Pregenerated sensors for TEAD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055320Ensembl transcript IDs: ENSMUST00000059768.18, ENSMUST00000069256.12, ENSMUST00000084705.13, ENSMUST00000106638.10, ENSMUST00000164363.9, ENSMUST00000165036.8, ENSMUST00000167060.2, ENSMUST00000168981.8, ENSMUST00000170352.9, ENSMUST00000171197.8, ENSMUST00000239404.2, ENSMUST00000239442.2
Found 493 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TCGCAGGGCTCCCCGCTGCCACACTGCTGTACAGGACAGTGGTGGTaGGGTTCCCCATTGGCAGGCAGACTCACAGCAGGCAGGGACCAC | + |
Preference number: 1 (lower is better) Translates to: SQGSPLPHCCTGQWW*GSPLAGRLTAGRDH Trigger: GTGGTCCCTGCCTGCTGTGAGTCTGCCTGCCAATGGGGAACCCCACCACCACTGTCCTGTACAGCAGTGTGGCAGCGGGGAGCCCTGCGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR GCA 90 bp | GGGGGAAGGCAGAGCCATGGTGTCTGCCCACTGGCCGGGATTCGGTaGTTGCGCATAAGTTCCTTCCCAGGGATGCAGAGCCGGGTGATG | + |
Preference number: 1 (lower is better) Translates to: GGRQSHGVCPLAGIR*LRISSFPGMQSRVM Trigger: CATCACCCGGCTCTGCATCCCTGGGAAGGAACTTATGCGCAAGCACCGAATCCCGGCCAGTGGGCAGACACCATGGCTCTGCCTTCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CCA 90 bp | CGCTGCCACACTGCTGTACAGGACAGTGGTGGTGGGGTTCCCCATTaGCAGGCAGACTCACAGCAGGCAGGGACCACACGTTGCTCGGTG | + |
Preference number: 1 (lower is better) Translates to: RCHTAVQDSGGGVPH*QADSQQAGTTRCSV Trigger: CACCGAGCAACGTGTGGTCCCTGCCTGCTGTGAGTCTGCCTGCCAATGGGGAACCCCACCACCACTGTCCTGTACAGCAGTGTGGCAGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR TCA 90 bp | GGAAGAAGAGGACAGTGGGGCAGCCGACACACCACCCTGACTCTGTaGCATCTTTGCCAGCCCACTGCCAACCACTATCCTCTAGCTGGT | + |
Preference number: 1 (lower is better) Translates to: GRRGQWGSRHTTLTL*HLCQPTANHYPLAG Trigger: ACCAGCTAGAGGATAGTGGTTGGCAGTGGGCTGGCAAAGATGTCACAGAGTCAGGGTGGTGTGTCGGCTGCCCCACTGTCCTCTTCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR TCA 90 bp | CCAGGCGAGGCCAAAGATGGAAGAGAAGCCCTCACCCTTGTCCTGTaGCTAAATAGCTGGGAGCCTGGACCAGACACCTCTCATCCCTTC | + |
Preference number: 1 (lower is better) Translates to: PGEAKDGREALTLVL*LNSWEPGPDTSHPF Trigger: GAAGGGATGAGAGGTGTCTGGTCCAGGCTCCCAGCTATTTAGTCACAGGACAAGGGTGAGGGCTTCTCTTCCATCTTTGGCCTCGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CCA 90 bp | CAATCTATCCACAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTaGGGAGCAGAGACACCAAGCCTGATGAGCCTTCTGCTTGCTCGG | + |
Preference number: 1 (lower is better) Translates to: QSIHRLARKLVTVTF*GAETPSLMSLLLAR Trigger: CCGAGCAAGCAGAAGGCTCATCAGGCTTGGTGTCTCTGCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTGTGGATAGATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR TCA 90 bp | TTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATaGGTATATGGGCAGCACAAATTGGCCACGGTGGGTGTGCTGGCT | + |
Preference number: 1 (lower is better) Translates to: FLAGLTMFQWMSPHL*VYGQHKLATVGVLA Trigger: AGCCAGCACACCCACCGTGGCCAATTTGTGCTGCCCATATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR TCA 90 bp | GCTTCTGATACGGGGCCAATTAGCAAGTGGGCACCCAGAACAGGCTaGGAAAAGGCTGGCGGCTACAAGGTAGTACTAAGGCACGGCTTT | + |
Preference number: 1 (lower is better) Translates to: ASDTGPISKWAPRTG*EKAGGYKVVLRHGF Trigger: AAAGCCGTGCCTTAGTACTACCTTGTAGCCGCCAGCCTTTTCTCAGCCTGTTCTGGGTGCCCACTTGCTAATTGGCCCCGTATCAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR TCA 90 bp | GAGAAGAGACAAAATGTCCGTAGTAAGAACCGACAAGGGCCAGGCTaGGCAAGGCTGGGTATGACAGGTCTAGTGGGACCTGACCCCATG | + |
Preference number: 1 (lower is better) Translates to: EKRQNVRSKNRQGPG*ARLGMTGLVGPDPM Trigger: CATGGGGTCAGGTCCCACTAGACCTGTCATACCCAGCCTTGCTCAGCCTGGCCCTTGTCGGTTCTTACTACGGACATTTTGTCTCTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR GCA 90 bp | ATTGGCAGGCAGACTCACAGCAGGCAGGGACCACACGTTGCTCGGTaGTCTCATGAATACAAGCCTGCGGTTGGTTATTCATCCCGGTTA | + |
Preference number: 1 (lower is better) Translates to: IGRQTHSRQGPHVAR*SHEYKPAVGYSSRL Trigger: TAACCGGGATGAATAACCAACCGCAGGCTTGTATTCATGAGAGCACCGAGCAACGTGTGGTCCCTGCCTGCTGTGAGTCTGCCTGCCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CCA 90 bp | GCGCAAGAACACAGAGCTAGAGCCACAGATGCTTCCTATGCACGCTaGGTTACCAGCAACAATCTATCCACAGGCTGGCCAGGAAGCTTG | + |
Preference number: 1 (lower is better) Translates to: AQEHRARATDASYAR*VTSNNLSTGWPGSL Trigger: CAAGCTTCCTGGCCAGCCTGTGGATAGATTGTTGCTGGTAACCCAGCGTGCATAGGAAGCATCTGTGGCTCTAGCTCTGTGTTCTTGCGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CCA 90 bp | TTTAGGAAGCTGAGAAGAGGGAAGAAGGAGCCAGGGATTAGAGACTaGGATGAGAGGTTAGAACATGACCTCCCGCCCCAAACCCAGGCT | + |
Preference number: 1 (lower is better) Translates to: FRKLRRGKKEPGIRD*DERLEHDLPPQTQA Trigger: AGCCTGGGTTTGGGGCGGGAGGTCATGTTCTAACCTCTCATCCCAGTCTCTAATCCCTGGCTCCTTCTTCCCTCTTCTCAGCTTCCTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR TCA 90 bp | TCCTTTGAGGGCTGGCTTAGAAACAGGGAACCTAGGCTGTTCTCCTaGGGAGAACCAGTGCCCCATTGGCTTTACATAAGGGAGGCACAT | + |
Preference number: 1 (lower is better) Translates to: SFEGWLRNREPRLFS*GEPVPHWLYIREAH Trigger: ATGTGCCTCCCTTATGTAAAGCCAATGGGGCACTGGTTCTCCTCAGGAGAACAGCCTAGGTTCCCTGTTTCTAAGCCAGCCCTCAAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CCA 90 bp | AGATCTGCTTCGTCCCTAAAGATGGAAGAGATAGGACAGACAGCATaGAGCATGAGGCGGACAGCAGAAACAGTGTCGAGGAGACAGACC | + |
Preference number: 1 (lower is better) Translates to: RSASSLKMEEIGQTA*SMRRTAETVSRRQT Trigger: GGTCTGTCTCCTCGACACTGTTTCTGCTGTCCGCCTCATGCTCCATGCTGTCTGTCCTATCTCTTCCATCTTTAGGGACGAAGCAGATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR GCA 90 bp | GCAGGAGAGGCCTCTAACAGAGGAAAGGATGCTGCTGAAGAATCCTaGCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGG | + |
Preference number: 1 (lower is better) Translates to: AGEASNRGKDAAEES*HFLLLDLEKLRDWG Trigger: CCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTCTTCAGCAGCATCCTTTCCTCTGTTAGAGGCCTCTCCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CCA 90 bp | GCTGAGCAAGCCATGAGGAGAAAGCCAGTAAGTAGCACTCCTTCATaGTCTCTGTATCAACTTGTAGTCTCAGGTTCCTGCCCTGACTGC | + |
Preference number: 1 (lower is better) Translates to: AEQAMRRKPVSSTPS*SLYQLVVSGSCPDC Trigger: GCAGTCAGGGCAGGAACCTGAGACTACAAGTTGATACAGAGACCATGAAGGAGTGCTACTTACTGGCTTTCTCCTCATGGCTTGCTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CCA 90 bp | AGTTGGCTGAGGGCTAGAATGTCCTTGAAAATGCCGAGTTGCAAATaGTGTGCTCTTCGCAAGTCCCTCACAGCACATTCGGACATCCAG | + |
Preference number: 1 (lower is better) Translates to: SWLRARMSLKMPSCK*CALRKSLTAHSDIQ Trigger: CTGGATGTCCGAATGTGCTGTGAGGGACTTGCGAAGAGCACACCATTTGCAACTCGGCATTTTCAAGGACATTCTAGCCCTCAGCCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CCA 90 bp | TCTTGCTTCCCCAGTGAAAAAGCACTTAGGGAAGTAACCCGAGGCTaGCCACATCAGACCAACTCTGCAGGGCAATGCTTTGGAATATTC | + |
Preference number: 1 (lower is better) Translates to: SCFPSEKALREVTRG*PHQTNSAGQCFGIF Trigger: GAATATTCCAAAGCATTGCCCTGCAGAGTTGGTCTGATGTGGCCAGCCTCGGGTTACTTCCCTAAGTGCTTTTTCACTGGGGAAGCAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR TCA 90 bp | GCTCTACTCCTGAGTGACAGACCCCTCCCCCATCCCATTCTGAGATaGCAGATAGCCACAGGAGATCATTTGTACCCATTCATTCATATC | + |
Preference number: 1 (lower is better) Translates to: ALLLSDRPLPHPILR*QIATGDHLYPFIHI Trigger: GATATGAATGAATGGGTACAAATGATCTCCTGTGGCTATCTGTCATCTCAGAATGGGATGGGGGAGGGGTCTGTCACTCAGGAGTAGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR GCA 90 bp | TACTTTCCTCTTATCTTCCCTGGGAAGTGGAGGGTTAACCTTTCTTaGTTCCCCAGTGAAAAAGCACTTAGGGAAGTAACCCGAGGCTGG | + |
Preference number: 1 (lower is better) Translates to: YFPLIFPGKWRVNLS*FPSEKALREVTRGW Trigger: CCAGCCTCGGGTTACTTCCCTAAGTGCTTTTTCACTGGGGAAGCAAGAAAGGTTAACCCTCCACTTCCCAGGGAAGATAAGAGGAAAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR GCA 90 bp | TTAAAGAGTTGGCTGAGGGCTAGAATGTCCTTGAAAATGCCGAGTTaGAAATGGTGTGCTCTTCGCAAGTCCCTCACAGCACATTCGGAC | + |
Preference number: 1 (lower is better) Translates to: LKSWLRARMSLKMPS*KWCALRKSLTAHSD Trigger: GTCCGAATGTGCTGTGAGGGACTTGCGAAGAGCACACCATTTGCAACTCGGCATTTTCAAGGACATTCTAGCCCTCAGCCAACTCTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CCA 90 bp | GAACCAGTGCCCCATTGGCTTTACATAAGGGAGGCACATTGCAAATaGAAACATCTTGCACATTCTTCTCTGGTCTTCCCAGGGATGAGG | + |
Preference number: 1 (lower is better) Translates to: EPVPHWLYIREAHCK*KHLAHSSLVFPGMR Trigger: CCTCATCCCTGGGAAGACCAGAGAAGAATGTGCAAGATGTTTCCATTTGCAATGTGCCTCCCTTATGTAAAGCCAATGGGGCACTGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR GCA 90 bp | CTTTTTAAACCCTGGGAAAGAGTAGGCTGTAAGTCAAATCAGAAATaGTCTTTAAAGAGGAGTCAGATGGCTACAGGGAGGCTGCTGGCC | + |
Preference number: 1 (lower is better) Translates to: LFKPWERVGCKSNQK*SLKRSQMATGRLLA Trigger: GGCCAGCAGCCTCCCTGTAGCCATCTGACTCCTCTTTAAAGAGCATTTCTGATTTGACTTACAGCCTACTCTTTCCCAGGGTTTAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR GCA 90 bp | TCTTTTCGTTTGAGTATGAGGCACCTTCTGGAACAGATCCAGATCTaGTTCGTCCCTAAAGATGGAAGAGATAGGACAGACAGCATGGAG | + |
Preference number: 1 (lower is better) Translates to: SFRLSMRHLLEQIQI*FVPKDGRDRTDSME Trigger: CTCCATGCTGTCTGTCCTATCTCTTCCATCTTTAGGGACGAAGCAGATCTGGATCTGTTCCAGAAGGTGCCTCATACTCAAACGAAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR TCA 90 bp | CACAAGCCCATCCTATACACTTTACACGAGACAACAGAGAAGCCATaGAGTCGCTTAGAATCCGAAGGAACACACGTGGCAAAAACCAAT | + |
Preference number: 1 (lower is better) Translates to: HKPILYTLHETTEKP*SRLESEGTHVAKTN Trigger: ATTGGTTTTTGCCACGTGTGTTCCTTCGGATTCTAAGCGACTTCATGGCTTCTCTGTTGTCTCGTGTAAAGTGTATAGGATGGGCTTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CCA 90 bp | GGTAGCTGGACTCTGGGCATCCCAGGACATGTTCTGAAGAAGTTTTaGGTGGATTTTTATGTCTCTTTCATTGGAAAGATGGCCTTTACA | + |
Preference number: 1 (lower is better) Translates to: GSWTLGIPGHVLKKF*VDFYVSFIGKMAFT Trigger: TGTAAAGGCCATCTTTCCAATGAAAGAGACATAAAAATCCACCCAAAACTTCTTCAGAACATGTCCTGGGATGCCCAGAGTCCAGCTACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CCA 90 bp | TGGCACTTTCTAAGCTGGAATCTCGAGCCAAAGGCACTTTCAAGCTaGAGTGCAGAAGATTCACAAATAGCTAAGTATTTGGTCATGGAT | + |
Preference number: 1 (lower is better) Translates to: WHFLSWNLEPKALSS*SAEDSQIAKYLVMD Trigger: ATCCATGACCAAATACTTAGCTATTTGTGAATCTTCTGCACTCCAGCTTGAAAGTGCCTTTGGCTCGAGATTCCAGCTTAGAAAGTGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGGGGAAGGCAGAGCCATaGTGTCTGCCCACTGGCCGG | + |
Preference number: 2 (lower is better) Translates to: SRGQFQSPERLFLRHQGGGKAEP*CLPTGR Trigger: CCGGCCAGTGGGCAGACACCATGGCTCTGCCTTCCC...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | ACAATCTATCCACAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCGGTCAGGGTGGGACCTaGGGGGCCAGGGTAGCACCC | + |
Preference number: 2 (lower is better) Translates to: TIYPQAGQEACDSDILGSGQGGT*GARVAP Trigger: GGGTGCTACCCTGGCCCCCCAGGTCCCACCCTGACC...GCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTGTGGATAGATTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTGGGAAGGCAGAGCCATaGTGTCTGCCCACTGGCCGG | + |
Preference number: 2 (lower is better) Translates to: ERLFLRHQGGAERRVCGSGKAEP*CLPTGR Trigger: CCGGCCAGTGGGCAGACACCATGGCTCTGCCTTCCC...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTGGTCAGGGTGGGACCTaGGGGGCCAGGGTAGCACCC | + |
