RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TECPR1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000066621

Ensembl transcript IDs: ENSMUST00000085701.7

Found 270 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAGTCGGGCTTGGCTCTGGCCCTCCTGAAGCACGAGGCATCACCTaGTGGGGCACACATTTGCCATGGGCCAGTCCCTCTCCACAGGAC +
Preference number: 1 (lower is better)
Translates to: RVGLGSGPPEARGIT*WGTHLPWASPSPQD
Trigger: GTCCTGTGGAGAGGGACTGGCCCATGGCAAATGTGTGCCCCAGCAGGTGATGCCTCGTGCTTCAGGAGGGCCAGAGCCAAGCCCGACTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR CCA 90 bp GCCTCTCTAGGGCCAGAATGTATGGAGGGCTCTGAGTTCCTGGCCTaGAAAGATGGGAGGTATTGCAGGCAGGGACCGGGGCTGAGGGAC +
Preference number: 1 (lower is better)
Translates to: ASLGPECMEGSEFLA*KDGRYCRQGPGLRD
Trigger: GTCCCTCAGCCCCGGTCCCTGCCTGCAATACCTCCCATCTTTCCAGGCCAGGAACTCAGAGCCCTCCATACATTCTGGCCCTAGAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR TCA 90 bp AGTGAGAGGGTACGTCACCCTGGTGACACCCTGGCGGTGCTCAGCTaGGAAACATGTGCAGAAGAACACAGAGGTCACGGCCGCTGGGGA +
Preference number: 1 (lower is better)
Translates to: SERVRHPGDTLAVLS*ETCAEEHRGHGRWG
Trigger: TCCCCAGCGGCCGTGACCTCTGTGTTCTTCTGCACATGTTTCTCAGCTGAGCACCGCCAGGGTGTCACCAGGGTGACGTACCCTCTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR TCA 90 bp CAGATGCCCCCTTGGGACCCTGACACTGACATGAGGGCAACCCCTTaGTGCCTCTCTGCACGTGGGTGTGTCTGCTCTCACCTCTGGAAA +
Preference number: 1 (lower is better)
Translates to: QMPPWDPDTDMRATP*CLSARGCVCSHLWK
Trigger: TTTCCAGAGGTGAGAGCAGACACACCCACGTGCAGAGAGGCATCAAGGGGTTGCCCTCATGTCAGTGTCAGGGTCCCAAGGGGGCATCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR GCA 90 bp CTGGCCCTCCTGAAGCACGAGGCATCACCTGCTGGGGCACACATTTaGCATGGGCCAGTCCCTCTCCACAGGACACAGATTTCTTCCTTC +
Preference number: 1 (lower is better)
Translates to: LALLKHEASPAGAHI*HGPVPLHRTQISSF
Trigger: GAAGGAAGAAATCTGTGTCCTGTGGAGAGGGACTGGCCCATGGCAAATGTGTGCCCCAGCAGGTGATGCCTCGTGCTTCAGGAGGGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR GCA 90 bp TGCTCAGCAGTGAGAGGGTACGTCACCCTGGTGACACCCTGGCGGTaGTCAGCTGAGAAACATGTGCAGAAGAACACAGAGGTCACGGCC +
Preference number: 1 (lower is better)
Translates to: CSAVRGYVTLVTPWR*SAEKHVQKNTEVTA
Trigger: GGCCGTGACCTCTGTGTTCTTCTGCACATGTTTCTCAGCTGAGCACCGCCAGGGTGTCACCAGGGTGACGTACCCTCTCACTGCTGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR CCA 90 bp TGTTGGTGCTCAGCAGTGAGAGGGTACGTCACCCTGGTGACACCCTaGCGGTGCTCAGCTGAGAAACATGTGCAGAAGAACACAGAGGTC +
Preference number: 1 (lower is better)
Translates to: CWCSAVRGYVTLVTP*RCSAEKHVQKNTEV
Trigger: GACCTCTGTGTTCTTCTGCACATGTTTCTCAGCTGAGCACCGCCAGGGTGTCACCAGGGTGACGTACCCTCTCACTGCTGAGCACCAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR GCA 90 bp ATCCTGCAACACAGTCCTGCAACACAGTCCTGTGCAAGCAGACCCTaGCCCCTTCCTGAAGGAGGGACGACACTGGAGTTCATAATGCTG +
Preference number: 1 (lower is better)
Translates to: ILQHSPATQSCASRP*PLPEGGTTLEFIML
Trigger: CAGCATTATGAACTCCAGTGTCGTCCCTCCTTCAGGAAGGGGGCAGGGTCTGCTTGCACAGGACTGTGTTGCAGGACTGTGTTGCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR CCA 90 bp CCCTGGGTGATGCCCTCCCATACAGCACAAGAAAGATTTCAGTTCTaGTTCTGCAGGCTCAGACCATCCTTGCCTCCAGGTGAGGAGTGG +
Preference number: 1 (lower is better)
Translates to: PWVMPSHTAQERFQF*FCRLRPSLPPGEEW
Trigger: CCACTCCTCACCTGGAGGCAAGGATGGTCTGAGCCTGCAGAACCAGAACTGAAATCTTTCTTGTGCTGTATGGGAGGGCATCACCCAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR CCA 90 bp CCTCCTGAAGCACGAGGCATCACCTGCTGGGGCACACATTTGCCATaGGCCAGTCCCTCTCCACAGGACACAGATTTCTTCCTTCAAATC +
Preference number: 1 (lower is better)
Translates to: PPEARGITCWGTHLP*ASPSPQDTDFFLQI
Trigger: GATTTGAAGGAAGAAATCTGTGTCCTGTGGAGAGGGACTGGCCCATGGCAAATGTGTGCCCCAGCAGGTGATGCCTCGTGCTTCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR TCA 90 bp GAAATGGCTGACTCTGACCTGACTCCTTGGGTGTGGGGCCCTGGGTaGTGCCCTCCCATACAGCACAAGAAAGATTTCAGTTCTGGTTCT +
Preference number: 1 (lower is better)
Translates to: EMADSDLTPWVWGPG*CPPIQHKKDFSSGS
Trigger: AGAACCAGAACTGAAATCTTTCTTGTGCTGTATGGGAGGGCATCACCCAGGGCCCCACACCCAAGGAGTCAGGTCAGAGTCAGCCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR GCA 90 bp TCTCCACAGGACACAGATTTCTTCCTTCAAATCCAAAGTGCAGGCTaGCTCCACCCAGACCTGGCCATCCTGCAACACAGTCCTGCAACA +
Preference number: 1 (lower is better)
Translates to: SPQDTDFFLQIQSAG*LHPDLAILQHSPAT
Trigger: TGTTGCAGGACTGTGTTGCAGGATGGCCAGGTCTGGGTGGAGGCAGCCTGCACTTTGGATTTGAAGGAAGAAATCTGTGTCCTGTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR CCA 90 bp ATTTCTTCCTTCAAATCCAAAGTGCAGGCTGCCTCCACCCAGACCTaGCCATCCTGCAACACAGTCCTGCAACACAGTCCTGTGCAAGCA +
Preference number: 1 (lower is better)
Translates to: ISSFKSKVQAASTQT*PSCNTVLQHSPVQA
Trigger: TGCTTGCACAGGACTGTGTTGCAGGACTGTGTTGCAGGATGGCCAGGTCTGGGTGGAGGCAGCCTGCACTTTGGATTTGAAGGAAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR TCA 90 bp GAGCCCCAAACCTCCAGGATAAGACCTGTACCCATCTTGGTAGATTaGGGCGGGGTCTTATGTAGTCCAGGCTGGCCTCAAACTTATTAT +
Preference number: 1 (lower is better)
Translates to: EPQTSRIRPVPILVD*GGVLCSPGWPQTYY
Trigger: ATAATAAGTTTGAGGCCAGCCTGGACTACATAAGACCCCGCCTCAATCTACCAAGATGGGTACAGGTCTTATCCTGGAGGTTTGGGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR TCA 90 bp AGAACACAGAGGTCACGGCCGCTGGGGACAGACCCAGATGCCCCCTTGGGACCCTGGCTCTGGCCCTCCTaGAGCACGAGGCATCACCTG +
Preference number: 2 (lower is better)
Translates to: RTQRSRPLGTDPDAPLGPWLWPS*STRHHL
Trigger: CAGGTGATGCCTCGTGCTTCAGGAGGGCCAGAGCCA...GGGTCCCAAGGGGGCATCTGGGTCTGTCCCCAGCGGCCGTGACCTCTGTGTTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR TCA 90 bp CTCACGATCCTCCTGCCTCAGTTTCCTGAGTGCAGGGCCTATGGGCATCCAGCCTGGCTGACTCTGACCTaGCTCCTTGGGTGTGGGGCC +
Preference number: 2 (lower is better)
Translates to: LTILLPQFPECRAYGHPAWLTLT*LLGCGA
Trigger: GGCCCCACACCCAAGGAGTCAGGTCAGAGTCAGCCA...GGCTGGATGCCCATAGGCCCTGCACTCAGGAAACTGAGGCAGGAGGATCGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR TCA 90 bp TGCTCAGCAGTGAGAGGGTACGTCACCCTGGTGACACCCTGGCGGTGCTCAGCTCCTGCCTCAGTTTCCTaGGTGCAGGGCCTATGGGCA +
Preference number: 2 (lower is better)
Translates to: CSAVRGYVTLVTPWRCSAPASVS*VQGLWA
Trigger: TGCCCATAGGCCCTGCACTCAGGAAACTGAGGCAGG...AGCTGAGCACCGCCAGGGTGTCACCAGGGTGACGTACCCTCTCACTGCTGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR CCA 90 bp CATCACCTGCTGGGGCACACATTTGCCATGGGCCAGTCCCTCTCCACAGGACACTTGGGTGTGGGGCCCTaGGTGATGCCCTCCCATACA +
Preference number: 2 (lower is better)
Translates to: HHLLGHTFAMGQSLSTGHLGVGP*VMPSHT
Trigger: TGTATGGGAGGGCATCACCCAGGGCCCCACACCCAA...GTGTCCTGTGGAGAGGGACTGGCCCATGGCAAATGTGTGCCCCAGCAGGTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR GCA 90 bp GGTGCTCAGCTGAGAAACATGTGCAGAAGAACACAGAGGTCACGGCCGCTGGGGGGTCCTCCCTGCCTCTaGCTCTCTAGGGCCAGAATG +
Preference number: 2 (lower is better)
Translates to: GAQLRNMCRRTQRSRPLGGPPCL*LSRARM
Trigger: CATTCTGGCCCTAGAGAGGCAGAGGCAGGGAGGACC...CCCCAGCGGCCGTGACCTCTGTGTTCTTCTGCACATGTTTCTCAGCTGAGCACC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR GCA 90 bp GCCTCTCTGCACGTGGGTGTGTCTGCTCTCACCTCTGGAAATTCGGAGGACATGGGCTCAGACCATCCTTaGCTCCAGGTGAGGAGTGGC +
Preference number: 2 (lower is better)
Translates to: ASLHVGVSALTSGNSEDMGSDHP*LQVRSG
Trigger: GCCACTCCTCACCTGGAGGCAAGGATGGTCTGAGCC...CATGTCCTCCGAATTTCCAGAGGTGAGAGCAGACACACCCACGTGCAGAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR GCA 90 bp CTCTGCACGTGGGTGTGTCTGCTCTCACCTCTGGAAATTCGGAGGACATGGAGCTGTGCAAGCAGACCCTaGCCCCTTCCTGAAGGAGGG +
Preference number: 2 (lower is better)
Translates to: LCTWVCLLSPLEIRRTWSCASRP*PLPEGG
Trigger: CCCTCCTTCAGGAAGGGGGCAGGGTCTGCTTGCACA...GCTCCATGTCCTCCGAATTTCCAGAGGTGAGAGCAGACACACCCACGTGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR GCA 90 bp TGCTCAGCAGTGAGAGGGTACGTCACCCTGGTGACACCCTGGCGGTGCTCAGCTAACTCACGATCCTCCTaGCTCAGTTTCCTGAGTGCA +
Preference number: 2 (lower is better)
Translates to: CSAVRGYVTLVTPWRCSANSRSS*LSFLSA
Trigger: TGCACTCAGGAAACTGAGGCAGGAGGATCGTGAGTT...AGCTGAGCACCGCCAGGGTGTCACCAGGGTGACGTACCCTCTCACTGCTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR GCA 90 bp GCCTCTCTGCACGTGGGTGTGTCTGCTCTCACCTCTGGAAATTCGGAGGACATGTGCAACACAGTCCTGTaGAAGCAGACCCTGCCCCCT +
Preference number: 2 (lower is better)
Translates to: ASLHVGVSALTSGNSEDMCNTVL*KQTLPP
Trigger: AGGGGGCAGGGTCTGCTTGCACAGGACTGTGTTGCA...CATGTCCTCCGAATTTCCAGAGGTGAGAGCAGACACACCCACGTGCAGAGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR CCA 90 bp CCTGGCCATCCTGCAACACAGTCCTGCAACACAGTCCTGTGCAAGCAGACCCTGAGGGCTCTGAGTTCCTaGCCTGGAAAGATGGGAGGT +
Preference number: 2 (lower is better)
Translates to: PGHPATQSCNTVLCKQTLRALSS*PGKMGG
Trigger: ACCTCCCATCTTTCCAGGCCAGGAACTCAGAGCCCT...CAGGGTCTGCTTGCACAGGACTGTGTTGCAGGACTGTGTTGCAGGATGGCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR CCA 90 bp AGAACACAGAGGTCACGGCCGCTGGGGACAGACCCAGATGCCCCCTTGGGACCCGCCTCAAACTTATTATaGAGCCTGAGGATACCCTTG +
Preference number: 2 (lower is better)
Translates to: RTQRSRPLGTDPDAPLGPASNLL*SLRIPL
Trigger: CAAGGGTATCCTCAGGCTCCATAATAAGTTTGAGGC...GGGTCCCAAGGGGGCATCTGGGTCTGTCCCCAGCGGCCGTGACCTCTGTGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR GCA 90 bp GCCTCTCTGCACGTGGGTGTGTCTGCTCTCACCTCTGGAAATTCGGAGGACATGCAGACCTGGCCATCCTaGAACACAGTCCTGCAACAC +
Preference number: 2 (lower is better)
Translates to: ASLHVGVSALTSGNSEDMQTWPS*NTVLQH
Trigger: GTGTTGCAGGACTGTGTTGCAGGATGGCCAGGTCTG...CATGTCCTCCGAATTTCCAGAGGTGAGAGCAGACACACCCACGTGCAGAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR GCA 90 bp GGCGGTGCTCAGCTGAGAAACATGTGCAGAAGAACACAGAGGTCACGGCCGCTGCCTTCAAATCCAAAGTaGAGGCTGCCTCCACCCAGA +
Preference number: 2 (lower is better)
Translates to: GGAQLRNMCRRTQRSRPLPSNPK*RLPPPR
Trigger: TCTGGGTGGAGGCAGCCTGCACTTTGGATTTGAAGG...CAGCGGCCGTGACCTCTGTGTTCTTCTGCACATGTTTCTCAGCTGAGCACCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR CCA 90 bp CTCACGATCCTCCTGCCTCAGTTTCCTGAGTGCAGGGCCTATGGGCATCCAGCCGCAGTTTCACACCTCTaGCATTTTGCCAGTGCTGCA +
Preference number: 2 (lower is better)
Translates to: LTILLPQFPECRAYGHPAAVSHL*HFASAA
Trigger: TGCAGCACTGGCAAAATGCCAGAGGTGTGAAACTGC...GGCTGGATGCCCATAGGCCCTGCACTCAGGAAACTGAGGCAGGAGGATCGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR GCA 90 bp TGTGCAGAAGAACACAGAGGTCACGGCCGCTGGGGACAGACCCAGATGCCCCCTGGGCATCCAGCCCTTTaGTTAACTTTTGAAGCAAAA +
Preference number: 2 (lower is better)
Translates to: CAEEHRGHGRWGQTQMPPGHPAL*LTFEAK
Trigger: TTTTGCTTCAAAAGTTAAGCAAAGGGCTGGATGCCC...AGGGGGCATCTGGGTCTGTCCCCAGCGGCCGTGACCTCTGTGTTCTTCTGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR GCA 90 bp TTTGCCAGTGCTGCAGAAATGGCTGACTCTGACCTGACTCCTTGGGTGTGGGGCTTTCAGTTCTGGTTCTaGAGGCTCAGACCATCCTTG +
Preference number: 2 (lower is better)
Translates to: FASAAEMADSDLTPWVWGFQFWF*RLRPSL
Trigger: CAAGGATGGTCTGAGCCTGCAGAACCAGAACTGAAA...GCCCCACACCCAAGGAGTCAGGTCAGAGTCAGCCATTTCTGCAGCACTGGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR CCA 90 bp GGTGCTCAGCTGAGAAACATGTGCAGAAGAACACAGAGGTCACGGCCGCTGGGGTTATGTAGTCCAGGCTaGCCTCAAACTTATTATGGA +
Preference number: 2 (lower is better)
Translates to: GAQLRNMCRRTQRSRPLGLCSPG*PQTYYG
Trigger: TCCATAATAAGTTTGAGGCCAGCCTGGACTACATAA...CCCCAGCGGCCGTGACCTCTGTGTTCTTCTGCACATGTTTCTCAGCTGAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR TCA 90 bp CTGTCCAGGACATCAAACGGGGAGGATTCTGGGACAAACCAGTTAGGGCTCTGTATACCCTTGAATTCCTaGTCTTGCCTTCACCTTCAG +
