATTCC +
Preference number: 6 (lower is better)
Translates to: CIGVGHTGSGCA*NSGSAACSPHS
Trigger: GGAATGGGGACTGCACGCGGCGCTGCCGCTGTTTCAGGCGCAACCTGATCCAGTGTGACCCACGCCAATGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp GCACCCCACTGCGCAGGGCGCACTCCTCATCTGACTTaGATTGGCGTGGGTCACACTGGATCAGGTTGCGCC +
Preference number: 6 (lower is better)
Translates to: APHCAGRTPHLT*IGVGHTGSGCA
Trigger: GGCGCAACCTGATCCAGTGTGACCCACGCCAATGCAAGTCAGATGAGGAGTGCGCCCTGCGCAGTGGGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp AGTTGGCAGGGAAGCGCAGGAAGGCACCATCGAACGTaGGGAAGACACCACCCCCTGCCGCTAGGCAGTAGG +
Preference number: 6 (lower is better)
Translates to: SWQGSAGRHHRT*GRHHPLPLGSR
Trigger: CCTACTGCCTAGCGGCAGGGGGTGGTGTCTTCCGCACGTTCGATGGTGCCTTCCTGCGCTTCCCTGCCAACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp CGCACCCCACTGCGCAGGGCGCACTCCTCATCTGACTaGCATTGGCGTGGGTCACACTGGATCAGGTTGCGC +
Preference number: 6 (lower is better)
Translates to: RTPLRRAHSSSD*HWRGSHWIRLR
Trigger: GCGCAACCTGATCCAGTGTGACCCACGCCAATGCAAGTCAGATGAGGAGTGCGCCCTGCGCAGTGGGGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp TGCCATTGGTCTTCCAGCTCTGGGCCAGCACCACGCTaGTCACCACGGGTTTCCCCCGCAAGGTCACGTAGT +
Preference number: 6 (lower is better)
Translates to: CHWSSSSGPAPR*SPRVSPARSRS
Trigger: ACTACGTGACCTTGCGGGGGAAACCCGTGGTGAGCAGCGTGGTGCTGGCCCAGAGCTGGAAGACCAATGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp TGCCAAGGGCTTGGCACACCAAGGCGTAGGCCTGAATaGCTTGGCAGAGGAGCGTGCCGTTGTCCCTCACAC +
Preference number: 6 (lower is better)
Translates to: CQGLGTPRRRPE*LGRGACRCPSH
Trigger: GTGTGAGGGACAACGGCACGCTCCTCTGCCAAGCCATTCAGGCCTACGCCTTGGTGTGCCAAGCCCTTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp AGCCCTCGTTGCACTCGCAACCTTCCGTGCATGGAGTaGCACAGTTCTGAGAGGCCGTCAGGTCCGAGCAGG +
Preference number: 6 (lower is better)
Translates to: SPRCTRNLPCME*HSSERPSGPSR
Trigger: CCTGCTCGGACCTGACGGCCTCTCAGAACTGTGCCACTCCATGCACGGAAGGTTGCGAGTGCAACGAGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp CACACTGGCATCCCTCAGAGCAGCTGTCCACACAGATaGGGCCCAAGGCCAGGGTCTCGCAGGTCTCTGTAC +
Preference number: 6 (lower is better)
Translates to: HTGIPQSSCPHR*GPRPGSRRSLY
Trigger: GTACAGAGACCTGCGAGACCCTGGCCTTGGGCCCCATCTGTGTGGACAGCTGCTCTGAGGGATGCCAGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp TCTGACTTGCATTGGCGTGGGTCACACTGGATCAGGTaGCGCCTGAAACAGCGGCAGCGCCGCGTGCAGTCC +
Preference number: 6 (lower is better)
Translates to: SDLHWRGSHWIR*RLKQRQRRVQS
Trigger: GGACTGCACGCGGCGCTGCCGCTGTTTCAGGCGCAACCTGATCCAGTGTGACCCACGCCAATGCAAGTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 90 bp TGGGATGCCAAGGGCTTGGCACACCAAGGCGTAGGCCTGAATGGCTaGGCAGAGGAGCGTGCCGTTGTCCCTCACACTGCACAGGTCGTA +
Preference number: 6 (lower is better)
Translates to: WDAKGLAHQGVGLNG*AEERAVVPHTAQVV
Trigger: TACGACCTGTGCAGTGTGAGGGACAACGGCACGCTCCTCTGCCAAGCCATTCAGGCCTACGCCTTGGTGTGCCAAGCCCTTGGCATCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 90 bp CACTCCTCATCTGACTTGCATTGGCGTGGGTCACACTGGATCAGGTaGCGCCTGAAACAGCGGCAGCGCCGCGTGCAGTCCCCATTCCAG +
Preference number: 6 (lower is better)
Translates to: HSSSDLHWRGSHWIR*RLKQRQRRVQSPFQ
Trigger: CTGGAATGGGGACTGCACGCGGCGCTGCCGCTGTTTCAGGCGCAACCTGATCCAGTGTGACCCACGCCAATGCAAGTCAGATGAGGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp CGGCGCCATCAAATGTGTGTAGTACCTGGTTCTGGCTaGGCAGGCACACCGTCTCCCGCTTGGGGAAGCAGC +
Preference number: 6 (lower is better)
Translates to: RRHQMCVVPGSG*AGTPSPAWGSS
Trigger: GCTGCTTCCCCAAGCGGGAGACGGTGTGCCTGCTCAGCCAGAACCAGGTACTACACACATTTGATGGCGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp CCAAGGCGTAGGCCTGAATGGCTTGGCAGAGGAGCGTaGCGTTGTCCCTCACACTGCACAGGTCGTACACAC +
Preference number: 6 (lower is better)
Translates to: PRRRPEWLGRGA*RCPSHCTGRTH
Trigger: GTGTGTACGACCTGTGCAGTGTGAGGGACAACGGCACGCTCCTCTGCCAAGCCATTCAGGCCTACGCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp GCAGTAGTGATTACAGTCACTCTTCAGGCGGATGGCTaGGCAGCGGGGCTGGCAGACGCTCACACAGCTCTC +
Preference number: 6 (lower is better)
Translates to: AVVITVTLQADG*AAGLADAHTAL
Trigger: GAGAGCTGTGTGAGCGTCTGCCAGCCCCGCTGCGCAGCCATCCGCCTGAAGAGTGACTGTAATCACTACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp TCCTTCCATCTTCTTGCAGGGATCCGGTCACACAGCTaGACAGAGGCCCGTCGACCCGGCTGGTGCAGATCT +
Preference number: 6 (lower is better)
Translates to: SFHLLAGIRSHS*TEARRPGWCRS
Trigger: AGATCTGCACCAGCCGGGTCGACGGGCCTCTGTGCAGCTGTGTGACCGGATCCCTGCAAGAAGATGGAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp TGGTCTCCACTGGGCTGCAGTAGAAGAACCGACCCTTaGGTTCGCACACCTCGTAGGGGCTACAGGAGGCCT +
Preference number: 6 (lower is better)
Translates to: WSPLGCSRRTDP*VRTPRRGYRRP
Trigger: AGGCCTCCTGTAGCCCCTACGAGGTGTGCGAACCCAAGGGTCGGTTCTTCTACTGCAGCCCAGTGGAGACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp CTACGCAGTAGTGATTACAGTCACTCTTCAGGCGGATaGCTGCGCAGCGGGGCTGGCAGACGCTCACACAGC +
Preference number: 6 (lower is better)
Translates to: LRSSDYSHSSGG*LRSGAGRRSHS
Trigger: GCTGTGTGAGCGTCTGCCAGCCCCGCTGCGCAGCCATCCGCCTGAAGAGTGACTGTAATCACTACTGCGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp CACTCCTCATCTGACTTGCATTGGCGTGGGTCACACTaGATCAGGTTGCGCCTGAAACAGCGGCAGCGCCGC +
Preference number: 6 (lower is better)
Translates to: HSSSDLHWRGSH*IRLRLKQRQRR
Trigger: GCGGCGCTGCCGCTGTTTCAGGCGCAACCTGATCCAGTGTGACCCACGCCAATGCAAGTCAGATGAGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp GGGACACACTGGCTGGTGCTGAGGACAAAGCCCTCGTaGCACTCGCAACCTTCCGTGCATGGAGTGGCACAG +