Preference number: 2 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFGQGGT*GARVAP Trigger: GGGTGCTACCCTGGCCCCCCAGGTCCCACCCTGACC...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTAGCTCTACTCCTGAGTaGCAGACCCCTCCCCCATCC | + |
Preference number: 2 (lower is better) Translates to: ERLFLRHQGGAERRVCGSSSTPE*QTPPPS Trigger: GGATGGGGGAGGGGTCTGTCACTCAGGAGTAGAGCT...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTACAGGACAGTGGTGGTaGGGTTCCCCATTGGCAGGC | + |
Preference number: 2 (lower is better) Translates to: ERLFLRHQGGAERRVCGSTGQWW*GSPLAG Trigger: GCCTGCCAATGGGGAACCCCACCACCACTGTCCTGT...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTGCTGCAGGAAAGAGATaGTGGCTGTGCAGGAGAGGC | + |
Preference number: 2 (lower is better) Translates to: ERLFLRHQGGAERRVCGSAAGKR*WLCRRG Trigger: GCCTCTCCTGCACAGCCACCATCTCTTTCCTGCAGC...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGAAGCTCTACTCCTGAGTaGCAGACCCCTCCCCCATCC | + |
Preference number: 2 (lower is better) Translates to: MTGLVGPDPMVVNELGARSSTPE*QTPPPS Trigger: GGATGGGGGAGGGGTCTGTCACTCAGGAGTAGAGCT...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTAGACAGCATGGAGCATaGGGCGGACAGCAGAAACAG | + |
Preference number: 2 (lower is better) Translates to: ERLFLRHQGGAERRVCGSRQHGA*GGQQKQ Trigger: CTGTTTCTGCTGTCCGCCTCATGCTCCATGCTGTCT...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGCTAGGGGATCCGAACTaGCTCTGTCCATGCATTCTC | + |
Preference number: 2 (lower is better) Translates to: SRGQFQSPERLFLRHQGGLGDPN*LCPCIL Trigger: GAGAATGCATGGACAGAGTCAGTTCGGATCCCCTAG...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTACTGGTCCAGAATGTTaGTGGCCTCCAGGTAGCTGG | + |
Preference number: 2 (lower is better) Translates to: ERLFLRHQGGAERRVCGSTGPEC*WPPGSW Trigger: CCAGCTACCTGGAGGCCAGCAACATTCTGGACCAGT...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGAGGAAGAAGAGGACAGTaGGGCAGCCGACACACCACC | + |
Preference number: 2 (lower is better) Translates to: MTGLVGPDPMVVNELGARGRRGQ*GSRHTT Trigger: GGTGGTGTGTCGGCTGCCCCACTGTCCTCTTCTTCC...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | AGAAAGAGCTGCAGGAAAGAGATGGTGGCTGTGCAGGAGAGGCCTCTAACAGAGGGAAGAAGAGGACAGTaGGGCAGCCGACACACCACC | + |
Preference number: 2 (lower is better) Translates to: RKSCRKEMVAVQERPLTEGRRGQ*GSRHTT Trigger: GGTGGTGTGTCGGCTGCCCCACTGTCCTCTTCTTCC...CTCTGTTAGAGGCCTCTCCTGCACAGCCACCATCTCTTTCCTGCAGCTCTTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CAA 90 bp | GGTTCCCCATTGGCAGGCAGACTCACAGCAGGCAGGGACCACACGTaGCTCGGTGCTCTCATGAATACAAGCCTGCGGTTGGTTATTCAT | + |
Preference number: 2 (lower is better) Translates to: GSPLAGRLTAGRDHT*LGALMNTSLRLVIH Trigger: ATGAATAACCAACCGCAGGCTTGTATTCATGAGAGCACCGAGCAACGTGTGGTCCCTGCCTGCTGTGAGTCTGCCTGCCAATGGGGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR TCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTAGCTCTACTCCTGAGTaGCAGACCCCTCCCCCATCC | + |
Preference number: 2 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFSSTPE*QTPPPS Trigger: GGATGGGGGAGGGGTCTGTCACTCAGGAGTAGAGCT...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR TCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTCTCAGGTTCCTGCCCTaGCTGCCTTCAGTGATGGGC | + |
Preference number: 2 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFLRFLP*LPSVMG Trigger: GCCCATCACTGAAGGCAGTCAGGGCAGGAACCTGAG...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR TCA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTGGTTCCTGGCAGGCTTaGCCATGTTCCAATGGATGT | + |
Preference number: 2 (lower is better) Translates to: ERLFLRHQGGAERRVCGSGSWQA*PCSNGC Trigger: ACATCCATTGGAACATGGTCAAGCCTGCCAGGAACC...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR GCA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGCCAGCCACAGGACTCTaGATCCTTTGCAACTCAACA | + |
Preference number: 2 (lower is better) Translates to: SRGQFQSPERLFLRHQGGPATGL*ILCNST Trigger: TGTTGAGTTGCAAAGGATGCAGAGTCCTGTGGCTGG...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR GCA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGCACAGATGCTTCCTATaGACGCTGGGTTACCAGCAA | + |
Preference number: 2 (lower is better) Translates to: SRGQFQSPERLFLRHQGGHRCFL*TLGYQQ Trigger: TTGCTGGTAACCCAGCGTGCATAGGAAGCATCTGTG...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CCA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGGTACGGCCAATTAACTaGTCCAGAATGTTGCTGGCC | + |
Preference number: 2 (lower is better) Translates to: SRGQFQSPERLFLRHQGGVRPIN*SRMLLA Trigger: GGCCAGCAACATTCTGGACCAGTTAATTGGCCGTAC...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CCA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGGAGACAGACCCTATCTaGAAAAGGATGAGGAGGAGG | + |
Preference number: 2 (lower is better) Translates to: SRGQFQSPERLFLRHQGGETDPI*KRMRRR Trigger: CCTCCTCCTCATCCTTTTCCAGATAGGGTCTGTCTC...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGCCAAGGGTTTTCTTTTaGCTGGTGTGTGGACAGGAC | + |
Preference number: 2 (lower is better) Translates to: SRGQFQSPERLFLRHQGGPRVFF*LVCGQD Trigger: GTCCTGTCCACACACCAGCCAAAAGAAAACCCTTGG...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR TCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTGCCGACACACCACCCTaGCTCTGTGACATCTTTGCC | + |
Preference number: 2 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFADTPP*LCDIFA Trigger: GGCAAAGATGTCACAGAGTCAGGGTGGTGTGTCGGC...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR TCA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATACTCAGGTTCCTGCCCTaGCTGCCTTCAGTGATGGGC | + |
