Pregenerated sensors for TEAD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030353Ensembl transcript IDs: ENSMUST00000006311.13, ENSMUST00000112157.4, ENSMUST00000130454.8
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTGGAAATGCTGGCCCTGAGGCAGGACGCCCTACCTCCAAGCCTTaGTTCAGTTTGGAGACCCTGCCCCCTGCAGGGCCACTGCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: AGNAGPEAGRPTSKP*FSLETLPPAGPLQK Trigger: TTTCTGCAGTGGCCCTGCAGGGGGCAGGGTCTCCAAACTGAAGCAAGGCTTGGAGGTAGGGCGTCCTGCCTCAGGGCCAGCATTTCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR GCA 90 bp | GGTTCCTTGGCTGTCCTGGAGTACTTTGGGCCATTGCTTCCAGCTTaGTTCCTGATGCCCCCTTCTCCCCTGCCCTTCTGGGCTCACACA | + |
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Preference number: 1 (lower is better) Translates to: GSLAVLEYFGPLLPA*FLMPPSPLPFWAHT Trigger: TGTGTGAGCCCAGAAGGGCAGGGGAGAAGGGGGCATCAGGAAGCAAGCTGGAAGCAATGGCCCAAAGTACTCCAGGACAGCCAAGGAACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR CCA 90 bp | TTTGCTCCTGGTAAGAAGAGACCTGGCAACTCTGCTTGGCTCTCTTaGCACTTCCAGGGGACTGTCCCTGAAGGTCCCCTCCCAGGTCCC | + |
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Preference number: 1 (lower is better) Translates to: FAPGKKRPGNSAWLS*HFQGTVPEGPLPGP Trigger: GGGACCTGGGAGGGGACCTTCAGGGACAGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAGAGTTGCCAGGTCTCTTCTTACCAGGAGCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
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| 3UTR GCA 90 bp | TTCCAGCAGCTGAGAAGGGTCTTGAGCTTTGGTGTCTTGGTGATATaGCTGGCTGAGTCCACCGGGGTTCTGGTTCCTTGGCTGTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: FQQLRRVLSFGVLVI*LAESTGVLVPWLSW Trigger: CCAGGACAGCCAAGGAACCAGAACCCCGGTGGACTCAGCCAGGCATATCACCAAGACACCAAAGCTCAAGACCCTTCTCAGCTGCTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR CCA 90 bp | ATCAGGCAGTTTGCTCCTGGTAAGAAGAGACCTGGCAACTCTGCTTaGCTCTCTTGGCACTTCCAGGGGACTGTCCCTGAAGGTCCCCTC | + |
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Preference number: 1 (lower is better) Translates to: IRQFAPGKKRPGNSA*LSWHFQGTVPEGPL Trigger: GAGGGGACCTTCAGGGACAGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAGAGTTGCCAGGTCTCTTCTTACCAGGAGCAAACTGCCTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
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| 3UTR GCA 90 bp | ACTCCAGAGCCCTTGTCCCTCACCTCTGTAGCATCACCACAATGCTaGCCTGCCCATTTCTGCATCCTCACAGATGCATCCCTGAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: TPEPLSLTSVASPQC*PAHFCILTDASLSP Trigger: AGGACTCAGGGATGCATCTGTGAGGATGCAGAAATGGGCAGGGCAGCATTGTGGTGATGCTACAGAGGTGAGGGACAAGGGCTCTGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR GCA 90 bp | CTGACTCCAGAGCCCTTGTCCCTCACCTCTGTAGCATCACCACAATaGTGCCCTGCCCATTTCTGCATCCTCACAGATGCATCCCTGAGT | + |
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Preference number: 1 (lower is better) Translates to: LTPEPLSLTSVASPQ*CPAHFCILTDASLS Trigger: ACTCAGGGATGCATCTGTGAGGATGCAGAAATGGGCAGGGCAGCATTGTGGTGATGCTACAGAGGTGAGGGACAAGGGCTCTGGAGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR GCA 90 bp | AGAGCCCTTGTCCCTCACCTCTGTAGCATCACCACAATGCTGCCCTaGCCATTTCTGCATCCTCACAGATGCATCCCTGAGTCCTGGATA | + |
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Preference number: 1 (lower is better) Translates to: RALVPHLCSITTMLP*PFLHPHRCIPESWI Trigger: TATCCAGGACTCAGGGATGCATCTGTGAGGATGCAGAAATGGGCAGGGCAGCATTGTGGTGATGCTACAGAGGTGAGGGACAAGGGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR GCA 90 bp | TCCCTCACCTCTGTAGCATCACCACAATGCTGCCCTGCCCATTTCTaGATCCTCACAGATGCATCCCTGAGTCCTGGATACACACAAACA | + |
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Preference number: 1 (lower is better) Translates to: SLTSVASPQCCPAHF*ILTDASLSPGYTQT Trigger: TGTTTGTGTGTATCCAGGACTCAGGGATGCATCTGTGAGGATGCAGAAATGGGCAGGGCAGCATTGTGGTGATGCTACAGAGGTGAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR CCA 90 bp | GTATCTTTCTTCCTGAGGCTCCAGACTATTAGAACTGGCTCCAACTaGGGAAAGCAGACACCAGAAAGCCTTGAGAGGGCAGCAGAGAGA | + |
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Preference number: 1 (lower is better) Translates to: VSFFLRLQTIRTGSN*GKQTPESLERAAER Trigger: TCTCTCTGCTGCCCTCTCAAGGCTTTCTGGTGTCTGCTTTCCCCAGTTGGAGCCAGTTCTAATAGTCTGGAGCCTCAGGAAGAAAGATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR TCA 90 bp | CACAATGCTGCCCTGCCCATTTCTGCATCCTCACAGATGCATCCCTaGGTCCTGGATACACACAAACATGCCCAGGTTGTATCTTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: HNAALPISASSQMHP*VLDTHKHAQVVSFF Trigger: GAAGAAAGATACAACCTGGGCATGTTTGTGTGTATCCAGGACTCAGGGATGCATCTGTGAGGATGCAGAAATGGGCAGGGCAGCATTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR TCA 90 bp | GAGTCCTGGATACACACAAACATGCCCAGGTTGTATCTTTCTTCCTaGGGCTCCAGACTATTAGAACTGGCTCCAACTGGGGAAAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: ESWIHTNMPRLYLSS*GSRLLELAPTGESR Trigger: TCTGCTTTCCCCAGTTGGAGCCAGTTCTAATAGTCTGGAGCCTCAGGAAGAAAGATACAACCTGGGCATGTTTGTGTGTATCCAGGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR GCA 90 bp | CCTCTGAAAATACTTGACACCTTGGGTTTATTGGGGGTTGAGCACTaGAAGATCAGGCAGTTTGCTCCTGGTAAGAAGAGACCTGGCAAC | + |
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Preference number: 1 (lower is better) Translates to: PLKILDTLGLLGVEH*KIRQFAPGKKRPGN Trigger: GTTGCCAGGTCTCTTCTTACCAGGAGCAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGTCAAGTATTTTCAGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR CAA 90 bp | GCTGGCCCTGAGGCAGGACGCCCTACCTCCAAGCCTTGCTTCAGTTaGGAGACCCTGCCCCCTGCAGGGCCACTGCAGAAAGAACAAAGC | + |
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Preference number: 2 (lower is better) Translates to: AGPEAGRPTSKPCFS*ETLPPAGPLQKEQS Trigger: GCTTTGTTCTTTCTGCAGTGGCCCTGCAGGGGGCAGGGTCTCCAAACTGAAGCAAGGCTTGGAGGTAGGGCGTCCTGCCTCAGGGCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR-3UTR GCA 90 bp | CAGGGCCACTGCAGAAAGAACAAAGCCACCCGAGTAGCTCTTACCCAGTCTCCCTGCCCCCTTCTCCCCTaGCCTTCTGGGCTCACACAG | + |
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Preference number: 2 (lower is better) Translates to: QGHCRKNKATRVALTQSPCPLLP*PSGLTQ Trigger: CTGTGTGAGCCCAGAAGGGCAGGGGAGAAGGGGGCA...GGGAGACTGGGTAAGAGCTACTCGGGTGGCTTTGTTCTTTCTGCAGTGGCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR CAA 90 bp | TGGTTCCTTGGCTGTCCTGGAGTACTTTGGGCCATTGCTTCCAGCTaGCTTCCTGATGCCCCCTTCTCCCCTGCCCTTCTGGGCTCACAC | + |
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Preference number: 2 (lower is better) Translates to: WFLGCPGVLWAIASS*LPDAPFSPALLGSH Trigger: GTGTGAGCCCAGAAGGGCAGGGGAGAAGGGGGCATCAGGAAGCAAGCTGGAAGCAATGGCCCAAAGTACTCCAGGACAGCCAAGGAACCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR-3UTR TCA 90 bp | ACACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGCTCCTGCCAGGGGACTGTCCCTaGAGGTCCCCTCCCAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: TPWVYWGLSTARSGSLLLPGDCP*RSPPRS Trigger: GGACCTGGGAGGGGACCTTCAGGGACAGTCCCCTGG...CAGGAGCAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
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| 3UTR-3UTR TCA 90 bp | GGGCCACTGCAGAAAGAACAAAGCCACCCGAGTAGCTCTTACCCAGTCTCCCTCTTCCAGCTTGCTTCCTaGTGCCCCCTTCTCCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: GPLQKEQSHPSSSYPVSLFQLAS*CPLLPC Trigger: GCAGGGGAGAAGGGGGCATCAGGAAGCAAGCTGGAA...GAGGGAGACTGGGTAAGAGCTACTCGGGTGGCTTTGTTCTTTCTGCAGTGGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR CAA 90 bp | GTGACCAGCAGCAGGAGTGTGAGGTTCCAGCAGCTGAGAAGGGTCTaGAGCTTTGGTGTCTTGGTGATATGCCTGGCTGAGTCCACCGGG | + |
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Preference number: 2 (lower is better) Translates to: VTSSRSVRFQQLRRV*SFGVLVICLAESTG Trigger: CCCGGTGGACTCAGCCAGGCATATCACCAAGACACCAAAGCTCAAGACCCTTCTCAGCTGCTGGAACCTCACACTCCTGCTGCTGGTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR-3UTR TCA 90 bp | GAACTGGCTCCAACTGGGGAAAGCAGACACCAGAAAGCCTTGAGAGGGCAGCAGGCATCTCTGGGTGTGTaGCCTACGTGCAATCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: ELAPTGESRHQKALRGQQASLGV*PTCNLS Trigger: GGACAGATTGCACGTAGGTCACACACCCAGAGATGC...CTGCTGCCCTCTCAAGGCTTTCTGGTGTCTGCTTTCCCCAGTTGGAGCCAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR-3UTR CCA 90 bp | GAACTGGCTCCAACTGGGGAAAGCAGACACCAGAAAGCCTTGAGAGGGCAGCAGTCTGCTTGGCTCTCTTaGCACTTCCAGGGGACTGTC | + |
