Pregenerated sensors for TEAD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030796Ensembl transcript IDs: ENSMUST00000033060.14, ENSMUST00000097216.5, ENSMUST00000107801.10, ENSMUST00000209343.2, ENSMUST00000209437.2, ENSMUST00000209478.2, ENSMUST00000209678.2, ENSMUST00000210447.2, ENSMUST00000211744.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAGCAGGAAGGTTACAAGGCAGTCAGTAAGACACCCCACATAGCCCAGCTCCCTAGGAAGGGGGTGTTGTaGAAAACACCAGCGGCGGGG | + |
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Preference number: 2 (lower is better) Translates to: KQEGYKAVSKTPHIAQLPRKGVL*KTPAAG Trigger: CCCCGCCGCTGGTGTTTTTCACAACACCCCCTTCCT...AGGGAGCTGGGCTATGTGGGGTGTCTTACTGACTGCCTTGTAACCTTCCTGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| 3UTR-3UTR TCA 90 bp | TCAAACATAAACCATCACTCTTGGGGAAAGGAAGGTGGCAGGGTGGTCCAAGGCAGGAAGGGGGTGTTGTaGAAAACACCAGCGGCGGGG | + |
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Preference number: 2 (lower is better) Translates to: SNINHHSWGKEGGRVVQGRKGVL*KTPAAG Trigger: CCCCGCCGCTGGTGTTTTTCACAACACCCCCTTCCT...GCCTTGGACCACCCTGCCACCTTCCTTTCCCCAAGAGTGATGGTTTATGTTTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| 3UTR CAA 90 bp | TGTCCCCAATCCCTGATGCTCAGGAGTGGTGTGTCCTGTCAAATGTaGTCTCTGAGGTCCTCGTGTTGGGGATCTAAACTCAAACCCAGC | + |
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Preference number: 2 (lower is better) Translates to: CPQSLMLRSGVSCQM*SLRSSCWGSKLKPS Trigger: GCTGGGTTTGAGTTTAGATCCCCAACACGAGGACCTCAGAGACAACATTTGACAGGACACACCACTCCTGAGCATCAGGGATTGGGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| 3UTR-3UTR TCA 90 bp | GGGAGAGGCAGATATGAGACACGTGGGAAGCAGGAAGGTTACAAGGCAGTCAGTGTCAAATGTTGTCTCTaGGGTCCTCGTGTTGGGGAT | + |
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Preference number: 2 (lower is better) Translates to: GRGRYETRGKQEGYKAVSVKCCL*GPRVGD Trigger: ATCCCCAACACGAGGACCTCAGAGACAACATTTGAC...ACTGACTGCCTTGTAACCTTCCTGCTTCCCACGTGTCTCATATCTGCCTCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| 3UTR-3UTR TCA 90 bp | GGTTACAAGGCAGTCAGTAAGACACCCCACATAGCCCAGCTCCCTTTCCAGAAGGTCAAATGTTGTCTCTaGGGTCCTCGTGTTGGGGAT | + |
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Preference number: 2 (lower is better) Translates to: GYKAVSKTPHIAQLPFQKVKCCL*GPRVGD Trigger: ATCCCCAACACGAGGACCTCAGAGACAACATTTGAC...CTTCTGGAAAGGGAGCTGGGCTATGTGGGGTGTCTTACTGACTGCCTTGTAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| 3UTR-3UTR CAA 90 bp | GGGAGAGGCAGATATGAGACACGTGGGAAGCAGGAAGGTTACAAGGCAGTCAGTGTGTCCTGTCAAATGTaGTCTCTGAGGTCCTCGTGT | + |
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Preference number: 3 (lower is better) Translates to: GRGRYETRGKQEGYKAVSVSCQM*SLRSSC Trigger: ACACGAGGACCTCAGAGACAACATTTGACAGGACAC...ACTGACTGCCTTGTAACCTTCCTGCTTCCCACGTGTCTCATATCTGCCTCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| 3UTR TCA 72 bp | TGCTCAGGAGTGGTGTGTCCTGTCAAATGTTGTCTCTaGGGTCCTCGTGTTGGGGATCTAAACTCAAACCCA | + |
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Preference number: 3 (lower is better) Translates to: CSGVVCPVKCCL*GPRVGDLNSNP Trigger: TGGGTTTGAGTTTAGATCCCCAACACGAGGACCTCAGAGACAACATTTGACAGGACACACCACTCCTGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| 3UTR CCA 72 bp | GTGTCCTGTCAAATGTTGTCTCTGAGGTCCTCGTGTTaGGGATCTAAACTCAAACCCAGCTCACTCAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: VSCQMLSLRSSC*GSKLKPSSLSS Trigger: TGAGCTGAGTGAGCTGGGTTTGAGTTTAGATCCCCAACACGAGGACCTCAGAGACAACATTTGACAGGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR GCA 90 bp | GAGGGGCCCTGTAGAACGGAGGCCCGTGCTGTACCTGTGAGCTCACTCCTGTCCACCTCCGCTGCTCCCTaGCTCCTCGGCACTGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: EGPCRTEARAVPVSSLLSTSAAP*LLGTGA Trigger: GGCCCCAGTGCCGAGGAGGCAGGGAGCAGCGGAGGT...GGACAGGAGTGAGCTCACAGGTACAGCACGGGCCTCCGTTCTACAGGGCCCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | GAGGGGCCCTGTAGAACGGAGGCCCGTGCTGTACCTGTGAGCTCACTCCTGTCCGGGCCCAGCTTGGCCTaGAGGGAAGGGGCGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: EGPCRTEARAVPVSSLLSGPSLA*REGAEM Trigger: CATCTCCGCCCCTTCCCTCCAGGCCAAGCTGGGCCC...GGACAGGAGTGAGCTCACAGGTACAGCACGGGCCTCCGTTCTACAGGGCCCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | AGTAAGACACCCCACATAGCCCAGCTCCCTTTCCAGAAGAGCAAGGAGGGGCCCCCGAGCCTGCCAGGCTaGGGGAGACGGAGCGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SKTPHIAQLPFQKSKEGPPSLPG*GRRSGW Trigger: CCACCCGCTCCGTCTCCCCCAGCCTGGCAGGCTCGG...GGGCCCCTCCTTGCTCTTCTGGAAAGGGAGCTGGGCTATGTGGGGTGTCTTACT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR GCA 90 bp | GAGGGGCCCTGTAGAACGGAGGCCCGTGCTGTACCTGTGAGCTCACTCCTGTCCCGGTGCCCTCTTCGCTaGCTTCCTCGCTACCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: EGPCRTEARAVPVSSLLSRCPLR*LPRYLS Trigger: GGACAGGTAGCGAGGAAGGCAGCGAAGAGGGCACCG...GGACAGGAGTGAGCTCACAGGTACAGCACGGGCCTCCGTTCTACAGGGCCCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR TCA 90 bp | GAGGGGCCCTGTAGAACGGAGGCCCGTGCTGTACCTGTGAGCTCACTCCTGTCCTGGCCCAGAGCTCCCTaGCCAGAACTGGAAAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: EGPCRTEARAVPVSSLLSWPRAP*PELEKL Trigger: GAGCTTTTCCAGTTCTGGTCAGGGAGCTCTGGGCCA...GGACAGGAGTGAGCTCACAGGTACAGCACGGGCCTCCGTTCTACAGGGCCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR GCA 90 bp | CATGGGCCCCTCTCCAAATCTCTCTTACAGAGAGAGCAAAAGGGCCCTTCCCAGACCTCCGCTGCTCCCTaGCTCCTCGGCACTGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: HGPLSKSLLQREQKGPSQTSAAP*LLGTGA Trigger: GGCCCCAGTGCCGAGGAGGCAGGGAGCAGCGGAGGT...CTGGGAAGGGCCCTTTTGCTCTCTCTGTAAGAGAGATTTGGAGAGGGGCCCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | GGGAGAGGCAGATATGAGACACGTGGGAAGCAGGAAGGTTACAAGGCAGTCAGTCCGAGCCTGCCAGGCTaGGGGAGACGGAGCGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GRGRYETRGKQEGYKAVSPSLPG*GRRSGW Trigger: CCACCCGCTCCGTCTCCCCCAGCCTGGCAGGCTCGG...ACTGACTGCCTTGTAACCTTCCTGCTTCCCACGTGTCTCATATCTGCCTCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | CATGGGCCCCTCTCCAAATCTCTCTTACAGAGAGAGCAAAAGGGCCCTTCCCAGCGCCCGTCCTCCAGCTaGGCCCGTTCCGTCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: HGPLSKSLLQREQKGPSQRPSSS*ARSVST Trigger: GGTGGAGACGGAACGGGCCCAGCTGGAGGACGGGCG...CTGGGAAGGGCCCTTTTGCTCTCTCTGTAAGAGAGATTTGGAGAGGGGCCCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | TCAAACATAAACCATCACTCTTGGGGAAAGGAAGGTGGCAGGGTGGTCCAAGGCCCGAGCCTGCCAGGCTaGGGGAGACGGAGCGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SNINHHSWGKEGGRVVQGPSLPG*GRRSGW Trigger: CCACCCGCTCCGTCTCCCCCAGCCTGGCAGGCTCGG...GCCTTGGACCACCCTGCCACCTTCCTTTCCCCAAGAGTGATGGTTTATGTTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR TCA 90 bp | GAGGGGCCCTGTAGAACGGAGGCCCGTGCTGTACCTGTGAGCTCACTCCTGTCCTGGGACACTGCTGACTaGTGTGGACAAACAGATGCC | + |
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Preference number: 4 (lower is better) Translates to: EGPCRTEARAVPVSSLLSWDTAD*CGQTDA Trigger: GGCATCTGTTTGTCCACATCAGTCAGCAGTGTCCCA...GGACAGGAGTGAGCTCACAGGTACAGCACGGGCCTCCGTTCTACAGGGCCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | GGGAGAGGCAGATATGAGACACGTGGGAAGCAGGAAGGTTACAAGGCAGTCAGTGGGCCCAGCTTGGCCTaGAGGGAAGGGGCGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: GRGRYETRGKQEGYKAVSGPSLA*REGAEM Trigger: CATCTCCGCCCCTTCCCTCCAGGCCAAGCTGGGCCC...ACTGACTGCCTTGTAACCTTCCTGCTTCCCACGTGTCTCATATCTGCCTCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | AAGCAGGAAGGTTACAAGGCAGTCAGTAAGACACCCCACATAGCCCAGCTCCCTCAGAAGGGCCCAGCTTaGCCTGGAGGGAAGGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: KQEGYKAVSKTPHIAQLPQKGPA*PGGKGR Trigger: CCGCCCCTTCCCTCCAGGCCAAGCTGGGCCCTTCTG...AGGGAGCTGGGCTATGTGGGGTGTCTTACTGACTGCCTTGTAACCTTCCTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | GGTTACAAGGCAGTCAGTAAGACACCCCACATAGCCCAGCTCCCTTTCCAGAAGCAGAAGGGCCCAGCTTaGCCTGGAGGGAAGGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: GYKAVSKTPHIAQLPFQKQKGPA*PGGKGR Trigger: CCGCCCCTTCCCTCCAGGCCAAGCTGGGCCCTTCTG...CTTCTGGAAAGGGAGCTGGGCTATGTGGGGTGTCTTACTGACTGCCTTGTAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | AAGCAGGAAGGTTACAAGGCAGTCAGTAAGACACCCCACATAGCCCAGCTCCCTCTGCCTCCTCGGCACTaGGGCCCCAGTTCAGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: KQEGYKAVSKTPHIAQLPLPPRH*GPSSGP Trigger: CGGACCTGAACTGGGGCCCCAGTGCCGAGGAGGCAG...AGGGAGCTGGGCTATGTGGGGTGTCTTACTGACTGCCTTGTAACCTTCCTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | GGGAGAGGCAGATATGAGACACGTGGGAAGCAGGAAGGTTACAAGGCAGTCAGTCTGCCTCCTCGGCACTaGGGCCCCAGTTCAGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: GRGRYETRGKQEGYKAVSLPPRH*GPSSGP Trigger: CGGACCTGAACTGGGGCCCCAGTGCCGAGGAGGCAG...ACTGACTGCCTTGTAACCTTCCTGCTTCCCACGTGTCTCATATCTGCCTCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | TCAAACATAAACCATCACTCTTGGGGAAAGGAAGGTGGCAGGGTGGTCCAAGGCCGCCCGTCCTCCAGCTaGGCCCGTTCCGTCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: SNINHHSWGKEGGRVVQGRPSSS*ARSVST Trigger: GGTGGAGACGGAACGGGCCCAGCTGGAGGACGGGCG...GCCTTGGACCACCCTGCCACCTTCCTTTCCCCAAGAGTGATGGTTTATGTTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR GCA 90 bp | CATGGGCCCCTCTCCAAATCTCTCTTACAGAGAGAGCAAAAGGGCCCTTCCCAGCGGTGCCCTCTTCGCTaGCTTCCTCGCTACCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: HGPLSKSLLQREQKGPSQRCPLR*LPRYLS Trigger: GGACAGGTAGCGAGGAAGGCAGCGAAGAGGGCACCG...CTGGGAAGGGCCCTTTTGCTCTCTCTGTAAGAGAGATTTGGAGAGGGGCCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR GCA 90 bp | GAGGGGCCCTGTAGAACGGAGGCCCGTGCTGTACCTGTGAGCTCACTCCTGTCCACCTTCTCTACCACTTaGTTGCCAAAGGAGCAGACC | + |
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Preference number: 4 (lower is better) Translates to: EGPCRTEARAVPVSSLLSTFSTT*LPKEQT Trigger: GGTCTGCTCCTTTGGCAAGCAAGTGGTAGAGAAGGT...GGACAGGAGTGAGCTCACAGGTACAGCACGGGCCTCCGTTCTACAGGGCCCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | AGTAAGACACCCCACATAGCCCAGCTCCCTTTCCAGAAGAGCAAGGAGGGGCCCCCAGGTACTCACACATaGGAGAGCGCAGCAGACGGT | + |