Preference number: 2 (lower is better) Translates to: VPGRLDHVPMDVPTPMSILRFLP*LPSVMG Trigger: GCCCATCACTGAAGGCAGTCAGGGCAGGAACCTGAG...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | CAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCAGAGACACCAAGCCAGCCACAGGACTCTaGATCCTTTGCAACTCAACA | + |
Preference number: 2 (lower is better) Translates to: QAGQEACDSDILGSRDTKPATGL*ILCNST Trigger: TGTTGAGTTGCAAAGGATGCAGAGTCCTGTGGCTGG...CTTGGTGTCTCTGCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTGAAACAAAAGGCGCTTaGTTCAGCCTCGCCATCATC | + |
Preference number: 2 (lower is better) Translates to: ERLFLRHQGGAERRVCGSETKGA*FSLAII Trigger: GATGATGGCGAGGCTGAAGCAAGCGCCTTTTGTTTC...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACAAGGCTGAGGGGCTCCTaGGAGTGGATGGGTCTAGGG | + |
Preference number: 2 (lower is better) Translates to: DQMKCLRHKPILYTLHETRLRGS*EWMGLG Trigger: CCCTAGACCCATCCACTCTCAGGAGCCCCTCAGCCT...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGATCTTTGCCAGCCCACTaGCAACCACTATCCTCTAGC | + |
Preference number: 2 (lower is better) Translates to: MTGLVGPDPMVVNELGARSLPAH*QPLSSS Trigger: GCTAGAGGATAGTGGTTGGCAGTGGGCTGGCAAAGA...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTACTGGTCCAGAATGTTaGTGGCCTCCAGGTAGCTGG | + |
Preference number: 2 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFTGPEC*WPPGSW Trigger: CCAGCTACCTGGAGGCCAGCAACATTCTGGACCAGT...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGACACCTATGAGTATATaGGCAGCACAAATTGGCCAC | + |
Preference number: 2 (lower is better) Translates to: SRGQFQSPERLFLRHQGGTPMSI*AAQIGH Trigger: GTGGCCAATTTGTGCTGCCCATATACTCATAGGTGT...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGATAAGCAGTCAGAGCTaGTGCTGGGGCAAAGAGGTG | + |
Preference number: 2 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRISSQS*CWGKEV Trigger: CACCTCTTTGCCCCAGCATCAGCTCTGACTGCTTAT...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTACTGTCCCAGTCACTGTaGGACAGCTCTGGGGAGGGA | + |
Preference number: 2 (lower is better) Translates to: DVWILPTSFRERRDKMSVLSQSL*DSSGEG Trigger: TCCCTCCCCAGAGCTGTCTCACAGTGACTGGGACAG...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTCTAGGGGATCCGAACTaGCTCTGTCCATGCATTCTC | + |
Preference number: 2 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFLGDPN*LCPCIL Trigger: GAGAATGCATGGACAGAGTCAGTTCGGATCCCCTAG...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACAGCACCCAGAACAGGCTaGGAAAAGGCTGGCGGCTAC | + |
Preference number: 2 (lower is better) Translates to: DQMKCLRHKPILYTLHETAPRTG*EKAGGY Trigger: GTAGCCGCCAGCCTTTTCTCAGCCTGTTCTGGGTGC...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGAATCGACTTGGGTTCTaGTTCAGGTTGTTTGAAACC | + |
Preference number: 2 (lower is better) Translates to: SRGQFQSPERLFLRHQGGNRLGF*FRLFET Trigger: GGTTTCAAACAACCTGAATCAGAACCCAAGTCGATT...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGACAAACGAGACAGCAATaGCTAGAGAGAGGCACGAGA | + |
Preference number: 2 (lower is better) Translates to: MTGLVGPDPMVVNELGARQTRQQ*LERGTR Trigger: TCTCGTGCCTCTCTCTAGTCATTGCTGTCTCGTTTG...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGCAAGGAATTGTGGGTTaGAGATCTGAGGAATACACA | + |
Preference number: 2 (lower is better) Translates to: SRGQFQSPERLFLRHQGGQGIVG*RSEEYT Trigger: TGTGTATTCCTCAGATCTGCAACCCACAATTCCTTG...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAAGGTCAGGGTGGGACCTaGGGGGCCAGGGTAGCACCC | + |
Preference number: 2 (lower is better) Translates to: ETKSSASYRAGFKNGLLKGQGGT*GARVAP Trigger: GGGTGCTACCCTGGCCCCCCAGGTCCCACCCTGACC...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | AGAAAGAGCTGCAGGAAAGAGATGGTGGCTGTGCAGGAGAGGCCTCTAACAGAGGTAAAAATAAGAAGGTaGGGGAAGAGTGTGGGCGGG | + |
Preference number: 2 (lower is better) Translates to: RKSCRKEMVAVQERPLTEVKIRR*GKSVGG Trigger: CCCGCCCACACTCTTCCCCCACCTTCTTATTTTTAC...CTCTGTTAGAGGCCTCTCCTGCACAGCCACCATCTCTTTCCTGCAGCTCTTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTACACCTATGAGTATATaGGCAGCACAAATTGGCCAC | + |
Preference number: 2 (lower is better) Translates to: ERLFLRHQGGAERRVCGSTPMSI*AAQIGH Trigger: GTGGCCAATTTGTGCTGCCCATATACTCATAGGTGT...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGAGTACGGCCAATTAACTaGTCCAGAATGTTGCTGGCC | + |
Preference number: 2 (lower is better) Translates to: MTGLVGPDPMVVNELGARVRPIN*SRMLLA Trigger: GGCCAGCAACATTCTGGACCAGTTAATTGGCCGTAC...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGACCAAGGGTTTTCTTTTaGCTGGTGTGTGGACAGGAC | + |
Preference number: 2 (lower is better) Translates to: MTGLVGPDPMVVNELGARPRVFF*LVCGQD Trigger: GTCCTGTCCACACACCAGCCAAAAGAAAACCCTTGG...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGAAGGCACTTTCAAGCTaGAGTGCAGAAGATTCACAA | + |
Preference number: 2 (lower is better) Translates to: SRGQFQSPERLFLRHQGGKALSS*SAEDSQ Trigger: TTGTGAATCTTCTGCACTCCAGCTTGAAAGTGCCTT...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTAGGTGGGGTTCCCCATTaGCAGGCAGACTCACAGCAG | + |
Preference number: 2 (lower is better) Translates to: DVWILPTSFRERRDKMSVGGVPH*QADSQQ Trigger: CTGCTGTGAGTCTGCCTGCCAATGGGGAACCCCACC...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTCACACTTTAAAGAGTTaGCTGAGGGCTAGAATGTCC | + |
Preference number: 2 (lower is better) Translates to: ERLFLRHQGGAERRVCGSHTLKS*LRARMS Trigger: GGACATTCTAGCCCTCAGCCAACTCTTTAAAGTGTG...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CAA 90 bp | GGTCTGCAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTaGAGGGCTGGCTTAGAAACAGGGAACCTAGGCTGTTCTCCTGAG | + |