Preference number: 2 (lower is better)
Translates to: LSRTSNGEDSGTNQLGLCIPLNS*SCLHLQ
Trigger: CTGAAGGTGAAGGCAAGATCAGGAATTCAAGGGTAT...ACAGAGCCCTAACTGGTTTGTCCCAGAATCCTCCCCGTTTGATGTCCTGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR CCA 72 bp GGCTCTGGCCCTCCTGAAGCACGAGGCATCACCTGCTaGGGCACACATTTGCCATGGGCCAGTCCCTCTCCA +
Preference number: 3 (lower is better)
Translates to: GSGPPEARGITC*GTHLPWASPSP
Trigger: TGGAGAGGGACTGGCCCATGGCAAATGTGTGCCCCAGCAGGTGATGCCTCGTGCTTCAGGAGGGCCAGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR GCA 72 bp CTTGGCTCTGGCCCTCCTGAAGCACGAGGCATCACCTaGTGGGGCACACATTTGCCATGGGCCAGTCCCTCT +
Preference number: 3 (lower is better)
Translates to: LGSGPPEARGIT*WGTHLPWASPS
Trigger: AGAGGGACTGGCCCATGGCAAATGTGTGCCCCAGCAGGTGATGCCTCGTGCTTCAGGAGGGCCAGAGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR TCA 72 bp GGAAAGATGGGAGGTATTGCAGGCAGGGACCGGGGCTaGGGGACCCAGACAGTAGTTACCACGGCTCTTCCC +
Preference number: 3 (lower is better)
Translates to: GKMGGIAGRDRG*GTQTVVTTALP
Trigger: GGGAAGAGCCGTGGTAACTACTGTCTGGGTCCCTCAGCCCCGGTCCCTGCCTGCAATACCTCCCATCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR CCA 72 bp GGGCCAGAATGTATGGAGGGCTCTGAGTTCCTGGCCTaGAAAGATGGGAGGTATTGCAGGCAGGGACCGGGG +
Preference number: 3 (lower is better)
Translates to: GPECMEGSEFLA*KDGRYCRQGPG
Trigger: CCCCGGTCCCTGCCTGCAATACCTCCCATCTTTCCAGGCCAGGAACTCAGAGCCCTCCATACATTCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR GCA 72 bp CACAGTCCTGCAACACAGTCCTGTGCAAGCAGACCCTaGCCCCTTCCTGAAGGAGGGACGACACTGGAGTTC +
Preference number: 3 (lower is better)
Translates to: HSPATQSCASRP*PLPEGGTTLEF
Trigger: GAACTCCAGTGTCGTCCCTCCTTCAGGAAGGGGGCAGGGTCTGCTTGCACAGGACTGTGTTGCAGGACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR CAA 90 bp GCCTCTCTGCACGTGGGTGTGTCTGCTCTCACCTCTGGAAATTCGGAGGACATGGAAAGATGGGAGGTATaGCAGGCAGGGACCGGGGCT +
Preference number: 3 (lower is better)
Translates to: ASLHVGVSALTSGNSEDMERWEV*QAGTGA
Trigger: AGCCCCGGTCCCTGCCTGCAATACCTCCCATCTTTC...CATGTCCTCCGAATTTCCAGAGGTGAGAGCAGACACACCCACGTGCAGAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR CAA 90 bp GGCGGTGCTCAGCTGAGAAACATGTGCAGAAGAACACAGAGGTCACGGCCGCTGGAGCCACTCATGTCCTaGGGATGGGACCCCAGAGTA +
Preference number: 3 (lower is better)
Translates to: GGAQLRNMCRRTQRSRPLEPLMS*GWDPRV
Trigger: TACTCTGGGGTCCCATCCCAAGGACATGAGTGGCTC...CAGCGGCCGTGACCTCTGTGTTCTTCTGCACATGTTTCTCAGCTGAGCACCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR TCA 72 bp GTACGTCACCCTGGTGACACCCTGGCGGTGCTCAGCTaGGAAACATGTGCAGAAGAACACAGAGGTCACGGC +
Preference number: 3 (lower is better)
Translates to: VRHPGDTLAVLS*ETCAEEHRGHG
Trigger: GCCGTGACCTCTGTGTTCTTCTGCACATGTTTCTCAGCTGAGCACCGCCAGGGTGTCACCAGGGTGACGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR GCA 72 bp CTGAAGCACGAGGCATCACCTGCTGGGGCACACATTTaGCATGGGCCAGTCCCTCTCCACAGGACACAGATT +
Preference number: 3 (lower is better)
Translates to: LKHEASPAGAHI*HGPVPLHRTQI
Trigger: AATCTGTGTCCTGTGGAGAGGGACTGGCCCATGGCAAATGTGTGCCCCAGCAGGTGATGCCTCGTGCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR CCA 72 bp GCACGAGGCATCACCTGCTGGGGCACACATTTGCCATaGGCCAGTCCCTCTCCACAGGACACAGATTTCTTC +
Preference number: 3 (lower is better)
Translates to: ARGITCWGTHLP*ASPSPQDTDFF
Trigger: GAAGAAATCTGTGTCCTGTGGAGAGGGACTGGCCCATGGCAAATGTGTGCCCCAGCAGGTGATGCCTCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR CAA 90 bp CACAGTCCTGCAACACAGTCCTGTGCAAGCAGACCCTGCCCCCTTCCTGAAGGACACACCTCTGGCATTTaGCCAGTGCTGCAGAAATGG +
Preference number: 3 (lower is better)
Translates to: HSPATQSCASRPCPLPEGHTSGI*PVLQKW
Trigger: CCATTTCTGCAGCACTGGCAAAATGCCAGAGGTGTG...TCCTTCAGGAAGGGGGCAGGGTCTGCTTGCACAGGACTGTGTTGCAGGACTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR GCA 72 bp GTGAGAGGGTACGTCACCCTGGTGACACCCTGGCGGTaGTCAGCTGAGAAACATGTGCAGAAGAACACAGAG +
Preference number: 3 (lower is better)
Translates to: VRGYVTLVTPWR*SAEKHVQKNTE
Trigger: CTCTGTGTTCTTCTGCACATGTTTCTCAGCTGAGCACCGCCAGGGTGTCACCAGGGTGACGTACCCTCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR CCA 72 bp TCAGCAGTGAGAGGGTACGTCACCCTGGTGACACCCTaGCGGTGCTCAGCTGAGAAACATGTGCAGAAGAAC +
Preference number: 3 (lower is better)
Translates to: SAVRGYVTLVTP*RCSAEKHVQKN
Trigger: GTTCTTCTGCACATGTTTCTCAGCTGAGCACCGCCAGGGTGTCACCAGGGTGACGTACCCTCTCACTGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR TCA 72 bp GACTCTGACCTGACTCCTTGGGTGTGGGGCCCTGGGTaGTGCCCTCCCATACAGCACAAGAAAGATTTCAGT +
Preference number: 3 (lower is better)
Translates to: DSDLTPWVWGPG*CPPIQHKKDFS
Trigger: ACTGAAATCTTTCTTGTGCTGTATGGGAGGGCATCACCCAGGGCCCCACACCCAAGGAGTCAGGTCAGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR TCA 72 bp CTCTGCCTCTCTAGGGCCAGAATGTATGGAGGGCTCTaGGTTCCTGGCCTGGAAAGATGGGAGGTATTGCAG +
Preference number: 3 (lower is better)
Translates to: LCLSRARMYGGL*VPGLERWEVLQ
Trigger: CTGCAATACCTCCCATCTTTCCAGGCCAGGAACTCAGAGCCCTCCATACATTCTGGCCCTAGAGAGGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR CCA 72 bp TTCAAATCCAAAGTGCAGGCTGCCTCCACCCAGACCTaGCCATCCTGCAACACAGTCCTGCAACACAGTCCT +
Preference number: 3 (lower is better)
Translates to: FKSKVQAASTQT*PSCNTVLQHSP
Trigger: AGGACTGTGTTGCAGGACTGTGTTGCAGGATGGCCAGGTCTGGGTGGAGGCAGCCTGCACTTTGGATTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR CCA 72 bp TGCCTCTCTGCACGTGGGTGTGTCTGCTCTCACCTCTaGAAATTCGGAGGACATGGAGCCACTCATGTCCTT +
Preference number: 3 (lower is better)
Translates to: CLSARGCVCSHL*KFGGHGATHVL
Trigger: AAGGACATGAGTGGCTCCATGTCCTCCGAATTTCCAGAGGTGAGAGCAGACACACCCACGTGCAGAGAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR GCA 72 bp GACACAGATTTCTTCCTTCAAATCCAAAGTGCAGGCTaGCTCCACCCAGACCTGGCCATCCTGCAACACAGT +
Preference number: 3 (lower is better)
Translates to: DTDFFLQIQSAG*LHPDLAILQHS
Trigger: ACTGTGTTGCAGGATGGCCAGGTCTGGGTGGAGGCAGCCTGCACTTTGGATTTGAAGGAAGAAATCTGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR CAA 90 bp CTCTGCACGTGGGTGTGTCTGCTCTCACCTCTGGAAATTCGGAGGACATGGAGCGAAGCAAAACTCCATTaGGAAAACCTGCTGAGGAGT +
Preference number: 3 (lower is better)
Translates to: LCTWVCLLSPLEIRRTWSEAKLH*ENLLRS
Trigger: ACTCCTCAGCAGGTTTTCCAAATGGAGTTTTGCTTC...GCTCCATGTCCTCCGAATTTCCAGAGGTGAGAGCAGACACACCCACGTGCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR-3UTR CAA 90 bp ACCTCTGGAAATTCGGAGGACATGGAGCCACTCATGTCCTTGGGATGGGACCCCCTTGAATTCCTGATCTaGCCTTCACCTTCAGAGTAC +
Preference number: 3 (lower is better)
Translates to: TSGNSEDMEPLMSLGWDPLEFLI*PSPSEY
Trigger: GTACTCTGAAGGTGAAGGCAAGATCAGGAATTCAAG...GGGGTCCCATCCCAAGGACATGAGTGGCTCCATGTCCTCCGAATTTCCAGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR TCA 72 bp AACTTATTATGGAGCCTGAGGATACCCTTGAATTCCTaGTCTTGCCTTCACCTTCAGAGTACAGACATGGCG +
Preference number: 3 (lower is better)
Translates to: NLLWSLRIPLNS*SCLHLQSTDMA
Trigger: CGCCATGTCTGTACTCTGAAGGTGAAGGCAAGATCAGGAATTCAAGGGTATCCTCAGGCTCCATAATAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
3UTR CCA 72 bp ATTCCTGATCTTGCCTTCACCTTCAGAGTACAGACATaGCGTGCCTGGCGTATTTATCTAGATTTTCTTTTT +
Preference number: 3 (lower is better)
Translates to: IPDLAFTFRVQT*RAWRIYLDFLF
Trigger: AAAAAGAAAATCTAGATAAATACGCCAGGCACGCCATGTCTGTACTCTGAAGGTGAAGGCAAGATCAGGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp GGCATCACCTGCTGGGGCACACATTTGCCATGGGCCAGTCCCTCTCCACAGGACGGTTGTCGCCGGCGATaGCCCAGCAGCACTGGGTGG +
Preference number: 4 (lower is better)
Translates to: GITCWGTHLPWASPSPQDGCRRR*PSSTGW
Trigger: CCACCCAGTGCTGCTGGGGCATCGCCGGCGACAACC...GTCCTGTGGAGAGGGACTGGCCCATGGCAAATGTGTGCCCCAGCAGGTGATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp AGAACACAGAGGTCACGGCCGCTGGGGACAGACCCAGATGCCCCCTTGGGACCCCCCAGCCTCCGCCAATaGCATAGTCCCAGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: RTQRSRPLGTDPDAPLGPPSLRQ*HSPSPV
Trigger: GACAGGGCTGGGACTATGGCATTGGCGGAGGCTGGG...GGGTCCCAAGGGGGCATCTGGGTCTGTCCCCAGCGGCCGTGACCTCTGTGTTCT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp GTAGAGTCGGGCTTGGCTCTGGCCCTCCTGAAGCACGAGGCATCACCTGCTGGGATGCCCCAGCAGCACTaGGTGGCCGCACTGACCCTC +
Preference number: 4 (lower is better)
Translates to: VESGLALALLKHEASPAGMPQQH*VAALTL
Trigger: GAGGGTCAGTGCGGCCACCCAGTGCTGCTGGGGCAT...CCCAGCAGGTGATGCCTCGTGCTTCAGGAGGGCCAGAGCCAAGCCCGACTCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR TCA 90 bp AGAACACAGAGGTCACGGCCGCTGGGGACAGACCCAGATGCCCCCTTGGGACCCCTTGGGGTCATCCTTTaGGGGGATCTTGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RTQRSRPLGTDPDAPLGPLGVIL*GDLGPG
Trigger: TCCTGGGCCAAGATCCCCTCAAAGGATGACCCCAAG...GGGTCCCAAGGGGGCATCTGGGTCTGTCCCCAGCGGCCGTGACCTCTGTGTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR TCA 90 bp AGAACACAGAGGTCACGGCCGCTGGGGACAGACCCAGATGCCCCCTTGGGACCCTGTCACCCTTGCAAGTaGCAGACCAGATGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: RTQRSRPLGTDPDAPLGPCHPCK*QTRWPA
Trigger: CGCAGGCCATCTGGTCTGTCACTTGCAAGGGTGACA...GGGTCCCAAGGGGGCATCTGGGTCTGTCCCCAGCGGCCGTGACCTCTGTGTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp GTAGAGTCGGGCTTGGCTCTGGCCCTCCTGAAGCACGAGGCATCACCTGCTGGGTCATGTCTTGCTCTGTaGCGGCAGCCAGGCGTACGG +
Preference number: 4 (lower is better)
Translates to: VESGLALALLKHEASPAGSCLAL*RQPGVR
Trigger: CCGTACGCCTGGCTGCCGCCACAGAGCAAGACATGA...CCCAGCAGGTGATGCCTCGTGCTTCAGGAGGGCCAGAGCCAAGCCCGACTCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR TCA 90 bp GAGGGCTCTGAGTTCCTGGCCTGGAAAGATGGGAGGTATTGCAGGCAGGGACCGCAGGCCCACAGAGGATaGTCATCTGCCCCGTACGGC +
Preference number: 4 (lower is better)
Translates to: EGSEFLAWKDGRYCRQGPQAHRG*SSAPYG
Trigger: GCCGTACGGGGCAGATGATCATCCTCTGTGGGCCTG...CGGTCCCTGCCTGCAATACCTCCCATCTTTCCAGGCCAGGAACTCAGAGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR TCA 90 bp CAGACCTGGCCATCCTGCAACACAGTCCTGCAACACAGTCCTGTGCAAGCAGACCCCCGTCGTGCCCTGTaGACTGCTCCAGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: QTWPSCNTVLQHSPVQADPRRAL*TAPGPH
Trigger: GTGTGGCCCTGGAGCAGTTCACAGGGCACGACGGGG...GTCTGCTTGCACAGGACTGTGTTGCAGGACTGTGTTGCAGGATGGCCAGGTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp TATTGCAGGCAGGGACCGGGGCTGAGGGACCCAGACAGTAGTTACCACGGCTCTCGTACGGCTCCTCCATaGCCATCGGGAAGAGCCCCA +
Preference number: 4 (lower is better)
Translates to: YCRQGPGLRDPDSSYHGSRTAPP*PSGRAP
Trigger: TGGGGCTCTTCCCGATGGGCATGGAGGAGCCGTACG...AGAGCCGTGGTAACTACTGTCTGGGTCCCTCAGCCCCGGTCCCTGCCTGCAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp CTCACGATCCTCCTGCCTCAGTTTCCTGAGTGCAGGGCCTATGGGCATCCAGCCTCGTGCCCTGTGAACTaGTCCAGGGCCACACGGACG +
Preference number: 4 (lower is better)
Translates to: LTILLPQFPECRAYGHPASCPVN*SRATRT
Trigger: CGTCCGTGTGGCCCTGGAGCAGTTCACAGGGCACGA...GGCTGGATGCCCATAGGCCCTGCACTCAGGAAACTGAGGCAGGAGGATCGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp TATTGCAGGCAGGGACCGGGGCTGAGGGACCCAGACAGTAGTTACCACGGCTCTTCTCGAGCCCCGTCGTaGCCTGTGAACTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: YCRQGPGLRDPDSSYHGSSRAPS*PVNCSR
Trigger: CCTGGAGCAGTTCACAGGGCACGACGGGGCTCGAGA...AGAGCCGTGGTAACTACTGTCTGGGTCCCTCAGCCCCGGTCCCTGCCTGCAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp CATCACCTGCTGGGGCACACATTTGCCATGGGCCAGTCCCTCTCCACAGGACACGGCCCACAGCTGATCTaGACCACCTCCCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: HHLLGHTFAMGQSLSTGHGPQLI*TTSPGV