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Preference number: 4 (lower is better) Translates to: SKTPHIAQLPFQKSKEGPPGTHT*ESAADG Trigger: ACCGTCTGCTGCGCTCTCCCATGTGTGAGTACCTGG...GGGCCCCTCCTTGCTCTTCTGGAAAGGGAGCTGGGCTATGTGGGGTGTCTTACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | TCTCTTACAGAGAGAGCAAAAGGGCCCTTCCCAGGAAGGGGGTGTTGTGAAAAACAGAAGGGCCCAGCTTaGCCTGGAGGGAAGGGGCGG | + |
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Preference number: 4 (lower is better) Translates to: SLTERAKGPFPGRGCCEKQKGPA*PGGKGR Trigger: CCGCCCCTTCCCTCCAGGCCAAGCTGGGCCCTTCTG...TTTTTCACAACACCCCCTTCCTGGGAAGGGCCCTTTTGCTCTCTCTGTAAGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | TCTCTTACAGAGAGAGCAAAAGGGCCCTTCCCAGGAAGGGGGTGTTGTGAAAAACTGCCTCCTCGGCACTaGGGCCCCAGTTCAGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: SLTERAKGPFPGRGCCEKLPPRH*GPSSGP Trigger: CGGACCTGAACTGGGGCCCCAGTGCCGAGGAGGCAG...TTTTTCACAACACCCCCTTCCTGGGAAGGGCCCTTTTGCTCTCTCTGTAAGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR TCA 90 bp | CCCCTCTCCAAATCTCTCTTACAGAGAGAGCAAAAGGGCCCTTCCCAGGAAGGGCCTCATCTGACAGGATaGTCTTGCGACGGCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: PLSKSLLQREQKGPSQEGPHLTG*SCDGHR Trigger: CCTGTGGCCGTCGCAAGATCATCCTGTCAGATGAGG...CCCTTCCTGGGAAGGGCCCTTTTGCTCTCTCTGTAAGAGAGATTTGGAGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033060.14 ENSMUST00000107801.10 |
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| CDS-3UTR TCA 90 bp | CCCCTCTCCAAATCTCTCTTACAGAGAGAGCAAAAGGGCCCTTCCCAGGAAGGGTGGCCCAGAGCTCCCTaGCCAGAACTGGAAAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: PLSKSLLQREQKGPSQEGWPRAP*PELEKL Trigger: GAGCTTTTCCAGTTCTGGTCAGGGAGCTCTGGGCCA...CCCTTCCTGGGAAGGGCCCTTTTGCTCTCTCTGTAAGAGAGATTTGGAGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR TCA 90 bp | CCCCTCTCCAAATCTCTCTTACAGAGAGAGCAAAAGGGCCCTTCCCAGGAAGGGGGTCCGCCCAGAACTTaGCGAGGAAGAAGGCATGTG | + |
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Preference number: 4 (lower is better) Translates to: PLSKSLLQREQKGPSQEGGPPRT*RGRRHV Trigger: CACATGCCTTCTTCCTCGTCAAGTTCTGGGCGGACC...CCCTTCCTGGGAAGGGCCCTTTTGCTCTCTCTGTAAGAGAGATTTGGAGAGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR GCA 90 bp | CCCCTCTCCAAATCTCTCTTACAGAGAGAGCAAAAGGGCCCTTCCCAGGAAGGGGCTCCACACACCTTCTaGATCAGGGCTGCCATCACC | + |
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Preference number: 4 (lower is better) Translates to: PLSKSLLQREQKGPSQEGAPHTF*IRAAIT Trigger: GGTGATGGCAGCCCTGATGCAGAAGGTGTGTGGAGC...CCCTTCCTGGGAAGGGCCCTTTTGCTCTCTCTGTAAGAGAGATTTGGAGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033060.14 ENSMUST00000107801.10 |
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| CDS-3UTR GCA 90 bp | CCCCTCTCCAAATCTCTCTTACAGAGAGAGCAAAAGGGCCCTTCCCAGGAAGGGGGCGGAGATGAGCTGTaGCGAAGACATGGTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: PLSKSLLQREQKGPSQEGGGDEL*RRHGGH Trigger: ATGGCCACCATGTCTTCGGCACAGCTCATCTCCGCC...CCCTTCCTGGGAAGGGCCCTTTTGCTCTCTCTGTAAGAGAGATTTGGAGAGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR GCA 90 bp | GTGTCCTGTCAAATGTTGTCTCTGAGGTCCTCGTGTTGGGGATCTAAACTCAAAACCTCCGCTGCTCCCTaGCTCCTCGGCACTGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: VSCQMLSLRSSCWGSKLKTSAAP*LLGTGA Trigger: GGCCCCAGTGCCGAGGAGGCAGGGAGCAGCGGAGGT...TTTGAGTTTAGATCCCCAACACGAGGACCTCAGAGACAACATTTGACAGGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | CAAGCTGGGAAAACATTATCTTCGGGTTGTGACGTCACAGTTCCCAGAGAAAGGGGGCCCAGCTTGGCCTaGAGGGAAGGGGCGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: QAGKTLSSGCDVTVPRERGPSLA*REGAEM Trigger: CATCTCCGCCCCTTCCCTCCAGGCCAAGCTGGGCCC...CCTTTCTCTGGGAACTGTGACGTCACAACCCGAAGATAATGTTTTCCCAGCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | GTGTCCTGTCAAATGTTGTCTCTGAGGTCCTCGTGTTGGGGATCTAAACTCAAACGCCCGTCCTCCAGCTaGGCCCGTTCCGTCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: VSCQMLSLRSSCWGSKLKRPSSS*ARSVST Trigger: GGTGGAGACGGAACGGGCCCAGCTGGAGGACGGGCG...TTTGAGTTTAGATCCCCAACACGAGGACCTCAGAGACAACATTTGACAGGACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | AGTAAGACACCCCACATAGCCCAGCTCCCTTTCCAGAAGAGCAAGGAGGGGCCCGGGCTCCTCGTTCACTaGTGGAGACTTCAAAGACGT | + |
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Preference number: 4 (lower is better) Translates to: SKTPHIAQLPFQKSKEGPGLLVH*WRLQRR Trigger: ACGTCTTTGAAGTCTCCACCAGTGAACGAGGAGCCC...GGGCCCCTCCTTGCTCTTCTGGAAAGGGAGCTGGGCTATGTGGGGTGTCTTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR TCA 90 bp | GGGAGAGGCAGATATGAGACACGTGGGAAGCAGGAAGGTTACAAGGCAGTCAGTCCTCATCTGACAGGATaGTCTTGCGACGGCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: GRGRYETRGKQEGYKAVSPHLTG*SCDGHR Trigger: CCTGTGGCCGTCGCAAGATCATCCTGTCAGATGAGG...ACTGACTGCCTTGTAACCTTCCTGCTTCCCACGTGTCTCATATCTGCCTCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033060.14 ENSMUST00000107801.10 |