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Preference number: 2 (lower is better) Translates to: ELAPTGESRHQKALRGQQSAWLS*HFQGTV Trigger: GACAGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAGA...CTGCTGCCCTCTCAAGGCTTTCTGGTGTCTGCTTTCCCCAGTTGGAGCCAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR-3UTR CCA 90 bp | GGGCCACTGCAGAAAGAACAAAGCCACCCGAGTAGCTCTTACCCAGTCTCCCTCCCTGGCAACTCTGCTTaGCTCTCTTGGCACTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: GPLQKEQSHPSSSYPVSLPGNSA*LSWHFQ Trigger: CTGGAAGTGCCAAGAGAGCCAAGCAGAGTTGCCAGG...GAGGGAGACTGGGTAAGAGCTACTCGGGTGGCTTTGTTCTTTCTGCAGTGGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR CAA 90 bp | AGTGTGAGGTTCCAGCAGCTGAGAAGGGTCTTGAGCTTTGGTGTCTaGGTGATATGCCTGGCTGAGTCCACCGGGGTTCTGGTTCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: SVRFQQLRRVLSFGV*VICLAESTGVLVPW Trigger: CCAAGGAACCAGAACCCCGGTGGACTCAGCCAGGCATATCACCAAGACACCAAAGCTCAAGACCCTTCTCAGCTGCTGGAACCTCACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR-3UTR TCA 90 bp | ATACTTGACACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTCCAGGGGACTGTCCCTaGAGGTCCCCTCCCAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: ILDTLGLLGVEHCKIRQFPGDCP*RSPPRS Trigger: GGACCTGGGAGGGGACCTTCAGGGACAGTCCCCTGG...AAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGTCAAGTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
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| 3UTR-3UTR GCA 90 bp | CTTGTCCCTCACCTCTGTAGCATCACCACAATGCTGCCCTGCCCATTTCTGCATCCCCTGCAGGGCCACTaGAGAAAGAACAAAGCCACC | + |
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Preference number: 2 (lower is better) Translates to: LVPHLCSITTMLPCPFLHPLQGH*RKNKAT Trigger: GGTGGCTTTGTTCTTTCTGCAGTGGCCCTGCAGGGG...ATGCAGAAATGGGCAGGGCAGCATTGTGGTGATGCTACAGAGGTGAGGGACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR CAA 90 bp | TTAAAGGTTGCACACCAAAGTCAGGCTAGACTGACTCCAGAGCCCTaGTCCCTCACCTCTGTAGCATCACCACAATGCTGCCCTGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: LKVAHQSQARLTPEP*SLTSVASPQCCPAH Trigger: ATGGGCAGGGCAGCATTGTGGTGATGCTACAGAGGTGAGGGACAAGGGCTCTGGAGTCAGTCTAGCCTGACTTTGGTGTGCAACCTTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR-3UTR CCA 90 bp | CAGGTTGTATCTTTCTTCCTGAGGCTCCAGACTATTAGAACTGGCTCCAACTGGAAGCCGAGGAGCCTGTaGAGGCCAGGCAGCTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: QVVSFFLRLQTIRTGSNWKPRSL*RPGSWK Trigger: TTTCCAGCTGCCTGGCCTCCACAGGCTCCTCGGCTT...CCAGTTGGAGCCAGTTCTAATAGTCTGGAGCCTCAGGAAGAAAGATACAACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR CAA 90 bp | ACACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTaGCTCCTGGTAAGAAGAGACCTGGCAACTCTGCTTGGCTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: TPWVYWGLSTARSGS*LLVRRDLATLLGSL Trigger: AAGAGAGCCAAGCAGAGTTGCCAGGTCTCTTCTTACCAGGAGCAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
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| 3UTR-3UTR CCA 90 bp | TACTTGACACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGTCTGCTTGGCTCTCTTaGCACTTCCAGGGGACTGTC | + |
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Preference number: 2 (lower is better) Translates to: YLTPWVYWGLSTARSGSLSAWLS*HFQGTV Trigger: GACAGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAGA...CAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGTCAAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
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| 3UTR CAA 90 bp | GGGCTCACACAGGCCAAACTAGCTCCTCTGAAAATACTTGACACCTaGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: GLTQAKLAPLKILDT*GLLGVEHCKIRQFA Trigger: AGCAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGTCAAGTATTTTCAGAGGAGCTAGTTTGGCCTGTGTGAGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR-3UTR GCA 90 bp | CAGGTTGTATCTTTCTTCCTGAGGCTCCAGACTATTAGAACTGGCTCCAACTGGCCATTGCTTCCAGCTTaGTTCCTGATGCCCCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: QVVSFFLRLQTIRTGSNWPLLPA*FLMPPS Trigger: AGAAGGGGGCATCAGGAAGCAAGCTGGAAGCAATGG...CCAGTTGGAGCCAGTTCTAATAGTCTGGAGCCTCAGGAAGAAAGATACAACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR-3UTR GCA 90 bp | CAGGTTGTATCTTTCTTCCTGAGGCTCCAGACTATTAGAACTGGCTCCAACTGGCCTACCTCCAAGCCTTaGTTCAGTTTGGAGACCCTG | + |
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Preference number: 2 (lower is better) Translates to: QVVSFFLRLQTIRTGSNWPTSKP*FSLETL Trigger: CAGGGTCTCCAAACTGAAGCAAGGCTTGGAGGTAGG...CCAGTTGGAGCCAGTTCTAATAGTCTGGAGCCTCAGGAAGAAAGATACAACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR CAA 90 bp | CAGGCCAAACTAGCTCCTCTGAAAATACTTGACACCTTGGGTTTATaGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGCTCCTGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: QAKLAPLKILDTLGL*GVEHCKIRQFAPGK Trigger: CTTACCAGGAGCAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGTCAAGTATTTTCAGAGGAGCTAGTTTGGCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR GCA 72 bp | GCTGGCCCTGAGGCAGGACGCCCTACCTCCAAGCCTTaGTTCAGTTTGGAGACCCTGCCCCCTGCAGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: AGPEAGRPTSKP*FSLETLPPAGP Trigger: TGGCCCTGCAGGGGGCAGGGTCTCCAAACTGAAGCAAGGCTTGGAGGTAGGGCGTCCTGCCTCAGGGCCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR GCA 72 bp | GCTGTCCTGGAGTACTTTGGGCCATTGCTTCCAGCTTaGTTCCTGATGCCCCCTTCTCCCCTGCCCTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: AVLEYFGPLLPA*FLMPPSPLPFW Trigger: CCAGAAGGGCAGGGGAGAAGGGGGCATCAGGAAGCAAGCTGGAAGCAATGGCCCAAAGTACTCCAGGACAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR GCA 72 bp | CTCCAAGCCTTGCTTCAGTTTGGAGACCCTGCCCCCTaGAGGGCCACTGCAGAAAGAACAAAGCCACCCGAG | + |
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Preference number: 3 (lower is better) Translates to: LQALLQFGDPAP*RATAERTKPPE Trigger: CTCGGGTGGCTTTGTTCTTTCTGCAGTGGCCCTGCAGGGGGCAGGGTCTCCAAACTGAAGCAAGGCTTGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR GCA 72 bp | CCTAAACCCAGCCCTGTTTGCAGGGATGGAGCCTTCTaGAGTAGCCATTCTCAGGCACCGATGGCAGGACAG | + |
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Preference number: 3 (lower is better) Translates to: PKPSPVCRDGAF*SSHSQAPMAGQ Trigger: CTGTCCTGCCATCGGTGCCTGAGAATGGCTACTGCAGAAGGCTCCATCCCTGCAAACAGGGCTGGGTTTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR CCA 72 bp | GGTAAGAAGAGACCTGGCAACTCTGCTTGGCTCTCTTaGCACTTCCAGGGGACTGTCCCTGAAGGTCCCCTC | + |
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Preference number: 3 (lower is better) Translates to: GKKRPGNSAWLS*HFQGTVPEGPL Trigger: GAGGGGACCTTCAGGGACAGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAGAGTTGCCAGGTCTCTTCTTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
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| 3UTR-3UTR CAA 90 bp | GGGCAGCAGAGAGACAGATCCAGGCCCTCCAGAGTGAGAGAAGCAATGGGGCTGGCAAGATCAGGCAGTTaGCTCCTGGTAAGAAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: GQQRDRSRPSRVREAMGLARSGS*LLVRRD Trigger: GTCTCTTCTTACCAGGAGCAAACTGCCTGATCTTGC...CAGCCCCATTGCTTCTCTCACTCTGGAGGGCCTGGATCTGTCTCTCTGCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR TCA 72 bp | GGTCTTGAGCTTTGGTGTCTTGGTGATATGCCTGGCTaGGTCCACCGGGGTTCTGGTTCCTTGGCTGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: GLELWCLGDMPG*VHRGSGSLAVL Trigger: CAGGACAGCCAAGGAACCAGAACCCCGGTGGACTCAGCCAGGCATATCACCAAGACACCAAAGCTCAAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR-3UTR CAA 90 bp | GAACTGGCTCCAACTGGGGAAAGCAGACACCAGAAAGCCTTGAGAGGGCAGCAGCTGTCCTGGAGTACTTaGGGCCATTGCTTCCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: ELAPTGESRHQKALRGQQLSWST*GHCFQL Trigger: AAGCTGGAAGCAATGGCCCAAAGTACTCCAGGACAG...CTGCTGCCCTCTCAAGGCTTTCTGGTGTCTGCTTTCCCCAGTTGGAGCCAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR GCA 72 bp | GTCCCTCACCTCTGTAGCATCACCACAATGCTGCCCTaGCCATTTCTGCATCCTCACAGATGCATCCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: VPHLCSITTMLP*PFLHPHRCIPE Trigger: CTCAGGGATGCATCTGTGAGGATGCAGAAATGGGCAGGGCAGCATTGTGGTGATGCTACAGAGGTGAGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR GCA 72 bp | CCCTTGTCCCTCACCTCTGTAGCATCACCACAATGCTaGCCTGCCCATTTCTGCATCCTCACAGATGCATCC | + |