Preference number: 6 (lower is better)
Translates to: GTHWLVLRTKPS*HSQPSVHGVAQ
Trigger: CTGTGCCACTCCATGCACGGAAGGTTGCGAGTGCAACGAGGGCTTTGTCCTCAGCACCAGCCAGTGTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp GACTTCCAAAGCCCCGACGCCTCCTATCTTGACCTCTaGGTCAGCCACGAGGATCCGAACACCCCGGAGCCA +
Preference number: 6 (lower is better)
Translates to: DFQSPDASYLDL*VSHEDPNTPEP
Trigger: TGGCTCCGGGGTGTTCGGATCCTCGTGGCTGACCAAGAGGTCAAGATAGGAGGCGTCGGGGCTTTGGAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 90 bp GGGATCAGGCTGCACAGCTGCTGTACTTTGGAGAAACCTTCCACTTaGGCACAGGATGGGCAGCGGTCCCCACAGCCCACCTGGCAGAAG +
Preference number: 6 (lower is better)
Translates to: GIRLHSCCTLEKPST*AQDGQRSPQPTWQK
Trigger: CTTCTGCCAGGTGGGCTGTGGGGACCGCTGCCCATCCTGTGCCAAAGTGGAAGGTTTCTCCAAAGTACAGCAGCTGTGCAGCCTGATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp AGCCGCACTTGTGCAAAGGGACACACTGGCTGGTGCTaGGGACAAAGCCCTCGTTGCACTCGCAACCTTCCG +
Preference number: 6 (lower is better)
Translates to: SRTCAKGHTGWC*GQSPRCTRNLP
Trigger: CGGAAGGTTGCGAGTGCAACGAGGGCTTTGTCCTCAGCACCAGCCAGTGTGTCCCTTTGCACAAGTGCGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp GCCCATAGCAGGGCTGGAAGAAGCCCTTCATGTCGGTaGGTTTCAGGCAGTAGCCGTCACCCTGCATGGCCT +
Preference number: 6 (lower is better)
Translates to: AHSRAGRSPSCR*VSGSSRHPAWP
Trigger: AGGCCATGCAGGGTGACGGCTACTGCCTGAAACTCACCGACATGAAGGGCTTCTTCCAGCCCTGCTATGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp CATAGCGGGCCACAGAATCACACAGCTCTGACTCATTaGCTCCGCTCTGGCACAGGCGAAACAGGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: HSGPQNHTALTH*LRSGTGETGRC
Trigger: GCACCTGCCTGTTTCGCCTGTGCCAGAGCGGAGGCAATGAGTCAGAGCTGTGTGATTCTGTGGCCCGCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp AGGTCTCATTGGTGGCAAGTTGATGCCCCTCAAAGTTaGAGCCGCACTCGCTCCGAGGGACACACTGGCTGC +
Preference number: 6 (lower is better)
Translates to: RSHWWQVDAPQS*SRTRSEGHTGC
Trigger: GCAGCCAGTGTGTCCCTCGGAGCGAGTGCGGCTGCAACTTTGAGGGGCATCAACTTGCCACCAATGAGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp GCAGCCCCATGGGCATCTCAAGGTCATCATCGGGGTTaGCATTGTAGCGTCCACAGAGGCCATAGGTGCCGT +
Preference number: 6 (lower is better)
Translates to: AAPWASQGHHRG*HCSVHRGHRCR
Trigger: ACGGCACCTATGGCCTCTGTGGACGCTACAATGGCAACCCCGATGATGACCTTGAGATGCCCATGGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp TGCACAGGTCGTACACACAGCTGTGTACAAAAGCCGTaGCATCCACAACAGTGCCGCACTCCCACAGGGGGC +
Preference number: 6 (lower is better)
Translates to: CTGRTHSCVQKP*HPQQCRTPTGG
Trigger: GCCCCCTGTGGGAGTGCGGCACTGTTGTGGATGCCACGGCTTTTGTACACAGCTGTGTGTACGACCTGTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp GACAAAGCCCTCGTTGCACTCGCAACCTTCCGTGCATaGAGTGGCACAGTTCTGAGAGGCCGTCAGGTCCGA +
Preference number: 6 (lower is better)
Translates to: DKALVALATFRA*SGTVLRGRQVR
Trigger: TCGGACCTGACGGCCTCTCAGAACTGTGCCACTCCATGCACGGAAGGTTGCGAGTGCAACGAGGGCTTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp ACTTCCAAAGCCCCGACGCCTCCTATCTTGACCTCTTaGTCAGCCACGAGGATCCGAACACCCCGGAGCCAA +
Preference number: 6 (lower is better)
Translates to: TSKAPTPPILTS*SATRIRTPRSQ
Trigger: TTGGCTCCGGGGTGTTCGGATCCTCGTGGCTGACCAAGAGGTCAAGATAGGAGGCGTCGGGGCTTTGGAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp CCCACCTGGCAGAAGGTGTCTCTCTTCACCCAGCTCTaGCCAAACTCGTTGATACTCAGTGCAGGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: PTWQKVSLFTQL*PNSLILSAGSP
Trigger: GGGGCTGCCTGCACTGAGTATCAACGAGTTTGGCCAGAGCTGGGTGAAGAGAGACACCTTCTGCCAGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp CCACTGCGCAGGGCGCACTCCTCATCTGACTTGCATTaGCGTGGGTCACACTGGATCAGGTTGCGCCTGAAA +
Preference number: 6 (lower is better)
Translates to: PLRRAHSSSDLH*RGSHWIRLRLK
Trigger: TTTCAGGCGCAACCTGATCCAGTGTGACCCACGCCAATGCAAGTCAGATGAGGAGTGCGCCCTGCGCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp CTGCACAGCTGCTGTACTTTGGAGAAACCTTCCACTTaGGCACAGGATGGGCAGCGGTCCCCACAGCCCACC +
Preference number: 6 (lower is better)
Translates to: LHSCCTLEKPST*AQDGQRSPQPT
Trigger: GGTGGGCTGTGGGGACCGCTGCCCATCCTGTGCCAAAGTGGAAGGTTTCTCCAAAGTACAGCAGCTGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp GGGGGTGGCTCAATGCAGCCACATAATTCTCCTCCGTaGTCCAGCTCGCAGGTCCTGTTGGGACAATCCGCC +
Preference number: 6 (lower is better)
Translates to: GGGSMQPHNSPP*SSSQVLLGQSA
Trigger: GGCGGATTGTCCCAACAGGACCTGCGAGCTGGACAACGGAGGAGAATTATGTGGCTGCATTGAGCCACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 90 bp ACACCCAGTTTGGATTCTCCAGTCTCCGATTGGGATGCCAAGGGCTaGGCACACCAAGGCGTAGGCCTGAATGGCTTGGCAGAGGAGCGT +
Preference number: 6 (lower is better)
Translates to: TPSLDSPVSDWDAKG*AHQGVGLNGLAEER
Trigger: ACGCTCCTCTGCCAAGCCATTCAGGCCTACGCCTTGGTGTGCCAAGCCCTTGGCATCCCAATCGGAGACTGGAGAATCCAAACTGGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 90 bp GATCTGGCAGTCCTGGTCTACCCAGAAGGTCTCATTGGTGGCAAGTaGATGCCCCTCAAAGTTGCAGCCGCACTCGCTCCGAGGGACACA +
Preference number: 6 (lower is better)
Translates to: DLAVLVYPEGLIGGK*MPLKVAAALAPRDT
Trigger: TGTGTCCCTCGGAGCGAGTGCGGCTGCAACTTTGAGGGGCATCAACTTGCCACCAATGAGACCTTCTGGGTAGACCAGGACTGCCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp AGCACTGGCATAGCGGGCCACAGAATCACACAGCTCTaGCTCATTGCCTCCGCTCTGGCACAGGCGAAACAG +
Preference number: 6 (lower is better)
Translates to: STGIAGHRITQL*LIASALAQAKQ
Trigger: CTGTTTCGCCTGTGCCAGAGCGGAGGCAATGAGTCAGAGCTGTGTGATTCTGTGGCCCGCTATGCCAGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp CCCCGAATACCACACAGGTACTGGTCTCCACTGGGCTaGAGTAGAAGAACCGACCCTTGGGTTCGCACACCT +