Preference number: 2 (lower is better) Translates to: GLQTDKGEKLRVAIP*RAGLETGNLGCSPE Trigger: CTCAGGAGAACAGCCTAGGTTCCCTGTTTCTAAGCCAGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTGCAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | CAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCAGAGACACCAAGTGTCTTCCTCCTTTGTaGCACCTGTTTCAAGAGTTT | + |
Preference number: 2 (lower is better) Translates to: QAGQEACDSDILGSRDTKCLPPL*HLFQEF Trigger: AAACTCTTGAAACAGGTGTCACAAAGGAGGAAGACA...CTTGGTGTCTCTGCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GGTCTGCAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTATAAGCAGTCAGAGCTaGTGCTGGGGCAAAGAGGTG | + |
Preference number: 2 (lower is better) Translates to: GLQTDKGEKLRVAIPLRAISSQS*CWGKEV Trigger: CACCTCTTTGCCCCAGCATCAGCTCTGACTGCTTAT...AGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTGCAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | CAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCAGAGACACCAAGCAAGGAATTGTGGGTTaGAGATCTGAGGAATACACA | + |
Preference number: 2 (lower is better) Translates to: QAGQEACDSDILGSRDTKQGIVG*RSEEYT Trigger: TGTGTATTCCTCAGATCTGCAACCCACAATTCCTTG...CTTGGTGTCTCTGCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTCACAGATGCTTCCTATaGACGCTGGGTTACCAGCAA | + |
Preference number: 2 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFHRCFL*TLGYQQ Trigger: TTGCTGGTAACCCAGCGTGCATAGGAAGCATCTGTG...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTAACTCTGCAGGGCAATaGTTTGGAATATTCTCTTGG | + |
Preference number: 2 (lower is better) Translates to: ERLFLRHQGGAERRVCGSNSAGQ*FGIFSW Trigger: CCAAGAGAATATTCCAAAGCATTGCCCTGCAGAGTT...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGAATCTTCCCTGGGAAGTaGAGGGTTAACCTTTCTTGC | + |
Preference number: 2 (lower is better) Translates to: MTGLVGPDPMVVNELGARIFPGK*RVNLSC Trigger: GCAAGAAAGGTTAACCCTCCACTTCCCAGGGAAGAT...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTTCATTCATATCTTCCTaGTCTCAAGACACAGGGGTT | + |
Preference number: 2 (lower is better) Translates to: ERLFLRHQGGAERRVCGSSFISS*SQDTGV Trigger: AACCCCTGTGTCTTGAGACCAGGAAGATATGAATGA...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CCA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGGTAAAAATAAGAAGGTaGGGGAAGAGTGTGGGCGGG | + |
Preference number: 2 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRVKIRR*GKSVGG Trigger: CCCGCCCACACTCTTCCCCCACCTTCTTATTTTTAC...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CCA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGGTGGAGATATGGGTGTaGTGTAAAAATAAGAAGGTG | + |
Preference number: 2 (lower is better) Translates to: SRGQFQSPERLFLRHQGGVEIWV*CKNKKV Trigger: CACCTTCTTATTTTTACACCACACCCATATCTCCAC...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTAGAAGTTGGGAGGGGTaGAGATATGGGTGTGGTGTA | + |
Preference number: 2 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFRSWEG*RYGCGV Trigger: TACACCACACCCATATCTCCACCCCTCCCAACTTCT...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACAGCAGGAAAGAGATGGTaGCTGTGCAGGAGAGGCCTC | + |
Preference number: 2 (lower is better) Translates to: DQMKCLRHKPILYTLHETAGKRW*LCRRGL Trigger: GAGGCCTCTCCTGCACAGCCACCATCTCTTTCCTGC...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGATGGATACAAATCACGTaGGCAATTTCAGAGCCCGGA | + |
Preference number: 2 (lower is better) Translates to: MTGLVGPDPMVVNELGARWIQIT*AISEPG Trigger: TCCGGGCTCTGAAATTGCCCACGTGATTTGTATCCA...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR TCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGAGAGCAACTAGCAAATTaGCAAGAAACAGGAGCTCAG | + |
Preference number: 2 (lower is better) Translates to: MTGLVGPDPMVVNELGAREQLAN*QETGAQ Trigger: CTGAGCTCCTGTTTCTTGTCAATTTGCTAGTTGCTC...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | CAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTGGCTTAATAAGCAGTCAGAGCTaGTGCTGGGGCAAAGAGGTG | + |
Preference number: 2 (lower is better) Translates to: QTDKGEKLRVAIPLRAGLISSQS*CWGKEV Trigger: CACCTCTTTGCCCCAGCATCAGCTCTGACTGCTTAT...TAAGCCAGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACAGCGGCATCCACCCACTaGGGACCAAAGATGCTGAAT | + |
Preference number: 2 (lower is better) Translates to: DQMKCLRHKPILYTLHETAASTH*GPKMLN Trigger: ATTCAGCATCTTTGGTCCTCAGTGGGTGGATGCCGC...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGATCCCAGGACATGTTCTaGAGAAGTTTTGGGTGGATT | + |
Preference number: 2 (lower is better) Translates to: MTGLVGPDPMVVNELGARSQDMF*RSFGWI Trigger: AATCCACCCAAAACTTCTTCAGAACATGTCCTGGGA...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTAAGACAGCATGGAGCATaGGGCGGACAGCAGAAACAG | + |
Preference number: 2 (lower is better) Translates to: DVWILPTSFRERRDKMSVRQHGA*GGQQKQ Trigger: CTGTTTCTGCTGTCCGCCTCATGCTCCATGCTGTCT...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGCCAAAGGCATTATGGTaGTCTCGAAATATTTTTGGT | + |
Preference number: 2 (lower is better) Translates to: SRGQFQSPERLFLRHQGGPKALW*SRNIFG Trigger: ACCAAAAATATTTCGAGATCACCATAATGCCTTTGG...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGAGGACTCTGCATCCTTTaGAACTCAACAGTGCAGTAT | + |
Preference number: 2 (lower is better) Translates to: MTGLVGPDPMVVNELGARGLCIL*NSTVQY Trigger: ATACTGCACTGTTGAGTTGCAAAGGATGCAGAGTCC...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | ACAATCTATCCACAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCGGACTCTGCATCCTTTaGAACTCAACAGTGCAGTAT | + |
Preference number: 2 (lower is better) Translates to: TIYPQAGQEACDSDILGSGLCIL*NSTVQY Trigger: ATACTGCACTGTTGAGTTGCAAAGGATGCAGAGTCC...GCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTGTGGATAGATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GGTCTGCAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTCCAGCCACAGGACTCTaGATCCTTTGCAACTCAACA | + |