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| CDS-3UTR TCA 90 bp | GGTTACAAGGCAGTCAGTAAGACACCCCACATAGCCCAGCTCCCTTTCCAGAAGTGGCCCAGAGCTCCCTaGCCAGAACTGGAAAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GYKAVSKTPHIAQLPFQKWPRAP*PELEKL Trigger: GAGCTTTTCCAGTTCTGGTCAGGGAGCTCTGGGCCA...CTTCTGGAAAGGGAGCTGGGCTATGTGGGGTGTCTTACTGACTGCCTTGTAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR GCA 90 bp | GGTTACAAGGCAGTCAGTAAGACACCCCACATAGCCCAGCTCCCTTTCCAGAAGGGCGGAGATGAGCTGTaGCGAAGACATGGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GYKAVSKTPHIAQLPFQKGGDEL*RRHGGH Trigger: ATGGCCACCATGTCTTCGGCACAGCTCATCTCCGCC...CTTCTGGAAAGGGAGCTGGGCTATGTGGGGTGTCTTACTGACTGCCTTGTAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS-3UTR GCA 90 bp | GGGAGAGGCAGATATGAGACACGTGGGAAGCAGGAAGGTTACAAGGCAGTCAGTTTCGTTCCGGCCTTCTaGATCAGGGCTGCCATCACC | + |
|
Preference number: 4 (lower is better) Translates to: GRGRYETRGKQEGYKAVSFVPAF*IRAAIT Trigger: GGTGATGGCAGCCCTGATGCAGAAGGCCGGAACGAA...ACTGACTGCCTTGTAACCTTCCTGCTTCCCACGTGTCTCATATCTGCCTCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097216.5 |
||
| CDS-3UTR CCA 90 bp | CATGGGCCCCTCTCCAAATCTCTCTTACAGAGAGAGCAAAAGGGCCCTTCCCAGGAAGGGCTTCACGTCTaGAACATTCCATGGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HGPLSKSLLQREQKGPSQEGLHV*NIPWWP Trigger: GGGCCACCATGGAATGTTCCAGACGTGAAGCCCTTC...CTGGGAAGGGCCCTTTTGCTCTCTCTGTAAGAGAGATTTGGAGAGGGGCCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS-3UTR CCA 90 bp | CAGGAGTGGTGTGTCCTGTCAAATGTTGTCTCTGAGGTCCTCGTGTTGGGGATCCCAGGTACTCACACATaGGAGAGCGCAGCAGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: QEWCVLSNVVSEVLVLGIPGTHT*ESAADG Trigger: ACCGTCTGCTGCGCTCTCCCATGTGTGAGTACCTGG...GATCCCCAACACGAGGACCTCAGAGACAACATTTGACAGGACACACCACTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS-3UTR TCA 90 bp | GGTTACAAGGCAGTCAGTAAGACACCCCACATAGCCCAGCTCCCTTTCCAGAAGGGGCTGGGACACTGCTaGCTGATGTGGACAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GYKAVSKTPHIAQLPFQKGLGHC*LMWTNR Trigger: TCTGTTTGTCCACATCAGTCAGCAGTGTCCCAGCCC...CTTCTGGAAAGGGAGCTGGGCTATGTGGGGTGTCTTACTGACTGCCTTGTAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS-3UTR TCA 90 bp | CCAATCCCTGATGCTCAGGAGTGGTGTGTCCTGTCAAATGTTGTCTCTGAGGTCGGTCCGCCCAGAACTTaGCGAGGAAGAAGGCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: PIPDAQEWCVLSNVVSEVGPPRT*RGRRHV Trigger: CACATGCCTTCTTCCTCGTCAAGTTCTGGGCGGACC...GACCTCAGAGACAACATTTGACAGGACACACCACTCCTGAGCATCAGGGATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS-3UTR TCA 90 bp | CCCCTCTCCAAATCTCTCTTACAGAGAGAGCAAAAGGGCCCTTCCCAGGAAGGGCAACCTGGAGGATGGTaGAGTTCTCCAGGACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLSKSLLQREQKGPSQEGQPGGW*SSPGHC Trigger: ACAGTGTCCTGGAGAACTTCACCATCCTCCAGGTTG...CCCTTCCTGGGAAGGGCCCTTTTGCTCTCTCTGTAAGAGAGATTTGGAGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS-3UTR CCA 90 bp | CATGGGCCCCTCTCCAAATCTCTCTTACAGAGAGAGCAAAAGGGCCCTTCCCAGGGAAGGCCTTGTCCTTaGAGACTTGGTCCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HGPLSKSLLQREQKGPSQGRPCP*RLGPSA Trigger: AGCTGAAGGACCAAGTCTCCAAGGACAAGGCCTTCC...CTGGGAAGGGCCCTTTTGCTCTCTCTGTAAGAGAGATTTGGAGAGGGGCCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS-3UTR CCA 90 bp | GGTTACAAGGCAGTCAGTAAGACACCCCACATAGCCCAGCTCCCTTTCCAGAAGATGGTGGCCATCGTCTaGAAGGCCTTGTCCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GYKAVSKTPHIAQLPFQKMVAIV*KALSLE Trigger: CTCCAAGGACAAGGCCTTCCAGACGATGGCCACCAT...CTTCTGGAAAGGGAGCTGGGCTATGTGGGGTGTCTTACTGACTGCCTTGTAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS-3UTR CCA 90 bp | AAGCAGGAAGGTTACAAGGCAGTCAGTAAGACACCCCACATAGCCCAGCTCCCTGAAGGGCTTCACGTCTaGAACATTCCATGGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KQEGYKAVSKTPHIAQLPEGLHV*NIPWWP Trigger: GGGCCACCATGGAATGTTCCAGACGTGAAGCCCTTC...AGGGAGCTGGGCTATGTGGGGTGTCTTACTGACTGCCTTGTAACCTTCCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS-3UTR CCA 90 bp | CCCCTCTCCAAATCTCTCTTACAGAGAGAGCAAAAGGGCCCTTCCCAGGAAGGGGGGCTCCTCGTTCACTaGTGGAGACTTCAAAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: PLSKSLLQREQKGPSQEGGLLVH*WRLQRR Trigger: ACGTCTTTGAAGTCTCCACCAGTGAACGAGGAGCCC...CCCTTCCTGGGAAGGGCCCTTTTGCTCTCTCTGTAAGAGAGATTTGGAGAGGGG 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS-3UTR TCA 90 bp | CAGGAGTGGTGTGTCCTGTCAAATGTTGTCTCTGAGGTCCTCGTGTTGGGGATCCTTCGAGCCAAAACCTaGATATGGCTGGAGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QEWCVLSNVVSEVLVLGILRAKT*IWLETC Trigger: GCAGGTCTCCAGCCATATTCAGGTTTTGGCTCGAAG...GATCCCCAACACGAGGACCTCAGAGACAACATTTGACAGGACACACCACTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS-3UTR TCA 90 bp | AAGCAGGAAGGTTACAAGGCAGTCAGTAAGACACCCCACATAGCCCAGCTCCCTCTTCGAGCCAAAACCTaGATATGGCTGGAGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KQEGYKAVSKTPHIAQLPLRAKT*IWLETC Trigger: GCAGGTCTCCAGCCATATTCAGGTTTTGGCTCGAAG...AGGGAGCTGGGCTATGTGGGGTGTCTTACTGACTGCCTTGTAACCTTCCTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS-3UTR TCA 90 bp | GGTTACAAGGCAGTCAGTAAGACACCCCACATAGCCCAGCTCCCTTTCCAGAAGCTTCGAGCCAAAACCTaGATATGGCTGGAGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GYKAVSKTPHIAQLPFQKLRAKT*IWLETC Trigger: GCAGGTCTCCAGCCATATTCAGGTTTTGGCTCGAAG...CTTCTGGAAAGGGAGCTGGGCTATGTGGGGTGTCTTACTGACTGCCTTGTAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR TCA 90 bp | GGGAGAGGCAGATATGAGACACGTGGGAAGCAGGAAGGTTACAAGGCAGTCAGTTGGGACACTGCTGACTaGTGTGGACAAACAGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRGRYETRGKQEGYKAVSWDTAD*CGQTDA Trigger: GGCATCTGTTTGTCCACATCAGTCAGCAGTGTCCCA...ACTGACTGCCTTGTAACCTTCCTGCTTCCCACGTGTCTCATATCTGCCTCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS-3UTR TCA 90 bp | GGTTACAAGGCAGTCAGTAAGACACCCCACATAGCCCAGCTCCCTTTCCAGAAGCAACCTGGAGGATGGTaGAGTTCTCCAGGACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GYKAVSKTPHIAQLPFQKQPGGW*SSPGHC Trigger: ACAGTGTCCTGGAGAACTTCACCATCCTCCAGGTTG...CTTCTGGAAAGGGAGCTGGGCTATGTGGGGTGTCTTACTGACTGCCTTGTAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS-3UTR GCA 90 bp | GTGTCCTGTCAAATGTTGTCTCTGAGGTCCTCGTGTTGGGGATCTAAACTCAAACGGTGCCCTCTTCGCTaGCTTCCTCGCTACCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSCQMLSLRSSCWGSKLKRCPLR*LPRYLS Trigger: GGACAGGTAGCGAGGAAGGCAGCGAAGAGGGCACCG...TTTGAGTTTAGATCCCCAACACGAGGACCTCAGAGACAACATTTGACAGGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR GCA 90 bp | TCTCTTACAGAGAGAGCAAAAGGGCCCTTCCCAGGAAGGGGGTGTTGTGAAAAAGCTCCACACACCTTCTaGATCAGGGCTGCCATCACC | + |
|
Preference number: 4 (lower is better) Translates to: SLTERAKGPFPGRGCCEKAPHTF*IRAAIT Trigger: GGTGATGGCAGCCCTGATGCAGAAGGTGTGTGGAGC...TTTTTCACAACACCCCCTTCCTGGGAAGGGCCCTTTTGCTCTCTCTGTAAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033060.14 ENSMUST00000107801.10 |
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| CDS-3UTR GCA 90 bp | CCCCTCTCCAAATCTCTCTTACAGAGAGAGCAAAAGGGCCCTTCCCAGGAAGGGACCTTCTCTACCACTTaGTTGCCAAAGGAGCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: PLSKSLLQREQKGPSQEGTFSTT*LPKEQT Trigger: GGTCTGCTCCTTTGGCAAGCAAGTGGTAGAGAAGGT...CCCTTCCTGGGAAGGGCCCTTTTGCTCTCTCTGTAAGAGAGATTTGGAGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS-3UTR CCA 90 bp | CCAATCCCTGATGCTCAGGAGTGGTGTGTCCTGTCAAATGTTGTCTCTGAGGTCATGGTGGCCATCGTCTaGAAGGCCTTGTCCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PIPDAQEWCVLSNVVSEVMVAIV*KALSLE Trigger: CTCCAAGGACAAGGCCTTCCAGACGATGGCCACCAT...GACCTCAGAGACAACATTTGACAGGACACACCACTCCTGAGCATCAGGGATTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | TCAAACATAAACCATCACTCTTGGGGAAAGGAAGGTGGCAGGGTGGTCCAAGGCGAAGGGCTTCACGTCTaGAACATTCCATGGTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SNINHHSWGKEGGRVVQGEGLHV*NIPWWP Trigger: GGGCCACCATGGAATGTTCCAGACGTGAAGCCCTTC...GCCTTGGACCACCCTGCCACCTTCCTTTCCCCAAGAGTGATGGTTTATGTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR TCA 90 bp | CCAATCCCTGATGCTCAGGAGTGGTGTGTCCTGTCAAATGTTGTCTCTGAGGTCTGGGACACTGCTGACTaGTGTGGACAAACAGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: PIPDAQEWCVLSNVVSEVWDTAD*CGQTDA Trigger: GGCATCTGTTTGTCCACATCAGTCAGCAGTGTCCCA...GACCTCAGAGACAACATTTGACAGGACACACCACTCCTGAGCATCAGGGATTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR TCA 90 bp | TCTCTTACAGAGAGAGCAAAAGGGCCCTTCCCAGGAAGGGGGTGTTGTGAAAAAGGGCTGGGACACTGCTaGCTGATGTGGACAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLTERAKGPFPGRGCCEKGLGHC*LMWTNR Trigger: TCTGTTTGTCCACATCAGTCAGCAGTGTCCCAGCCC...TTTTTCACAACACCCCCTTCCTGGGAAGGGCCCTTTTGCTCTCTCTGTAAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR GCA 90 bp | AAGCAGGAAGGTTACAAGGCAGTCAGTAAGACACCCCACATAGCCCAGCTCCCTATATGGCTGGAGACCTaGTTTCGCGTTCTCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KQEGYKAVSKTPHIAQLPIWLET*FRVLVF Trigger: GAAGACGAGAACGCGAAAGCAGGTCTCCAGCCATAT...AGGGAGCTGGGCTATGTGGGGTGTCTTACTGACTGCCTTGTAACCTTCCTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR GCA 90 bp | CAAGCTGGGAAAACATTATCTTCGGGTTGTGACGTCACAGTTCCCAGAGAAAGGGGCGGAGATGAGCTGTaGCGAAGACATGGTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QAGKTLSSGCDVTVPRERGGDEL*RRHGGH Trigger: ATGGCCACCATGTCTTCGGCACAGCTCATCTCCGCC...CCTTTCTCTGGGAACTGTGACGTCACAACCCGAAGATAATGTTTTCCCAGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | CCAATCCCTGATGCTCAGGAGTGGTGTGTCCTGTCAAATGTTGTCTCTGAGGTCGGAAGGCCTTGTCCTTaGAGACTTGGTCCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PIPDAQEWCVLSNVVSEVGRPCP*RLGPSA Trigger: AGCTGAAGGACCAAGTCTCCAAGGACAAGGCCTTCC...GACCTCAGAGACAACATTTGACAGGACACACCACTCCTGAGCATCAGGGATTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | CAAGCTGGGAAAACATTATCTTCGGGTTGTGACGTCACAGTTCCCAGAGAAAGGCCAGGTACTCACACATaGGAGAGCGCAGCAGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: QAGKTLSSGCDVTVPRERPGTHT*ESAADG Trigger: ACCGTCTGCTGCGCTCTCCCATGTGTGAGTACCTGG...CCTTTCTCTGGGAACTGTGACGTCACAACCCGAAGATAATGTTTTCCCAGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | CCCCTCTCCAAATCTCTCTTACAGAGAGAGCAAAAGGGCCCTTCCCAGGAAGGGCTGTTTGTCACAACCTaGAGGATGGTGAAGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLSKSLLQREQKGPSQEGLFVTT*RMVKFS Trigger: GGAGAACTTCACCATCCTCCAGGTTGTGACAAACAG...CCCTTCCTGGGAAGGGCCCTTTTGCTCTCTCTGTAAGAGAGATTTGGAGAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR TCA 90 bp | CAAGCTGGGAAAACATTATCTTCGGGTTGTGACGTCACAGTTCCCAGAGAAAGGGGGCTGGGACACTGCTaGCTGATGTGGACAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QAGKTLSSGCDVTVPRERGLGHC*LMWTNR Trigger: TCTGTTTGTCCACATCAGTCAGCAGTGTCCCAGCCC...CCTTTCTCTGGGAACTGTGACGTCACAACCCGAAGATAATGTTTTCCCAGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR GCA 90 bp | TCAAACATAAACCATCACTCTTGGGGAAAGGAAGGTGGCAGGGTGGTCCAAGGCATATGGCTGGAGACCTaGTTTCGCGTTCTCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SNINHHSWGKEGGRVVQGIWLET*FRVLVF Trigger: GAAGACGAGAACGCGAAAGCAGGTCTCCAGCCATAT...GCCTTGGACCACCCTGCCACCTTCCTTTCCCCAAGAGTGATGGTTTATGTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS-3UTR CCA 90 bp | CAAGCTGGGAAAACATTATCTTCGGGTTGTGACGTCACAGTTCCCAGAGAAAGGATGGTGGCCATCGTCTaGAAGGCCTTGTCCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QAGKTLSSGCDVTVPRERMVAIV*KALSLE Trigger: CTCCAAGGACAAGGCCTTCCAGACGATGGCCACCAT...CCTTTCTCTGGGAACTGTGACGTCACAACCCGAAGATAATGTTTTCCCAGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR TCA 90 bp | CAAGCTGGGAAAACATTATCTTCGGGTTGTGACGTCACAGTTCCCAGAGAAAGGCAACCTGGAGGATGGTaGAGTTCTCCAGGACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: QAGKTLSSGCDVTVPRERQPGGW*SSPGHC Trigger: ACAGTGTCCTGGAGAACTTCACCATCCTCCAGGTTG...CCTTTCTCTGGGAACTGTGACGTCACAACCCGAAGATAATGTTTTCCCAGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | CCCCTCTCCAAATCTCTCTTACAGAGAGAGCAAAAGGGCCCTTCCCAGGAAGGGCTTGGTCCTTCAGCTTaGACTGAATTTCTCTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: PLSKSLLQREQKGPSQEGLGPSA*TEFLSI Trigger: AATCGAGAGAAATTCAGTCCAAGCTGAAGGACCAAG...CCCTTCCTGGGAAGGGCCCTTTTGCTCTCTCTGTAAGAGAGATTTGGAGAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CCA 90 bp | CCAATCCCTGATGCTCAGGAGTGGTGTGTCCTGTCAAATGTTGTCTCTGAGGTCCTGTTTGTCACAACCTaGAGGATGGTGAAGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PIPDAQEWCVLSNVVSEVLFVTT*RMVKFS Trigger: GGAGAACTTCACCATCCTCCAGGTTGTGACAAACAG...GACCTCAGAGACAACATTTGACAGGACACACCACTCCTGAGCATCAGGGATTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS-3UTR CCA 90 bp | CAGGAGTGGTGTGTCCTGTCAAATGTTGTCTCTGAGGTCCTCGTGTTGGGGATCCTTGGTCCTTCAGCTTaGACTGAATTTCTCTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: QEWCVLSNVVSEVLVLGILGPSA*TEFLSI Trigger: AATCGAGAGAAATTCAGTCCAAGCTGAAGGACCAAG...GATCCCCAACACGAGGACCTCAGAGACAACATTTGACAGGACACACCACTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS-3UTR CCA 90 bp | GGGAGAGGCAGATATGAGACACGTGGGAAGCAGGAAGGTTACAAGGCAGTCAGTCTTGGTCCTTCAGCTTaGACTGAATTTCTCTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: GRGRYETRGKQEGYKAVSLGPSA*TEFLSI Trigger: AATCGAGAGAAATTCAGTCCAAGCTGAAGGACCAAG...ACTGACTGCCTTGTAACCTTCCTGCTTCCCACGTGTCTCATATCTGCCTCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS-3UTR GCA 90 bp | GTGTCCTGTCAAATGTTGTCTCTGAGGTCCTCGTGTTGGGGATCTAAACTCAAAACCTTCTCTACCACTTaGTTGCCAAAGGAGCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: VSCQMLSLRSSCWGSKLKTFSTT*LPKEQT Trigger: GGTCTGCTCCTTTGGCAAGCAAGTGGTAGAGAAGGT...TTTGAGTTTAGATCCCCAACACGAGGACCTCAGAGACAACATTTGACAGGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS-3UTR CCA 90 bp | GTGTCCTGTCAAATGTTGTCTCTGAGGTCCTCGTGTTGGGGATCTAAACTCAAACTGTTTGTCACAACCTaGAGGATGGTGAAGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSCQMLSLRSSCWGSKLKLFVTT*RMVKFS Trigger: GGAGAACTTCACCATCCTCCAGGTTGTGACAAACAG...TTTGAGTTTAGATCCCCAACACGAGGACCTCAGAGACAACATTTGACAGGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| 3UTR CAA 72 bp | ATAGCTTTATTCTCCTTCAAACATAAACCATCACTCTaGGGGAAAGGAAGGTGGCAGGGTGGTCCAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IALFSFKHKPSL*GKGRWQGGPRL Trigger: GAGCCTTGGACCACCCTGCCACCTTCCTTTCCCCAAGAGTGATGGTTTATGTTTGAAGGAGAATAAAGCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS GCA 90 bp | TCTCATACTGGCTGCTCACTCCATAGAAGCCACCGCCACCTCCGCTaGTCCCTGCCTCCTCGGCACTGGGGCCCCAGTTCAGGTCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SHTGCSLHRSHRHLR*SLPPRHWGPSSGPP Trigger: GGGCGGACCTGAACTGGGGCCCCAGTGCCGAGGAGGCAGGGAGCAGCGGAGGTGGCGGTGGCTTCTATGGAGTGAGCAGCCAGTATGAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
||