Preference number: 6 (lower is better)
Translates to: PRIPHRYWSPLG*SRRTDPWVRTP
Trigger: AGGTGTGCGAACCCAAGGGTCGGTTCTTCTACTGCAGCCCAGTGGAGACCAGTACCTGTGTGGTATTCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp TGGCTTGGCAGAGGAGCGTGCCGTTGTCCCTCACACTaGACAGGTCGTACACACAGCTGTGTACAAAAGCCG +
Preference number: 6 (lower is better)
Translates to: WLGRGACRCPSH*TGRTHSCVQKP
Trigger: CGGCTTTTGTACACAGCTGTGTGTACGACCTGTGCAGTGTGAGGGACAACGGCACGCTCCTCTGCCAAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp GAAGTCATAGGTCCTCCAGGGGCCCACCTCCACATCTaGATTCTTGCAAGCACTGGCATAGCGGGCCACAGA +
Preference number: 6 (lower is better)
Translates to: EVIGPPGAHLHI*ILASTGIAGHR
Trigger: TCTGTGGCCCGCTATGCCAGTGCTTGCAAGAATGCAGATGTGGAGGTGGGCCCCTGGAGGACCTATGACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp TGGCTCCCCGAATACCACACAGGTACTGGTCTCCACTaGGCTGCAGTAGAAGAACCGACCCTTGGGTTCGCA +
Preference number: 6 (lower is better)
Translates to: WLPEYHTGTGLH*AAVEEPTLGFA
Trigger: TGCGAACCCAAGGGTCGGTTCTTCTACTGCAGCCCAGTGGAGACCAGTACCTGTGTGGTATTCGGGGAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp TCGAAGTCACAGCCGCACTTGTGCAAAGGGACACACTaGCTGGTGCTGAGGACAAAGCCCTCGTTGCACTCG +
Preference number: 6 (lower is better)
Translates to: SKSQPHLCKGTH*LVLRTKPSLHS
Trigger: CGAGTGCAACGAGGGCTTTGTCCTCAGCACCAGCCAGTGTGTCCCTTTGCACAAGTGCGGCTGTGACTTCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp CTGTACTTTGGAGAAACCTTCCACTTTGGCACAGGATaGGCAGCGGTCCCCACAGCCCACCTGGCAGAAGGT +
Preference number: 6 (lower is better)
Translates to: LYFGETFHFGTG*AAVPTAHLAEG
Trigger: ACCTTCTGCCAGGTGGGCTGTGGGGACCGCTGCCCATCCTGTGCCAAAGTGGAAGGTTTCTCCAAAGTACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp ATTTCTGGCAGATGGTTGAGAGCACGAAGGCGCAGTTaGCAGGGAAGCGCAGGAAGGCACCATCGAACGTGC +
Preference number: 6 (lower is better)
Translates to: ISGRWLRARRRS*QGSAGRHHRTC
Trigger: GCACGTTCGATGGTGCCTTCCTGCGCTTCCCTGCCAACTGCGCCTTCGTGCTCTCAACCATCTGCCAGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp GAAGCTTGGGCACCGCACGGTAGACACACACCCAGTTaGGATTCTCCAGTCTCCGATTGGGATGCCAAGGGC +
Preference number: 6 (lower is better)
Translates to: EAWAPHGRHTPS*DSPVSDWDAKG
Trigger: GCCCTTGGCATCCCAATCGGAGACTGGAGAATCCAAACTGGGTGTGTGTCTACCGTGCGGTGCCCAAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp ACATTAACCACCCCATGGCACTCCAGGAAGGAGCTGTaGGAGGGGTCGTTGATGATACCACACCGGGAGCGG +
Preference number: 6 (lower is better)
Translates to: TLTTPWHSRKEL*EGSLMIPHRER
Trigger: CCGCTCCCGGTGTGGTATCATCAACGACCCCTCCAACAGCTCCTTCCTGGAGTGCCATGGGGTGGTTAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp GTCCTGGTCTACCCAGAAGGTCTCATTGGTGGCAAGTaGATGCCCCTCAAAGTTGCAGCCGCACTCGCTCCG +
Preference number: 6 (lower is better)
Translates to: VLVYPEGLIGGK*MPLKVAAALAP
Trigger: CGGAGCGAGTGCGGCTGCAACTTTGAGGGGCATCAACTTGCCACCAATGAGACCTTCTGGGTAGACCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 90 bp AAGCCAGCATTCTGGTTGGGGATCAGGCTGCACAGCTGCTGTACTTaGGAGAAACCTTCCACTTTGGCACAGGATGGGCAGCGGTCCCCA +
Preference number: 6 (lower is better)
Translates to: KPAFWLGIRLHSCCT*EKPSTLAQDGQRSP
Trigger: TGGGGACCGCTGCCCATCCTGTGCCAAAGTGGAAGGTTTCTCCAAAGTACAGCAGCTGTGCAGCCTGATCCCCAACCAGAATGCTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 90 bp ATGCAGCCACATAATTCTCCTCCGTTGTCCAGCTCGCAGGTCCTGTaGGGACAATCCGCCCCCACACAAGGGTCTTCAACCACTCCTGAG +
Preference number: 6 (lower is better)
Translates to: MQPHNSPPLSSSQVL*GQSAPTQGSSTTPE
Trigger: CTCAGGAGTGGTTGAAGACCCTTGTGTGGGGGCGGATTGTCCCAACAGGACCTGCGAGCTGGACAACGGAGGAGAATTATGTGGCTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp AGCCACAGTTGTGGGGCAAGATGCAGCTCTTGCCATTaGGGACGTAGCCTGCATCACACTGGCAGCCCTCTA +
Preference number: 6 (lower is better)
Translates to: SHSCGARCSSCH*GRSLHHTGSPL
Trigger: TAGAGGGCTGCCAGTGTGATGCAGGCTACGTCCTCAATGGCAAGAGCTGCATCTTGCCCCACAACTGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp CTGGAAGGAGATGTCTGGCAATTTCTGGCAGATGGTTaGGAGCACGAAGGCGCAGTTGGCAGGGAAGCGCAG +
Preference number: 6 (lower is better)
Translates to: LEGDVWQFLADG*EHEGAVGREAQ
Trigger: CTGCGCTTCCCTGCCAACTGCGCCTTCGTGCTCTCAACCATCTGCCAGAAATTGCCAGACATCTCCTTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp AATCCTCGCCCTCGATGCCAGAGCACTGCCGGTCATTaGTTCTCACACCCTCTCTCTCAAAGCCCAGCTGGA +
Preference number: 6 (lower is better)
Translates to: NPRPRCQSTAGH*FSHPLSQSPAG
Trigger: TCCAGCTGGGCTTTGAGAGAGAGGGTGTGAGAATCAATGACCGGCAGTGCTCTGGCATCGAGGGCGAGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp CACACCCAGTTTGGATTCTCCAGTCTCCGATTGGGATaGCAAGGGCTTGGCACACCAAGGCGTAGGCCTGAA +
Preference number: 6 (lower is better)
Translates to: HTQFGFSSLRLG*QGLGTPRRRPE
Trigger: TTCAGGCCTACGCCTTGGTGTGCCAAGCCCTTGGCATCCCAATCGGAGACTGGAGAATCCAAACTGGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp GAAGAATTAGAGGCTCTGCAGCTCCTTCCATCTTCTTaGAGGGATCCGGTCACACAGCTGCACAGAGGCCCG +
Preference number: 6 (lower is better)
Translates to: EELEALQLLPSS*RDPVTQLHRGP
Trigger: CGGGCCTCTGTGCAGCTGTGTGACCGGATCCCTGCAAGAAGATGGAAGGAGCTGCAGAGCCTCTAATTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp CTCACCCCGAATTCCATTGTGCACATCTGCCCAGAATaGAGCAATGAAGGCCCTCCCGTCCGTCAGGGGAAA +
Preference number: 6 (lower is better)
Translates to: LTPNSIVHICPE*SNEGPPVRQGK
Trigger: TTTCCCCTGACGGACGGGAGGGCCTTCATTGCTCCATTCTGGGCAGATGTGCACAATGGAATTCGGGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp TGTGGTAGTGTGGCTCCCCGAATACCACACAGGTACTaGTCTCCACTGGGCTGCAGTAGAAGAACCGACCCT +