Preference number: 2 (lower is better) Translates to: GLQTDKGEKLRVAIPLRAPATGL*ILCNST Trigger: TGTTGAGTTGCAAAGGATGCAGAGTCCTGTGGCTGG...AGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTGCAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATATGGCCACGGTGGGTGTaGTGGCTAGTTTTATGTCAA | + |
Preference number: 2 (lower is better) Translates to: VPGRLDHVPMDVPTPMSIWPRWV*WLVLCQ Trigger: TTGACATAAAACTAGCCAGCACACCCACCGTGGCCA...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTAACTGGTCCAGAATGTTaGTGGCCTCCAGGTAGCTGG | + |
Preference number: 2 (lower is better) Translates to: DVWILPTSFRERRDKMSVTGPEC*WPPGSW Trigger: CCAGCTACCTGGAGGCCAGCAACATTCTGGACCAGT...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | AGAAAGAGCTGCAGGAAAGAGATGGTGGCTGTGCAGGAGAGGCCTCTAACAGAGTTCCCCAAGGAATTGTaGGTTGCAGATCTGAGGAAT | + |
Preference number: 2 (lower is better) Translates to: RKSCRKEMVAVQERPLTEFPKEL*VADLRN Trigger: ATTCCTCAGATCTGCAACCCACAATTCCTTGGGGAA...CTCTGTTAGAGGCCTCTCCTGCACAGCCACCATCTCTTTCCTGCAGCTCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTTGCAGGGCAATGCTTTaGAATATTCTCTTGGTAAGA | + |
Preference number: 2 (lower is better) Translates to: ERLFLRHQGGAERRVCGSCRAML*NILLVR Trigger: TCTTACCAAGAGAATATTCCAAAGCATTGCCCTGCA...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTATCTTCCCTGGGAAGTaGAGGGTTAACCTTTCTTGC | + |
Preference number: 2 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFIFPGK*RVNLSC Trigger: GCAAGAAAGGTTAACCCTCCACTTCCCAGGGAAGAT...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGCTCAGTTTAAAAGTGTaGTTCCTGGCAGGCTTGACC | + |
Preference number: 2 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRLSLKV*FLAGLT Trigger: GGTCAAGCCTGCCAGGAACCACACTTTTAAACTGAG...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTAAAGGCACGGCTTTTCTaGGAGGCTTTGGCAGCTGTG | + |
Preference number: 2 (lower is better) Translates to: DVWILPTSFRERRDKMSVKARLF*EALAAV Trigger: CACAGCTGCCAAAGCCTCCCAGAAAAGCCGTGCCTT...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACATGCTGTACAGGACAGTaGTGGTGGGGTTCCCCATTG | + |
Preference number: 2 (lower is better) Translates to: DQMKCLRHKPILYTLHETCCTGQ*WWGSPL Trigger: CAATGGGGAACCCCACCACCACTGTCCTGTACAGCA...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTATGCTGTACAGGACAGTaGTGGTGGGGTTCCCCATTG | + |
Preference number: 2 (lower is better) Translates to: DVWILPTSFRERRDKMSVCCTGQ*WWGSPL Trigger: CAATGGGGAACCCCACCACCACTGTCCTGTACAGCA...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGATGTCTTCCTCCTTTGTaGCACCTGTTTCAAGAGTTT | + |
Preference number: 2 (lower is better) Translates to: MTGLVGPDPMVVNELGARCLPPL*HLFQEF Trigger: AAACTCTTGAAACAGGTGTCACAAAGGAGGAAGACA...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTGAGCAACTAGCAAATTaGCAAGAAACAGGAGCTCAG | + |
Preference number: 2 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFEQLAN*QETGAQ Trigger: CTGAGCTCCTGTTTCTTGTCAATTTGCTAGTTGCTC...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | AGAAAGAGCTGCAGGAAAGAGATGGTGGCTGTGCAGGAGAGGCCTCTAACAGAGAATGCAGAGAGGCAATaGGCAACTAGCAAATTGACA | + |
Preference number: 2 (lower is better) Translates to: RKSCRKEMVAVQERPLTENAERQ*ATSKLT Trigger: TGTCAATTTGCTAGTTGCTCATTGCCTCTCTGCATT...CTCTGTTAGAGGCCTCTCCTGCACAGCCACCATCTCTTTCCTGCAGCTCTTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGAAATGCAGAGAGGCAATaGGCAACTAGCAAATTGACA | + |
Preference number: 2 (lower is better) Translates to: MTGLVGPDPMVVNELGARNAERQ*ATSKLT Trigger: TGTCAATTTGCTAGTTGCTCATTGCCTCTCTGCATT...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGACTCTTGGTAAGAGAATaGGGGAATCTGCTTGAAAAG | + |
Preference number: 2 (lower is better) Translates to: MTGLVGPDPMVVNELGARLLVRE*GNLLEK Trigger: CTTTTCAAGCAGATTCCCTCATTCTCTTACCAAGAG...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACAGGTTCCTGGCAGGCTTaGCCATGTTCCAATGGATGT | + |
Preference number: 2 (lower is better) Translates to: DQMKCLRHKPILYTLHETGSWQA*PCSNGC Trigger: ACATCCATTGGAACATGGTCAAGCCTGCCAGGAACC...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGTCCCAGGACATGTTCTaGAGAAGTTTTGGGTGGATT | + |
Preference number: 2 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRSQDMF*RSFGWI Trigger: AATCCACCCAAAACTTCTTCAGAACATGTCCTGGGA...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTGATCTAAAAGTCCTCTaGAGAATTTTAACACCAAGG | + |
Preference number: 2 (lower is better) Translates to: ERLFLRHQGGAERRVCGSDLKVL*RILTPR Trigger: CCTTGGTGTTAAAATTCTTCAGAGGACTTTTAGATC...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGACTGATTCAGGTTGTTTaGAACCAAGTCATCAGCTTC | + |
Preference number: 2 (lower is better) Translates to: MTGLVGPDPMVVNELGARLIQVV*NQVISF Trigger: GAAGCTGATGACTTGGTTTCAAACAACCTGAATCAG...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGGATGAGCCTTCTGCTTaGTCGGTTGATGACAAGTTT | + |
Preference number: 2 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRDEPSA*SVDDKF Trigger: AAACTTGTCATCAACCGAGCAAGCAGAAGGCTCATC...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GGTCTGCAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTATCTTCCCTGGGAAGTaGAGGGTTAACCTTTCTTGC | + |
Preference number: 2 (lower is better) Translates to: GLQTDKGEKLRVAIPLRAIFPGK*RVNLSC Trigger: GCAAGAAAGGTTAACCCTCCACTTCCCAGGGAAGAT...AGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTGCAGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTAAAAGAATGAGAAGTTaGGAGGGGTGGAGATATGGG | + |