| CDS GCA 90 bp | TCAACTGCGTCTGGCGGTTCCACAAACGCTGAGAACTCTATCAGCTaGAGGCGGGCAGTGCCCAGGGCCCGAGCCTGCCAGGCTGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: STASGGSTNAENSIS*RRAVPRARACQAGG Trigger: TCCCCCAGCCTGGCAGGCTCGGGCCCTGGGCACTGCCCGCCTGCAGCTGATAGAGTTCTCAGCGTTTGTGGAACCGCCAGACGCAGTTGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 ENSMUST00000210447.2 |
||
| CDS TCA 90 bp | GAGGGCCAGAAGGGCCCAGCTTGGCCTGGAGGGAAGGGGCGGAGATaGGCTGTGCCGAAGACATGGTGGCCATCGTCTGGAAGGCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: EGQKGPAWPGGKGRR*AVPKTWWPSSGRPC Trigger: ACAAGGCCTTCCAGACGATGGCCACCATGTCTTCGGCACAGCTCATCTCCGCCCCTTCCCTCCAGGCCAAGCTGGGCCCTTCTGGCCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 ENSMUST00000209343.2 ENSMUST00000209678.2 ENSMUST00000210447.2 ENSMUST00000211744.2 |
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| CDS CCA 90 bp | AGCAGACGGTACACAAAGCGCCCGTCCAGAACTGGAAAAGCTCAGTaGCCTGAGGGCCAGAAGGGCCCAGCTTGGCCTGGAGGGAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: SRRYTKRPSRTGKAQ*PEGQKGPAWPGGKG Trigger: CCCCTTCCCTCCAGGCCAAGCTGGGCCCTTCTGGCCCTCAGGCCACTGAGCTTTTCCAGTTCTGGACGGGCGCTTTGTGTACCGTCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209343.2 |
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| CDS TCA 90 bp | ATGCCTCTGGAACGAGTCAACTGCGTCTGGCGGTTCCACAAACGCTaGGAACTCTATCAGCTGCAGGCGGGCAGTGCCCAGGGCCCGAGC | + |
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Preference number: 5 (lower is better) Translates to: MPLERVNCVWRFHKR*ELYQLQAGSAQGPS Trigger: GCTCGGGCCCTGGGCACTGCCCGCCTGCAGCTGATAGAGTTCTCAGCGTTTGTGGAACCGCCAGACGCAGTTGACTCGTTCCAGAGGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CAA 90 bp | GAGGGGCCCTGTAGAACGGAGGCCCGTGCTGTACCTGTGAGCTCACTCCTGTCCCCAAAGGAGCAGACCTaGGAGGAGCAGGTGAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: EGPCRTEARAVPVSSLLSPKEQT*EEQVSV Trigger: GACACTCACCTGCTCCTCCAAGGTCTGCTCCTTTGG...GGACAGGAGTGAGCTCACAGGTACAGCACGGGCCTCCGTTCTACAGGGCCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CAA 90 bp | GAGGGGCCCTGTAGAACGGAGGCCCGTGCTGTACCTGTGAGCTCACTCCTGTCCCCTGAGTGTCCCTGTTaGTCACAACCTGGAGGATGG | + |
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Preference number: 5 (lower is better) Translates to: EGPCRTEARAVPVSSLLSPECPC*SQPGGW Trigger: CCATCCTCCAGGTTGTGACAAACAGGGACACTCAGG...GGACAGGAGTGAGCTCACAGGTACAGCACGGGCCTCCGTTCTACAGGGCCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS TCA 90 bp | GAAGGGCTTCACGTCTGGAACATTCCATGGTGGCCCAGAGCTCCCTaGCCAGAACTGGAAAAGCTCAGTGGCCTGAGGGCCAGAAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: EGLHVWNIPWWPRAP*PELEKLSGLRARRA Trigger: GGCCCTTCTGGCCCTCAGGCCACTGAGCTTTTCCAGTTCTGGTCAGGGAGCTCTGGGCCACCATGGAATGTTCCAGACGTGAAGCCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 ENSMUST00000209678.2 ENSMUST00000210447.2 |
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| CDS TCA 90 bp | ACGTCCACACTCTCTAGGGGTGGTGCTCCAGGGCTGGGACACTGCTaGCTGATGTGGACAAACAGATGCCTCTGGAACGAGTCAACTGCG | + |
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Preference number: 5 (lower is better) Translates to: TSTLSRGGAPGLGHC*LMWTNRCLWNESTA Trigger: CGCAGTTGACTCGTTCCAGAGGCATCTGTTTGTCCACATCAGTCAGCAGTGTCCCAGCCCTGGAGCACCACCCCTAGAGAGTGTGGACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CAA 90 bp | CGGTTCCTTTCTAAGAGGAGCCAGCCCCCGTGGCTCATGCTTCTGAGATTAGGCCCTGAGTGTCCCTGTTaGTCACAACCTGGAGGATGG | + |
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Preference number: 5 (lower is better) Translates to: RFLSKRSQPPWLMLLRLGPECPC*SQPGGW Trigger: CCATCCTCCAGGTTGTGACAAACAGGGACACTCAGG...GCCTAATCTCAGAAGCATGAGCCACGGGGGCTGGCTCCTCTTAGAAAGGAACCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CAA 90 bp | GGGAGAGGCAGATATGAGACACGTGGGAAGCAGGAAGGTTACAAGGCAGTCAGTCCAAAGGAGCAGACCTaGGAGGAGCAGGTGAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: GRGRYETRGKQEGYKAVSPKEQT*EEQVSV Trigger: GACACTCACCTGCTCCTCCAAGGTCTGCTCCTTTGG...ACTGACTGCCTTGTAACCTTCCTGCTTCCCACGTGTCTCATATCTGCCTCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CAA 90 bp | CAGGAGTGGTGTGTCCTGTCAAATGTTGTCTCTGAGGTCCTCGTGTTGGGGATCATCGTCTGGAAGGCCTaGTCCTTGGAGACTTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: QEWCVLSNVVSEVLVLGIIVWKA*SLETWS Trigger: GGACCAAGTCTCCAAGGACAAGGCCTTCCAGACGAT...GATCCCCAACACGAGGACCTCAGAGACAACATTTGACAGGACACACCACTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CAA 90 bp | GGGAGAGGCAGATATGAGACACGTGGGAAGCAGGAAGGTTACAAGGCAGTCAGTATCGTCTGGAAGGCCTaGTCCTTGGAGACTTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: GRGRYETRGKQEGYKAVSIVWKA*SLETWS Trigger: GGACCAAGTCTCCAAGGACAAGGCCTTCCAGACGAT...ACTGACTGCCTTGTAACCTTCCTGCTTCCCACGTGTCTCATATCTGCCTCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CAA 90 bp | TCAAACATAAACCATCACTCTTGGGGAAAGGAAGGTGGCAGGGTGGTCCAAGGCCCAAAGGAGCAGACCTaGGAGGAGCAGGTGAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: SNINHHSWGKEGGRVVQGPKEQT*EEQVSV Trigger: GACACTCACCTGCTCCTCCAAGGTCTGCTCCTTTGG...GCCTTGGACCACCCTGCCACCTTCCTTTCCCCAAGAGTGATGGTTTATGTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CAA 90 bp | TCAAACATAAACCATCACTCTTGGGGAAAGGAAGGTGGCAGGGTGGTCCAAGGCTTCCGGCCATACATCTaGCCCTCATCTGACAGGATG | + |