Preference number: 6 (lower is better)
Translates to: CGSVAPRIPHRY*SPLGCSRRTDP
Trigger: AGGGTCGGTTCTTCTACTGCAGCCCAGTGGAGACCAGTACCTGTGTGGTATTCGGGGAGCCACACTACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp AGACACACACCCAGTTTGGATTCTCCAGTCTCCGATTaGGATGCCAAGGGCTTGGCACACCAAGGCGTAGGC +
Preference number: 6 (lower is better)
Translates to: RHTPSLDSPVSD*DAKGLAHQGVG
Trigger: GCCTACGCCTTGGTGTGCCAAGCCCTTGGCATCCCAATCGGAGACTGGAGAATCCAAACTGGGTGTGTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp AAGCTTGGGCACCGCACGGTAGACACACACCCAGTTTaGATTCTCCAGTCTCCGATTGGGATGCCAAGGGCT +
Preference number: 6 (lower is better)
Translates to: KLGHRTVDTHPV*ILQSPIGMPRA
Trigger: AGCCCTTGGCATCCCAATCGGAGACTGGAGAATCCAAACTGGGTGTGTGTCTACCGTGCGGTGCCCAAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp GTCAGCCACGAGGATCCGAACACCCCGGAGCCAAGCTaGCCCTGCATCAGGCTTCTTCTTGTTGATGTCAAT +
Preference number: 6 (lower is better)
Translates to: VSHEDPNTPEPS*PCIRLLLVDVN
Trigger: ATTGACATCAACAAGAAGAAGCCTGATGCAGGGCCAGCTTGGCTCCGGGGTGTTCGGATCCTCGTGGCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp AGGGGCCCACCTCCACATCTGCATTCTTGCAAGCACTaGCATAGCGGGCCACAGAATCACACAGCTCTGACT +
Preference number: 6 (lower is better)
Translates to: RGPPPHLHSCKH*HSGPQNHTALT
Trigger: AGTCAGAGCTGTGTGATTCTGTGGCCCGCTATGCCAGTGCTTGCAAGAATGCAGATGTGGAGGTGGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp TTGGATTCTCCAGTCTCCGATTGGGATGCCAAGGGCTaGGCACACCAAGGCGTAGGCCTGAATGGCTTGGCA +
Preference number: 6 (lower is better)
Translates to: LDSPVSDWDAKG*AHQGVGLNGLA
Trigger: TGCCAAGCCATTCAGGCCTACGCCTTGGTGTGCCAAGCCCTTGGCATCCCAATCGGAGACTGGAGAATCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp AATTTCTGGCAGATGGTTGAGAGCACGAAGGCGCAGTaGGCAGGGAAGCGCAGGAAGGCACCATCGAACGTG +
Preference number: 6 (lower is better)
Translates to: NFWQMVESTKAQ*AGKRRKAPSNV
Trigger: CACGTTCGATGGTGCCTTCCTGCGCTTCCCTGCCAACTGCGCCTTCGTGCTCTCAACCATCTGCCAGAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp GCTGGAAGGAGATGTCTGGCAATTTCTGGCAGATGGTaGAGAGCACGAAGGCGCAGTTGGCAGGGAAGCGCA +
Preference number: 6 (lower is better)
Translates to: AGRRCLAISGRW*RARRRSWQGSA
Trigger: TGCGCTTCCCTGCCAACTGCGCCTTCGTGCTCTCAACCATCTGCCAGAAATTGCCAGACATCTCCTTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp CATAATTCTCCTCCGTTGTCCAGCTCGCAGGTCCTGTaGGGACAATCCGCCCCCACACAAGGGTCTTCAACC +
Preference number: 6 (lower is better)
Translates to: HNSPPLSSSQVL*GQSAPTQGSST
Trigger: GGTTGAAGACCCTTGTGTGGGGGCGGATTGTCCCAACAGGACCTGCGAGCTGGACAACGGAGGAGAATTATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp AAATCCTCGCCCTCGATGCCAGAGCACTGCCGGTCATaGATTCTCACACCCTCTCTCTCAAAGCCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: KSSPSMPEHCRS*ILTPSLSKPSW
Trigger: CCAGCTGGGCTTTGAGAGAGAGGGTGTGAGAATCAATGACCGGCAGTGCTCTGGCATCGAGGGCGAGGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp CGACCACAAAGACGCCCACGTACAGCACATCCCGAGTaGTCAGCACAACTTCCCCTTGGCGGTAAGGGTGTT +
Preference number: 6 (lower is better)
Translates to: RPQRRPRTAHPE*SAQLPLGGKGV
Trigger: AACACCCTTACCGCCAAGGGGAAGTTGTGCTGACAACTCGGGATGTGCTGTACGTGGGCGTCTTTGTGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 90 bp AGTCAGCTCCGACCACAAAGACGCCCACGTACAGCACATCCCGAGTaGTCAGCACAACTTCCCCTTGGCGGTAAGGGTGTTTGTAGGAAG +
Preference number: 6 (lower is better)
Translates to: SQLRPQRRPRTAHPE*SAQLPLGGKGVCRK
Trigger: CTTCCTACAAACACCCTTACCGCCAAGGGGAAGTTGTGCTGACAACTCGGGATGTGCTGTACGTGGGCGTCTTTGTGGTCGGAGCTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp GAATTCCATTGTGCACATCTGCCCAGAATGGAGCAATaGAGGCCCTCCCGTCCGTCAGGGGAAAGGACTCTG +
Preference number: 6 (lower is better)
Translates to: EFHCAHLPRMEQ*RPSRPSGERTL
Trigger: CAGAGTCCTTTCCCCTGACGGACGGGAGGGCCTTCATTGCTCCATTCTGGGCAGATGTGCACAATGGAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp AGGTGTCTCTCTTCACCCAGCTCTGGCCAAACTCGTTaGTACTCAGTGCAGGCAGCCCCATGGGCATCTCAA +
Preference number: 6 (lower is better)
Translates to: RCLSSPSSGQTR*YSVQAAPWASQ
Trigger: TTGAGATGCCCATGGGGCTGCCTGCACTGAGTATCAACGAGTTTGGCCAGAGCTGGGTGAAGAGAGACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp CTTCACCCAGCTCTGGCCAAACTCGTTGATACTCAGTaGAGGCAGCCCCATGGGCATCTCAAGGTCATCATC +
Preference number: 6 (lower is better)
Translates to: LHPALAKLVDTQ*RQPHGHLKVII
Trigger: GATGATGACCTTGAGATGCCCATGGGGCTGCCTGCACTGAGTATCAACGAGTTTGGCCAGAGCTGGGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp CTGTACAATTGGCGGTGGCCCAGAAGAACTCGCCCATaGTATAGTAGTGGCCATCGAAGTCACAGCCGCACT +
Preference number: 6 (lower is better)
Translates to: LYNWRWPRRTRP*YSSGHRSHSRT
Trigger: AGTGCGGCTGTGACTTCGATGGCCACTACTATACCATGGGCGAGTTCTTCTGGGCCACCGCCAATTGTACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp CCCCTCCCTCTTCGCATAAGCACTGCACTGTACAATTaGCGGTGGCCCAGAAGAACTCGCCCATGGTATAGT +
Preference number: 6 (lower is better)
Translates to: PLPLRISTALYN*RWPRRTRPWYS
Trigger: ACTATACCATGGGCGAGTTCTTCTGGGCCACCGCCAATTGTACAGTGCAGTGCTTATGCGAAGAGGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp GACAGTCGGATGTACAGTAGTCCCACATCGGAGTACTaGACGGACACCACACCCTTGGACTCCACAGTTGTG +
Preference number: 6 (lower is better)
Translates to: DSRMYSSPTSEY*TDTTPLDSTVV
Trigger: CACAACTGTGGAGTCCAAGGGTGTGGTGTCCGTCCAGTACTCCGATGTGGGACTACTGTACATCCGACTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp TCTGGCAGTCCTGGTCTACCCAGAAGGTCTCATTGGTaGCAAGTTGATGCCCCTCAAAGTTGCAGCCGCACT +
Preference number: 6 (lower is better)