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Preference number: 3 (lower is better) Translates to: PLSLTSVASPQC*PAHFCILTDAS Trigger: GGATGCATCTGTGAGGATGCAGAAATGGGCAGGGCAGCATTGTGGTGATGCTACAGAGGTGAGGGACAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR GCA 72 bp | GAGCCCTTGTCCCTCACCTCTGTAGCATCACCACAATaGTGCCCTGCCCATTTCTGCATCCTCACAGATGCA | + |
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Preference number: 3 (lower is better) Translates to: EPLSLTSVASPQ*CPAHFCILTDA Trigger: TGCATCTGTGAGGATGCAGAAATGGGCAGGGCAGCATTGTGGTGATGCTACAGAGGTGAGGGACAAGGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR CCA 72 bp | TTTGCTCCTGGTAAGAAGAGACCTGGCAACTCTGCTTaGCTCTCTTGGCACTTCCAGGGGACTGTCCCTGAA | + |
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Preference number: 3 (lower is better) Translates to: FAPGKKRPGNSA*LSWHFQGTVPE Trigger: TTCAGGGACAGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAGAGTTGCCAGGTCTCTTCTTACCAGGAGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
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| 3UTR TCA 72 bp | GCCCTGCCCATTTCTGCATCCTCACAGATGCATCCCTaGGTCCTGGATACACACAAACATGCCCAGGTTGTA | + |
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Preference number: 3 (lower is better) Translates to: ALPISASSQMHP*VLDTHKHAQVV Trigger: TACAACCTGGGCATGTTTGTGTGTATCCAGGACTCAGGGATGCATCTGTGAGGATGCAGAAATGGGCAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR GCA 72 bp | AACTATGTTGCAGCCACACCTAAACCCAGCCCTGTTTaGAGGGATGGAGCCTTCTGCAGTAGCCATTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: NYVAATPKPSPV*RDGAFCSSHSQ Trigger: CTGAGAATGGCTACTGCAGAAGGCTCCATCCCTGCAAACAGGGCTGGGTTTAGGTGTGGCTGCAACATAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| 3UTR CCA 72 bp | TTCCTGAGGCTCCAGACTATTAGAACTGGCTCCAACTaGGGAAAGCAGACACCAGAAAGCCTTGAGAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: FLRLQTIRTGSN*GKQTPESLERA Trigger: TGCCCTCTCAAGGCTTTCTGGTGTCTGCTTTCCCCAGTTGGAGCCAGTTCTAATAGTCTGGAGCCTCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| 3UTR-3UTR CAA 90 bp | CAGGTTGTATCTTTCTTCCTGAGGCTCCAGACTATTAGAACTGGCTCCAACTGGGCCATTGCTTCCAGCTaGCTTCCTGATGCCCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: QVVSFFLRLQTIRTGSNWAIASS*LPDAPF Trigger: GAAGGGGGCATCAGGAAGCAAGCTGGAAGCAATGGC...CCAGTTGGAGCCAGTTCTAATAGTCTGGAGCCTCAGGAAGAAAGATACAACCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTCAGTTTGGAGACCCTGCCCCCTGCAGGGCCACTGCAGAAAGAACAAAGCAAAATACTTGACACCTaGGGTTTATTGGGGGTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: CFSLETLPPAGPLQKEQSKILDT*GLLGVE Trigger: CTCAACCCCCAATAAACCCAAGGTGTCAAGTATTTT...GCTTTGTTCTTTCTGCAGTGGCCCTGCAGGGGGCAGGGTCTCCAAACTGAAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| 3UTR-3UTR CAA 90 bp | ATACTTGACACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTACCTGGCAACTCTGCTaGGCTCTCTTGGCACTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: ILDTLGLLGVEHCKIRQFTWQLC*ALLALP Trigger: TGGAAGTGCCAAGAGAGCCAAGCAGAGTTGCCAGGT...AAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGTCAAGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| 3UTR GCA 72 bp | ACAGATGCATCCCTGAGTCCTGGATACACACAAACATaGCCAGGTTGTATCTTTCTTCCTGAGGCTCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: TDASLSPGYTQT*PGCIFLPEAPD Trigger: GTCTGGAGCCTCAGGAAGAAAGATACAACCTGGGCATGTTTGTGTGTATCCAGGACTCAGGGATGCATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| 3UTR-3UTR CAA 90 bp | CAGGTTGTATCTTTCTTCCTGAGGCTCCAGACTATTAGAACTGGCTCCAACTGGTTGAGCTTTGGTGTCTaGGTGATATGCCTGGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: QVVSFFLRLQTIRTGSNWLSFGV*VICLAE Trigger: CTCAGCCAGGCATATCACCAAGACACCAAAGCTCAA...CCAGTTGGAGCCAGTTCTAATAGTCTGGAGCCTCAGGAAGAAAGATACAACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| 3UTR TCA 72 bp | ATACACACAAACATGCCCAGGTTGTATCTTTCTTCCTaGGGCTCCAGACTATTAGAACTGGCTCCAACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: IHTNMPRLYLSS*GSRLLELAPTG Trigger: CCCAGTTGGAGCCAGTTCTAATAGTCTGGAGCCTCAGGAAGAAAGATACAACCTGGGCATGTTTGTGTGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| 3UTR GCA 72 bp | ATACTTGACACCTTGGGTTTATTGGGGGTTGAGCACTaGAAGATCAGGCAGTTTGCTCCTGGTAAGAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ILDTLGLLGVEH*KIRQFAPGKKR Trigger: TCTCTTCTTACCAGGAGCAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGTCAAGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CCA 90 bp | CTGCTTGGCTCTCTTGGCACTTCCAGGGGACTGTCCCTGAAGGTCCCCTCCCAGCGACGGGCAAGCACCTaGATGTGGCTGGAGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLGSLGTSRGLSLKVPSQRRAST*MWLETC Trigger: GCAGGTCTCCAGCCACATCCAGGTGCTTGCCCGTCG...CTGGGAGGGGACCTTCAGGGACAGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CCA 90 bp | GGGCAGCAGAGAGACAGATCCAGGCCCTCCAGAGTGAGAGAAGCAATGGGGCTGCGGAGGGTGAGGGGGTaGGCCCTGCAGGAGACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GQQRDRSRPSRVREAMGLRRVRG*ALQETQ Trigger: TTGAGTCTCCTGCAGGGCCCACCCCCTCACCCTCCG...CAGCCCCATTGCTTCTCTCACTCTGGAGGGCCTGGATCTGTCTCTCTGCTGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| CDS-3UTR CCA 90 bp | TGGCTCTCTTGGCACTTCCAGGGGACTGTCCCTGAAGGTCCCCTCCCAGGTCCCGGCTCTCGTACTGGCTaGAGACCCCATAGAAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: WLSWHFQGTVPEGPLPGPGSRTG*RPHRRR Trigger: GCGCCTTCTATGGGGTCTCCAGCCAGTACGAGAGCC...GGGACCTGGGAGGGGACCTTCAGGGACAGTCCCCTGGAAGTGCCAAGAGAGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CCA 90 bp | CTGCTTGGCTCTCTTGGCACTTCCAGGGGACTGTCCCTGAAGGTCCCCTCCCAGGGCTCTCGTACTGGCTaGAGACCCCATAGAAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LLGSLGTSRGLSLKVPSQGSRTG*RPHRRR Trigger: GCGCCTTCTATGGGGTCTCCAGCCAGTACGAGAGCC...CTGGGAGGGGACCTTCAGGGACAGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| 3UTR CAA 72 bp | GAGGCAGGACGCCCTACCTCCAAGCCTTGCTTCAGTTaGGAGACCCTGCCCCCTGCAGGGCCACTGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EAGRPTSKPCFS*ETLPPAGPLQK Trigger: TTTCTGCAGTGGCCCTGCAGGGGGCAGGGTCTCCAAACTGAAGCAAGGCTTGGAGGTAGGGCGTCCTGCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| CDS-3UTR GCA 90 bp | TGGCTCTCTTGGCACTTCCAGGGGACTGTCCCTGAAGGTCCCCTCCCAGGTCCCCGGTTGGTGACCACCTaGAGGATGGTGAAGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WLSWHFQGTVPEGPLPGPRLVTT*RMVKFS Trigger: GGAGAACTTCACCATCCTGCAGGTGGTCACCAACCG...GGGACCTGGGAGGGGACCTTCAGGGACAGTCCCCTGGAAGTGCCAAGAGAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CCA 90 bp | TCTGCTTGGCTCTCTTGGCACTTCCAGGGGACTGTCCCTGAAGGTCCCCTCCCAGCACCTGGATGTGGCTaGAGACCTGCTTCCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SAWLSWHFQGTVPEGPLPAPGCG*RPASLC Trigger: GCACAAGGAAGCAGGTCTCCAGCCACATCCAGGTGC...TGGGAGGGGACCTTCAGGGACAGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CCA 90 bp | AAAAGCCACCATTCCCGTGGCCTGGGCTCTGGCTCTCTAGGAAGGCACACACATCGACGGGCAAGCACCTaGATGTGGCTGGAGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSHHSRGLGSGSLGRHTHRRAST*MWLETC Trigger: GCAGGTCTCCAGCCACATCCAGGTGCTTGCCCGTCG...ATGTGTGTGCCTTCCTAGAGAGCCAGAGCCCAGGCCACGGGAATGGTGGCTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
||