Trigger: AACCCCAGGGGAGGTGGTCCAGATCAGCTGTGGGCC...GTGTCCTGTGGAGAGGGACTGGCCCATGGCAAATGTGTGCCCCAGCAGGTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp GTAGAGTCGGGCTTGGCTCTGGCCCTCCTGAAGCACGAGGCATCACCTGCTGGGGCCCATATAAGGTCGTaGGGCCCACAGCTGATCTGG +
Preference number: 4 (lower is better)
Translates to: VESGLALALLKHEASPAGAHIRS*GPQLIW
Trigger: CCAGATCAGCTGTGGGCCCCACGACCTTATATGGGC...CCCAGCAGGTGATGCCTCGTGCTTCAGGAGGGCCAGAGCCAAGCCCGACTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp GGCATCACCTGCTGGGGCACACATTTGCCATGGGCCAGTCCCTCTCCACAGGACCTCGGCCCACGACAATaGCCTTCCATGTCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: GITCWGTHLPWASPSPQDLGPRQ*PSMSSR
Trigger: GCGGGAAGACATGGAAGGCCATTGTCGTGGGCCGAG...GTCCTGTGGAGAGGGACTGGCCCATGGCAAATGTGTGCCCCAGCAGGTGATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp CACAGTCCTGCAACACAGTCCTGTGCAAGCAGACCCTGCCCCCTTCCTGAAGGAGGGGATGGGCGTCCATaGACCTTCCGGCTCTCGCAG +
Preference number: 4 (lower is better)
Translates to: HSPATQSCASRPCPLPEGGDGRP*TFRLSQ
Trigger: CTGCGAGAGCCGGAAGGTCCATGGACGCCCATCCCC...TCCTTCAGGAAGGGGGCAGGGTCTGCTTGCACAGGACTGTGTTGCAGGACTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp CTCACGATCCTCCTGCCTCAGTTTCCTGAGTGCAGGGCCTATGGGCATCCAGCCTGTCGCCAGAACATCTaGTCGCAGGGCAGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LTILLPQFPECRAYGHPACRQNI*SQGSRR
Trigger: GCGCCTGCTGCCCTGCGACCAGATGTTCTGGCGACA...GGCTGGATGCCCATAGGCCCTGCACTCAGGAAACTGAGGCAGGAGGATCGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp GGTGCTCAGCTGAGAAACATGTGCAGAAGAACACAGAGGTCACGGCCGCTGGGGCAGTCACCAGCTGGCTaGGAGGGAGACACGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GAQLRNMCRRTQRSRPLGQSPAG*EGDTEP
Trigger: GGGCTCCGTGTCTCCCTCCCAGCCAGCTGGTGACTG...CCCCAGCGGCCGTGACCTCTGTGTTCTTCTGCACATGTTTCTCAGCTGAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp TGTGCAGAAGAACACAGAGGTCACGGCCGCTGGGGACAGACCCAGATGCCCCCTATACATGCTCCCAGCTaGAGCCCTGCGGGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: CAEEHRGHGRWGQTQMPPIHAPS*SPAGSW
Trigger: CCAGCTACCCGCAGGGCTCCAGCTGGGAGCATGTAT...AGGGGGCATCTGGGTCTGTCCCCAGCGGCCGTGACCTCTGTGTTCTTCTGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp TGCTCAGCAGTGAGAGGGTACGTCACCCTGGTGACACCCTGGCGGTGCTCAGCTGCAATCACCCAGACCTaGTCCAGGGGTCCCACAGAC +
Preference number: 4 (lower is better)
Translates to: CSAVRGYVTLVTPWRCSAAITQT*SRGPTD
Trigger: GTCTGTGGGACCCCTGGACCAGGTCTGGGTGATTGC...AGCTGAGCACCGCCAGGGTGTCACCAGGGTGACGTACCCTCTCACTGCTGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp GGTGCTCAGCTGAGAAACATGTGCAGAAGAACACAGAGGTCACGGCCGCTGGGGACAGACCAGATGGCCTaGGGGGATGGGCGTCCATGG +
Preference number: 4 (lower is better)
Translates to: GAQLRNMCRRTQRSRPLGTDQMA*GDGRPW
Trigger: CCATGGACGCCCATCCCCGCAGGCCATCTGGTCTGT...CCCCAGCGGCCGTGACCTCTGTGTTCTTCTGCACATGTTTCTCAGCTGAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp GGCGGTGCTCAGCTGAGAAACATGTGCAGAAGAACACAGAGGTCACGGCCGCTGTGGTCAGTGCCAACATaGAGCCAGGAGGAGCCCGCG +
Preference number: 4 (lower is better)
Translates to: GGAQLRNMCRRTQRSRPLWSVPT*SQEEPA
Trigger: CGCGGGCTCCTCCTGGCTGCATGTTGGCACTGACCA...CAGCGGCCGTGACCTCTGTGTTCTTCTGCACATGTTTCTCAGCTGAGCACCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp GGTGCTCAGCTGAGAAACATGTGCAGAAGAACACAGAGGTCACGGCCGCTGGGGTCCAGCGGCCGATGCTaGAGCCCACTCACGTCACTC +
Preference number: 4 (lower is better)
Translates to: GAQLRNMCRRTQRSRPLGSSGRC*SPLTSL
Trigger: GAGTGACGTGAGTGGGCTCCAGCATCGGCCGCTGGA...CCCCAGCGGCCGTGACCTCTGTGTTCTTCTGCACATGTTTCTCAGCTGAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp GCCTCTCTGCACGTGGGTGTGTCTGCTCTCACCTCTGGAAATTCGGAGGACATGGATGGCCTGCGGGGATaGGCGTCCATGGACCTTCCG +
Preference number: 4 (lower is better)
Translates to: ASLHVGVSALTSGNSEDMDGLRG*ASMDLP
Trigger: CGGAAGGTCCATGGACGCCCATCCCCGCAGGCCATC...CATGTCCTCCGAATTTCCAGAGGTGAGAGCAGACACACCCACGTGCAGAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp TGCTCAGCAGTGAGAGGGTACGTCACCCTGGTGACACCCTGGCGGTGCTCAGCTCCAGCCACGGCCCACTaGTCACCAGCTTGCATTTTC +
Preference number: 4 (lower is better)
Translates to: CSAVRGYVTLVTPWRCSAPATAH*SPACIF
Trigger: GAAAATGCAAGCTGGTGACCAGTGGGCCGTGGCTGG...AGCTGAGCACCGCCAGGGTGTCACCAGGGTGACGTACCCTCTCACTGCTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp AGAACACAGAGGTCACGGCCGCTGGGGACAGACCCAGATGCCCCCTTGGGACCCAGCATGTGCACTCTCTaGGATGATGGACACGTCGCT +
Preference number: 4 (lower is better)
Translates to: RTQRSRPLGTDPDAPLGPSMCTL*DDGHVA
Trigger: AGCGACGTGTCCATCATCCCAGAGAGTGCACATGCT...GGGTCCCAAGGGGGCATCTGGGTCTGTCCCCAGCGGCCGTGACCTCTGTGTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp GACCCAGACAGTAGTTACCACGGCTCTTCCCCGCAGCATCCCTCACAGACTCAGCCAGCAGTCACCAGCTaGCTGGGAGGGAGACACGGA +
Preference number: 4 (lower is better)
Translates to: DPDSSYHGSSPQHPSQTQPAVTS*LGGRHG
Trigger: TCCGTGTCTCCCTCCCAGCCAGCTGGTGACTGCTGG...CTGAGTCTGTGAGGGATGCTGCGGGGAAGAGCCGTGGTAACTACTGTCTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp CTCACGATCCTCCTGCCTCAGTTTCCTGAGTGCAGGGCCTATGGGCATCCAGCCGGAGGGGAGGGGATGTaGTACCAGCAGTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: LTILLPQFPECRAYGHPAGGEGM*YQQSPA
Trigger: AGCTGGTGACTGCTGGTACCACATCCCCTCCCCTCC...GGCTGGATGCCCATAGGCCCTGCACTCAGGAAACTGAGGCAGGAGGATCGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp CATCACCTGCTGGGGCACACATTTGCCATGGGCCAGTCCCTCTCCACAGGACACTCCTTGGGACCCTGGTaGCATTGGCCCGGACAGAGA +
Preference number: 4 (lower is better)
Translates to: HHLLGHTFAMGQSLSTGHSLGPW*HWPGQR
Trigger: TCTCTGTCCGGGCCAATGCCACCAGGGTCCCAAGGA...GTGTCCTGTGGAGAGGGACTGGCCCATGGCAAATGTGTGCCCCAGCAGGTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR TCA 90 bp TGCTCAGCAGTGAGAGGGTACGTCACCCTGGTGACACCCTGGCGGTGCTCAGCTATCCACGTACCAGTCTaGCTCCCATTCCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: CSAVRGYVTLVTPWRCSAIHVPV*LPFPVW
Trigger: CCACACTGGGAATGGGAGTCAGACTGGTACGTGGAT...AGCTGAGCACCGCCAGGGTGTCACCAGGGTGACGTACCCTCTCACTGCTGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR TCA 90 bp TTTGCCAGTGCTGCAGAAATGGCTGACTCTGACCTGACTCCTTGGGTGTGGGGCGGATACAGCCCACACTaGCAGGCGGCCGACTGGTTC +
Preference number: 4 (lower is better)
Translates to: FASAAEMADSDLTPWVWGGYSPH*QAADWF
Trigger: GAACCAGTCGGCCGCCTGTCAGTGTGGGCTGTATCC...GCCCCACACCCAAGGAGTCAGGTCAGAGTCAGCCATTTCTGCAGCACTGGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR TCA 90 bp GACCCAGACAGTAGTTACCACGGCTCTTCCCCGCAGCATCCCTCACAGACTCAGTCCATGTCTTCCCGCTaGGCTCGCTGGGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: DPDSSYHGSSPQHPSQTQSMSSR*ARWESH
Trigger: GTGTGACTCCCAGCGAGCTCAGCGGGAAGACATGGA...CTGAGTCTGTGAGGGATGCTGCGGGGAAGAGCCGTGGTAACTACTGTCTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR TCA 90 bp CTCTGCACGTGGGTGTGTCTGCTCTCACCTCTGGAAATTCGGAGGACATGGAGCCGAGCTGCCAGAGTGTaGCCGGTCACTTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LCTWVCLLSPLEIRRTWSRAARV*PVTFSA
Trigger: GGCCGAGAAAGTGACCGGTCACACTCTGGCAGCTCG...GCTCCATGTCCTCCGAATTTCCAGAGGTGAGAGCAGACACACCCACGTGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR TCA 90 bp GACCCAGACAGTAGTTACCACGGCTCTTCCCCGCAGCATCCCTCACAGACTCAGAGAAGCAGCCAGCACTaGGGAGACTGGACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: DPDSSYHGSSPQHPSQTQRSSQH*GDWTSC
Trigger: GCAGCTCGTCCAGTCTCCTCAGTGCTGGCTGCTTCT...CTGAGTCTGTGAGGGATGCTGCGGGGAAGAGCCGTGGTAACTACTGTCTGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp GCCTCTCTGCACGTGGGTGTGTCTGCTCTCACCTCTGGAAATTCGGAGGACATGCCATCCAGCGGCCGATaGTGGAGCCCACTCACGTCA +
Preference number: 4 (lower is better)
Translates to: ASLHVGVSALTSGNSEDMPSSGR*WSPLTS
Trigger: TGACGTGAGTGGGCTCCAGCATCGGCCGCTGGATGG...CATGTCCTCCGAATTTCCAGAGGTGAGAGCAGACACACCCACGTGCAGAGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp GGCGGTGCTCAGCTGAGAAACATGTGCAGAAGAACACAGAGGTCACGGCCGCTGGACAGGGACAGCGTCTaGACTGAAGGGGACAGGCCT +
Preference number: 4 (lower is better)
Translates to: GGAQLRNMCRRTQRSRPLDRDSV*TEGDRP
Trigger: AGGCCTGTCCCCTTCAGTGCAGACGCTGTCCCTGTC...CAGCGGCCGTGACCTCTGTGTTCTTCTGCACATGTTTCTCAGCTGAGCACCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp TGCTCAGCAGTGAGAGGGTACGTCACCCTGGTGACACCCTGGCGGTGCTCAGCTAGTTGCTGGAAGATCTaGTTCCTCCAGGCAGCCGTC +
Preference number: 4 (lower is better)
Translates to: CSAVRGYVTLVTPWRCSASCWKI*FLQAAV
Trigger: GACGGCTGCCTGGAGGAAGCAGATCTTCCAGCAACT...AGCTGAGCACCGCCAGGGTGTCACCAGGGTGACGTACCCTCTCACTGCTGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp CTCACGATCCTCCTGCCTCAGTTTCCTGAGTGCAGGGCCTATGGGCATCCAGCCACCTGTGTCAGCTTCTaGTTGGGAGGGGAGGGGATG +
Preference number: 4 (lower is better)
Translates to: LTILLPQFPECRAYGHPATCVSF*LGGEGM
Trigger: CATCCCCTCCCCTCCCAAGCAGAAGCTGACACAGGT...GGCTGGATGCCCATAGGCCCTGCACTCAGGAAACTGAGGCAGGAGGATCGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp CAGACCTGGCCATCCTGCAACACAGTCCTGCAACACAGTCCTGTGCAAGCAGACGCTGGGGGTGATCCCTaGTCGGTACCACAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: QTWPSCNTVLQHSPVQADAGGDP*SVPQVP
Trigger: GGGAACCTGTGGTACCGAGCAGGGATCACCCCCAGC...GTCTGCTTGCACAGGACTGTGTTGCAGGACTGTGTTGCAGGATGGCCAGGTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp ACCTCTGGAAATTCGGAGGACATGGAGCCACTCATGTCCTTGGGATGGGACCCCACTCACGTCACTCCATaGCCAGCGGTCGCTCGGCAG +
Preference number: 4 (lower is better)
Translates to: TSGNSEDMEPLMSLGWDPTHVTP*PAVARQ
Trigger: CTGCCGAGCGACCGCTGGCCATGGAGTGACGTGAGT...GGGGTCCCATCCCAAGGACATGAGTGGCTCCATGTCCTCCGAATTTCCAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp GGTGCTCAGCTGAGAAACATGTGCAGAAGAACACAGAGGTCACGGCCGCTGGGGCCAGGAGGAGCCTTCTaGGTTGGGGTGGCTGACATC +
Preference number: 4 (lower is better)
Translates to: GAQLRNMCRRTQRSRPLGPGGAF*VGVADI
Trigger: GATGTCAGCCACCCCAACCCAGAAGGCTCCTCCTGG...CCCCAGCGGCCGTGACCTCTGTGTTCTTCTGCACATGTTTCTCAGCTGAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp GGCGGTGCTCAGCTGAGAAACATGTGCAGAAGAACACAGAGGTCACGGCCGCTGCTGGACCACCTCCCCTaGGGTTTCCACGAGAGACCA +
Preference number: 4 (lower is better)
Translates to: GGAQLRNMCRRTQRSRPLLDHLP*GFHERP
Trigger: TGGTCTCTCGTGGAAACCCCAGGGGAGGTGGTCCAG...CAGCGGCCGTGACCTCTGTGTTCTTCTGCACATGTTTCTCAGCTGAGCACCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp CACAGTCCTGCAACACAGTCCTGTGCAAGCAGACCCTGCCCCCTTCCTGAAGGAACGGGCTTCCAGGTCTaGGCTGGGCTCGCTCACAAA +
Preference number: 4 (lower is better)
Translates to: HSPATQSCASRPCPLPEGTGFQV*AGLAHK
Trigger: TTTGTGAGCGAGCCCAGCCCAGACCTGGAAGCCCGT...TCCTTCAGGAAGGGGGCAGGGTCTGCTTGCACAGGACTGTGTTGCAGGACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp GCCTCTCTGCACGTGGGTGTGTCTGCTCTCACCTCTGGAAATTCGGAGGACATGCCCCGGCTCAGGCCATaGCTCCCCTGGACTTTGTTG +
Preference number: 4 (lower is better)
Translates to: ASLHVGVSALTSGNSEDMPRLRP*LPWTLL
Trigger: CAACAAAGTCCAGGGGAGCCATGGCCTGAGCCGGGG...CATGTCCTCCGAATTTCCAGAGGTGAGAGCAGACACACCCACGTGCAGAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR TCA 90 bp GCCTCTCTGCACGTGGGTGTGTCTGCTCTCACCTCTGGAAATTCGGAGGACATGGGCTGTTGGCCTCTATaGTCCGCAAGTGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: ASLHVGVSALTSGNSEDMGCWPL*SASGLP
Trigger: TGGGAGGCCACTTGCGGATCATAGAGGCCAACAGCC...CATGTCCTCCGAATTTCCAGAGGTGAGAGCAGACACACCCACGTGCAGAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp GGCATCACCTGCTGGGGCACACATTTGCCATGGGCCAGTCCCTCTCCACAGGACTACCACACCTTTCCCTaGAGGGATACAGCCCACACT +