Translates to: SGSPGLPRRSHW*QVDAPQSCSRT
Trigger: AGTGCGGCTGCAACTTTGAGGGGCATCAACTTGCCACCAATGAGACCTTCTGGGTAGACCAGGACTGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp AGATCTGGCAGTCCTGGTCTACCCAGAAGGTCTCATTaGTGGCAAGTTGATGCCCCTCAAAGTTGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: RSGSPGLPRRSH*WQVDAPQSCSR
Trigger: GCGGCTGCAACTTTGAGGGGCATCAACTTGCCACCAATGAGACCTTCTGGGTAGACCAGGACTGCCAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp TCTGGTTGGGGATCAGGCTGCACAGCTGCTGTACTTTaGAGAAACCTTCCACTTTGGCACAGGATGGGCAGC +
Preference number: 6 (lower is better)
Translates to: SGWGSGCTAAVL*RNLPLWHRMGS
Trigger: GCTGCCCATCCTGTGCCAAAGTGGAAGGTTTCTCCAAAGTACAGCAGCTGTGCAGCCTGATCCCCAACCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp TGGCTGCATACTGTGAGAACTGTAGCTCGTTGCAGCTaGGGGCGAGAGGTCTCTTCTGCATGCCATTGGTCT +
Preference number: 6 (lower is better)
Translates to: WLHTVRTVARCS*GREVSSACHWS
Trigger: AGACCAATGGCATGCAGAAGAGACCTCTCGCCCCCAGCTGCAACGAGCTACAGTTCTCACAGTATGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS CCA 72 bp ATAATTCTCCTCCGTTGTCCAGCTCGCAGGTCCTGTTaGGACAATCCGCCCCCACACAAGGGTCTTCAACCA +
Preference number: 6 (lower is better)
Translates to: IILLRCPARRSC*DNPPPHKGLQP
Trigger: TGGTTGAAGACCCTTGTGTGGGGGCGGATTGTCCCAACAGGACCTGCGAGCTGGACAACGGAGGAGAATTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp TTTAGCTTGACTTCCAAAGCCCCGACGCCTCCTATCTaGACCTCTTGGTCAGCCACGAGGATCCGAACACCC +
Preference number: 6 (lower is better)
Translates to: FSLTSKAPTPPI*TSWSATRIRTP
Trigger: GGGTGTTCGGATCCTCGTGGCTGACCAAGAGGTCAAGATAGGAGGCGTCGGGGCTTTGGAAGTCAAGCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp TCACATGTGGCTGCATACTGTGAGAACTGTAGCTCGTaGCAGCTGGGGGCGAGAGGTCTCTTCTGCATGCCA +
Preference number: 6 (lower is better)
Translates to: SHVAAYCENCSS*QLGARGLFCMP
Trigger: TGGCATGCAGAAGAGACCTCTCGCCCCCAGCTGCAACGAGCTACAGTTCTCACAGTATGCAGCCACATGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS CAA 90 bp TCGGAGTCATTGTTGCAGGCCTTCAGCAGGTCCCCACACTCGCCATaGCAGATTTCCTCAAATGTTGTCCAGCTCTCCAAGAACACCGCC +
Preference number: 6 (lower is better)
Translates to: SESLLQAFSRSPHSP*QISSNVVQLSKNTA
Trigger: GGCGGTGTTCTTGGAGAGCTGGACAACATTTGAGGAAATCTGCAATGGCGAGTGTGGGGACCTGCTGAAGGCCTGCAACAATGACTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp GGAGCCAAGCTGGCCCTGCATCAGGCTTCTTCTTGTTaGTGTCAATTTCCAAGTACTCAGGACGCTCAGGGC +
Preference number: 6 (lower is better)
Translates to: GAKLALHQASSC*CQFPSTQDAQG
Trigger: GCCCTGAGCGTCCTGAGTACTTGGAAATTGACATCAACAAGAAGAAGCCTGATGCAGGGCCAGCTTGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp TGGGTAGCCATCAAAGGTGAGGTAGTGACCATAGCCTaGGACGATACAGGAAGCATCAGTACGGGGCTGGCA +
Preference number: 6 (lower is better)
Translates to: WVAIKGEVVTIA*DDTGSISTGLA
Trigger: TGCCAGCCCCGTACTGATGCTTCCTGTATCGTCTCAGGCTATGGTCACTACCTCACCTTTGATGGCTACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp CACGAGGATCCGAACACCCCGGAGCCAAGCTGGCCCTaGATCAGGCTTCTTCTTGTTGATGTCAATTTCCAA +
Preference number: 6 (lower is better)
Translates to: HEDPNTPEPSWP*IRLLLVDVNFQ
Trigger: TTGGAAATTGACATCAACAAGAAGAAGCCTGATGCAGGGCCAGCTTGGCTCCGGGGTGTTCGGATCCTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp TCCAGCCGGTCACTGCGATTCCTTGAGTCTGGCAAGTaGTGGCATAGTTTTGTAACCAGCTGCAGGCTGTCT +
Preference number: 6 (lower is better)
Translates to: SSRSLRFLESGK*WHSFVTSCRLS
Trigger: AGACAGCCTGCAGCTGGTTACAAAACTATGCCAGCACTTGCCAGACTCAAGGAATCGCAGTGACCGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp AACCGAACAGGACGTGTAGTTCCTCCAGCCGGTCACTaGGATTCCTTGAGTCTGGCAAGTGCTGGCATAGTT +
Preference number: 6 (lower is better)
Translates to: NRTGRVVPPAGH*DSLSLASAGIV
Trigger: AACTATGCCAGCACTTGCCAGACTCAAGGAATCGCAGTGACCGGCTGGAGGAACTACACGTCCTGTTCGGTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp GAGCTTGCACTTAGATATGGACACTTCCATCTGGGCTaGCTTGCAGGTCACCTCCGCGTCGATGATGTCATG +
Preference number: 6 (lower is better)
Translates to: ELALRYGHFHLG*LAGHLRVDDVM
Trigger: CATGACATCATCGACGCGGAGGTGACCTGCAAGGCAGCCCAGATGGAAGTGTCCATATCTAAGTGCAAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp CCTCTTCGCATAAGCACTGCACTGTACAATTGGCGGTaGCCCAGAAGAACTCGCCCATGGTATAGTAGTGGC +
Preference number: 6 (lower is better)
Translates to: PLRISTALYNWR*PRRTRPWYSSG
Trigger: GCCACTACTATACCATGGGCGAGTTCTTCTGGGCCACCGCCAATTGTACAGTGCAGTGCTTATGCGAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp CACCCTGCATGGCCTGGATGTGCACATTGTCACATGTaGCTGCATACTGTGAGAACTGTAGCTCGTTGCAGC +
Preference number: 6 (lower is better)
Translates to: HPAWPGCAHCHM*LHTVRTVARCS
Trigger: GCTGCAACGAGCTACAGTTCTCACAGTATGCAGCCACATGTGACAATGTGCACATCCAGGCCATGCAGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp TGGAAGAGCTTGCACTTAGATATGGACACTTCCATCTaGGCTGCCTTGCAGGTCACCTCCGCGTCGATGATG +
Preference number: 6 (lower is better)
Translates to: WKSLHLDMDTSI*AALQVTSASMM
Trigger: CATCATCGACGCGGAGGTGACCTGCAAGGCAGCCCAGATGGAAGTGTCCATATCTAAGTGCAAGCTCTTCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp CTCACACCCTCTCTCTCAAAGCCCAGCTGGAAGAGCTaGCACTTAGATATGGACACTTCCATCTGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: LTPSLSKPSWKS*HLDMDTSIWAA
Trigger: GGCAGCCCAGATGGAAGTGTCCATATCTAAGTGCAAGCTCTTCCAGCTGGGCTTTGAGAGAGAGGGTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp GTGGTGAAGCTGCCCTCCTGGGTCGGAACTGTCAGGTaGATGACACTTAGCATAGGCTTCACGACAGAGTCT +
Preference number: 6 (lower is better)
Translates to: VVKLPSWVGTVR*MTLSIGFTTES