| CDS-3UTR CCA 90 bp | AACTCTGCTTGGCTCTCTTGGCACTTCCAGGGGACTGTCCCTGAAGGTCCCCTCAGGAGACTCAAAGCCTaGCAGAGGCAGCGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NSAWLSWHFQGTVPEGPLRRLKA*QRQRRL Trigger: CAGCCTCCGCTGCCTCTGCCAGGCTTTGAGTCTCCT...GAGGGGACCTTCAGGGACAGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAGAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CCA 90 bp | GGTAAGAAGAGACCTGGCAACTCTGCTTGGCTCTCTTGGCACTTCCAGGGGACTCGACGGGCAAGCACCTaGATGTGGCTGGAGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GKKRPGNSAWLSWHFQGTRRAST*MWLETC Trigger: GCAGGTCTCCAGCCACATCCAGGTGCTTGCCCGTCG...AGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAGAGTTGCCAGGTCTCTTCTTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CCA 90 bp | CATCTCTGGGTGTGTGACCTACGTGCAATCTGTCCTCAGGCCACTAGGGTGACCTCTGTGCGGACGACATaGCAGCCATGCTCTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLWVCDLRAICPQATRVTSVRTT*QPCSAG Trigger: CCCTGCAGAGCATGGCTGCCATGTCGTCCGCACAGA...GGTCACCCTAGTGGCCTGAGGACAGATTGCACGTAGGTCACACACCCAGAGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| CDS-3UTR CCA 90 bp | AAAAGCCACCATTCCCGTGGCCTGGGCTCTGGCTCTCTAGGAAGGCACACACATAGGAGACTCAAAGCCTaGCAGAGGCAGCGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSHHSRGLGSGSLGRHTHRRLKA*QRQRRL Trigger: CAGCCTCCGCTGCCTCTGCCAGGCTTTGAGTCTCCT...ATGTGTGTGCCTTCCTAGAGAGCCAGAGCCCAGGCCACGGGAATGGTGGCTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
||
| CDS-3UTR GCA 90 bp | AACTCTGCTTGGCTCTCTTGGCACTTCCAGGGGACTGTCCCTGAAGGTCCCCTCGAGGGGACCGGTGGATaGGGTACAAATAGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NSAWLSWHFQGTVPEGPLEGTGG*GTNSGH Trigger: ATGGCCACTATTTGTACCGCATCCACCGGTCCCCTC...GAGGGGACCTTCAGGGACAGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CCA 90 bp | CATCTCTGGGTGTGTGACCTACGTGCAATCTGTCCTCAGGCCACTAGGGTGACCTACTGTGGAAGGCTGTaGCCGAGACGATCTGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: HLWVCDLRAICPQATRVTYCGRL*PRRSVR Trigger: CCGCACAGATCGTCTCGGCCACAGCCTTCCACAGTA...GGTCACCCTAGTGGCCTGAGGACAGATTGCACGTAGGTCACACACCCAGAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| CDS-3UTR CCA 90 bp | ACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGCTCCTGGTCGGAGGGTGAGGGGGTaGGCCCTGCAGGAGACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TLGLLGVEHCKIRQFAPGRRVRG*ALQETQ Trigger: TTGAGTCTCCTGCAGGGCCCACCCCCTCACCCTCCG...ACCAGGAGCAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR GCA 90 bp | AACTCTGCTTGGCTCTCTTGGCACTTCCAGGGGACTGTCCCTGAAGGTCCCCTCATGGCAGCCATGCTCTaGAGGGCCTTGTTCTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NSAWLSWHFQGTVPEGPLMAAML*RALFLA Trigger: AGCTAAGAACAAGGCCCTGCAGAGCATGGCTGCCAT...GAGGGGACCTTCAGGGACAGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAGAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| CDS-3UTR GCA 90 bp | GGTAAGAAGAGACCTGGCAACTCTGCTTGGCTCTCTTGGCACTTCCAGGGGACTCCCCATAGAAGGCGCTaGCCTCGTCATCGATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKKRPGNSAWLSWHFQGTPHRRR*PRHRCW Trigger: CCAACATCGATGACGAGGGCAGCGCCTTCTATGGGG...AGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAGAGTTGCCAGGTCTCTTCTTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR GCA 90 bp | AAAAGCCACCATTCCCGTGGCCTGGGCTCTGGCTCTCTAGGAAGGCACACACATGAGGGGACCGGTGGATaGGGTACAAATAGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSHHSRGLGSGSLGRHTHEGTGG*GTNSGH Trigger: ATGGCCACTATTTGTACCGCATCCACCGGTCCCCTC...ATGTGTGTGCCTTCCTAGAGAGCCAGAGCCCAGGCCACGGGAATGGTGGCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGCCACCATTCCCGTGGCCTGGGCTCTGGCTCTCTAGGAAGGCACACACATCGGTTGGTGACCACCTaGAGGATGGTGAAGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSHHSRGLGSGSLGRHTHRLVTT*RMVKFS Trigger: GGAGAACTTCACCATCCTGCAGGTGGTCACCAACCG...ATGTGTGTGCCTTCCTAGAGAGCCAGAGCCCAGGCCACGGGAATGGTGGCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGCCACTGCAGAAAGAACAAAGCCACCCGAGTAGCTCTTACCCAGTCTCCCCTGCATCATTGTCGATaGGCTTGTCCAGTGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGHCRKNKATRVALTQSPLHHCR*ACPVPG Trigger: GCCAGGCACTGGACAAGCCCATCGACAATGATGCAG...GGGAGACTGGGTAAGAGCTACTCGGGTGGCTTTGTTCTTTCTGCAGTGGCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| CDS-3UTR CCA 90 bp | GGTAAGAAGAGACCTGGCAACTCTGCTTGGCTCTCTTGGCACTTCCAGGGGACTGCACCTGGATGTGGCTaGAGACCTGCTTCCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GKKRPGNSAWLSWHFQGTAPGCG*RPASLC Trigger: GCACAAGGAAGCAGGTCTCCAGCCACATCCAGGTGC...AGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAGAGTTGCCAGGTCTCTTCTTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CCA 90 bp | AAAAGCCACCATTCCCGTGGCCTGGGCTCTGGCTCTCTAGGAAGGCACACACATTGGGATGTTCCAGGTTaGCCTGGCAAAGCTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSHHSRGLGSGSLGRHTHWDVPG*PGKAPC Trigger: GCAAGGAGCTTTGCCAGGCCAACCTGGAACATCCCA...ATGTGTGTGCCTTCCTAGAGAGCCAGAGCCCAGGCCACGGGAATGGTGGCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
||
| 3UTR CAA 72 bp | TCTGGTTCCTTGGCTGTCCTGGAGTACTTTGGGCCATaGCTTCCAGCTTGCTTCCTGATGCCCCCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SGSLAVLEYFGP*LPACFLMPPSP Trigger: GGGAGAAGGGGGCATCAGGAAGCAAGCTGGAAGCAATGGCCCAAAGTACTCCAGGACAGCCAAGGAACCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| CDS-3UTR GCA 90 bp | GCAGGGCCACTGCAGAAAGAACAAAGCCACCCGAGTAGCTCTTACCCAGTCTCCGAGCTTGATATGGCGTaGGATCAGCTCATTCCGACC | + |
|
Preference number: 4 (lower is better) Translates to: AGPLQKEQSHPSSSYPVSELDMA*DQLIPT Trigger: GGTCGGAATGAGCTGATCGCACGCCATATCAAGCTC...GGAGACTGGGTAAGAGCTACTCGGGTGGCTTTGTTCTTTCTGCAGTGGCCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| CDS-3UTR CCA 90 bp | ACACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGCTCCTGAGGAGACTCAAAGCCTaGCAGAGGCAGCGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPWVYWGLSTARSGSLLLRRLKA*QRQRRL Trigger: CAGCCTCCGCTGCCTCTGCCAGGCTTTGAGTCTCCT...CAGGAGCAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CCA 90 bp | GAGGGAATTATAGCTGTGCAGCCAGGTGCCTGGCTGGGCATATTAGTTAGCTACGGCTCTCGTACTGGCTaGAGACCCCATAGAAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: EGIIAVQPGAWLGILVSYGSRTG*RPHRRR Trigger: GCGCCTTCTATGGGGTCTCCAGCCAGTACGAGAGCC...GTAGCTAACTAATATGCCCAGCCAGGCACCTGGCTGCACAGCTATAATTCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
||
| 3UTR CAA 72 bp | TTCCAGCAGCTGAGAAGGGTCTTGAGCTTTGGTGTCTaGGTGATATGCCTGGCTGAGTCCACCGGGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FQQLRRVLSFGV*VICLAESTGVL Trigger: CAGAACCCCGGTGGACTCAGCCAGGCATATCACCAAGACACCAAAGCTCAAGACCCTTCTCAGCTGCTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| 3UTR CAA 72 bp | GCACACCAAAGTCAGGCTAGACTGACTCCAGAGCCCTaGTCCCTCACCTCTGTAGCATCACCACAATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AHQSQARLTPEP*SLTSVASPQCC Trigger: GCAGCATTGTGGTGATGCTACAGAGGTGAGGGACAAGGGCTCTGGAGTCAGTCTAGCCTGACTTTGGTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| CDS-3UTR TCA 90 bp | GGGCCACTGCAGAAAGAACAAAGCCACCCGAGTAGCTCTTACCCAGTCTCCCTCTTGGGCTTGACTGGCTaGTGTGCACAAACAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GPLQKEQSHPSSSYPVSLLGLTG*CAQTGV Trigger: AACACCTGTTTGTGCACATCAGCCAGTCAAGCCCAA...GAGGGAGACTGGGTAAGAGCTACTCGGGTGGCTTTGTTCTTTCTGCAGTGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| CDS-3UTR TCA 90 bp | CATCTCTGGGTGTGTGACCTACGTGCAATCTGTCCTCAGGCCACTAGGGTGACCCACTTGCTTGCCAAATaGGCAGACCTTCGTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HLWVCDLRAICPQATRVTHLLAK*ADLRRA Trigger: TGCTCTACGAAGGTCTGCTCATTTGGCAAGCAAGTG...GGTCACCCTAGTGGCCTGAGGACAGATTGCACGTAGGTCACACACCCAGAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| CDS-3UTR GCA 90 bp | AAAAGCCACCATTCCCGTGGCCTGGGCTCTGGCTCTCTAGGAAGGCACACACATGCTCCATACACCCTCTaGATCATTGTCGATGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSHHSRGLGSGSLGRHTHAPYTL*IIVDGL Trigger: AAGCCCATCGACAATGATGCAGAGGGTGTATGGAGC...ATGTGTGTGCCTTCCTAGAGAGCCAGAGCCCAGGCCACGGGAATGGTGGCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
||