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Preference number: 5 (lower is better) Translates to: SNINHHSWGKEGGRVVQGFRPYI*PSSDRM Trigger: CATCCTGTCAGATGAGGGCAAGATGTATGGCCGGAA...GCCTTGGACCACCCTGCCACCTTCCTTTCCCCAAGAGTGATGGTTTATGTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033060.14 ENSMUST00000107801.10 |
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| CDS-3UTR CAA 90 bp | CAAGCTGGGAAAACATTATCTTCGGGTTGTGACGTCACAGTTCCCAGAGAAAGGATCGTCTGGAAGGCCTaGTCCTTGGAGACTTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: QAGKTLSSGCDVTVPRERIVWKA*SLETWS Trigger: GGACCAAGTCTCCAAGGACAAGGCCTTCCAGACGAT...CCTTTCTCTGGGAACTGTGACGTCACAACCCGAAGATAATGTTTTCCCAGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CAA 90 bp | GTGTCCTGTCAAATGTTGTCTCTGAGGTCCTCGTGTTGGGGATCTAAACTCAAACCTGAGTGTCCCTGTTaGTCACAACCTGGAGGATGG | + |
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Preference number: 5 (lower is better) Translates to: VSCQMLSLRSSCWGSKLKPECPC*SQPGGW Trigger: CCATCCTCCAGGTTGTGACAAACAGGGACACTCAGG...TTTGAGTTTAGATCCCCAACACGAGGACCTCAGAGACAACATTTGACAGGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS-3UTR CAA 90 bp | GTGTCCTGTCAAATGTTGTCTCTGAGGTCCTCGTGTTGGGGATCTAAACTCAAATTCCGGCCATACATCTaGCCCTCATCTGACAGGATG | + |
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Preference number: 5 (lower is better) Translates to: VSCQMLSLRSSCWGSKLKFRPYI*PSSDRM Trigger: CATCCTGTCAGATGAGGGCAAGATGTATGGCCGGAA...TTTGAGTTTAGATCCCCAACACGAGGACCTCAGAGACAACATTTGACAGGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033060.14 ENSMUST00000107801.10 |
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| CDS GCA 72 bp | CTCCAACGCCCTCGCTGCCTCCGGTGCCCTCTTCGCTaGCTTCCTCGCTACCTGTCCAGCCCCCGCCATCAT | + |
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Preference number: 6 (lower is better) Translates to: LQRPRCLRCPLR*LPRYLSSPRHH Trigger: ATGATGGCGGGGGCTGGACAGGTAGCGAGGAAGGCAGCGAAGAGGGCACCGGAGGCAGCGAGGGCGTTGGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 ENSMUST00000209343.2 ENSMUST00000209437.2 ENSMUST00000210447.2 ENSMUST00000211744.2 |
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| CDS GCA 72 bp | GGCTGCCATCACCTCCAACGCCCTCGCTGCCTCCGGTaGCCTCTTCGCTGCCTTCCTCGCTACCTGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GCHHLQRPRCLR*PLRCLPRYLSS Trigger: GCTGGACAGGTAGCGAGGAAGGCAGCGAAGAGGGCACCGGAGGCAGCGAGGGCGTTGGAGGTGATGGCAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 ENSMUST00000209343.2 ENSMUST00000209437.2 ENSMUST00000210447.2 ENSMUST00000211744.2 |
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| CDS GCA 72 bp | GGCTGCTCACTCCATAGAAGCCACCGCCACCTCCGCTaGTCCCTGCCTCCTCGGCACTGGGGCCCCAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: GCSLHRSHRHLR*SLPPRHWGPSS Trigger: TGAACTGGGGCCCCAGTGCCGAGGAGGCAGGGAGCAGCGGAGGTGGCGGTGGCTTCTATGGAGTGAGCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 ENSMUST00000209478.2 |
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| CDS GCA 72 bp | TCTGGCGGTTCCACAAACGCTGAGAACTCTATCAGCTaGAGGCGGGCAGTGCCCAGGGCCCGAGCCTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: SGGSTNAENSIS*RRAVPRARACQ Trigger: CTGGCAGGCTCGGGCCCTGGGCACTGCCCGCCTGCAGCTGATAGAGTTCTCAGCGTTTGTGGAACCGCCAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 ENSMUST00000210447.2 |
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| CDS TCA 72 bp | GAACGAGTCAACTGCGTCTGGCGGTTCCACAAACGCTaGGAACTCTATCAGCTGCAGGCGGGCAGTGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: ERVNCVWRFHKR*ELYQLQAGSAQ Trigger: CTGGGCACTGCCCGCCTGCAGCTGATAGAGTTCTCAGCGTTTGTGGAACCGCCAGACGCAGTTGACTCGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS TCA 72 bp | CTAGGGGTGGTGCTCCAGGGCTGGGACACTGCTGACTaGTGTGGACAAACAGATGCCTCTGGAACGAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: LGVVLQGWDTAD*CGQTDASGTSQ Trigger: TTGACTCGTTCCAGAGGCATCTGTTTGTCCACATCAGTCAGCAGTGTCCCAGCCCTGGAGCACCACCCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 |
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| CDS CCA 72 bp | CTCTCGATTTCCTTCGAGCCAAAACCTGAATATGGCTaGAGACCTGCTTTCGCGTTCTCGTCTTCCCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LSISFEPKPEYG*RPAFAFSSSLS Trigger: GGACAGGGAAGACGAGAACGCGAAAGCAGGTCTCCAGCCATATTCAGGTTTTGGCTCGAAGGAAATCGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000033060.14 ENSMUST00000097216.5 ENSMUST00000107801.10 ENSMUST00000209343.2 ENSMUST00000209678.2 ENSMUST00000210447.2 ENSMUST00000211744.2 |
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