Trigger: AGACTCTGTCGTGAAGCCTATGCTAAGTGTCATCAACCTGACAGTTCCGACCCAGGAGGGCAGCTTCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 90 bp CCACATCGGAGTACTGGACGGACACCACACCCTTGGACTCCACAGTaGTGCTGTTCTTGTTTCTGTGAATCTCCAACCTCCCCGAAGGAT +
Preference number: 6 (lower is better)
Translates to: PHRSTGRTPHPWTPQ*CCSCFCESPTSPKD
Trigger: ATCCTTCGGGGAGGTTGGAGATTCACAGAAACAAGAACAGCACAACTGTGGAGTCCAAGGGTGTGGTGTCCGTCCAGTACTCCGATGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 90 bp CCTTCAGCAGGTCCCCACACTCGCCATTGCAGATTTCCTCAAATGTaGTCCAGCTCTCCAAGAACACCGCCAGGTTGTCTGTGCATTTGC +
Preference number: 6 (lower is better)
Translates to: PSAGPHTRHCRFPQM*SSSPRTPPGCLCIC
Trigger: GCAAATGCACAGACAACCTGGCGGTGTTCTTGGAGAGCTGGACAACATTTGAGGAAATCTGCAATGGCGAGTGTGGGGACCTGCTGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 90 bp TGCACATTGTCACATGTGGCTGCATACTGTGAGAACTGTAGCTCGTaGCAGCTGGGGGCGAGAGGTCTCTTCTGCATGCCATTGGTCTTC +
Preference number: 6 (lower is better)
Translates to: CTLSHVAAYCENCSS*QLGARGLFCMPLVF
Trigger: GAAGACCAATGGCATGCAGAAGAGACCTCTCGCCCCCAGCTGCAACGAGCTACAGTTCTCACAGTATGCAGCCACATGTGACAATGTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000042190.14
CDS CAA 90 bp AAGGAGATAAAATCCTCGCCCTCGATGCCAGAGCACTGCCGGTCATaGATTCTCACACCCTCTCTCTCAAAGCCCAGCTGGAAGAGCTTG +
Preference number: 6 (lower is better)
Translates to: KEIKSSPSMPEHCRS*ILTPSLSKPSWKSL
Trigger: CAAGCTCTTCCAGCTGGGCTTTGAGAGAGAGGGTGTGAGAATCAATGACCGGCAGTGCTCTGGCATCGAGGGCGAGGATTTTATCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp TGTTGCAGGCCTTCAGCAGGTCCCCACACTCGCCATTaGAGATTTCCTCAAATGTTGTCCAGCTCTCCAAGA +
Preference number: 6 (lower is better)
Translates to: CCRPSAGPHTRH*RFPQMLSSSPR
Trigger: TCTTGGAGAGCTGGACAACATTTGAGGAAATCTGCAATGGCGAGTGTGGGGACCTGCTGAAGGCCTGCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp GAATGGTCTCACAGTGGACACTGTTGTCTGTGCCATTaGAGTAGCAGAAGATCTGGCAGTCCTGGTCTACCC +
Preference number: 6 (lower is better)
Translates to: EWSHSGHCCLCH*SSRRSGSPGLP
Trigger: GGGTAGACCAGGACTGCCAGATCTTCTGCTACTGCAATGGCACAGACAACAGTGTCCACTGTGAGACCATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp GCGGTAAGGGTGTTTGTAGGAAGCATTTTTATAGAGTaGCATCTTGGTGGTGAAGCTGCCCTCCTGGGTCGG +
Preference number: 6 (lower is better)
Translates to: AVRVFVGSIFIE*HLGGEAALLGR
Trigger: CCGACCCAGGAGGGCAGCTTCACCACCAAGATGGCACTCTATAAAAATGCTTCCTACAAACACCCTTACCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp CTCCCGTCCGTCAGGGGAAAGGACTCTGGTGTAAACTaGCTCACTAGCACGTTGAAGGAAACAACACCATTG +
Preference number: 6 (lower is better)
Translates to: LPSVRGKDSGVN*LTSTLKETTPL
Trigger: CAATGGTGTTGTTTCCTTCAACGTGCTAGTGAGCCAGTTTACACCAGAGTCCTTTCCCCTGACGGACGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp GTCCCACATCGGAGTACTGGACGGACACCACACCCTTaGACTCCACAGTTGTGCTGTTCTTGTTTCTGTGAA +
Preference number: 6 (lower is better)
Translates to: VPHRSTGRTPHP*TPQLCCSCFCE
Trigger: TTCACAGAAACAAGAACAGCACAACTGTGGAGTCCAAGGGTGTGGTGTCCGTCCAGTACTCCGATGTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp TTGCACTTAGATATGGACACTTCCATCTGGGCTGCCTaGCAGGTCACCTCCGCGTCGATGATGTCATGGGAA +
Preference number: 6 (lower is better)
Translates to: LHLDMDTSIWAA*QVTSASMMSWE
Trigger: TTCCCATGACATCATCGACGCGGAGGTGACCTGCAAGGCAGCCCAGATGGAAGTGTCCATATCTAAGTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 90 bp GCTAGAGATGGGTCCCGGTCCTCATTCTTGGCTGTTACAATGAACTaGGGGAAAGAGTCTGAGATTGGTCTGCTTCCTGTGGTGCAGAGG +
Preference number: 6 (lower is better)
Translates to: ARDGSRSSFLAVTMN*GKESEIGLLPVVQR
Trigger: CCTCTGCACCACAGGAAGCAGACCAATCTCAGACTCTTTCCCCAAGTTCATTGTAACAGCCAAGAATGAGGACCGGGACCCATCTCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 90 bp ACCGGTGAGATGATAGTGAGGTTGGGCGAGGACCACTTGTCGAAGTaGATGATGAGCTGGAAGGAGATGTCTGGCAATTTCTGGCAGATG +
Preference number: 6 (lower is better)
Translates to: TGEMIVRLGEDHLSK*MMSWKEMSGNFWQM
Trigger: CATCTGCCAGAAATTGCCAGACATCTCCTTCCAGCTCATCATCAACTTCGACAAGTGGTCCTCGCCCAACCTCACTATCATCTCACCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 90 bp TGGAAGAGCTTGCACTTAGATATGGACACTTCCATCTGGGCTGCCTaGCAGGTCACCTCCGCGTCGATGATGTCATGGGAATTGTTTCCA +
Preference number: 6 (lower is better)
Translates to: WKSLHLDMDTSIWAA*QVTSASMMSWELFP
Trigger: TGGAAACAATTCCCATGACATCATCGACGCGGAGGTGACCTGCAAGGCAGCCCAGATGGAAGTGTCCATATCTAAGTGCAAGCTCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 90 bp TCATTGATTCTCACACCCTCTCTCTCAAAGCCCAGCTGGAAGAGCTaGCACTTAGATATGGACACTTCCATCTGGGCTGCCTTGCAGGTC +
Preference number: 6 (lower is better)
Translates to: SLILTPSLSKPSWKS*HLDMDTSIWAALQV
Trigger: GACCTGCAAGGCAGCCCAGATGGAAGTGTCCATATCTAAGTGCAAGCTCTTCCAGCTGGGCTTTGAGAGAGAGGGTGTGAGAATCAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 90 bp GACGCCCACGTACAGCACATCCCGAGTTGTCAGCACAACTTCCCCTaGGCGGTAAGGGTGTTTGTAGGAAGCATTTTTATAGAGTGCCAT +
Preference number: 6 (lower is better)
Translates to: DAHVQHIPSCQHNFP*AVRVFVGSIFIECH
Trigger: ATGGCACTCTATAAAAATGCTTCCTACAAACACCCTTACCGCCAAGGGGAAGTTGTGCTGACAACTCGGGATGTGCTGTACGTGGGCGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp GTCCTAACTTCAGGGGCAGGTACAACCGCTCATTGTTaGCCAACACAGTGTGCTTGTAAGCCCGGTGTATCA +
Preference number: 6 (lower is better)
Translates to: VLTSGAGTTAHC*PTQCACKPGVS
Trigger: TGATACACCGGGCTTACAAGCACACTGTGTTGGTCAACAATGAGCGGTTGTACCTGCCCCTGAAGTTAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp CCCCATTCCAGAATAGCTGCTTGGGCTCATAGTATTTaGCATCTGAGTAGCAGCCACAGTTGTGGGGCAAGA +