| CDS-3UTR GCA 90 bp | CTTGTCCCTCACCTCTGTAGCATCACCACAATGCTGCCCTGCCCATTTCTGCATATGTGGCTGGAGACCTaGTTCCTTGTGCGCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVPHLCSITTMLPCPFLHMWLET*FLVRVF Trigger: GAAGACGCGCACAAGGAAGCAGGTCTCCAGCCACAT...ATGCAGAAATGGGCAGGGCAGCATTGTGGTGATGCTACAGAGGTGAGGGACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| CDS-3UTR GCA 90 bp | ACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGCTCCTGGTCCCCATAGAAGGCGCTaGCCTCGTCATCGATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLGLLGVEHCKIRQFAPGPHRRR*PRHRCW Trigger: CCAACATCGATGACGAGGGCAGCGCCTTCTATGGGG...ACCAGGAGCAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR GCA 90 bp | GAGGGAATTATAGCTGTGCAGCCAGGTGCCTGGCTGGGCATATTAGTTAGCTACCCCCATAGAAGGCGCTaGCCTCGTCATCGATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGIIAVQPGAWLGILVSYPHRRR*PRHRCW Trigger: CCAACATCGATGACGAGGGCAGCGCCTTCTATGGGG...GTAGCTAACTAATATGCCCAGCCAGGCACCTGGCTGCACAGCTATAATTCCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
||
| 3UTR CAA 72 bp | AGCAGGAGTGTGAGGTTCCAGCAGCTGAGAAGGGTCTaGAGCTTTGGTGTCTTGGTGATATGCCTGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRSVRFQQLRRV*SFGVLVICLAE Trigger: CTCAGCCAGGCATATCACCAAGACACCAAAGCTCAAGACCCTTCTCAGCTGCTGGAACCTCACACTCCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| CDS-3UTR TCA 90 bp | GGTAAGAAGAGACCTGGCAACTCTGCTTGGCTCTCTTGGCACTTCCAGGGGACTTTGGGCTTGACTGGCTaGTGTGCACAAACAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GKKRPGNSAWLSWHFQGTLGLTG*CAQTGV Trigger: AACACCTGTTTGTGCACATCAGCCAGTCAAGCCCAA...AGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAGAGTTGCCAGGTCTCTTCTTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR GCA 90 bp | GAGGGAATTATAGCTGTGCAGCCAGGTGCCTGGCTGGGCATATTAGTTAGCTACATGTGGCTGGAGACCTaGTTCCTTGTGCGCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EGIIAVQPGAWLGILVSYMWLET*FLVRVF Trigger: GAAGACGCGCACAAGGAAGCAGGTCTCCAGCCACAT...GTAGCTAACTAATATGCCCAGCCAGGCACCTGGCTGCACAGCTATAATTCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
||
| CDS-3UTR GCA 90 bp | CTTGTCCCTCACCTCTGTAGCATCACCACAATGCTGCCCTGCCCATTTCTGCATGGCCTTGTTCTTAGCTaGCTGGTCCTTGAGTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVPHLCSITTMLPCPFLHGLVLS*LVLEFG Trigger: GCCAAACTCAAGGACCAGGCAGCTAAGAACAAGGCC...ATGCAGAAATGGGCAGGGCAGCATTGTGGTGATGCTACAGAGGTGAGGGACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| CDS-3UTR GCA 90 bp | GTGACCAGCAGCAGGAGTGTGAGGTTCCAGCAGCTGAGAAGGGTCTTGAGCTTTCCTGGCAAAGCTCCTTaGCAAAACCCTGAGATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VTSSRSVRFQQLRRVLSFPGKAP*QNPEIA Trigger: AGCAATCTCAGGGTTTTGGCAAGGAGCTTTGCCAGG...AAAGCTCAAGACCCTTCTCAGCTGCTGGAACCTCACACTCCTGCTGCTGGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| CDS-3UTR GCA 90 bp | ACACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGCTCCTGCGGTTGGTGACCACCTaGAGGATGGTGAAGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPWVYWGLSTARSGSLLLRLVTT*RMVKFS Trigger: GGAGAACTTCACCATCCTGCAGGTGGTCACCAACCG...CAGGAGCAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR GCA 90 bp | CTGGTAAGAAGAGACCTGGCAACTCTGCTTGGCTCTCTTGGCACTTCCAGGGGACCTGGCAAAGCTCCTTaGCAAAACTTGAGTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVRRDLATLLGSLGTSRGPGKAP*QNLSLA Trigger: GGCCAAACTCAAGTTTTGGCAAGGAGCTTTGCCAGG...TCCCCTGGAAGTGCCAAGAGAGCCAAGCAGAGTTGCCAGGTCTCTTCTTACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112157.4 |
||
| CDS-3UTR CCA 90 bp | GAGGGAATTATAGCTGTGCAGCCAGGTGCCTGGCTGGGCATATTAGTTAGCTACCTGCATCATTGTCGATaGGCTTGTCCAGTGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: EGIIAVQPGAWLGILVSYLHHCR*ACPVPG Trigger: GCCAGGCACTGGACAAGCCCATCGACAATGATGCAG...GTAGCTAACTAATATGCCCAGCCAGGCACCTGGCTGCACAGCTATAATTCCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
||
| CDS-3UTR CCA 90 bp | ACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGCTCCTGGTTGGGATGTTCCAGGTTaGCCTGGCAAAGCTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLGLLGVEHCKIRQFAPGWDVPG*PGKAPC Trigger: GCAAGGAGCTTTGCCAGGCCAACCTGGAACATCCCA...ACCAGGAGCAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CCA 90 bp | ATTTCAGAGATTAGGCTTCACTGTGTAGTCCATGATGATCTCGTTCTTCTCCTGCGGAGGGTGAGGGGGTaGGCCCTGCAGGAGACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ISEIRLHCVVHDDLVLLLRRVRG*ALQETQ Trigger: TTGAGTCTCCTGCAGGGCCCACCCCCTCACCCTCCG...CAGGAGAAGAACGAGATCATCATGGACTACACAGTGAAGCCTAATCTCTGAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
||
| CDS-3UTR TCA 90 bp | ACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGCTCCTGGTACTGTAGCTTGGGCTTaGCTGGCTGATGTGCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: TLGLLGVEHCKIRQFAPGTVAWA*LADVHK Trigger: TTTGTGCACATCAGCCAGTCAAGCCCAAGCTACAGT...ACCAGGAGCAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR TCA 90 bp | ACACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGCTCCTGACTGTAGCTTGGGCTTaGCTGGCTGATGTGCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: TPWVYWGLSTARSGSLLLTVAWA*LADVHK Trigger: TTTGTGCACATCAGCCAGTCAAGCCCAAGCTACAGT...CAGGAGCAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR TCA 90 bp | ACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGCTCCTGGTCACTTGCTTGCCAAATaGGCAGACCTTCGTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLGLLGVEHCKIRQFAPGHLLAK*ADLRRA Trigger: TGCTCTACGAAGGTCTGCTCATTTGGCAAGCAAGTG...ACCAGGAGCAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR TCA 90 bp | GAGGGAATTATAGCTGTGCAGCCAGGTGCCTGGCTGGGCATATTAGTTAGCTACCACTTGCTTGCCAAATaGGCAGACCTTCGTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EGIIAVQPGAWLGILVSYHLLAK*ADLRRA Trigger: TGCTCTACGAAGGTCTGCTCATTTGGCAAGCAAGTG...GTAGCTAACTAATATGCCCAGCCAGGCACCTGGCTGCACAGCTATAATTCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
||
| CDS-3UTR GCA 90 bp | ACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGCTCCTGGTGCTCCATACACCCTCTaGATCATTGTCGATGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLGLLGVEHCKIRQFAPGAPYTL*IIVDGL Trigger: AAGCCCATCGACAATGATGCAGAGGGTGTATGGAGC...ACCAGGAGCAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR GCA 90 bp | ACACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGCTCCTGGCTCCATACACCCTCTaGATCATTGTCGATGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPWVYWGLSTARSGSLLLAPYTL*IIVDGL Trigger: AAGCCCATCGACAATGATGCAGAGGGTGTATGGAGC...CAGGAGCAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR GCA 90 bp | TACTTGACACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGGAGGGGACCGGTGGATaGGGTACAAATAGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YLTPWVYWGLSTARSGSLEGTGG*GTNSGH Trigger: ATGGCCACTATTTGTACCGCATCCACCGGTCCCCTC...CAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGTCAAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR GCA 90 bp | AACTCTGCTTGGCTCTCTTGGCACTTCCAGGGGACTGTCCCTGAAGGTCCCCTCAACTTCGAAGACATATaGAATACACAGCAAGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NSAWLSWHFQGTVPEGPLNFEDI*NTQQGL Trigger: GAGACCTTGCTGTGTATTGCATATGTCTTCGAAGTT...GAGGGGACCTTCAGGGACAGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CCA 90 bp | TACTTGACACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGCTGCATCATTGTCGATaGGCTTGTCCAGTGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: YLTPWVYWGLSTARSGSLLHHCR*ACPVPG Trigger: GCCAGGCACTGGACAAGCCCATCGACAATGATGCAG...CAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGTCAAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CCA 90 bp | TACTTGACACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGTGGGATGTTCCAGGTTaGCCTGGCAAAGCTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YLTPWVYWGLSTARSGSLWDVPG*PGKAPC Trigger: GCAAGGAGCTTTGCCAGGCCAACCTGGAACATCCCA...CAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGTCAAGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR GCA 90 bp | ATACTTGACACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTATGTGGCTGGAGACCTaGTTCCTTGTGCGCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILDTLGLLGVEHCKIRQFMWLET*FLVRVF Trigger: GAAGACGCGCACAAGGAAGCAGGTCTCCAGCCACAT...AAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGTCAAGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR GCA 90 bp | ATACTTGACACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGAGCTTGATATGGCGTaGGATCAGCTCATTCCGACC | + |