Preference number: 4 (lower is better)
Translates to: GITCWGTHLPWASPSPQDYHTFP*RDTAHT
Trigger: AGTGTGGGCTGTATCCCTGCAGGGAAAGGTGTGGTA...GTCCTGTGGAGAGGGACTGGCCCATGGCAAATGTGTGCCCCAGCAGGTGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp CATCACCTGCTGGGGCACACATTTGCCATGGGCCAGTCCCTCTCCACAGGACACTCTCGATCCAGCTGGTaGCACAGGGGTTGTGAGAGT +
Preference number: 4 (lower is better)
Translates to: HHLLGHTFAMGQSLSTGHSRSSW*HRGCES
Trigger: ACTCTCACAACCCCTGTGGCACCAGCTGGATCGAGA...GTGTCCTGTGGAGAGGGACTGGCCCATGGCAAATGTGTGCCCCAGCAGGTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp CTCTGCACGTGGGTGTGTCTGCTCTCACCTCTGGAAATTCGGAGGACATGGAGCGGAGACTGGACGAGCTaGCAGAGTGTGACCGGTCAC +
Preference number: 4 (lower is better)
Translates to: LCTWVCLLSPLEIRRTWSGDWTS*QSVTGH
Trigger: GTGACCGGTCACACTCTGGCAGCTCGTCCAGTCTCC...GCTCCATGTCCTCCGAATTTCCAGAGGTGAGAGCAGACACACCCACGTGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp GGCATCACCTGCTGGGGCACACATTTGCCATGGGCCAGTCCCTCTCCACAGGACGATCAGGGAGTTCCTTaGGGTCATCCTTTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GITCWGTHLPWASPSPQDDQGVP*GHPLRG
Trigger: TCCCCTCAAAGGATGACCCCAAGGAACTCCCTGATC...GTCCTGTGGAGAGGGACTGGCCCATGGCAAATGTGTGCCCCAGCAGGTGATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp GACCCAGACAGTAGTTACCACGGCTCTTCCCCGCAGCATCCCTCACAGACTCAGACAGAGGCGAAGGGCTaGTCAGTGCCAACATGCAGC +
Preference number: 4 (lower is better)
Translates to: DPDSSYHGSSPQHPSQTQTEAKG*SVPTCS
Trigger: GCTGCATGTTGGCACTGACCAGCCCTTCGCCTCTGT...CTGAGTCTGTGAGGGATGCTGCGGGGAAGAGCCGTGGTAACTACTGTCTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp GGCGGTGCTCAGCTGAGAAACATGTGCAGAAGAACACAGAGGTCACGGCCGCTGATGCAGAGCCATCCCTaGCCACAGCCCACACCTGAT +
Preference number: 4 (lower is better)
Translates to: GGAQLRNMCRRTQRSRPLMQSHP*PQPTPD
Trigger: ATCAGGTGTGGGCTGTGGCCAGGGATGGCTCTGCAT...CAGCGGCCGTGACCTCTGTGTTCTTCTGCACATGTTTCTCAGCTGAGCACCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp TTTGCCAGTGCTGCAGAAATGGCTGACTCTGACCTGACTCCTTGGGTGTGGGGCTGTTCCTTGGGACCCTaGTGGCATTGGCCCGGACAG +
Preference number: 4 (lower is better)
Translates to: FASAAEMADSDLTPWVWGCSLGP*WHWPGQ
Trigger: CTGTCCGGGCCAATGCCACCAGGGTCCCAAGGAACA...GCCCCACACCCAAGGAGTCAGGTCAGAGTCAGCCATTTCTGCAGCACTGGCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR TCA 90 bp CAGACCTGGCCATCCTGCAACACAGTCCTGCAACACAGTCCTGTGCAAGCAGACAGGGGTTGTGAGAGTTaGCACCCCTCCGGAACCACA +
Preference number: 4 (lower is better)
Translates to: QTWPSCNTVLQHSPVQADRGCES*HPSGTT
Trigger: TGTGGTTCCGGAGGGGTGTCAACTCTCACAACCCCT...GTCTGCTTGCACAGGACTGTGTTGCAGGACTGTGTTGCAGGATGGCCAGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR TCA 90 bp GTAGAGTCGGGCTTGGCTCTGGCCCTCCTGAAGCACGAGGCATCACCTGCTGGGCCCAGCACCTTCTCCTaGCAAAATCCTTCATGGTTT +
Preference number: 4 (lower is better)
Translates to: VESGLALALLKHEASPAGPSTFS*QNPSWF
Trigger: AAACCATGAAGGATTTTGTCAGGAGAAGGTGCTGGG...CCCAGCAGGTGATGCCTCGTGCTTCAGGAGGGCCAGAGCCAAGCCCGACTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp GACCCAGACAGTAGTTACCACGGCTCTTCCCCGCAGCATCCCTCACAGACTCAGCAGAGGATGATCATCTaGCCCGTACGGCTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: DPDSSYHGSSPQHPSQTQQRMII*PVRLLH
Trigger: ATGGAGGAGCCGTACGGGGCAGATGATCATCCTCTG...CTGAGTCTGTGAGGGATGCTGCGGGGAAGAGCCGTGGTAACTACTGTCTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp GTAGAGTCGGGCTTGGCTCTGGCCCTCCTGAAGCACGAGGCATCACCTGCTGGGCCAGTAACTTCCTTTTaGGTTGTTCCTGCAGACTCC +
Preference number: 4 (lower is better)
Translates to: VESGLALALLKHEASPAGPVTSF*VVPADS
Trigger: GGAGTCTGCAGGAACAACCCAAAAGGAAGTTACTGG...CCCAGCAGGTGATGCCTCGTGCTTCAGGAGGGCCAGAGCCAAGCCCGACTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp GGTGCTCAGCTGAGAAACATGTGCAGAAGAACACAGAGGTCACGGCCGCTGGGGGCCCCACGTTCACCATaGTCATCTCTCCGACCATCT +
Preference number: 4 (lower is better)
Translates to: GAQLRNMCRRTQRSRPLGAPRSP*SSLRPS
Trigger: AGATGGTCGGAGAGATGACCATGGTGAACGTGGGGC...CCCCAGCGGCCGTGACCTCTGTGTTCTTCTGCACATGTTTCTCAGCTGAGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp GACCCAGACAGTAGTTACCACGGCTCTTCCCCGCAGCATCCCTCACAGACTCAGAGGCGGGGAAATCGCTaGCATACTGCCATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: DPDSSYHGSSPQHPSQTQRRGNR*HTAILP
Trigger: AGGAAGGATGGCAGTATGCCAGCGATTTCCCCGCCT...CTGAGTCTGTGAGGGATGCTGCGGGGAAGAGCCGTGGTAACTACTGTCTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp CAGACCTGGCCATCCTGCAACACAGTCCTGCAACACAGTCCTGTGCAAGCAGACGATAGCAGGCTCCGATaGAGACAGAGGCGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: QTWPSCNTVLQHSPVQADDSRLR*RQRRRA
Trigger: AGCCCTTCGCCTCTGTCTCCATCGGAGCCTGCTATC...GTCTGCTTGCACAGGACTGTGTTGCAGGACTGTGTTGCAGGATGGCCAGGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp TTTGCCAGTGCTGCAGAAATGGCTGACTCTGACCTGACTCCTTGGGTGTGGGGCGTGTCAGCTTCTGCTTaGGAGGGGAGGGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: FASAAEMADSDLTPWVWGVSASA*EGRGCG
Trigger: ACCACATCCCCTCCCCTCCCAAGCAGAAGCTGACAC...GCCCCACACCCAAGGAGTCAGGTCAGAGTCAGCCATTTCTGCAGCACTGGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp GAGGGCTCTGAGTTCCTGGCCTGGAAAGATGGGAGGTATTGCAGGCAGGGACCGTCCCCTGGACTTTGTTaGCAATCACCCAGACCTGGT +
Preference number: 4 (lower is better)
Translates to: EGSEFLAWKDGRYCRQGPSPGLC*QSPRPG
Trigger: ACCAGGTCTGGGTGATTGCCAACAAAGTCCAGGGGA...CGGTCCCTGCCTGCAATACCTCCCATCTTTCCAGGCCAGGAACTCAGAGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR TCA 90 bp CATCACCTGCTGGGGCACACATTTGCCATGGGCCAGTCCCTCTCCACAGGACACGCTTGGTCCTTTCTGTaGGTTGCTGGAAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: HHLLGHTFAMGQSLSTGHAWSFL*VAGRSA
Trigger: AGCAGATCTTCCAGCAACTCACAGAAAGGACCAAGC...GTGTCCTGTGGAGAGGGACTGGCCCATGGCAAATGTGTGCCCCAGCAGGTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR TCA 90 bp TGTGCAGAAGAACACAGAGGTCACGGCCGCTGGGGACAGACCCAGATGCCCCCTGGACCACATAATAGATaGAGAGGATGCTGTCTCGAG +
Preference number: 4 (lower is better)
Translates to: CAEEHRGHGRWGQTQMPPGPHNR*RGCCLE
Trigger: CTCGAGACAGCATCCTCTTCATCTATTATGTGGTCC...AGGGGGCATCTGGGTCTGTCCCCAGCGGCCGTGACCTCTGTGTTCTTCTGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp TGTGCAGAAGAACACAGAGGTCACGGCCGCTGGGGACAGACCCAGATGCCCCCTGTCCTTTCTGTGAGTTaGTGGAAGATCTGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: CAEEHRGHGRWGQTQMPPVLSVS*WKICFL
Trigger: GAGGAAGCAGATCTTCCAGCAACTCACAGAAAGGAC...AGGGGGCATCTGGGTCTGTCCCCAGCGGCCGTGACCTCTGTGTTCTTCTGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp GAGGGCTCTGAGTTCCTGGCCTGGAAAGATGGGAGGTATTGCAGGCAGGGACCGCATAGTGCAACATTGTaGCCTCTCCCGTCAGCATGT +
Preference number: 4 (lower is better)
Translates to: EGSEFLAWKDGRYCRQGPHSATL*PLPSAC
Trigger: ACATGCTGACGGGAGAGGGCACAATGTTGCACTATG...CGGTCCCTGCCTGCAATACCTCCCATCTTTCCAGGCCAGGAACTCAGAGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp ACCTCTGGAAATTCGGAGGACATGGAGCCACTCATGTCCTTGGGATGGGACCCCCTTCCAGGTCTGGGCTaGGCTCGCTCACAAAGATGT +
Preference number: 4 (lower is better)
Translates to: TSGNSEDMEPLMSLGWDPLPGLG*ARSQRC
Trigger: ACATCTTTGTGAGCGAGCCCAGCCCAGACCTGGAAG...GGGGTCCCATCCCAAGGACATGAGTGGCTCCATGTCCTCCGAATTTCCAGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp CTGTCCAGGACATCAAACGGGGAGGATTCTGGGACAAACCAGTTAGGGCTCTGTGGACCCTGGTGGCATTaGCCCGGACAGAGATGTGGT +
Preference number: 4 (lower is better)
Translates to: LSRTSNGEDSGTNQLGLCGPWWH*PGQRCG
Trigger: ACCACATCTCTGTCCGGGCCAATGCCACCAGGGTCC...ACAGAGCCCTAACTGGTTTGTCCCAGAATCCTCCCCGTTTGATGTCCTGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR TCA 90 bp TGTGCAGAAGAACACAGAGGTCACGGCCGCTGGGGACAGACCCAGATGCCCCCTCCTCCTTCGCACACATaGATTCCATTTCTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: CAEEHRGHGRWGQTQMPPPPSHT*IPFLVS
Trigger: AGAGACAAGAAATGGAATTCATGTGTGCGAAGGAGG...AGGGGGCATCTGGGTCTGTCCCCAGCGGCCGTGACCTCTGTGTTCTTCTGCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR TCA 90 bp CACAAGAAAGATTTCAGTTCTGGTTCTGCAGGCTCAGACCATCCTTGCCTCCAGCGTCTTCACCCACACTaGCTGCTCCACGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: HKKDFSSGSAGSDHPCLQRLHPH*LLHGLL
Trigger: GAGCAGGCCGTGGAGCAGTCAGTGTGGGTGAAGACG...CTGGAGGCAAGGATGGTCTGAGCCTGCAGAACCAGAACTGAAATCTTTCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp ACCTCTGGAAATTCGGAGGACATGGAGCCACTCATGTCCTTGGGATGGGACCCCCAGGAGCCTTTTCTTTaGCTTCAGTCAGGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: TSGNSEDMEPLMSLGWDPQEPFL*LQSGRR
Trigger: ACGCCTGCCTGACTGAAGGCAAAGAAAAGGCTCCTG...GGGGTCCCATCCCAAGGACATGAGTGGCTCCATGTCCTCCGAATTTCCAGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp GTCCTGGGTAGTCTCAAACTCACGATCCTCCTGCCTCAGTTTCCTGAGTGCAGGCAGTCATTCATGTCTTaGTCTGTGGCGGCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VLGSLKLTILLPQFPECRQSFMS*SVAAAR
Trigger: CCTGGCTGCCGCCACAGAGCAAGACATGAATGACTG...CCTGCACTCAGGAAACTGAGGCAGGAGGATCGTGAGTTTGAGACTACCCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp GACCCAGACAGTAGTTACCACGGCTCTTCCCCGCAGCATCCCTCACAGACTCAGTGTAAATGTTGCTGGTaGTACTGGCCAGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: DPDSSYHGSSPQHPSQTQCKCCW*YWPGLG
Trigger: TCCAAGGCCTGGCCAGTAGCACCAGCAACATTTACA...CTGAGTCTGTGAGGGATGCTGCGGGGAAGAGCCGTGGTAACTACTGTCTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp CCTGGCCATCCTGCAACACAGTCCTGCAACACAGTCCTGTGCAAGCAGACCCTGACTGTGTGTAAATGTTaGTGGTGCTACTGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PGHPATQSCNTVLCKQTLTVCKC*WCYWPG
Trigger: GCCTGGCCAGTAGCACCAGCAACATTTACACACAGT...CAGGGTCTGCTTGCACAGGACTGTGTTGCAGGACTGTGTTGCAGGATGGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp ACCTCTGGAAATTCGGAGGACATGGAGCCACTCATGTCCTTGGGATGGGACCCCACATTGTTGGATACATaGTCCCAGCTGGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: TSGNSEDMEPLMSLGWDPTLLDT*SQLEPC
Trigger: GCAGGGCTCCAGCTGGGAGCATGTATCCAACAATGT...GGGGTCCCATCCCAAGGACATGAGTGGCTCCATGTCCTCCGAATTTCCAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp GCCTCTCTGCACGTGGGTGTGTCTGCTCTCACCTCTGGAAATTCGGAGGACATGCCTTTAGGTCAATGTTaGTCCAGGGCAGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: ASLHVGVSALTSGNSEDMPLGQC*SRAAQL
Trigger: CAGCTGAGCTGCCCTGGACCAACATTGACCTAAAGG...CATGTCCTCCGAATTTCCAGAGGTGAGAGCAGACACACCCACGTGCAGAGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp CTGTCCAGGACATCAAACGGGGAGGATTCTGGGACAAACCAGTTAGGGCTCTGTACGTCCACCCACTTGTaGGGCTTCCAGTCACACCAC +
Preference number: 4 (lower is better)
Translates to: LSRTSNGEDSGTNQLGLCTSTHL*GFQSHH
Trigger: GTGGTGTGACTGGAAGCCCCACAAGTGGGTGGACGT...ACAGAGCCCTAACTGGTTTGTCCCAGAATCCTCCCCGTTTGATGTCCTGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp GACCCAGACAGTAGTTACCACGGCTCTTCCCCGCAGCATCCCTCACAGACTCAGGTGTGTAAATGTTGCTaGTGCTACTGGCCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: DPDSSYHGSSPQHPSQTQVCKCC*CYWPGL
Trigger: AAGGCCTGGCCAGTAGCACCAGCAACATTTACACAC...CTGAGTCTGTGAGGGATGCTGCGGGGAAGAGCCGTGGTAACTACTGTCTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp CACAAGAAAGATTTCAGTTCTGGTTCTGCAGGCTCAGACCATCCTTGCCTCCAGGCCCGGACAGAGATGTaGTCCCAGCCTCCGCCAATG +
Preference number: 4 (lower is better)
Translates to: HKKDFSSGSAGSDHPCLQARTEM*SQPPPM
Trigger: CATTGGCGGAGGCTGGGACCACATCTCTGTCCGGGC...CTGGAGGCAAGGATGGTCTGAGCCTGCAGAACCAGAACTGAAATCTTTCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp CTGTCCAGGACATCAAACGGGGAGGATTCTGGGACAAACCAGTTAGGGCTCTGTTCTATGATCCGCAAGTaGCCTCCCATCTGTCGCCAG +