Preference number: 2 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFKRMRS*EGWRYG Trigger: CCCATATCTCCACCCCTCCCAACTTCTCATTCTTTT...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGACACCTATGAGTATATaGGCAGCACAAATTGGCCAC | + |
Preference number: 2 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRTPMSI*AAQIGH Trigger: GTGGCCAATTTGTGCTGCCCATATACTCATAGGTGT...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGAACCCAGGCTTTCACTTaGGAAATAAAAGCAACTCTG | + |
Preference number: 2 (lower is better) Translates to: MTGLVGPDPMVVNELGARTQAFT*EIKATL Trigger: CAGAGTTGCTTTTATTTCCCAAGTGAAAGCCTGGGT...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | AGAAAGAGCTGCAGGAAAGAGATGGTGGCTGTGCAGGAGAGGCCTCTAACAGAGACCCAGGCTTTCACTTaGGAAATAAAAGCAACTCTG | + |
Preference number: 2 (lower is better) Translates to: RKSCRKEMVAVQERPLTETQAFT*EIKATL Trigger: CAGAGTTGCTTTTATTTCCCAAGTGAAAGCCTGGGT...CTCTGTTAGAGGCCTCTCCTGCACAGCCACCATCTCTTTCCTGCAGCTCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGCCAGGGATTAGAGACTaGGATGAGAGGTTAGAACAT | + |
Preference number: 2 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRPGIRD*DERLEH Trigger: ATGTTCTAACCTCTCATCCCAGTCTCTAATCCCTGG...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTCCAGGGATTAGAGACTaGGATGAGAGGTTAGAACAT | + |
Preference number: 2 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFPGIRD*DERLEH Trigger: ATGTTCTAACCTCTCATCCCAGTCTCTAATCCCTGG...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTTATTCTACCCTTCCATaGGACGCCAGAGCATATACA | + |
Preference number: 2 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFYSTLP*DARAYT Trigger: TGTATATGCTCTGGCGTCCCATGGAAGGGTAGAATA...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR CAA 90 bp | TGTGTGGACAGGACATTGCTGCTGGGATGTATGGTAAATAGAAATTaGACTCAGAGCCTGCGGCTGGAGAACTGTCCTCTGAGGAAACAA | + |
Preference number: 2 (lower is better) Translates to: CVDRTLLLGCMVNRN*TQSLRLENCPLRKQ Trigger: TTGTTTCCTCAGAGGACAGTTCTCCAGCCGCAGGCTCTGAGTCAAATTTCTATTTACCATACATCCCAGCAGCAATGTCCTGTCCACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR CAA 90 bp | AAGCTGACACACACTTTAAAGAGTTGGCTGAGGGCTAGAATGTCCTaGAAAATGCCGAGTTGCAAATGGTGTGCTCTTCGCAAGTCCCTC | + |
Preference number: 2 (lower is better) Translates to: KLTHTLKSWLRARMS*KMPSCKWCALRKSL Trigger: GAGGGACTTGCGAAGAGCACACCATTTGCAACTCGGCATTTTCAAGGACATTCTAGCCCTCAGCCAACTCTTTAAAGTGTGTGTCAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR TCA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAACTGTCCCAGTCACTGTaGGACAGCTCTGGGGAGGGA | + |
Preference number: 2 (lower is better) Translates to: ETKSSASYRAGFKNGLLKLSQSL*DSSGEG Trigger: TCCCTCCCCAGAGCTGTCTCACAGTGACTGGGACAG...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | AGAAAGAGCTGCAGGAAAGAGATGGTGGCTGTGCAGGAGAGGCCTCTAACAGAGATCAATATGCTAATGTaGCCAGTAAGAGAAAGGGCA | + |
Preference number: 2 (lower is better) Translates to: RKSCRKEMVAVQERPLTEINMLM*PVRERA Trigger: TGCCCTTTCTCTTACTGGTCACATTAGCATATTGAT...CTCTGTTAGAGGCCTCTCCTGCACAGCCACCATCTCTTTCCTGCAGCTCTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR TCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACAAAGGCTTTTCAGAAATaGCACGTGCAGGGCTTAGCC | + |
Preference number: 2 (lower is better) Translates to: DQMKCLRHKPILYTLHETKAFQK*HVQGLA Trigger: GGCTAAGCCCTGCACGTGTCATTTCTGAAAAGCCTT...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR TCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTACAAACGAGACAGCAATaGCTAGAGAGAGGCACGAGA | + |
Preference number: 2 (lower is better) Translates to: DVWILPTSFRERRDKMSVQTRQQ*LERGTR Trigger: TCTCGTGCCTCTCTCTAGTCATTGCTGTCTCGTTTG...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR GCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTCAAGGAATTGTGGGTTaGAGATCTGAGGAATACACA | + |
Preference number: 2 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFQGIVG*RSEEYT Trigger: TGTGTATTCCTCAGATCTGCAACCCACAATTCCTTG...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR GCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTACCAGCCACAGGACTCTaGATCCTTTGCAACTCAACA | + |
Preference number: 2 (lower is better) Translates to: DVWILPTSFRERRDKMSVPATGL*ILCNST Trigger: TGTTGAGTTGCAAAGGATGCAGAGTCCTGTGGCTGG...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGAGGGTTAACCTTTCTTaGTTCCCCAGTGAAAAAGCA | + |
Preference number: 2 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRRVNLS*FPSEKA Trigger: TGCTTTTTCACTGGGGAAGCAAGAAAGGTTAACCCT...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR GCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTAGAAACAAAAGGCGCTTaGTTCAGCCTCGCCATCATC | + |
Preference number: 2 (lower is better) Translates to: DVWILPTSFRERRDKMSVETKGA*FSLAII Trigger: GATGATGGCGAGGCTGAAGCAAGCGCCTTTTGTTTC...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACAGAAACAAAAGGCGCTTaGTTCAGCCTCGCCATCATC | + |
Preference number: 2 (lower is better) Translates to: DQMKCLRHKPILYTLHETETKGA*FSLAII Trigger: GATGATGGCGAGGCTGAAGCAAGCGCCTTTTGTTTC...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACAGGCCACGGGACCCAATaGAGATTCACAGAGAAAACA | + |
Preference number: 2 (lower is better) Translates to: DQMKCLRHKPILYTLHETGHGTQ*RFTEKT Trigger: TGTTTTCTCTGTGAATCTGCATTGGGTCCCGTGGCC...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GGTCTGCAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTTTCCCCAAGGAATTGTaGGTTGCAGATCTGAGGAAT | + |