|
Preference number: 4 (lower is better) Translates to: ILDTLGLLGVEHCKIRQFELDMA*DQLIPT Trigger: GGTCGGAATGAGCTGATCGCACGCCATATCAAGCTC...AAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGTCAAGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CCA 90 bp | TACTTGACACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGGTCCTGAGCTTGATATaGCGTGCGATCAGCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: YLTPWVYWGLSTARSGSLVLSLI*RAISSF Trigger: GAATGAGCTGATCGCACGCCATATCAAGCTCAGGAC...CAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGTCAAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CCA 90 bp | ATTTCAGAGATTAGGCTTCACTGTGTAGTCCATGATGATCTCGTTCTTCTCCTGGCACCTGGATGTGGCTaGAGACCTGCTTCCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISEIRLHCVVHDDLVLLLAPGCG*RPASLC Trigger: GCACAAGGAAGCAGGTCTCCAGCCACATCCAGGTGC...CAGGAGAAGAACGAGATCATCATGGACTACACAGTGAAGCCTAATCTCTGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTTGTATCTTTCTTCCTGAGGCTCCAGACTATTAGAACTGGCTCCAACTGGTTGTTCTTAGCTGCCTaGTCCTTGAGTTTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QVVSFFLRLQTIRTGSNWLFLAA*SLSLAW Trigger: CCAGGCCAAACTCAAGGACCAGGCAGCTAAGAACAA...CCAGTTGGAGCCAGTTCTAATAGTCTGGAGCCTCAGGAAGAAAGATACAACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| 3UTR CAA 72 bp | CAGGCCAAACTAGCTCCTCTGAAAATACTTGACACCTaGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QAKLAPLKILDT*GLLGVEHCKIR Trigger: CCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGTCAAGTATTTTCAGAGGAGCTAGTTTGGCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| CDS-3UTR TCA 90 bp | ATTATAGCTGTGCAGCCAGGTGCCTGGCTGGGCATATTAGTTAGCTACATTCTATTGGGCTTGACTGGCTaGTGTGCACAAACAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IIAVQPGAWLGILVSYILLGLTG*CAQTGV Trigger: AACACCTGTTTGTGCACATCAGCCAGTCAAGCCCAA...TAGAATGTAGCTAACTAATATGCCCAGCCAGGCACCTGGCTGCACAGCTATAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
||
| CDS-3UTR GCA 90 bp | ATTATAGCTGTGCAGCCAGGTGCCTGGCTGGGCATATTAGTTAGCTACATTCTACCTGGCAAAGCTCCTTaGCAAAACTTGAGTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IIAVQPGAWLGILVSYILPGKAP*QNLSLA Trigger: GGCCAAACTCAAGTTTTGGCAAGGAGCTTTGCCAGG...TAGAATGTAGCTAACTAATATGCCCAGCCAGGCACCTGGCTGCACAGCTATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
||
| CDS-3UTR CCA 90 bp | ATACTTGACACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGTCCTGAGCTTGATATaGCGTGCGATCAGCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: ILDTLGLLGVEHCKIRQFVLSLI*RAISSF Trigger: GAATGAGCTGATCGCACGCCATATCAAGCTCAGGAC...AAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGTCAAGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| 3UTR CAA 72 bp | CTAGCTCCTCTGAAAATACTTGACACCTTGGGTTTATaGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LAPLKILDTLGL*GVEHCKIRQFA Trigger: AGCAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGTCAAGTATTTTCAGAGGAGCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| CDS-3UTR GCA 90 bp | TACTTGACACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGAACTTCGAAGACATATaGAATACACAGCAAGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YLTPWVYWGLSTARSGSLNFEDI*NTQQGL Trigger: GAGACCTTGCTGTGTATTGCATATGTCTTCGAAGTT...CAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGTCAAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR GCA 90 bp | ATTTCAGAGATTAGGCTTCACTGTGTAGTCCATGATGATCTCGTTCTTCTCCTGAACTTCGAAGACATATaGAATACACAGCAAGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISEIRLHCVVHDDLVLLLNFEDI*NTQQGL Trigger: GAGACCTTGCTGTGTATTGCATATGTCTTCGAAGTT...CAGGAGAAGAACGAGATCATCATGGACTACACAGTGAAGCCTAATCTCTGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTTGGCTCTCTTGGCACTTCCAGGGGACTGTCCCTGAAGGTCCCCTCCCAGTGGAGACCTGCTTCCTaGTGCGCGTCTTCCCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLGSLGTSRGLSLKVPSQWRPAS*CASSLS Trigger: GGACAGGGAAGACGCGCACAAGGAAGCAGGTCTCCA...CTGGGAGGGGACCTTCAGGGACAGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CAA 90 bp | TCTGCTTGGCTCTCTTGGCACTTCCAGGGGACTGTCCCTGAAGGTCCCCTCCCATCATTGTCGATGGGCTaGTCCAGTGCCTGGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SAWLSWHFQGTVPEGPLPSLSMG*SSAWLP Trigger: GGGCAGCCAGGCACTGGACAAGCCCATCGACAATGA...TGGGAGGGGACCTTCAGGGACAGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CAA 90 bp | TGGCTCTCTTGGCACTTCCAGGGGACTGTCCCTGAAGGTCCCCTCCCAGGTCCCTCCAACATCCAGAGCTaGGAGCTAGCTATGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: WLSWHFQGTVPEGPLPGPSNIQS*ELAMLR Trigger: CCGCAGCATAGCTAGCTCCAAGCTCTGGATGTTGGA...GGGACCTGGGAGGGGACCTTCAGGGACAGTCCCCTGGAAGTGCCAAGAGAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CAA 90 bp | CTGCTTGGCTCTCTTGGCACTTCCAGGGGACTGTCCCTGAAGGTCCCCTCCCAGTCCAACATCCAGAGCTaGGAGCTAGCTATGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LLGSLGTSRGLSLKVPSQSNIQS*ELAMLR Trigger: CCGCAGCATAGCTAGCTCCAAGCTCTGGATGTTGGA...CTGGGAGGGGACCTTCAGGGACAGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CAA 90 bp | AAAAGCCACCATTCCCGTGGCCTGGGCTCTGGCTCTCTAGGAAGGCACACACATTGGAGACCTGCTTCCTaGTGCGCGTCTTCCCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSHHSRGLGSGSLGRHTHWRPAS*CASSLS Trigger: GGACAGGGAAGACGCGCACAAGGAAGCAGGTCTCCA...ATGTGTGTGCCTTCCTAGAGAGCCAGAGCCCAGGCCACGGGAATGGTGGCTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
||
| CDS-3UTR CAA 90 bp | AACTCTGCTTGGCTCTCTTGGCACTTCCAGGGGACTGTCCCTGAAGGTCCCCTCTCCTGTGTGTCTCGGTaGGTGACCACCTGCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: NSAWLSWHFQGTVPEGPLSCVSR*VTTCRM Trigger: CATCCTGCAGGTGGTCACCAACCGAGACACACAGGA...GAGGGGACCTTCAGGGACAGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAGAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CAA 90 bp | CTGCTTGGCTCTCTTGGCACTTCCAGGGGACTGTCCCTGAAGGTCCCCTCCCAGTTCCGACCATACATCTaGCCTTCCTCCGTCAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: LLGSLGTSRGLSLKVPSQFRPYI*PSSVRI Trigger: TATCCTGACGGAGGAAGGCAAGATGTATGGTCGGAA...CTGGGAGGGGACCTTCAGGGACAGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CAA 90 bp | CAGGGCCACTGCAGAAAGAACAAAGCCACCCGAGTAGCTCTTACCCAGTCTCCCTCCTGTGTGTCTCGGTaGGTGACCACCTGCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: QGHCRKNKATRVALTQSPSCVSR*VTTCRM Trigger: CATCCTGCAGGTGGTCACCAACCGAGACACACAGGA...GGGAGACTGGGTAAGAGCTACTCGGGTGGCTTTGTTCTTTCTGCAGTGGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| CDS-3UTR CAA 90 bp | GTCTTGAGCTTTGGTGTCTTGGTGATATGCCTGGCTGAGTCCACCGGGGTTCTGATGCTCTGCAGGGCCTaGTTCTTAGCTGCCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLSFGVLVICLAESTGVLMLCRA*FLAAWS Trigger: GGACCAGGCAGCTAAGAACAAGGCCCTGCAGAGCAT...CAGAACCCCGGTGGACTCAGCCAGGCATATCACCAAGACACCAAAGCTCAAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| CDS-3UTR CAA 90 bp | GGGCCACTGCAGAAAGAACAAAGCCACCCGAGTAGCTCTTACCCAGTCTCCCTCCCCTCGTCATCGATGTaGGTATTGAGGTCTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPLQKEQSHPSSSYPVSLPSSSM*VLRSAQ Trigger: CTGGGCAGACCTCAATACCAACATCGATGACGAGGG...GAGGGAGACTGGGTAAGAGCTACTCGGGTGGCTTTGTTCTTTCTGCAGTGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| CDS-3UTR CAA 90 bp | AAAAGCCACCATTCCCGTGGCCTGGGCTCTGGCTCTCTAGGAAGGCACACACATCCCTCGTCATCGATGTaGGTATTGAGGTCTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KSHHSRGLGSGSLGRHTHPSSSM*VLRSAQ Trigger: CTGGGCAGACCTCAATACCAACATCGATGACGAGGG...ATGTGTGTGCCTTCCTAGAGAGCCAGAGCCCAGGCCACGGGAATGGTGGCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTCAGTTTGGAGACCCTGCCCCCTGCAGGGCCACTGCAGAAAGAACAAAGCACACCCTCTGCATCATaGTCGATGGGCTTGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CFSLETLPPAGPLQKEQSTPSAS*SMGLSS Trigger: ACTGGACAAGCCCATCGACAATGATGCAGAGGGTGT...GCTTTGTTCTTTCTGCAGTGGCCCTGCAGGGGGCAGGGTCTCCAAACTGAAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
||