Preference number: 4 (lower is better)
Translates to: LSRTSNGEDSGTNQLGLCSMIRK*PPICRQ
Trigger: CTGGCGACAGATGGGAGGCCACTTGCGGATCATAGA...ACAGAGCCCTAACTGGTTTGTCCCAGAATCCTCCCCGTTTGATGTCCTGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp GTCCTGGGTAGTCTCAAACTCACGATCCTCCTGCCTCAGTTTCCTGAGTGCAGGCCAATTGGACATCCTTaGAAAGCTCCCAGTACTGAC +
Preference number: 4 (lower is better)
Translates to: VLGSLKLTILLPQFPECRPIGHP*KAPSTD
Trigger: GTCAGTACTGGGAGCTTTGCAAGGATGTCCAATTGG...CCTGCACTCAGGAAACTGAGGCAGGAGGATCGTGAGTTTGAGACTACCCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp CACAAGAAAGATTTCAGTTCTGGTTCTGCAGGCTCAGACCATCCTTGCCTCCAGCACTGGTCACCAGCTTaGATTTTCTGGCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: HKKDFSSGSAGSDHPCLQHWSPA*IFWPST
Trigger: GGTGCTGGGCCAGAAAATGCAAGCTGGTGACCAGTG...CTGGAGGCAAGGATGGTCTGAGCCTGCAGAACCAGAACTGAAATCTTTCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp CACAAGAAAGATTTCAGTTCTGGTTCTGCAGGCTCAGACCATCCTTGCCTCCAGTGTCCAAAGCTTCTTTaGGGAGAGGCTGTTCGGGGC +
Preference number: 4 (lower is better)
Translates to: HKKDFSSGSAGSDHPCLQCPKLL*GEAVRG
Trigger: GCCCCGAACAGCCTCTCCCCAAAGAAGCTTTGGACA...CTGGAGGCAAGGATGGTCTGAGCCTGCAGAACCAGAACTGAAATCTTTCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR GCA 90 bp GCCTCTCTGCACGTGGGTGTGTCTGCTCTCACCTCTGGAAATTCGGAGGACATGGTCCCACAGACACTTTaGGTACATTGTTGGATACAT +
Preference number: 4 (lower is better)
Translates to: ASLHVGVSALTSGNSEDMVPQTL*VHCWIH
Trigger: ATGTATCCAACAATGTACGCAAAGTGTCTGTGGGAC...CATGTCCTCCGAATTTCCAGAGGTGAGAGCAGACACACCCACGTGCAGAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CCA 90 bp CACAAGAAAGATTTCAGTTCTGGTTCTGCAGGCTCAGACCATCCTTGCCTCCAGCTTTCTGTGAGTTGCTaGAAGATCTGCTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: HKKDFSSGSAGSDHPCLQLSVSC*KICFLQ
Trigger: CTGGAGGAAGCAGATCTTCCAGCAACTCACAGAAAG...CTGGAGGCAAGGATGGTCTGAGCCTGCAGAACCAGAACTGAAATCTTTCTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 90 bp CATAGTCCCAGCCCTGTCCCTTGGGCTCCCGAGGCTGGACACCCATaGGACGACACACCGTCCCCCGGCTCAGGCCATGGCTCCCCTGGA +
Preference number: 5 (lower is better)
Translates to: HSPSPVPWAPEAGHP*DDTPSPGSGHGSPG
Trigger: TCCAGGGGAGCCATGGCCTGAGCCGGGGGACGGTGTGTCGTCGCATGGGTGTCCAGCCTCGGGAGCCCAAGGGACAGGGCTGGGACTATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 90 bp TGTGGTCCCAGCCTCCGCCAATGCCATAGTCCCAGCCCTGTCCCTTaGGCTCCCGAGGCTGGACACCCATGCGACGACACACCGTCCCCC +
Preference number: 5 (lower is better)
Translates to: CGPSLRQCHSPSPVP*APEAGHPCDDTPSP
Trigger: GGGGGACGGTGTGTCGTCGCATGGGTGTCCAGCCTCGGGAGCCCAAGGGACAGGGCTGGGACTATGGCATTGGCGGAGGCTGGGACCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 90 bp CATTCCCAGTGTGGCGAAGGCAGTGCTACCCCATCCAGCGGCCGATaGTGGAGCCCACTCACGTCACTCCATGGCCAGCGGTCGCTCGGC +
Preference number: 5 (lower is better)
Translates to: HSQCGEGSATPSSGR*WSPLTSLHGQRSLG
Trigger: GCCGAGCGACCGCTGGCCATGGAGTGACGTGAGTGGGCTCCAGCATCGGCCGCTGGATGGGGTAGCACTGCCTTCGCCACACTGGGAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 90 bp GACCGCGGGCCTCCCGATCCCTGGACATGTTCCTTGGGACCCTGGTaGCATTGGCCCGGACAGAGATGTGGTCCCAGCCTCCGCCAATGC +
Preference number: 5 (lower is better)
Translates to: DRGPPDPWTCSLGPW*HWPGQRCGPSLRQC
Trigger: GCATTGGCGGAGGCTGGGACCACATCTCTGTCCGGGCCAATGCCACCAGGGTCCCAAGGAACATGTCCAGGGATCGGGAGGCCCGCGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 90 bp ACACGGACGTCCACCCACTTGTGGGGCTTCCAGTCACACCACCACTaGAGGGCCCCCGTCTTCACCCACACTGACTGCTCCACGGCCTGC +
Preference number: 5 (lower is better)
Translates to: TRTSTHLWGFQSHHH*RAPVFTHTDCSTAC
Trigger: GCAGGCCGTGGAGCAGTCAGTGTGGGTGAAGACGGGGGCCCTGCAGTGGTGGTGTGACTGGAAGCCCCACAAGTGGGTGGACGTCCGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 90 bp TGCCCTGTGAACTGCTCCAGGGCCACACGGACGTCCACCCACTTGTaGGGCTTCCAGTCACACCACCACTGCAGGGCCCCCGTCTTCACC +
Preference number: 5 (lower is better)
Translates to: CPVNCSRATRTSTHL*GFQSHHHCRAPVFT
Trigger: GGTGAAGACGGGGGCCCTGCAGTGGTGGTGTGACTGGAAGCCCCACAAGTGGGTGGACGTCCGTGTGGCCCTGGAGCAGTTCACAGGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 90 bp GGCTGGACACCCATGCGACGACACACCGTCCCCCGGCTCAGGCCATaGCTCCCCTGGACTTTGTTGGCAATCACCCAGACCTGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: GWTPMRRHTVPRLRP*LPWTLLAITQTWSR
Trigger: CCTGGACCAGGTCTGGGTGATTGCCAACAAAGTCCAGGGGAGCCATGGCCTGAGCCGGGGGACGGTGTGTCGTCGCATGGGTGTCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 90 bp AACAGGACCTGGACCGCGGGCCTCCCGATCCCTGGACATGTTCCTTaGGACCCTGGTGGCATTGGCCCGGACAGAGATGTGGTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: NRTWTAGLPIPGHVP*DPGGIGPDRDVVPA
Trigger: GGCTGGGACCACATCTCTGTCCGGGCCAATGCCACCAGGGTCCCAAGGAACATGTCCAGGGATCGGGAGGCCCGCGGTCCAGGTCCTGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 90 bp GCCTCCACTGCACATGCGCCTCCAGACACCCAGGCCCACAGAGGATaGTCATCTGCCCCGTACGGCTCCTCCATGCCCATCGGGAAGAGC +
Preference number: 5 (lower is better)
Translates to: ASTAHAPPDTQAHRG*SSAPYGSSMPIGKS
Trigger: GCTCTTCCCGATGGGCATGGAGGAGCCGTACGGGGCAGATGATCATCCTCTGTGGGCCTGGGTGTCTGGAGGCGCATGTGCAGTGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 90 bp TGCACATGCGCCTCCAGACACCCAGGCCCACAGAGGATGATCATCTaGCCCGTACGGCTCCTCCATGCCCATCGGGAAGAGCCCCAGGGA +
Preference number: 5 (lower is better)
Translates to: CTCASRHPGPQRMII*PVRLLHAHREEPQG
Trigger: TCCCTGGGGCTCTTCCCGATGGGCATGGAGGAGCCGTACGGGGCAGATGATCATCCTCTGTGGGCCTGGGTGTCTGGAGGCGCATGTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 90 bp CAGGCTCCGATGGAGACAGAGGCGAAGGGCTGGTCAGTGCCAACATaGAGCCAGGAGGAGCCCGCGGGGTTGAGTTCAGACACACCCAGG +
Preference number: 5 (lower is better)
Translates to: QAPMETEAKGWSVPT*SQEEPAGLSSDTPR
Trigger: CCTGGGTGTGTCTGAACTCAACCCCGCGGGCTCCTCCTGGCTGCATGTTGGCACTGACCAGCCCTTCGCCTCTGTCTCCATCGGAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 90 bp TACCCCATCCAGCGGCCGATGCTGGAGCCCACTCACGTCACTCCATaGCCAGCGGTCGCTCGGCAGGAGCTTCTCACAGAAGCCTCCCAT +
Preference number: 5 (lower is better)
Translates to: YPIQRPMLEPTHVTP*PAVARQELLTEASH
Trigger: ATGGGAGGCTTCTGTGAGAAGCTCCTGCCGAGCGACCGCTGGCCATGGAGTGACGTGAGTGGGCTCCAGCATCGGCCGCTGGATGGGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp CTCACGATCCTCCTGCCTCAGTTTCCTGAGTGCAGGGCCTATGGGCATCCAGCCTCCCAGCCCTGTCCCTaGGGCTCCCGAGGCTGGACA +
Preference number: 5 (lower is better)
Translates to: LTILLPQFPECRAYGHPASQPCP*GSRGWT
Trigger: TGTCCAGCCTCGGGAGCCCAAGGGACAGGGCTGGGA...GGCTGGATGCCCATAGGCCCTGCACTCAGGAAACTGAGGCAGGAGGATCGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp GTAGAGTCGGGCTTGGCTCTGGCCCTCCTGAAGCACGAGGCATCACCTGCTGGGGAGGAGCCTTCTGGGTaGGGGTGGCTGACATCCTCT +
Preference number: 5 (lower is better)
Translates to: VESGLALALLKHEASPAGEEPSG*GWLTSS
Trigger: AGAGGATGTCAGCCACCCCAACCCAGAAGGCTCCTC...CCCAGCAGGTGATGCCTCGTGCTTCAGGAGGGCCAGAGCCAAGCCCGACTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp AGAACACAGAGGTCACGGCCGCTGGGGACAGACCCAGATGCCCCCTTGGGACCCCTCTCCAGCTCCCGCTaGGTCCTTTCTGTGAGTTGC +
Preference number: 5 (lower is better)
Translates to: RTQRSRPLGTDPDAPLGPLSSSR*VLSVSC
Trigger: GCAACTCACAGAAAGGACCAAGCGGGAGCTGGAGAG...GGGTCCCAAGGGGGCATCTGGGTCTGTCCCCAGCGGCCGTGACCTCTGTGTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp TGCTCAGCAGTGAGAGGGTACGTCACCCTGGTGACACCCTGGCGGTGCTCAGCTGCTACTGGCCAGGCCTaGGAAGCAACCGCCGCCATA +
Preference number: 5 (lower is better)
Translates to: CSAVRGYVTLVTPWRCSAATGQA*EATAAI
Trigger: TATGGCGGCGGTTGCTTCCAAGGCCTGGCCAGTAGC...AGCTGAGCACCGCCAGGGTGTCACCAGGGTGACGTACCCTCTCACTGCTGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp TATTGCAGGCAGGGACCGGGGCTGAGGGACCCAGACAGTAGTTACCACGGCTCTGGGACCCTGGTGGCATaGGCCCGGACAGAGATGTGG +
Preference number: 5 (lower is better)
Translates to: YCRQGPGLRDPDSSYHGSGTLVA*ARTEMW
Trigger: CCACATCTCTGTCCGGGCCAATGCCACCAGGGTCCC...AGAGCCGTGGTAACTACTGTCTGGGTCCCTCAGCCCCGGTCCCTGCCTGCAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 90 bp ATGCCCCATACCACGCCTCGGCTGTTGGCCTCTATGATCCGCAAGTaGCCTCCCATCTGTCGCCAGAACATCTGGTCGCAGGGCAGCAGG +
Preference number: 5 (lower is better)
Translates to: MPHTTPRLLASMIRK*PPICRQNIWSQGSR
Trigger: CCTGCTGCCCTGCGACCAGATGTTCTGGCGACAGATGGGAGGCCACTTGCGGATCATAGAGGCCAACAGCCGAGGCGTGGTATGGGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp CTCACGATCCTCCTGCCTCAGTTTCCTGAGTGCAGGGCCTATGGGCATCCAGCCCGGACGTCCACCCACTaGTGGGGCTTCCAGTCACAC +
Preference number: 5 (lower is better)
Translates to: LTILLPQFPECRAYGHPARTSTH*WGFQSH
Trigger: GTGTGACTGGAAGCCCCACAAGTGGGTGGACGTCCG...GGCTGGATGCCCATAGGCCCTGCACTCAGGAAACTGAGGCAGGAGGATCGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp GTAGAGTCGGGCTTGGCTCTGGCCCTCCTGAAGCACGAGGCATCACCTGCTGGGCCACTGGTCACCAGCTaGCATTTTCTGGCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: VESGLALALLKHEASPAGPLVTS*HFLAQH
Trigger: GTGCTGGGCCAGAAAATGCAAGCTGGTGACCAGTGG...CCCAGCAGGTGATGCCTCGTGCTTCAGGAGGGCCAGAGCCAAGCCCGACTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 90 bp GGGTTTCCACGAGAGACCAGGAGGAGCCTTCTGGGTTGGGGTGGCTaGCATCCTCTCGGTACCACACCTTTCCCTGCAGGGATACAGCCC +
Preference number: 5 (lower is better)
Translates to: GFPRETRRSLLGWGG*HPLGTTPFPAGIQP
Trigger: GGGCTGTATCCCTGCAGGGAAAGGTGTGGTACCGAGAGGATGTCAGCCACCCCAACCCAGAAGGCTCCTCCTGGTCTCTCGTGGAAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 90 bp GGTCACTTTCTCGGCCCACGACAATGGCCTTCCATGTCTTCCCGCTaGGCTCGCTGGGAGTCACACCCTGCCGGAAGTATACGGCTCGGT +
Preference number: 5 (lower is better)
Translates to: GHFLGPRQWPSMSSR*ARWESHPAGSIRLG
Trigger: ACCGAGCCGTATACTTCCGGCAGGGTGTGACTCCCAGCGAGCTCAGCGGGAAGACATGGAAGGCCATTGTCGTGGGCCGAGAAAGTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 90 bp CGGTCCTTCGTGATGGCCCAGACCACACTGACGCCCGCGGAGACGTaGATGATACCGTTTTCAGATCCAGGAGGCTCCACCATGGACCAG +
Preference number: 5 (lower is better)
Translates to: RSFVMAQTTLTPAET*MIPFSDPGGSTMDQ
Trigger: CTGGTCCATGGTGGAGCCTCCTGGATCTGAAAACGGTATCATGCACGTCTCCGCGGGCGTCAGTGTGGTCTGGGCCATCACGAAGGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 90 bp ATGGCCTTCCATGTCTTCCCGCTGAGCTCGCTGGGAGTCACACCCTaGCGGAAGTATACGGCTCGGTCCTCACAGCTGATACCCCAGACC +
Preference number: 5 (lower is better)
Translates to: MAFHVFPLSSLGVTP*RKYTARSSQLIPQT
Trigger: GGTCTGGGGTATCAGCTGTGAGGACCGAGCCGTATACTTCCGGCAGGGTGTGACTCCCAGCGAGCTCAGCGGGAAGACATGGAAGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 90 bp GGGGCCCTGTCTCTCAACTTCCAAGGAGGCATCGGTATCACTGGGTaGCGACTCTGTACCACTGCCCCTCACCTCGTCGCCGAAGAAGCA +
Preference number: 5 (lower is better)
Translates to: GALSLNFQGGIGITG*RLCTTAPHLVAEEA
Trigger: TGCTTCTTCGGCGACGAGGTGAGGGGCAGTGGTACAGAGTCGGCACCCAGTGATACCGATGCCTCCTTGGAAGTTGAGAGACAGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 90 bp TCGCTCACAAAGATGTCACCCTTGCAAGTGACAGACCAGATGGCCTaGGGGGATGGGCGTCCATGGACCTTCCGGCTCTCGCAGCAGGAC +
Preference number: 5 (lower is better)
Translates to: SLTKMSPLQVTDQMA*GDGRPWTFRLSQQD
Trigger: GTCCTGCTGCGAGAGCCGGAAGGTCCATGGACGCCCATCCCCGCAGGCCATCTGGTCTGTCACTTGCAAGGGTGACATCTTTGTGAGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 90 bp GTTCGGGGCCCTGTCTCTCAACTTCCAAGGAGGCATCGGTATCACTaGGTGCCGACTCTGTACCACTGCCCCTCACCTCGTCGCCGAAGA +
Preference number: 5 (lower is better)
Translates to: VRGPVSQLPRRHRYH*VPTLYHCPSPRRRR