Preference number: 6 (lower is better)
Translates to: PHSRIAAWAHSI*HLSSSHSCGAR
Trigger: TCTTGCCCCACAACTGTGGCTGCTACTCAGATGGCAAATACTATGAGCCCAAGCAGCTATTCTGGAATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp AAGGAGATAAAATCCTCGCCCTCGATGCCAGAGCACTaGCGGTCATTGATTCTCACACCCTCTCTCTCAAAG +
Preference number: 6 (lower is better)
Translates to: KEIKSSPSMPEH*RSLILTPSLSK
Trigger: CTTTGAGAGAGAGGGTGTGAGAATCAATGACCGGCAGTGCTCTGGCATCGAGGGCGAGGATTTTATCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp ATCTACTTTAGGGGTTCTCGTGTCATTCTGCCAAAATaGATACATGAGCTCCCTGGGCTGAGCTTGGTGCCG +
Preference number: 6 (lower is better)
Translates to: IYFRGSRVILPK*IHELPGLSLVP
Trigger: CGGCACCAAGCTCAGCCCAGGGAGCTCATGTATCCATTTTGGCAGAATGACACGAGAACCCCTAAAGTAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp TGTCCTTGGTGGCTCTTCTCAGGATGGCGGGGTCCATaGTTTCTCTGTAATAGATCTCACCCCGAATTCCAT +
Preference number: 6 (lower is better)
Translates to: CPWWLFSGWRGP*FLCNRSHPEFH
Trigger: ATGGAATTCGGGGTGAGATCTATTACAGAGAAACCATGGACCCCGCCATCCTGAGAAGAGCCACCAAGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp AGCCGCAGTAGTCAGAACCAAAGTAGAGGGCCTCAGTaGCTGCATCACACTGAGTACAATTGTCTACACAGC +
Preference number: 6 (lower is better)
Translates to: SRSSQNQSRGPQ*LHHTEYNCLHS
Trigger: GCTGTGTAGACAATTGTACTCAGTGTGATGCAGCCACTGAGGCCCTCTACTTTGGTTCTGACTACTGCGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp ACAGCTACTGGTACATACAGAGTAATGGCTGAAGCTTaGGCACCGCACGGTAGACACACACCCAGTTTGGAT +
Preference number: 6 (lower is better)
Translates to: TATGTYRVMAEA*APHGRHTPSLD
Trigger: ATCCAAACTGGGTGTGTGTCTACCGTGCGGTGCCCAAGCTTCAGCCATTACTCTGTATGTACCAGTAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp CCTCGACGAAGGAACTGTCCTCTAGAGGTGCAGCCATaGGCCGGGTCAATTTCCTTCCCGTCAACTTTAAAT +
Preference number: 6 (lower is better)
Translates to: PRRRNCPLEVQP*AGSISFPSTLN
Trigger: ATTTAAAGTTGACGGGAAGGAAATTGACCCGGCCAATGGCTGCACCTCTAGAGGACAGTTCCTTCGTCGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp CAGCTCTCCAAGAACACCGCCAGGTTGTCTGTGCATTaGCCATTAGGAAGGCAGAACTCATCACTGGCATTG +
Preference number: 6 (lower is better)
Translates to: QLSKNTARLSVH*PLGRQNSSLAL
Trigger: CAATGCCAGTGATGAGTTCTGCCTTCCTAATGGCAAATGCACAGACAACCTGGCGGTGTTCTTGGAGAGCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp GGGTCCCGGTCCTCATTCTTGGCTGTTACAATGAACTaGGGGAAAGAGTCTGAGATTGGTCTGCTTCCTGTG +
Preference number: 6 (lower is better)
Translates to: GSRSSFLAVTMN*GKESEIGLLPV
Trigger: CACAGGAAGCAGACCAATCTCAGACTCTTTCCCCAAGTTCATTGTAACAGCCAAGAATGAGGACCGGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 90 bp ATTGGACTGCACGATGTTCCCACAGTTCCCTTTGGTGTTGTTGATTaGAAAGGAGATAAAATCCTCGCCCTCGATGCCAGAGCACTGCCG +
Preference number: 6 (lower is better)
Translates to: IGLHDVPTVPFGVVD*KGDKILALDARALP
Trigger: CGGCAGTGCTCTGGCATCGAGGGCGAGGATTTTATCTCCTTTCAAATCAACAACACCAAAGGGAACTGTGGGAACATCGTGCAGTCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp CCCTTGGACTCCACAGTTGTGCTGTTCTTGTTTCTGTaGATCTCCAACCTCCCCGAAGGATGGAAAAAGGGT +
Preference number: 6 (lower is better)
Translates to: PLDSTVVLFLFL*ISNLPEGWKKG
Trigger: ACCCTTTTTCCATCCTTCGGGGAGGTTGGAGATTCACAGAAACAAGAACAGCACAACTGTGGAGTCCAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp ACAAGCCACTCTCTTCCATACAGTATTCATCGTCCCTaGAGGGAATGGTCTCACAGTGGACACTGTTGTCTG +
Preference number: 6 (lower is better)
Translates to: TSHSLPYSIHRP*REWSHSGHCCL
Trigger: CAGACAACAGTGTCCACTGTGAGACCATTCCCTGCAGGGACGATGAATACTGTATGGAAGAGAGTGGCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp ATTTGGCAAAGCCAGCATTCTGGTTGGGGATCAGGCTaGACAGCTGCTGTACTTTGGAGAAACCTTCCACTT +
Preference number: 6 (lower is better)
Translates to: IWQSQHSGWGSG*TAAVLWRNLPL
Trigger: AAGTGGAAGGTTTCTCCAAAGTACAGCAGCTGTGCAGCCTGATCCCCAACCAGAATGCTGGCTTTGCCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp TCTCTTCCATACAGTATTCATCGTCCCTGCAGGGAATaGTCTCACAGTGGACACTGTTGTCTGTGCCATTGC +
Preference number: 6 (lower is better)
Translates to: SLPYSIHRPCRE*SHSGHCCLCHC
Trigger: GCAATGGCACAGACAACAGTGTCCACTGTGAGACCATTCCCTGCAGGGACGATGAATACTGTATGGAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CCA 72 bp TTGGGCGAGGACCACTTGTCGAAGTTGATGATGAGCTaGAAGGAGATGTCTGGCAATTTCTGGCAGATGGTT +
Preference number: 6 (lower is better)
Translates to: LGEDHLSKLMMS*KEMSGNFWQMV
Trigger: AACCATCTGCCAGAAATTGCCAGACATCTCCTTCCAGCTCATCATCAACTTCGACAAGTGGTCCTCGCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 90 bp AATGTTGTCCAGCTCTCCAAGAACACCGCCAGGTTGTCTGTGCATTaGCCATTAGGAAGGCAGAACTCATCACTGGCATTGGCATTGAAG +
Preference number: 6 (lower is better)
Translates to: NVVQLSKNTARLSVH*PLGRQNSSLALALK
Trigger: CTTCAATGCCAATGCCAGTGATGAGTTCTGCCTTCCTAATGGCAAATGCACAGACAACCTGGCGGTGTTCTTGGAGAGCTGGACAACATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 90 bp CAGATTTCCTCAAATGTTGTCCAGCTCTCCAAGAACACCGCCAGGTaGTCTGTGCATTTGCCATTAGGAAGGCAGAACTCATCACTGGCA +
Preference number: 6 (lower is better)
Translates to: QISSNVVQLSKNTAR*SVHLPLGRQNSSLA
Trigger: TGCCAGTGATGAGTTCTGCCTTCCTAATGGCAAATGCACAGACAACCTGGCGGTGTTCTTGGAGAGCTGGACAACATTTGAGGAAATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp CAATTTCCAAGTACTCAGGACGCTCAGGGCAGGTCTTaGGTAGGGTATATGATAACTCGGATGGGAATGCGT +
Preference number: 6 (lower is better)
Translates to: QFPSTQDAQGRS*VGYMITRMGMR
Trigger: ACGCATTCCCATCCGAGTTATCATATACCCTACTCAAGACCTGCCCTGAGCGTCCTGAGTACTTGGAAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp AACTGGTCTGGAAGTCAAATGGGTAGCCATCAAAGGTaGGGTAGTGACCATAGCCTGAGACGATACAGGAAG +