| CDS-3UTR CAA 90 bp | ACACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGCTCCTGTGGAGACCTGCTTCCTaGTGCGCGTCTTCCCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TPWVYWGLSTARSGSLLLWRPAS*CASSLS Trigger: GGACAGGGAAGACGCGCACAAGGAAGCAGGTCTCCA...CAGGAGCAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CAA 90 bp | CTGCTTGGCTCTCTTGGCACTTCCAGGGGACTGTCCCTGAAGGTCCCCTCCCAGGACAGGGTAGGTGTTTaGAGAGAAAGGTTTCACATC | + |
|
Preference number: 5 (lower is better) Translates to: LLGSLGTSRGLSLKVPSQDRVGV*RERFHI Trigger: GATGTGAAACCTTTCTCTCAAAACACCTACCCTGTC...CTGGGAGGGGACCTTCAGGGACAGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CAA 90 bp | GGTAAGAAGAGACCTGGCAACTCTGCTTGGCTCTCTTGGCACTTCCAGGGGACTACACCCTCTGCATCATaGTCGATGGGCTTGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GKKRPGNSAWLSWHFQGTTPSAS*SMGLSS Trigger: ACTGGACAAGCCCATCGACAATGATGCAGAGGGTGT...AGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAGAGTTGCCAGGTCTCTTCTTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
||
| CDS-3UTR CAA 90 bp | AAAAGCCACCATTCCCGTGGCCTGGGCTCTGGCTCTCTAGGAAGGCACACACATTTCCGACCATACATCTaGCCTTCCTCCGTCAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: KSHHSRGLGSGSLGRHTHFRPYI*PSSVRI Trigger: TATCCTGACGGAGGAAGGCAAGATGTATGGTCGGAA...ATGTGTGTGCCTTCCTAGAGAGCCAGAGCCCAGGCCACGGGAATGGTGGCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
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| CDS-3UTR CAA 90 bp | GGTAAGAAGAGACCTGGCAACTCTGCTTGGCTCTCTTGGCACTTCCAGGGGACTTTCCGACCATACATCTaGCCTTCCTCCGTCAGGATA | + |
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Preference number: 5 (lower is better) Translates to: GKKRPGNSAWLSWHFQGTFRPYI*PSSVRI Trigger: TATCCTGACGGAGGAAGGCAAGATGTATGGTCGGAA...AGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAGAGTTGCCAGGTCTCTTCTTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
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| CDS-3UTR CAA 90 bp | TCTGGGCTCACACAGGCCAAACTAGCTCCTCTGAAAATACTTGACACCTTGGGTGTGGGATGTTCCAGGTaGGCCTGGCAAAGCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: SGLTQAKLAPLKILDTLGVGCSR*AWQSSL Trigger: CAAGGAGCTTTGCCAGGCCAACCTGGAACATCCCAC...ACCCAAGGTGTCAAGTATTTTCAGAGGAGCTAGTTTGGCCTGTGTGAGCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| CDS-3UTR CAA 90 bp | CTGGTAAGAAGAGACCTGGCAACTCTGCTTGGCTCTCTTGGCACTTCCAGGGGACGTTCAAATAGCTCCTaGAGGCCTCCCTTCTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: LVRRDLATLLGSLGTSRGRSNSS*RPPFFS Trigger: AGAGAAGAAGGGAGGCCTCAAGGAGCTATTTGAACG...TCCCCTGGAAGTGCCAAGAGAGCCAAGCAGAGTTGCCAGGTCTCTTCTTACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
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| CDS-3UTR CAA 90 bp | ATACTTGACACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTTCATTGTCGATGGGCTaGTCCAGTGCCTGGCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: ILDTLGLLGVEHCKIRQFSLSMG*SSAWLP Trigger: GGGCAGCCAGGCACTGGACAAGCCCATCGACAATGA...AAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGTCAAGTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
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| CDS-3UTR CAA 90 bp | CAGGGCCACTGCAGAAAGAACAAAGCCACCCGAGTAGCTCTTACCCAGTCTCCCGAACTTGTCATAGATTaGGCGGATGTCCACAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: QGHCRKNKATRVALTQSPELVID*ADVHSF Trigger: GAAACTGTGGACATCCGCCAAATCTATGACAAGTTC...GGGAGACTGGGTAAGAGCTACTCGGGTGGCTTTGTTCTTTCTGCAGTGGCCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| CDS-3UTR CAA 90 bp | ACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGCTCCTGGTGCCTGGCAAAGCTCCTaGCCAAAACTTGAGTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: TLGLLGVEHCKIRQFAPGAWQSS*PKLEFG Trigger: GCCAAACTCAAGTTTTGGCAAGGAGCTTTGCCAGGC...ACCAGGAGCAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112157.4 |
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| CDS CCA 90 bp | GTTTTGAGAGAAAGGTTTCACATCGTGGGATGTTCCAGGTTGGCCTaGCAAAGCTCCTTGCCAAAACTTGAGTTTGGCCTGGATCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: VLRERFHIVGCSRLA*QSSLPKLEFGLDLP Trigger: CGGGAGATCCAGGCCAAACTCAAGTTTTGGCAAGGAGCTTTGCCAGGCCAACCTGGAACATCCCACGATGTGAAACCTTTCTCTCAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112157.4 ENSMUST00000130454.8 |
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| CDS-3UTR CAA 90 bp | ATACTTGACACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGTGGGATGTTCCAGGTaGGCCTGGCAAAGCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: ILDTLGLLGVEHCKIRQFVGCSR*AWQSSL Trigger: CAAGGAGCTTTGCCAGGCCAACCTGGAACATCCCAC...AAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGTCAAGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
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| CDS-3UTR CAA 90 bp | GGTAAGAAGAGACCTGGCAACTCTGCTTGGCTCTCTTGGCACTTCCAGGGGACTGAACTTGTCATAGATTaGGCGGATGTCCACAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: GKKRPGNSAWLSWHFQGTELVID*ADVHSF Trigger: GAAACTGTGGACATCCGCCAAATCTATGACAAGTTC...AGTCCCCTGGAAGTGCCAAGAGAGCCAAGCAGAGTTGCCAGGTCTCTTCTTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
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| CDS-3UTR CAA 90 bp | GAGGGAATTATAGCTGTGCAGCCAGGTGCCTGGCTGGGCATATTAGTTAGCTACCGTTCAAATAGCTCCTaGAGGCCTCCCTTCTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: EGIIAVQPGAWLGILVSYRSNSS*RPPFFS Trigger: AGAGAAGAAGGGAGGCCTCAAGGAGCTATTTGAACG...GTAGCTAACTAATATGCCCAGCCAGGCACCTGGCTGCACAGCTATAATTCCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
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| CDS-3UTR CAA 90 bp | ATTATAGCTGTGCAGCCAGGTGCCTGGCTGGGCATATTAGTTAGCTACATTCTATCCTGTGTGTCTCGGTaGGTGACCACCTGCAGGATG | + |
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Preference number: 5 (lower is better) Translates to: IIAVQPGAWLGILVSYILSCVSR*VTTCRM Trigger: CATCCTGCAGGTGGTCACCAACCGAGACACACAGGA...TAGAATGTAGCTAACTAATATGCCCAGCCAGGCACCTGGCTGCACAGCTATAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
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| CDS-3UTR CAA 90 bp | ATTTCAGAGATTAGGCTTCACTGTGTAGTCCATGATGATCTCGTTCTTCTCCTGTCATTGTCGATGGGCTaGTCCAGTGCCTGGCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: ISEIRLHCVVHDDLVLLLSLSMG*SSAWLP Trigger: GGGCAGCCAGGCACTGGACAAGCCCATCGACAATGA...CAGGAGAAGAACGAGATCATCATGGACTACACAGTGAAGCCTAATCTCTGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
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| CDS-3UTR CAA 90 bp | ATTATAGCTGTGCAGCCAGGTGCCTGGCTGGGCATATTAGTTAGCTACATTCTATCCAACATCCAGAGCTaGGAGCTAGCTATGCTGCGG | + |
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Preference number: 5 (lower is better) Translates to: IIAVQPGAWLGILVSYILSNIQS*ELAMLR Trigger: CCGCAGCATAGCTAGCTCCAAGCTCTGGATGTTGGA...TAGAATGTAGCTAACTAATATGCCCAGCCAGGCACCTGGCTGCACAGCTATAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
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| CDS-3UTR CAA 90 bp | TCTGGGCTCACACAGGCCAAACTAGCTCCTCTGAAAATACTTGACACCTTGGGTCGTTCAAATAGCTCCTaGAGGCCTCCCTTCTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: SGLTQAKLAPLKILDTLGRSNSS*RPPFFS Trigger: AGAGAAGAAGGGAGGCCTCAAGGAGCTATTTGAACG...ACCCAAGGTGTCAAGTATTTTCAGAGGAGCTAGTTTGGCCTGTGTGAGCCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| CDS-3UTR CAA 90 bp | TCCAACAACTATGTTGCAGCCACACCTAAACCCAGCCCTGTTTGCAGGGATGGATCATCGATGTTGGTATaGAGGTCTGCCCAGAACTTC | + |
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Preference number: 5 (lower is better) Translates to: SNNYVAATPKPSPVCRDGSSMLV*RSAQNF Trigger: GAAGTTCTGGGCAGACCTCAATACCAACATCGATGA...TCCATCCCTGCAAACAGGGCTGGGTTTAGGTGTGGCTGCAACATAGTTGTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| CDS-3UTR CAA 90 bp | ACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTGCTCCTGGTTCATCGATGTTGGTATaGAGGTCTGCCCAGAACTTC | + |
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Preference number: 5 (lower is better) Translates to: TLGLLGVEHCKIRQFAPGSSMLV*RSAQNF Trigger: GAAGTTCTGGGCAGACCTCAATACCAACATCGATGA...ACCAGGAGCAAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