Trigger: TCTTCGGCGACGAGGTGAGGGGCAGTGGTACAGAGTCGGCACCCAGTGATACCGATGCCTCCTTGGAAGTTGAGAGACAGGGCCCCGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 90 bp TGGGCTCCTTTAGGTCAATGTTGGTCCAGGGCAGCTCAGCTGGCGTaGAGGCAGGGCCGCGGCATTCATCAGAACGAGAGGTCTCAGGAG +
Preference number: 5 (lower is better)
Translates to: WAPLGQCWSRAAQLA*RQGRGIHQNERSQE
Trigger: CTCCTGAGACCTCTCGTTCTGATGAATGCCGCGGCCCTGCCTCCACGCCAGCTGAGCTGCCCTGGACCAACATTGACCTAAAGGAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp CTCACGATCCTCCTGCCTCAGTTTCCTGAGTGCAGGGCCTATGGGCATCCAGCCCACAGGACGTCCCCCTaGTCACTGACGGCCCATAGT +
Preference number: 5 (lower is better)
Translates to: LTILLPQFPECRAYGHPAHRTSP*SLTAHS
Trigger: ACTATGGGCCGTCAGTGACAAGGGGGACGTCCTGTG...GGCTGGATGCCCATAGGCCCTGCACTCAGGAAACTGAGGCAGGAGGATCGTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 90 bp CTGGATGGTGAACCACTTAAGTGTAGAGCCCGCCTCCACTGCACATaGGCCTCCAGACACCCAGGCCCACAGAGGATGATCATCTGCCCC +
Preference number: 5 (lower is better)
Translates to: LDGEPLKCRARLHCT*ASRHPGPQRMIICP
Trigger: GGGGCAGATGATCATCCTCTGTGGGCCTGGGTGTCTGGAGGCGCATGTGCAGTGGAGGCGGGCTCTACACTTAAGTGGTTCACCATCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 90 bp CCTGGGGTTTCCACGAGAGACCAGGAGGAGCCTTCTGGGTTGGGGTaGCTGACATCCTCTCGGTACCACACCTTTCCCTGCAGGGATACA +
Preference number: 5 (lower is better)
Translates to: PGVSTRDQEEPSGLG*LTSSRYHTFPCRDT
Trigger: TGTATCCCTGCAGGGAAAGGTGTGGTACCGAGAGGATGTCAGCCACCCCAACCCAGAAGGCTCCTCCTGGTCTCTCGTGGAAACCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 90 bp CATAAACGGATGTCTGGCCCACAGACACCTGTGTCAGCTTCTGCTTaGGAGGGGAGGGGATGTGGTACCAGCAGTCACCAGCTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: HKRMSGPQTPVSASA*EGRGCGTSSHQLAG
Trigger: CCCAGCCAGCTGGTGACTGCTGGTACCACATCCCCTCCCCTCCCAAGCAGAAGCTGACACAGGTGTCTGTGGGCCAGACATCCGTTTATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp CACAGTCCTGCAACACAGTCCTGTGCAAGCAGACCCTGCCCCCTTCCTGAAGGACCTTGGGGTCATCCTTaGAGGGGATCTTGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: HSPATQSCASRPCPLPEGPWGHP*RGSWPR
Trigger: CCTGGGCCAAGATCCCCTCAAAGGATGACCCCAAGG...TCCTTCAGGAAGGGGGCAGGGTCTGCTTGCACAGGACTGTGTTGCAGGACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp CATCACCTGCTGGGGCACACATTTGCCATGGGCCAGTCCCTCTCCACAGGACACGGATCAGGGAGTTCCTaGGGGTCATCCTTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: HHLLGHTFAMGQSLSTGHGSGSS*GSSFEG
Trigger: CCCCTCAAAGGATGACCCCAAGGAACTCCCTGATCC...GTGTCCTGTGGAGAGGGACTGGCCCATGGCAAATGTGTGCCCCAGCAGGTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp CCTGGCCATCCTGCAACACAGTCCTGCAACACAGTCCTGTGCAAGCAGACCCTGTGTGTCAGCTTCTGCTaGGGAGGGGAGGGGATGTGG +
Preference number: 5 (lower is better)
Translates to: PGHPATQSCNTVLCKQTLCVSFC*GGEGMW
Trigger: CCACATCCCCTCCCCTCCCAAGCAGAAGCTGACACA...CAGGGTCTGCTTGCACAGGACTGTGTTGCAGGACTGTGTTGCAGGATGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp CACAGTCCTGCAACACAGTCCTGTGCAAGCAGACCCTGCCCCCTTCCTGAAGGACCCTGGACATGTTCCTaGGGACCCTGGTGGCATTGG +
Preference number: 5 (lower is better)
Translates to: HSPATQSCASRPCPLPEGPWTCS*GPWWHW
Trigger: CCAATGCCACCAGGGTCCCAAGGAACATGTCCAGGG...TCCTTCAGGAAGGGGGCAGGGTCTGCTTGCACAGGACTGTGTTGCAGGACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 90 bp GTCATCTCTCCGACCATCTCGATCCAGCTGGTGCCACAGGGGTTGTaGGAGTTGACACCCCTCCGGAACCACACTTTGCGGTCCTTCGTG +
Preference number: 5 (lower is better)
Translates to: VISPTISIQLVPQGL*ELTPLRNHTLRSFV
Trigger: CACGAAGGACCGCAAAGTGTGGTTCCGGAGGGGTGTCAACTCTCACAACCCCTGTGGCACCAGCTGGATCGAGATGGTCGGAGAGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 90 bp GGAGCCTTTTCTTTGCCTTCAGTCAGGCAGGCGTTCTCCGTGGAGTaGTCAGTGTTCCCGCTGGTCTCGTGGCCCTTGGACAAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: GAFSLPSVRQAFSVE*SVFPLVSWPLDKLP
Trigger: AGGGAGCTTGTCCAAGGGCCACGAGACCAGCGGGAACACTGATCACTCCACGGAGAACGCCTGCCTGACTGAAGGCAAAGAAAAGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 90 bp GATCATAGCCAATGCCCCATACCACGCCTCGGCTGTTGGCCTCTATaGTCCGCAAGTGGCCTCCCATCTGTCGCCAGAACATCTGGTCGC +
Preference number: 5 (lower is better)
Translates to: DHSQCPIPRLGCWPL*SASGLPSVARTSGR
Trigger: GCGACCAGATGTTCTGGCGACAGATGGGAGGCCACTTGCGGATCATAGAGGCCAACAGCCGAGGCGTGGTATGGGGCATTGGCTATGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 90 bp TGTTGGATACATGCTCCCAGCTGGAGCCCTGCGGGTAGCTGGGGGTaGTCCCTGCTCGGTACCACAGGTTCCCATTTTCGTCCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: CWIHAPSWSPAGSWG*SLLGTTGSHFRPRH
Trigger: ATGCCTTGGACGAAAATGGGAACCTGTGGTACCGAGCAGGGATCACCCCCAGCTACCCGCAGGGCTCCAGCTGGGAGCATGTATCCAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 90 bp CACAGGACGTCCCCCTTGTCACTGACGGCCCATAGTGCAACATTGTaGCCTCTCCCGTCAGCATGTGCACTCTCTGGGATGATGGACACG +
Preference number: 5 (lower is better)
Translates to: HRTSPLSLTAHSATL*PLPSACALSGMMDT
Trigger: CGTGTCCATCATCCCAGAGAGTGCACATGCTGACGGGAGAGGGCACAATGTTGCACTATGGGCCGTCAGTGACAAGGGGGACGTCCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 90 bp TACATGCTCCCAGCTGGAGCCCTGCGGGTAGCTGGGGGTGATCCCTaGTCGGTACCACAGGTTCCCATTTTCGTCCAAGGCATAAACGGA +
Preference number: 5 (lower is better)
Translates to: YMLPAGALRVAGGDP*SVPQVPIFVQGING
Trigger: TCCGTTTATGCCTTGGACGAAAATGGGAACCTGTGGTACCGAGCAGGGATCACCCCCAGCTACCCGCAGGGCTCCAGCTGGGAGCATGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp CAGACCTGGCCATCCTGCAACACAGTCCTGCAACACAGTCCTGTGCAAGCAGACTCCTTTGAGGGGATCTaGGCCCAGGAGTCCCGGGAT +
Preference number: 5 (lower is better)
Translates to: QTWPSCNTVLQHSPVQADSFEGI*AQESRD
Trigger: ATCCCGGGACTCCTGGGCCAAGATCCCCTCAAAGGA...GTCTGCTTGCACAGGACTGTGTTGCAGGACTGTGTTGCAGGATGGCCAGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp CCTGGCCATCCTGCAACACAGTCCTGCAACACAGTCCTGTGCAAGCAGACCCTGCCAGTCATTCATGTCTaGCTCTGTGGCGGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: PGHPATQSCNTVLCKQTLPVIHV*LCGGSQ
Trigger: CTGGCTGCCGCCACAGAGCAAGACATGAATGACTGG...CAGGGTCTGCTTGCACAGGACTGTGTTGCAGGACTGTGTTGCAGGATGGCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 90 bp CGCTGGCATACTGCCATCCTTCCTGATCGGTGCCTCCGGGGACACTaGAATCCACATACCAGTCAGAGACCCAAGTCCACTGCAGCGATG +
Preference number: 5 (lower is better)
Translates to: RWHTAILPDRCLRGH*NPHTSQRPKSTAAM
Trigger: CATCGCTGCAGTGGACTTGGGTCTCTGACTGGTATGTGGATTTCAGTGTCCCCGGAGGCACCGATCAGGAAGGATGGCAGTATGCCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 90 bp TGTTGGCAATCACCCAGACCTGGTCCAGGGGTCCCACAGACACTTTaGGTACATTGTTGGATACATGCTCCCAGCTGGAGCCCTGCGGGT +
Preference number: 5 (lower is better)
Translates to: CWQSPRPGPGVPQTL*VHCWIHAPSWSPAG
Trigger: ACCCGCAGGGCTCCAGCTGGGAGCATGTATCCAACAATGTACGCAAAGTGTCTGTGGGACCCCTGGACCAGGTCTGGGTGATTGCCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 90 bp GCTGATTCTCATAGGCCTCCTCTCGATGGCGGATGGGTACATCACTaGAGCACACATACAAGTAGACCTGGTTGTCGCCGGCGATGCCCC +
Preference number: 5 (lower is better)
Translates to: ADSHRPPLDGGWVHH*STHTSRPGCRRRCP
Trigger: GGGGCATCGCCGGCGACAACCAGGTCTACTTGTATGTGTGCTCCAGTGATGTACCCATCCGCCATCGAGAGGAGGCCTATGAGAATCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 90 bp GTGATGGACAGGGACAGCGTCTGCACTGAAGGGGACAGGCCTGACTaGATGGTGAACCACTTAAGTGTAGAGCCCGCCTCCACTGCACAT +
Preference number: 5 (lower is better)
Translates to: VMDRDSVCTEGDRPD*MVNHLSVEPASTAH
Trigger: ATGTGCAGTGGAGGCGGGCTCTACACTTAAGTGGTTCACCATCCAGTCAGGCCTGTCCCCTTCAGTGCAGACGCTGTCCCTGTCCATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp CATCACCTGCTGGGGCACACATTTGCCATGGGCCAGTCCCTCTCCACAGGACACTCCTTTAGGTCAATGTaGGTCCAGGGCAGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: HHLLGHTFAMGQSLSTGHSFRSM*VQGSSA
Trigger: AGCTGAGCTGCCCTGGACCAACATTGACCTAAAGGA...GTGTCCTGTGGAGAGGGACTGGCCCATGGCAAATGTGTGCCCCAGCAGGTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp GGTGCTCAGCTGAGAAACATGTGCAGAAGAACACAGAGGTCACGGCCGCTGGGGAGGGCAAAGGAGTGCTaGGCCTCATTAAGCACAGGG +
Preference number: 5 (lower is better)
Translates to: GAQLRNMCRRTQRSRPLGRAKEC*ASLSTG
Trigger: CCCTGTGCTTAATGAGGCCAAGCACTCCTTTGCCCT...CCCCAGCGGCCGTGACCTCTGTGTTCTTCTGCACATGTTTCTCAGCTGAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp GCCTCTCTGCACGTGGGTGTGTCTGCTCTCACCTCTGGAAATTCGGAGGACATGTGGCTCCCCTGGACTTaGTTGGCAATCACCCAGACC +
Preference number: 5 (lower is better)
Translates to: ASLHVGVSALTSGNSEDMWLPWT*LAITQT
Trigger: GGTCTGGGTGATTGCCAACAAAGTCCAGGGGAGCCA...CATGTCCTCCGAATTTCCAGAGGTGAGAGCAGACACACCCACGTGCAGAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 90 bp ACTCCAATTGGACATCCTTGCAAAGCTCCCAGTACTGACCGGCCGTaGACAGGGTATACACTCTCCCAAAGAGGTCCACCGCCCACAGCA +
Preference number: 5 (lower is better)
Translates to: TPIGHPCKAPSTDRP*TGYTLSQRGPPPTA
Trigger: TGCTGTGGGCGGTGGACCTCTTTGGGAGAGTGTATACCCTGTCCACGGCCGGTCAGTACTGGGAGCTTTGCAAGGATGTCCAATTGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp CTCTGCACGTGGGTGTGTCTGCTCTCACCTCTGGAAATTCGGAGGACATGGAGCTTGTCCAAAGCTTCTTaGGGGAGAGGCTGTTCGGGG +
Preference number: 5 (lower is better)
Translates to: LCTWVCLLSPLEIRRTWSLSKAS*GRGCSG
Trigger: CCCCGAACAGCCTCTCCCCAAAGAAGCTTTGGACAA...GCTCCATGTCCTCCGAATTTCCAGAGGTGAGAGCAGACACACCCACGTGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp GTCCTGGGTAGTCTCAAACTCACGATCCTCCTGCCTCAGTTTCCTGAGTGCAGGCTGGTCTCGTGGCCCTaGGACAAGCTCCCTTTAAGG +
Preference number: 5 (lower is better)
Translates to: VLGSLKLTILLPQFPECRLVSWP*DKLPLR
Trigger: CCTTAAAGGGAGCTTGTCCAAGGGCCACGAGACCAG...CCTGCACTCAGGAAACTGAGGCAGGAGGATCGTGAGTTTGAGACTACCCAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp TGTGCAGAAGAACACAGAGGTCACGGCCGCTGGGGACAGACCCAGATGCCCCCTTGGTTAGACACCTTCTaGGGCTCCTTTAGGTCAATG +
Preference number: 5 (lower is better)
Translates to: CAEEHRGHGRWGQTQMPPWLDTF*GSFRSM
Trigger: CATTGACCTAAAGGAGCCCAAGAAGGTGTCTAACCA...AGGGGGCATCTGGGTCTGTCCCCAGCGGCCGTGACCTCTGTGTTCTTCTGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp GTCCTGGGTAGTCTCAAACTCACGATCCTCCTGCCTCAGTTTCCTGAGTGCAGGCTCCCCTGGACTTTGTaGGCAATCACCCAGACCTGG +
Preference number: 5 (lower is better)
Translates to: VLGSLKLTILLPQFPECRLPWTL*AITQTW
Trigger: CCAGGTCTGGGTGATTGCCAACAAAGTCCAGGGGAG...CCTGCACTCAGGAAACTGAGGCAGGAGGATCGTGAGTTTGAGACTACCCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 90 bp AGACACTCTTCACATCTGACTGTGTGTAAATGTTGCTGGTGCTACTaGCCAGGCCTTGGAAGCAACCGCCGCCATAGCCGCCCGTGTACA +
Preference number: 5 (lower is better)
Translates to: RHSSHLTVCKCCWCY*PGLGSNRRHSRPCT
Trigger: TGTACACGGGCGGCTATGGCGGCGGTTGCTTCCAAGGCCTGGCCAGTAGCACCAGCAACATTTACACACAGTCAGATGTGAAGAGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 90 bp ACCCTCTTGAACTCCAATTGGACATCCTTGCAAAGCTCCCAGTACTaGCCGGCCGTGGACAGGGTATACACTCTCCCAAAGAGGTCCACC +
Preference number: 5 (lower is better)
Translates to: TLLNSNWTSLQSSQY*PAVDRVYTLPKRST
Trigger: GGTGGACCTCTTTGGGAGAGTGTATACCCTGTCCACGGCCGGTCAGTACTGGGAGCTTTGCAAGGATGTCCAATTGGAGTTCAAGAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 90 bp TGGGGTTCCAACGCTGATTCTCATAGGCCTCCTCTCGATGGCGGATaGGTACATCACTGGAGCACACATACAAGTAGACCTGGTTGTCGC +
Preference number: 5 (lower is better)
Translates to: WGSNADSHRPPLDGG*VHHWSTHTSRPGCR
Trigger: GCGACAACCAGGTCTACTTGTATGTGTGCTCCAGTGATGTACCCATCCGCCATCGAGAGGAGGCCTATGAGAATCAGCGTTGGAACCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS-3UTR CAA 90 bp GCCTCTCTGCACGTGGGTGTGTCTGCTCTCACCTCTGGAAATTCGGAGGACATGACCAGTAACTTCCTTTaGGGTTGTTCCTGCAGACTC +
Preference number: 5 (lower is better)
Translates to: ASLHVGVSALTSGNSEDMTSNFL*GCSCRL