Preference number: 6 (lower is better)
Translates to: NWSGSQMGSHQR*GSDHSLRRYRK
Trigger: CTTCCTGTATCGTCTCAGGCTATGGTCACTACCTCACCTTTGATGGCTACCCATTTGACTTCCAGACCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp ATTGGCCGGGTCAATTTCCTTCCCGTCAACTTTAAATaGCCAGCGTCCTGGAACATTGACATTTGTGGTCTC +
Preference number: 6 (lower is better)
Translates to: IGRVNFLPVNFK*PASWNIDICGL
Trigger: GAGACCACAAATGTCAATGTTCCAGGACGCTGGGCATTTAAAGTTGACGGGAAGGAAATTGACCCGGCCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp TCAATTTCCAAGTACTCAGGACGCTCAGGGCAGGTCTaGAGTAGGGTATATGATAACTCGGATGGGAATGCG +
Preference number: 6 (lower is better)
Translates to: SISKYSGRSGQV*SRVYDNSDGNA
Trigger: CGCATTCCCATCCGAGTTATCATATACCCTACTCAAGACCTGCCCTGAGCGTCCTGAGTACTTGGAAATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp TTGGCATTGAAGAAGCCACACAGGCCTCCAGTACAGTaGAAGTACATGGTGGACAGTCGGATGTACAGTAGT +
Preference number: 6 (lower is better)
Translates to: LALKKPHRPPVQ*KYMVDSRMYSS
Trigger: ACTACTGTACATCCGACTGTCCACCATGTACTTCAACTGTACTGGAGGCCTGTGTGGCTTCTTCAATGCCAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp TCAAATGTTGTCCAGCTCTCCAAGAACACCGCCAGGTaGTCTGTGCATTTGCCATTAGGAAGGCAGAACTCA +
Preference number: 6 (lower is better)
Translates to: SNVVQLSKNTAR*SVHLPLGRQNS
Trigger: TGAGTTCTGCCTTCCTAATGGCAAATGCACAGACAACCTGGCGGTGTTCTTGGAGAGCTGGACAACATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp ATGATAGTGAGGTTGGGCGAGGACCACTTGTCGAAGTaGATGATGAGCTGGAAGGAGATGTCTGGCAATTTC +
Preference number: 6 (lower is better)
Translates to: MIVRLGEDHLSK*MMSWKEMSGNF
Trigger: GAAATTGCCAGACATCTCCTTCCAGCTCATCATCAACTTCGACAAGTGGTCCTCGCCCAACCTCACTATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp GAGAATCTGCTCTTCGTTAATGTAGAAATAGACCGGTaGGATGATAGTGAGGTTGGGCGAGGACCACTTGTC +
Preference number: 6 (lower is better)
Translates to: ENLLFVNVEIDR*DDSEVGRGPLV
Trigger: GACAAGTGGTCCTCGCCCAACCTCACTATCATCTCACCGGTCTATTTCTACATTAACGAAGAGCAGATTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp CACGATGTTCCCACAGTTCCCTTTGGTGTTGTTGATTaGAAAGGAGATAAAATCCTCGCCCTCGATGCCAGA +
Preference number: 6 (lower is better)
Translates to: HDVPTVPFGVVD*KGDKILALDAR
Trigger: TCTGGCATCGAGGGCGAGGATTTTATCTCCTTTCAAATCAACAACACCAAAGGGAACTGTGGGAACATCGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp AATTCCACATTGATCGTGCGGTCCCTCGTGATGATGTaGCCAGTGTTGTTGGCACTTTCAATCCAGATTGTG +
Preference number: 6 (lower is better)
Translates to: NSTLIVRSLVMM*PVLLALSIQIV
Trigger: CACAATCTGGATTGAAAGTGCCAACAACACTGGCAACATCATCACGAGGGACCGCACGATCAATGTGGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp GTACAGCACATCCCGAGTTGTCAGCACAACTTCCCCTaGGCGGTAAGGGTGTTTGTAGGAAGCATTTTTATA +
Preference number: 6 (lower is better)
Translates to: VQHIPSCQHNFP*AVRVFVGSIFI
Trigger: TATAAAAATGCTTCCTACAAACACCCTTACCGCCAAGGGGAAGTTGTGCTGACAACTCGGGATGTGCTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp ATTCTTGGCTGTTACAATGAACTTGGGGAAAGAGTCTaGGATTGGTCTGCTTCCTGTGGTGCAGAGGATAAG +
Preference number: 6 (lower is better)
Translates to: ILGCYNELGERV*DWSASCGAEDK
Trigger: CTTATCCTCTGCACCACAGGAAGCAGACCAATCTCAGACTCTTTCCCCAAGTTCATTGTAACAGCCAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp GAGATCTGGGTCATGATGAGAAGAAGTGTCCAAACTTaGAGTTCCACTGAAGAATTAGAGGCTCTGCAGCTC +
Preference number: 6 (lower is better)
Translates to: EIWVMMRRSVQT*SSTEELEALQL
Trigger: GAGCTGCAGAGCCTCTAATTCTTCAGTGGAACTTCAAGTTTGGACACTTCTTCTCATCATGACCCAGATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 90 bp GCGCATGAAAATTCCACATTGATCGTGCGGTCCCTCGTGATGATGTaGCCAGTGTTGTTGGCACTTTCAATCCAGATTGTGTTTTTATAC +
Preference number: 6 (lower is better)
Translates to: AHENSTLIVRSLVMM*PVLLALSIQIVFLY
Trigger: GTATAAAAACACAATCTGGATTGAAAGTGCCAACAACACTGGCAACATCATCACGAGGGACCGCACGATCAATGTGGAATTTTCATGCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp TGTGGTCTCTTGAATATTTACAATCTCAGGGGTCCTTaGTCCCGGAAGACTGAAGAAATTCGTGAGGTTTCC +
Preference number: 6 (lower is better)
Translates to: CGLLNIYNLRGP*SRKTEEIREVS
Trigger: GGAAACCTCACGAATTTCTTCAGTCTTCCGGGATCAAGGACCCCTGAGATTGTAAATATTCAAGAGACCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp TTCTCCTCTATGCCAATGGTGTTGTCTTTGATGTTCTaGCATCCTCCTTCGATGATGAAGTACCGAAGCTTG +
Preference number: 6 (lower is better)
Translates to: FSSMPMVLSLMF*HPPSMMKYRSL
Trigger: CAAGCTTCGGTACTTCATCATCGAAGGAGGATGTCAGAACATCAAAGACAACACCATTGGCATAGAGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS GCA 72 bp GATCACCAGAAACCCCTCGCTGCTGTAGATTTTGGTTaGCAAGCCCGTTATAAATGGAACATTTACTTGTGT +
Preference number: 6 (lower is better)
Translates to: DHQKPLAAVDFG*QARYKWNIYLC
Trigger: ACACAAGTAAATGTTCCATTTATAACGGGCTTGGCAACCAAAATCTACAGCAGCGAGGGGTTTCTGGTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS CAA 72 bp TCTGTGGCGATCCTGGAATTTTGTGGGCAATTAATCTaGCAAGAGTATTTCTCTGAGTCACAGAGGGACACT +
Preference number: 6 (lower is better)
Translates to: SVAILEFCGQLI*QEYFSESQRDT
Trigger: AGTGTCCCTCTGTGACTCAGAGAAATACTCTTGCAAGATTAATTGCCCACAAAATTCCAGGATCGCCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2
CDS TCA 72 bp GCACTTTCAATCCAGATTGTGTTTTTATACATGATATaGGTGCCATTGGACTGCACGATGTTCCCACAGTTC +
Preference number: 6 (lower is better)
Translates to: ALSIQIVFLYMI*VPLDCTMFPQF
Trigger: GAACTGTGGGAACATCGTGCAGTCCAATGGCACTCATATCATGTATAAAAACACAATCTGGATTGAAAGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042190.14
ENSMUST00000160940.2