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| CDS-3UTR CAA 90 bp | GAGGGAATTATAGCTGTGCAGCCAGGTGCCTGGCTGGGCATATTAGTTAGCTACTCATCGATGTTGGTATaGAGGTCTGCCCAGAACTTC | + |
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Preference number: 5 (lower is better) Translates to: EGIIAVQPGAWLGILVSYSSMLV*RSAQNF Trigger: GAAGTTCTGGGCAGACCTCAATACCAACATCGATGA...GTAGCTAACTAATATGCCCAGCCAGGCACCTGGCTGCACAGCTATAATTCCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
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| CDS-3UTR CAA 90 bp | ATACTTGACACCTTGGGTTTATTGGGGGTTGAGCACTGCAAGATCAGGCAGTTTCCCTCGTCATCGATGTaGGTATTGAGGTCTGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: ILDTLGLLGVEHCKIRQFPSSSM*VLRSAQ Trigger: CTGGGCAGACCTCAATACCAACATCGATGACGAGGG...AAACTGCCTGATCTTGCAGTGCTCAACCCCCAATAAACCCAAGGTGTCAAGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 |
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| CDS-3UTR CAA 90 bp | ATTTCAGAGATTAGGCTTCACTGTGTAGTCCATGATGATCTCGTTCTTCTCCTGGTGGGATGTTCCAGGTaGGCCTGGCAAAGCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: ISEIRLHCVVHDDLVLLLVGCSR*AWQSSL Trigger: CAAGGAGCTTTGCCAGGCCAACCTGGAACATCCCAC...CAGGAGAAGAACGAGATCATCATGGACTACACAGTGAAGCCTAATCTCTGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
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| CDS-3UTR CAA 90 bp | TCCAACAACTATGTTGCAGCCACACCTAAACCCAGCCCTGTTTGCAGGGATGGAGACAGGGTAGGTGTTTaGAGAGAAAGGTTTCACATC | + |
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Preference number: 5 (lower is better) Translates to: SNNYVAATPKPSPVCRDGDRVGV*RERFHI Trigger: GATGTGAAACCTTTCTCTCAAAACACCTACCCTGTC...TCCATCCCTGCAAACAGGGCTGGGTTTAGGTGTGGCTGCAACATAGTTGTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| CDS-3UTR CAA 90 bp | GAGGGAATTATAGCTGTGCAGCCAGGTGCCTGGCTGGGCATATTAGTTAGCTACGACAGGGTAGGTGTTTaGAGAGAAAGGTTTCACATC | + |
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Preference number: 5 (lower is better) Translates to: EGIIAVQPGAWLGILVSYDRVGV*RERFHI Trigger: GATGTGAAACCTTTCTCTCAAAACACCTACCCTGTC...GTAGCTAACTAATATGCCCAGCCAGGCACCTGGCTGCACAGCTATAATTCCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
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| CDS-3UTR CAA 90 bp | ATTTCAGAGATTAGGCTTCACTGTGTAGTCCATGATGATCTCGTTCTTCTCCTGGCCTGGCAAAGCTCCTaGCCAAAACTTGAGTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: ISEIRLHCVVHDDLVLLLAWQSS*PKLEFG Trigger: GCCAAACTCAAGTTTTGGCAAGGAGCTTTGCCAGGC...CAGGAGAAGAACGAGATCATCATGGACTACACAGTGAAGCCTAATCTCTGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
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| CDS-3UTR CAA 90 bp | ATTATAGCTGTGCAGCCAGGTGCCTGGCTGGGCATATTAGTTAGCTACATTCTAGAACTTGTCATAGATTaGGCGGATGTCCACAGTTTC | + |
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Preference number: 5 (lower is better) Translates to: IIAVQPGAWLGILVSYILELVID*ADVHSF Trigger: GAAACTGTGGACATCCGCCAAATCTATGACAAGTTC...TAGAATGTAGCTAACTAATATGCCCAGCCAGGCACCTGGCTGCACAGCTATAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130454.8 |
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| CDS GCA 72 bp | AACATCCAGAGCTTGGAGCTAGCTATGCTGCGGCCTTaGCACGGAGGAGCGAGCGGTGCGGAGGGTGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: NIQSLELAMLRP*HGGASGAEGEG Trigger: CCCCTCACCCTCCGCACCGCTCGCTCCTCCGTGGCAAGGCCGCAGCATAGCTAGCTCCAAGCTCTGGATGTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 ENSMUST00000130454.8 |
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| CDS CCA 72 bp | GCCTGGATCTCCCGGGCTTTTCGACGGGCAAGCACCTaGATGTGGCTGGAGACCTGCTTCCTTGTGCGCGTC | + |
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Preference number: 6 (lower is better) Translates to: AWISRAFRRAST*MWLETCFLVRV Trigger: GACGCGCACAAGGAAGCAGGTCTCCAGCCACATCCAGGTGCTTGCCCGTCGAAAAGCCCGGGAGATCCAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 ENSMUST00000130454.8 |
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| CDS CAA 90 bp | TCTTGCTGGCGCTCCAGGAAAGCCGAGAACTCCAACATCCAGAGCTaGGAGCTAGCTATGCTGCGGCCTTGCCACGGAGGAGCGAGCGGT | + |
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Preference number: 6 (lower is better) Translates to: SCWRSRKAENSNIQS*ELAMLRPCHGGASG Trigger: ACCGCTCGCTCCTCCGTGGCAAGGCCGCAGCATAGCTAGCTCCAAGCTCTGGATGTTGGAGTTCTCGGCTTTCCTGGAGCGCCAGCAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 ENSMUST00000130454.8 |
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| CDS CCA 72 bp | GCCTTGTTCTTAGCTGCCTGGTCCTTGAGTTTGGCCTaGATCTCCCGGGCTTTTCGACGGGCAAGCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: ALFLAAWSLSLA*ISRAFRRASTW Trigger: CCAGGTGCTTGCCCGTCGAAAAGCCCGGGAGATCCAGGCCAAACTCAAGGACCAGGCAGCTAAGAACAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006311.13 |
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| CDS CAA 72 bp | CGCTCCAGGAAAGCCGAGAACTCCAACATCCAGAGCTaGGAGCTAGCTATGCTGCGGCCTTGCCACGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: RSRKAENSNIQS*ELAMLRPCHGG Trigger: TCCTCCGTGGCAAGGCCGCAGCATAGCTAGCTCCAAGCTCTGGATGTTGGAGTTCTCGGCTTTCCTGGAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 ENSMUST00000130454.8 |
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| CDS CCA 72 bp | CCTGGCAAAGCTCCTTGCCAAAACTTGAGTTTGGCCTaGATCTCCCGGGCTTTTCGACGGGCAAGCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: PGKAPCQNLSLA*ISRAFRRASTW Trigger: CCAGGTGCTTGCCCGTCGAAAAGCCCGGGAGATCCAGGCCAAACTCAAGTTTTGGCAAGGAGCTTTGCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112157.4 ENSMUST00000130454.8 |
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| CDS GCA 72 bp | TCGTGGGATGTTCCAGGTTGGCCTGGCAAAGCTCCTTaGCAAAACTTGAGTTTGGCCTGGATCTCCCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SWDVPGWPGKAP*QNLSLAWISRA Trigger: AGCCCGGGAGATCCAGGCCAAACTCAAGTTTTGGCAAGGAGCTTTGCCAGGCCAACCTGGAACATCCCACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112157.4 ENSMUST00000130454.8 |
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| CDS CAA 72 bp | ATCGTGGGATGTTCCAGGTTGGCCTGGCAAAGCTCCTaGCCAAAACTTGAGTTTGGCCTGGATCTCCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: IVGCSRLAWQSS*PKLEFGLDLPG Trigger: GCCCGGGAGATCCAGGCCAAACTCAAGTTTTGGCAAGGAGCTTTGCCAGGCCAACCTGGAACATCCCACGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112157.4 ENSMUST00000130454.8 |
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| CDS CCA 72 bp | ACAAACAGGTGTTTGTTGTATGTGTCGGGATCTTGCTaGCGCTCCAGGAAAGCCGAGAACTCCAACATCCAG | + |
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Preference number: 6 (lower is better) Translates to: TNRCLLYVSGSC*RSRKAENSNIQ Trigger: CTGGATGTTGGAGTTCTCGGCTTTCCTGGAGCGCCAGCAAGATCCCGACACATACAACAAACACCTGTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006311.13 ENSMUST00000112157.4 ENSMUST00000130454.8 |
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| CDS CAA 90 bp | GTAGGTGTTTTGAGAGAAAGGTTTCACATCGTGGGATGTTCCAGGTaGGCCTGGCAAAGCTCCTTGCCAAAACTTGAGTTTGGCCTGGAT | + |
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Preference number: 6 (lower is better) Translates to: VGVLRERFHIVGCSR*AWQSSLPKLEFGLD Trigger: ATCCAGGCCAAACTCAAGTTTTGGCAAGGAGCTTTGCCAGGCCAACCTGGAACATCCCACGATGTGAAACCTTTCTCTCAAAACACCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112157.4 ENSMUST00000130454.8 |
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| CDS CAA 72 bp | TTGAGAGAAAGGTTTCACATCGTGGGATGTTCCAGGTaGGCCTGGCAAAGCTCCTTGCCAAAACTTGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: LRERFHIVGCSR*AWQSSLPKLEF Trigger: AAACTCAAGTTTTGGCAAGGAGCTTTGCCAGGCCAACCTGGAACATCCCACGATGTGAAACCTTTCTCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112157.4 ENSMUST00000130454.8 |
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