Trigger: GAGTCTGCAGGAACAACCCAAAAGGAAGTTACTGGT...CATGTCCTCCGAATTTCCAGAGGTGAGAGCAGACACACCCACGTGCAGAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 90 bp GGATTTGTATCGCCTATACCGGATCCATTTCCTCCTTCGCACACATaGATTCCATTTCTTGTCTCTAGTGTAGGTGGCAGGAAAGTCCAT +
Preference number: 5 (lower is better)
Translates to: GFVSPIPDPFPPSHT*IPFLVSSVGGRKVH
Trigger: ATGGACTTTCCTGCCACCTACACTAGAGACAAGAAATGGAATTCATGTGTGCGAAGGAGGAAATGGATCCGGTATAGGCGATACAAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 72 bp AGCCCTGTCCCTTGGGCTCCCGAGGCTGGACACCCATaGGACGACACACCGTCCCCCGGCTCAGGCCATGGC +
Preference number: 6 (lower is better)
Translates to: SPVPWAPEAGHP*DDTPSPGSGHG
Trigger: GCCATGGCCTGAGCCGGGGGACGGTGTGTCGTCGCATGGGTGTCCAGCCTCGGGAGCCCAAGGGACAGGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 72 bp TGTGGCGAAGGCAGTGCTACCCCATCCAGCGGCCGATaGTGGAGCCCACTCACGTCACTCCATGGCCAGCGG +
Preference number: 6 (lower is better)
Translates to: CGEGSATPSSGR*WSPLTSLHGQR
Trigger: CCGCTGGCCATGGAGTGACGTGAGTGGGCTCCAGCATCGGCCGCTGGATGGGGTAGCACTGCCTTCGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp AACTGCTCCAGGGCCACACGGACGTCCACCCACTTGTaGGGCTTCCAGTCACACCACCACTGCAGGGCCCCC +
Preference number: 6 (lower is better)
Translates to: NCSRATRTSTHL*GFQSHHHCRAP
Trigger: GGGGGCCCTGCAGTGGTGGTGTGACTGGAAGCCCCACAAGTGGGTGGACGTCCGTGTGGCCCTGGAGCAGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp CAGCGGCCGATGCTGGAGCCCACTCACGTCACTCCATaGCCAGCGGTCGCTCGGCAGGAGCTTCTCACAGAA +
Preference number: 6 (lower is better)
Translates to: QRPMLEPTHVTP*PAVARQELLTE
Trigger: TTCTGTGAGAAGCTCCTGCCGAGCGACCGCTGGCCATGGAGTGACGTGAGTGGGCTCCAGCATCGGCCGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp GTGACAGACCAGATGGCCTGCGGGGATGGGCGTCCATaGACCTTCCGGCTCTCGCAGCAGGACAGGCTAAGC +
Preference number: 6 (lower is better)
Translates to: VTDQMACGDGRP*TFRLSQQDRLS
Trigger: GCTTAGCCTGTCCTGCTGCGAGAGCCGGAAGGTCCATGGACGCCCATCCCCGCAGGCCATCTGGTCTGTCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp GTCGCAGGGCAGCAGGCGCTCACGGGCTTCCAGGTCTaGGCTGGGCTCGCTCACAAAGATGTCACCCTTGCA +
Preference number: 6 (lower is better)
Translates to: VAGQQALTGFQV*AGLAHKDVTLA
Trigger: TGCAAGGGTGACATCTTTGTGAGCGAGCCCAGCCCAGACCTGGAAGCCCGTGAGCGCCTGCTGCCCTGCGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp CCCATGCGACGACACACCGTCCCCCGGCTCAGGCCATaGCTCCCCTGGACTTTGTTGGCAATCACCCAGACC +
Preference number: 6 (lower is better)
Translates to: PMRRHTVPRLRP*LPWTLLAITQT
Trigger: GGTCTGGGTGATTGCCAACAAAGTCCAGGGGAGCCATGGCCTGAGCCGGGGGACGGTGTGTCGTCGCATGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp AGCCTCCGCCAATGCCATAGTCCCAGCCCTGTCCCTTaGGCTCCCGAGGCTGGACACCCATGCGACGACACA +
Preference number: 6 (lower is better)
Translates to: SLRQCHSPSPVP*APEAGHPCDDT
Trigger: TGTGTCGTCGCATGGGTGTCCAGCCTCGGGAGCCCAAGGGACAGGGCTGGGACTATGGCATTGGCGGAGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp TGGACCGCGGGCCTCCCGATCCCTGGACATGTTCCTTaGGACCCTGGTGGCATTGGCCCGGACAGAGATGTG +
Preference number: 6 (lower is better)
Translates to: WTAGLPIPGHVP*DPGGIGPDRDV
Trigger: CACATCTCTGTCCGGGCCAATGCCACCAGGGTCCCAAGGAACATGTCCAGGGATCGGGAGGCCCGCGGTCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 72 bp CTGGACCGCGGGCCTCCCGATCCCTGGACATGTTCCTaGGGACCCTGGTGGCATTGGCCCGGACAGAGATGT +
Preference number: 6 (lower is better)
Translates to: LDRGPPDPWTCS*GPWWHWPGQRC
Trigger: ACATCTCTGTCCGGGCCAATGCCACCAGGGTCCCAAGGAACATGTCCAGGGATCGGGAGGCCCGCGGTCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 90 bp AAACAGGACCTGGACCGCGGGCCTCCCGATCCCTGGACATGTTCCTaGGGACCCTGGTGGCATTGGCCCGGACAGAGATGTGGTCCCAGC +
Preference number: 6 (lower is better)
Translates to: KQDLDRGPPDPWTCS*GPWWHWPGQRCGPS
Trigger: GCTGGGACCACATCTCTGTCCGGGCCAATGCCACCAGGGTCCCAAGGAACATGTCCAGGGATCGGGAGGCCCGCGGTCCAGGTCCTGTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 72 bp GCCTCCAGACACCCAGGCCCACAGAGGATGATCATCTaGCCCGTACGGCTCCTCCATGCCCATCGGGAAGAG +
Preference number: 6 (lower is better)
Translates to: ASRHPGPQRMII*PVRLLHAHREE
Trigger: CTCTTCCCGATGGGCATGGAGGAGCCGTACGGGGCAGATGATCATCCTCTGTGGGCCTGGGTGTCTGGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 72 bp TCCACCCACTTGTGGGGCTTCCAGTCACACCACCACTaGAGGGCCCCCGTCTTCACCCACACTGACTGCTCC +
Preference number: 6 (lower is better)
Translates to: STHLWGFQSHHH*RAPVFTHTDCS
Trigger: GGAGCAGTCAGTGTGGGTGAAGACGGGGGCCCTGCAGTGGTGGTGTGACTGGAAGCCCCACAAGTGGGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 72 bp GACAGGCTAAGCAGGGCGAGCCAGTCATTCATGTCTTaGTCTGTGGCGGCAGCCAGGCGTACGGGCCACCTC +
Preference number: 6 (lower is better)
Translates to: DRLSRASQSFMS*SVAAARRTGHL
Trigger: GAGGTGGCCCGTACGCCTGGCTGCCGCCACAGAGCAAGACATGAATGACTGGCTCGCCCTGCTTAGCCTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 72 bp CCAGCTGGAGCCCTGCGGGTAGCTGGGGGTGATCCCTaGTCGGTACCACAGGTTCCCATTTTCGTCCAAGGC +
Preference number: 6 (lower is better)
Translates to: PAGALRVAGGDP*SVPQVPIFVQG
Trigger: GCCTTGGACGAAAATGGGAACCTGTGGTACCGAGCAGGGATCACCCCCAGCTACCCGCAGGGCTCCAGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp CCTCCCGATCCCTGGACATGTTCCTTGGGACCCTGGTaGCATTGGCCCGGACAGAGATGTGGTCCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: PPDPWTCSLGPW*HWPGQRCGPSL
Trigger: GAGGCTGGGACCACATCTCTGTCCGGGCCAATGCCACCAGGGTCCCAAGGAACATGTCCAGGGATCGGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 72 bp GGACAGGCTAAGCAGGGCGAGCCAGTCATTCATGTCTaGCTCTGTGGCGGCAGCCAGGCGTACGGGCCACCT +
Preference number: 6 (lower is better)
Translates to: GQAKQGEPVIHV*LCGGSQAYGPP
Trigger: AGGTGGCCCGTACGCCTGGCTGCCGCCACAGAGCAAGACATGAATGACTGGCTCGCCCTGCTTAGCCTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 72 bp CGATCCCTGGACATGTTCCTTGGGACCCTGGTGGCATaGGCCCGGACAGAGATGTGGTCCCAGCCTCCGCCA +
Preference number: 6 (lower is better)
Translates to: RSLDMFLGTLVA*ARTEMWSQPPP
Trigger: TGGCGGAGGCTGGGACCACATCTCTGTCCGGGCCAATGCCACCAGGGTCCCAAGGAACATGTCCAGGGATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 90 bp GCGGGGTTGAGTTCAGACACACCCAGGCGGCACAGGACGTCCCCCTaGTCACTGACGGCCCATAGTGCAACATTGTGCCCTCTCCCGTCA +
Preference number: 6 (lower is better)
Translates to: AGLSSDTPRRHRTSP*SLTAHSATLCPLPS
Trigger: TGACGGGAGAGGGCACAATGTTGCACTATGGGCCGTCAGTGACAAGGGGGACGTCCTGTGCCGCCTGGGTGTGTCTGAACTCAACCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 72 bp ACACACCCAGGCGGCACAGGACGTCCCCCTTGTCACTaGCGGCCCATAGTGCAACATTGTGCCCTCTCCCGT +
Preference number: 6 (lower is better)
Translates to: THPGGTGRPPCH*RPIVQHCALSR
Trigger: ACGGGAGAGGGCACAATGTTGCACTATGGGCCGTCAGTGACAAGGGGGACGTCCTGTGCCGCCTGGGTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 72 bp AGGCATCGGTATCACTGGGTGCCGACTCTGTACCACTaGCCCTCACCTCGTCGCCGAAGAAGCAGCCAGCAC +
Preference number: 6 (lower is better)
Translates to: RHRYHWVPTLYH*PSPRRRRSSQH
Trigger: GTGCTGGCTGCTTCTTCGGCGACGAGGTGAGGGGCAGTGGTACAGAGTCGGCACCCAGTGATACCGATGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp CCCTGGGGTTTCCACGAGAGACCAGGAGGAGCCTTCTaGGTTGGGGTGGCTGACATCCTCTCGGTACCACAC +
Preference number: 6 (lower is better)
Translates to: PWGFHERPGGAF*VGVADILSVPH
Trigger: GTGTGGTACCGAGAGGATGTCAGCCACCCCAACCCAGAAGGCTCCTCCTGGTCTCTCGTGGAAACCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp ACCTGTGTCAGCTTCTGCTTGGGAGGGGAGGGGATGTaGTACCAGCAGTCACCAGCTGGCTGGGAGGGAGAC +
Preference number: 6 (lower is better)
Translates to: TCVSFCLGGEGM*YQQSPAGWEGD
Trigger: GTCTCCCTCCCAGCCAGCTGGTGACTGCTGGTACCACATCCCCTCCCCTCCCAAGCAGAAGCTGACACAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 90 bp GCCCCAGCAGCACTGGGTGGCCGCACTGACCCTCTTGAACTCCAATaGGACATCCTTGCAAAGCTCCCAGTACTGACCGGCCGTGGACAG +
Preference number: 6 (lower is better)
Translates to: APAALGGRTDPLELQ*DILAKLPVLTGRGQ
Trigger: CTGTCCACGGCCGGTCAGTACTGGGAGCTTTGCAAGGATGTCCAATTGGAGTTCAAGAGGGTCAGTGCGGCCACCCAGTGCTGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 72 bp CCGACCATCTCGATCCAGCTGGTGCCACAGGGGTTGTaGGAGTTGACACCCCTCCGGAACCACACTTTGCGG +
Preference number: 6 (lower is better)
Translates to: PTISIQLVPQGL*ELTPLRNHTLR
Trigger: CCGCAAAGTGTGGTTCCGGAGGGGTGTCAACTCTCACAACCCCTGTGGCACCAGCTGGATCGAGATGGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 72 bp CTCGGCCCACGACAATGGCCTTCCATGTCTTCCCGCTaGGCTCGCTGGGAGTCACACCCTGCCGGAAGTATA +
Preference number: 6 (lower is better)
Translates to: LGPRQWPSMSSR*ARWESHPAGSI
Trigger: TATACTTCCGGCAGGGTGTGACTCCCAGCGAGCTCAGCGGGAAGACATGGAAGGCCATTGTCGTGGGCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 72 bp GTGATGGCCCAGACCACACTGACGCCCGCGGAGACGTaGATGATACCGTTTTCAGATCCAGGAGGCTCCACC +
Preference number: 6 (lower is better)
Translates to: VMAQTTLTPAET*MIPFSDPGGST
Trigger: GGTGGAGCCTCCTGGATCTGAAAACGGTATCATGCACGTCTCCGCGGGCGTCAGTGTGGTCTGGGCCATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 72 bp GATGGTGAACCACTTAAGTGTAGAGCCCGCCTCCACTaGACATGCGCCTCCAGACACCCAGGCCCACAGAGG +
Preference number: 6 (lower is better)
Translates to: DGEPLKCRARLH*TCASRHPGPQR
Trigger: CCTCTGTGGGCCTGGGTGTCTGGAGGCGCATGTGCAGTGGAGGCGGGCTCTACACTTAAGTGGTTCACCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 72 bp AAGATGTCACCCTTGCAAGTGACAGACCAGATGGCCTaGGGGGATGGGCGTCCATGGACCTTCCGGCTCTCG +
Preference number: 6 (lower is better)
Translates to: KMSPLQVTDQMA*GDGRPWTFRLS
Trigger: CGAGAGCCGGAAGGTCCATGGACGCCCATCCCCGCAGGCCATCTGGTCTGTCACTTGCAAGGGTGACATCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp TCCACGAGAGACCAGGAGGAGCCTTCTGGGTTGGGGTaGCTGACATCCTCTCGGTACCACACCTTTCCCTGC +
Preference number: 6 (lower is better)
Translates to: STRDQEEPSGLG*LTSSRYHTFPC
Trigger: GCAGGGAAAGGTGTGGTACCGAGAGGATGTCAGCCACCCCAACCCAGAAGGCTCCTCCTGGTCTCTCGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp ACCACGCCTCGGCTGTTGGCCTCTATGATCCGCAAGTaGCCTCCCATCTGTCGCCAGAACATCTGGTCGCAG +
Preference number: 6 (lower is better)
Translates to: TTPRLLASMIRK*PPICRQNIWSQ
Trigger: CTGCGACCAGATGTTCTGGCGACAGATGGGAGGCCACTTGCGGATCATAGAGGCCAACAGCCGAGGCGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 90 bp CGGCACAGGACGTCCCCCTTGTCACTGACGGCCCATAGTGCAACATaGTGCCCTCTCCCGTCAGCATGTGCACTCTCTGGGATGATGGAC +
Preference number: 6 (lower is better)
Translates to: RHRTSPLSLTAHSAT*CPLPSACALSGMMD
Trigger: GTCCATCATCCCAGAGAGTGCACATGCTGACGGGAGAGGGCACAATGTTGCACTATGGGCCGTCAGTGACAAGGGGGACGTCCTGTGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 72 bp GTACCACACCTTTCCCTGCAGGGATACAGCCCACACTaGCAGGCGGCCGACTGGTTCCTCTGTGATCTCCCA +
Preference number: 6 (lower is better)
Translates to: VPHLSLQGYSPH*QAADWFLCDLP
Trigger: TGGGAGATCACAGAGGAACCAGTCGGCCGCCTGTCAGTGTGGGCTGTATCCCTGCAGGGAAAGGTGTGGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 72 bp TCTCGATCCAGCTGGTGCCACAGGGGTTGTGAGAGTTaGCACCCCTCCGGAACCACACTTTGCGGTCCTTCG +
Preference number: 6 (lower is better)
Translates to: SRSSWCHRGCES*HPSGTTLCGPS
Trigger: CGAAGGACCGCAAAGTGTGGTTCCGGAGGGGTGTCAACTCTCACAACCCCTGTGGCACCAGCTGGATCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 72 bp TCTTTGCCTTCAGTCAGGCAGGCGTTCTCCGTGGAGTaGTCAGTGTTCCCGCTGGTCTCGTGGCCCTTGGAC +
Preference number: 6 (lower is better)
Translates to: SLPSVRQAFSVE*SVFPLVSWPLD
Trigger: GTCCAAGGGCCACGAGACCAGCGGGAACACTGATCACTCCACGGAGAACGCCTGCCTGACTGAAGGCAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 72 bp CAATGCCCCATACCACGCCTCGGCTGTTGGCCTCTATaGTCCGCAAGTGGCCTCCCATCTGTCGCCAGAACA +
Preference number: 6 (lower is better)
Translates to: QCPIPRLGCWPL*SASGLPSVART
Trigger: TGTTCTGGCGACAGATGGGAGGCCACTTGCGGATCATAGAGGCCAACAGCCGAGGCGTGGTATGGGGCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 72 bp CATGTCTTCCCGCTGAGCTCGCTGGGAGTCACACCCTaGCGGAAGTATACGGCTCGGTCCTCACAGCTGATA +
Preference number: 6 (lower is better)
Translates to: HVFPLSSLGVTP*RKYTARSSQLI
Trigger: TATCAGCTGTGAGGACCGAGCCGTATACTTCCGGCAGGGTGTGACTCCCAGCGAGCTCAGCGGGAAGACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 72 bp GAACCACTTAAGTGTAGAGCCCGCCTCCACTGCACATaGGCCTCCAGACACCCAGGCCCACAGAGGATGATC +
Preference number: 6 (lower is better)
Translates to: EPLKCRARLHCT*ASRHPGPQRMI
Trigger: GATCATCCTCTGTGGGCCTGGGTGTCTGGAGGCGCATGTGCAGTGGAGGCGGGCTCTACACTTAAGTGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp AGGGACAGCGTCTGCACTGAAGGGGACAGGCCTGACTaGATGGTGAACCACTTAAGTGTAGAGCCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: RDSVCTEGDRPD*MVNHLSVEPAS
Trigger: GGAGGCGGGCTCTACACTTAAGTGGTTCACCATCCAGTCAGGCCTGTCCCCTTCAGTGCAGACGCTGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp AACATTGTGCCCTCTCCCGTCAGCATGTGCACTCTCTaGGATGATGGACACGTCGCTGAGGGTGATGGGGGC +
Preference number: 6 (lower is better)
Translates to: NIVPSPVSMCTL*DDGHVAEGDGG
Trigger: GCCCCCATCACCCTCAGCGACGTGTCCATCATCCCAGAGAGTGCACATGCTGACGGGAGAGGGCACAATGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 72 bp ACGTCCCCCTTGTCACTGACGGCCCATAGTGCAACATaGTGCCCTCTCCCGTCAGCATGTGCACTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: TSPLSLTAHSAT*CPLPSACALSG
Trigger: CCCAGAGAGTGCACATGCTGACGGGAGAGGGCACAATGTTGCACTATGGGCCGTCAGTGACAAGGGGGACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 72 bp AGTTCAGACACACCCAGGCGGCACAGGACGTCCCCCTaGTCACTGACGGCCCATAGTGCAACATTGTGCCCT +
Preference number: 6 (lower is better)
Translates to: SSDTPRRHRTSP*SLTAHSATLCP
Trigger: AGGGCACAATGTTGCACTATGGGCCGTCAGTGACAAGGGGGACGTCCTGTGCCGCCTGGGTGTGTCTGAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 72 bp GATGTCTGGCCCACAGACACCTGTGTCAGCTTCTGCTaGGGAGGGGAGGGGATGTGGTACCAGCAGTCACCA +
Preference number: 6 (lower is better)
Translates to: DVWPTDTCVSFC*GGEGMWYQQSP
Trigger: TGGTGACTGCTGGTACCACATCCCCTCCCCTCCCAAGCAGAAGCTGACACAGGTGTCTGTGGGCCAGACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 72 bp ACCTGGTCCAGGGGTCCCACAGACACTTTGCGTACATaGTTGGATACATGCTCCCAGCTGGAGCCCTGCGGG +
Preference number: 6 (lower is better)
Translates to: TWSRGPTDTLRT*LDTCSQLEPCG
Trigger: CCCGCAGGGCTCCAGCTGGGAGCATGTATCCAACAATGTACGCAAAGTGTCTGTGGGACCCCTGGACCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 90 bp TTGTTGGCAATCACCCAGACCTGGTCCAGGGGTCCCACAGACACTTaGCGTACATTGTTGGATACATGCTCCCAGCTGGAGCCCTGCGGG +
Preference number: 6 (lower is better)
Translates to: LLAITQTWSRGPTDT*RTLLDTCSQLEPCG
Trigger: CCCGCAGGGCTCCAGCTGGGAGCATGTATCCAACAATGTACGCAAAGTGTCTGTGGGACCCCTGGACCAGGTCTGGGTGATTGCCAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 72 bp GAGGCGGGGAAATCGCTGGCATACTGCCATCCTTCCTaGTCGGTGCCTCCGGGGACACTGAAATCCACATAC +
Preference number: 6 (lower is better)
Translates to: EAGKSLAYCHPS*SVPPGTLKSTY
Trigger: GTATGTGGATTTCAGTGTCCCCGGAGGCACCGATCAGGAAGGATGGCAGTATGCCAGCGATTTCCCCGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 72 bp TCCCCCTTGTCACTGACGGCCCATAGTGCAACATTGTaGCCTCTCCCGTCAGCATGTGCACTCTCTGGGATG +
Preference number: 6 (lower is better)
Translates to: SPLSLTAHSATL*PLPSACALSGM
Trigger: CATCCCAGAGAGTGCACATGCTGACGGGAGAGGGCACAATGTTGCACTATGGGCCGTCAGTGACAAGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp GGACATCCTTGCAAAGCTCCCAGTACTGACCGGCCGTaGACAGGGTATACACTCTCCCAAAGAGGTCCACCG +
Preference number: 6 (lower is better)
Translates to: GHPCKAPSTDRP*TGYTLSQRGPP
Trigger: CGGTGGACCTCTTTGGGAGAGTGTATACCCTGTCCACGGCCGGTCAGTACTGGGAGCTTTGCAAGGATGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp TACCCCAGACCTGGTCATTCAGCCCCACGTTCACCATaGTCATCTCTCCGACCATCTCGATCCAGCTGGTGC +
Preference number: 6 (lower is better)
Translates to: YPRPGHSAPRSP*SSLRPSRSSWC
Trigger: GCACCAGCTGGATCGAGATGGTCGGAGAGATGACCATGGTGAACGTGGGGCTGAATGACCAGGTCTGGGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp CCTGTCTCTCAACTTCCAAGGAGGCATCGGTATCACTaGGTGCCGACTCTGTACCACTGCCCCTCACCTCGT +
Preference number: 6 (lower is better)
Translates to: PVSQLPRRHRYH*VPTLYHCPSPR
Trigger: ACGAGGTGAGGGGCAGTGGTACAGAGTCGGCACCCAGTGATACCGATGCCTCCTTGGAAGTTGAGAGACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 72 bp GCACTGGGTGGCCGCACTGACCCTCTTGAACTCCAATaGGACATCCTTGCAAAGCTCCCAGTACTGACCGGC +
Preference number: 6 (lower is better)
Translates to: ALGGRTDPLELQ*DILAKLPVLTG
Trigger: GCCGGTCAGTACTGGGAGCTTTGCAAGGATGTCCAATTGGAGTTCAAGAGGGTCAGTGCGGCCACCCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 72 bp ATGCCCCAGCAGCACTGGGTGGCCGCACTGACCCTCTaGAACTCCAATTGGACATCCTTGCAAAGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: MPQQHWVAALTL*NSNWTSLQSSQ
Trigger: CTGGGAGCTTTGCAAGGATGTCCAATTGGAGTTCAAGAGGGTCAGTGCGGCCACCCAGTGCTGCTGGGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 72 bp TGGTTAGACACCTTCTTGGGCTCCTTTAGGTCAATGTaGGTCCAGGGCAGCTCAGCTGGCGTGGAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: WLDTFLGSFRSM*VQGSSAGVEAG
Trigger: CCCTGCCTCCACGCCAGCTGAGCTGCCCTGGACCAACATTGACCTAAAGGAGCCCAAGAAGGTGTCTAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 72 bp GGGCTCCCCTCCAAAATTCTCATCCACGTACCAGTCTaGCTCCCATTCCCAGTGTGGCGAAGGCAGTGCTAC +
Preference number: 6 (lower is better)
Translates to: GLPSKILIHVPV*LPFPVWRRQCY
Trigger: GTAGCACTGCCTTCGCCACACTGGGAATGGGAGTCAGACTGGTACGTGGATGAGAATTTTGGAGGGGAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 72 bp ACCGGTCAGTGGGCAGACCCCTGCTGGTATAGCCCGTaGCAGGGTTCCAACGCTGGTTCTCATAGATGTAGA +
Preference number: 6 (lower is better)
Translates to: TGQWADPCWYSP*QGSNAGSHRCR
Trigger: TCTACATCTATGAGAACCAGCGTTGGAACCCTGTCACGGGCTATACCAGCAGGGGTCTGCCCACTGACCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp CATAGGCCTCCTCTCGATGGCGGATGGGTACATCACTaGAGCACACATACAAGTAGACCTGGTTGTCGCCGG +
Preference number: 6 (lower is better)
Translates to: HRPPLDGGWVHH*STHTSRPGCRR
Trigger: CCGGCGACAACCAGGTCTACTTGTATGTGTGCTCCAGTGATGTACCCATCCGCCATCGAGAGGAGGCCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp CAGGGAGTTCCTTGGGGTCATCCTTTGAGGGGATCTTaGCCCAGGAGTCCCGGGATTTGTATCGCCTATACC +
Preference number: 6 (lower is better)
Translates to: QGVPWGHPLRGS*PRSPGICIAYT
Trigger: GGTATAGGCGATACAAATCCCGGGACTCCTGGGCCAAGATCCCCTCAAAGGATGACCCCAAGGAACTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp TCACATCTGACTGTGTGTAAATGTTGCTGGTGCTACTaGCCAGGCCTTGGAAGCAACCGCCGCCATAGCCGC +
Preference number: 6 (lower is better)
Translates to: SHLTVCKCCWCY*PGLGSNRRHSR
Trigger: GCGGCTATGGCGGCGGTTGCTTCCAAGGCCTGGCCAGTAGCACCAGCAACATTTACACACAGTCAGATGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp TGGTTTTGTACCCATGGTAAGAGGCGGGGAAATCGCTaGCATACTGCCATCCTTCCTGATCGGTGCCTCCGG +
Preference number: 6 (lower is better)
Translates to: WFCTHGKRRGNR*HTAILPDRCLR
Trigger: CCGGAGGCACCGATCAGGAAGGATGGCAGTATGCCAGCGATTTCCCCGCCTCTTACCATGGGTACAAAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 72 bp TCGGGAAAGCCAGCAGCTGGCTGGTTAGACACCTTCTaGGGCTCCTTTAGGTCAATGTTGGTCCAGGGCAGC +
Preference number: 6 (lower is better)
Translates to: SGKPAAGWLDTF*GSFRSMLVQGS
Trigger: GCTGCCCTGGACCAACATTGACCTAAAGGAGCCCAAGAAGGTGTCTAACCAGCCAGCTGCTGGCTTTCCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 72 bp TCCTTTGAGGGGATCTTGGCCCAGGAGTCCCGGGATTaGTATCGCCTATACCGGATCCATTTCCTCCTTCGC +
Preference number: 6 (lower is better)
Translates to: SFEGILAQESRD*YRLYRIHFLLR
Trigger: GCGAAGGAGGAAATGGATCCGGTATAGGCGATACAAATCCCGGGACTCCTGGGCCAAGATCCCCTCAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 72 bp TCAGGGAGTTCCTTGGGGTCATCCTTTGAGGGGATCTaGGCCCAGGAGTCCCGGGATTTGTATCGCCTATAC +
Preference number: 6 (lower is better)
Translates to: SGSSLGSSFEGI*AQESRDLYRLY
Trigger: GTATAGGCGATACAAATCCCGGGACTCCTGGGCCAAGATCCCCTCAAAGGATGACCCCAAGGAACTCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 72 bp ATCACCCAGACCTGGTCCAGGGGTCCCACAGACACTTaGCGTACATTGTTGGATACATGCTCCCAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: ITQTWSRGPTDT*RTLLDTCSQLE
Trigger: CTCCAGCTGGGAGCATGTATCCAACAATGTACGCAAAGTGTCTGTGGGACCCCTGGACCAGGTCTGGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS GCA 72 bp CACTCTTCACATCTGACTGTGTGTAAATGTTGCTGGTaGTACTGGCCAGGCCTTGGAAGCAACCGCCGCCAT +
Preference number: 6 (lower is better)
Translates to: HSSHLTVCKCCW*YWPGLGSNRRH
Trigger: ATGGCGGCGGTTGCTTCCAAGGCCTGGCCAGTAGCACCAGCAACATTTACACACAGTCAGATGTGAAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp TCCAGGAGGCTCCACCATGGACCAGTAACTTCCTTTTaGGTTGTTCCTGCAGACTCCTTCTCTGACCAGAGC +
Preference number: 6 (lower is better)
Translates to: SRRLHHGPVTSF*VVPADSFSDQS
Trigger: GCTCTGGTCAGAGAAGGAGTCTGCAGGAACAACCCAAAAGGAAGTTACTGGTCCATGGTGGAGCCTCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 90 bp TTGGGGTCATCCTTTGAGGGGATCTTGGCCCAGGAGTCCCGGGATTaGTATCGCCTATACCGGATCCATTTCCTCCTTCGCACACATGAA +
Preference number: 6 (lower is better)
Translates to: LGSSFEGILAQESRD*YRLYRIHFLLRTHE
Trigger: TTCATGTGTGCGAAGGAGGAAATGGATCCGGTATAGGCGATACAAATCCCGGGACTCCTGGGCCAAGATCCCCTCAAAGGATGACCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 72 bp AACTCCAATTGGACATCCTTGCAAAGCTCCCAGTACTaGCCGGCCGTGGACAGGGTATACACTCTCCCAAAG +
Preference number: 6 (lower is better)
Translates to: NSNWTSLQSSQY*PAVDRVYTLPK
Trigger: CTTTGGGAGAGTGTATACCCTGTCCACGGCCGGTCAGTACTGGGAGCTTTGCAAGGATGTCCAATTGGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS TCA 72 bp GTAGGTACTTCTTCTCCTCATGGACCACATAATAGATaGAGAGGATGCTGTCTCGAGCCCCGTCGTGCCCTG +
Preference number: 6 (lower is better)
Translates to: VGTSSPHGPHNR*RGCCLEPRRAL
Trigger: CAGGGCACGACGGGGCTCGAGACAGCATCCTCTTCATCTATTATGTGGTCCATGAGGAGAAGAAGTACCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 72 bp TGGCCCTTGGACAAGCTCCCTTTAAGGTTTGTGGAATaGTCCAAAGCTTCTTTGGGGAGAGGCTGTTCGGGG +
Preference number: 6 (lower is better)
Translates to: WPLDKLPLRFVE*SKASLGRGCSG
Trigger: CCCCGAACAGCCTCTCCCCAAAGAAGCTTTGGACAATTCCACAAACCTTAAAGGGAGCTTGTCCAAGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 90 bp TTGGACAAGCTCCCTTTAAGGTTTGTGGAATTGTCCAAAGCTTCTTaGGGGAGAGGCTGTTCGGGGCCCTGTCTCTCAACTTCCAAGGAG +
Preference number: 6 (lower is better)
Translates to: LDKLPLRFVELSKAS*GRGCSGPCLSTSKE
Trigger: CTCCTTGGAAGTTGAGAGACAGGGCCCCGAACAGCCTCTCCCCAAAGAAGCTTTGGACAATTCCACAAACCTTAAAGGGAGCTTGTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CCA 72 bp AACGCTGATTCTCATAGGCCTCCTCTCGATGGCGGATaGGTACATCACTGGAGCACACATACAAGTAGACCT +
Preference number: 6 (lower is better)
Translates to: NADSHRPPLDGG*VHHWSTHTSRP
Trigger: AGGTCTACTTGTATGTGTGCTCCAGTGATGTACCCATCCGCCATCGAGAGGAGGCCTATGAGAATCAGCGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7
CDS CAA 72 bp CTCCCTTTAAGGTTTGTGGAATTGTCCAAAGCTTCTTaGGGGAGAGGCTGTTCGGGGCCCTGTCTCTCAACT +
Preference number: 6 (lower is better)
Translates to: LPLRFVELSKAS*GRGCSGPCLST
Trigger: AGTTGAGAGACAGGGCCCCGAACAGCCTCTCCCCAAAGAAGCTTTGGACAATTCCACAAACCTTAAAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085701.7