Preference number: 2 (lower is better) Translates to: GLQTDKGEKLRVAIPLRAFPKEL*VADLRN Trigger: ATTCCTCAGATCTGCAACCCACAATTCCTTGGGGAA...AGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTGCAGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTTCATTCATATCTTCCTaGTCTCAAGACACAGGGGTT | + |
Preference number: 2 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFSFISS*SQDTGV Trigger: AACCCCTGTGTCTTGAGACCAGGAAGATATGAATGA...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAAGGAAGAAGAGGACAGTaGGGCAGCCGACACACCACC | + |
Preference number: 2 (lower is better) Translates to: ETKSSASYRAGFKNGLLKGRRGQ*GSRHTT Trigger: GGTGGTGTGTCGGCTGCCCCACTGTCCTCTTCTTCC...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | AGAAAGAGCTGCAGGAAAGAGATGGTGGCTGTGCAGGAGAGGCCTCTAACAGAGGTGGAGATATGGGTGTaGTGTAAAAATAAGAAGGTG | + |
Preference number: 2 (lower is better) Translates to: RKSCRKEMVAVQERPLTEVEIWV*CKNKKV Trigger: CACCTTCTTATTTTTACACCACACCCATATCTCCAC...CTCTGTTAGAGGCCTCTCCTGCACAGCCACCATCTCTTTCCTGCAGCTCTTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTAAGAAGTTGGGAGGGGTaGAGATATGGGTGTGGTGTA | + |
Preference number: 2 (lower is better) Translates to: DVWILPTSFRERRDKMSVRSWEG*RYGCGV Trigger: TACACCACACCCATATCTCCACCCCTCCCAACTTCT...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACAAGAAGTTGGGAGGGGTaGAGATATGGGTGTGGTGTA | + |
Preference number: 2 (lower is better) Translates to: DQMKCLRHKPILYTLHETRSWEG*RYGCGV Trigger: TACACCACACCCATATCTCCACCCCTCCCAACTTCT...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | AGAAAGAGCTGCAGGAAAGAGATGGTGGCTGTGCAGGAGAGGCCTCTAACAGAGAGTAGCACTCCTTCATaGTCTCTGTATCAACTTGTA | + |
Preference number: 2 (lower is better) Translates to: RKSCRKEMVAVQERPLTESSTPS*SLYQLV Trigger: TACAAGTTGATACAGAGACCATGAAGGAGTGCTACT...CTCTGTTAGAGGCCTCTCCTGCACAGCCACCATCTCTTTCCTGCAGCTCTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTACCCAGGCTTTCACTTaGGAAATAAAAGCAACTCTG | + |
Preference number: 2 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFTQAFT*EIKATL Trigger: CAGAGTTGCTTTTATTTCCCAAGTGAAAGCCTGGGT...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | AGAAAGAGCTGCAGGAAAGAGATGGTGGCTGTGCAGGAGAGGCCTCTAACAGAGATAGACGAGATTTCATaGATCGGAGAAAAACTGGCT | + |
Preference number: 2 (lower is better) Translates to: RKSCRKEMVAVQERPLTEIDEIS*IGEKLA Trigger: AGCCAGTTTTTCTCCGATCCATGAAATCTCGTCTAT...CTCTGTTAGAGGCCTCTCCTGCACAGCCACCATCTCTTTCCTGCAGCTCTTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTAGAGACAGACCCTATCTaGAAAAGGATGAGGAGGAGG | + |
Preference number: 2 (lower is better) Translates to: DVWILPTSFRERRDKMSVETDPI*KRMRRR Trigger: CCTCCTCCTCATCCTTTTCCAGATAGGGTCTGTCTC...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACACCAAGGGTTTTCTTTTaGCTGGTGTGTGGACAGGAC | + |
Preference number: 2 (lower is better) Translates to: DQMKCLRHKPILYTLHETPRVFF*LVCGQD Trigger: GTCCTGTCCACACACCAGCCAAAAGAAAACCCTTGG...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTAAGGCTGAGAAAAGGCTaGCGGCTACAAGGTAGTACT | + |
Preference number: 2 (lower is better) Translates to: DVWILPTSFRERRDKMSVRLRKG*RLQGST Trigger: AGTACTACCTTGTAGCCGCCAGCCTTTTCTCAGCCT...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACAAGGCTGAGAAAAGGCTaGCGGCTACAAGGTAGTACT | + |
Preference number: 2 (lower is better) Translates to: DQMKCLRHKPILYTLHETRLRKG*RLQGST Trigger: AGTACTACCTTGTAGCCGCCAGCCTTTTCTCAGCCT...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GGTCTGCAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTTGTCTTCCTCCTTTGTaGCACCTGTTTCAAGAGTTT | + |
Preference number: 2 (lower is better) Translates to: GLQTDKGEKLRVAIPLRACLPPL*HLFQEF Trigger: AAACTCTTGAAACAGGTGTCACAAAGGAGGAAGACA...AGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTGCAGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATAAATGCAGAGAGGCAATaGGCAACTAGCAAATTGACA | + |
Preference number: 2 (lower is better) Translates to: VPGRLDHVPMDVPTPMSINAERQ*ATSKLT Trigger: TGTCAATTTGCTAGTTGCTCATTGCCTCTCTGCATT...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATACTCTTGGTAAGAGAATaGGGGAATCTGCTTGAAAAG | + |
Preference number: 2 (lower is better) Translates to: VPGRLDHVPMDVPTPMSILLVRE*GNLLEK Trigger: CTTTTCAAGCAGATTCCCTCATTCTCTTACCAAGAG...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GGTCTGCAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTCTCTTGGTAAGAGAATaGGGGAATCTGCTTGAAAAG | + |
Preference number: 2 (lower is better) Translates to: GLQTDKGEKLRVAIPLRALLVRE*GNLLEK Trigger: CTTTTCAAGCAGATTCCCTCATTCTCTTACCAAGAG...AGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTGCAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTATCAATATGCTAATGTaGCCAGTAAGAGAAAGGGCA | + |
Preference number: 2 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFINMLM*PVRERA Trigger: TGCCCTTTCTCTTACTGGTCACATTAGCATATTGAT...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGAGAGAGAACACACATTTaGCTAAGTTCTTCAAGTTGT | + |
Preference number: 2 (lower is better) Translates to: MTGLVGPDPMVVNELGARERTHI*LSSSSC Trigger: ACAACTTGAAGAACTTAGTCAAATGTGTGTTCTCTC...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | CAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTGGCTTAGATGAGCCTTCTGCTTaGTCGGTTGATGACAAGTTT | + |
Preference number: 2 (lower is better) Translates to: QTDKGEKLRVAIPLRAGLDEPSA*SVDDKF Trigger: AAACTTGTCATCAACCGAGCAAGCAGAAGGCTCATC...TAAGCCAGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GGTCTGCAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTAACTCTGCAGGGCAATaGTTTGGAATATTCTCTTGG | + |
Preference number: 2 (lower is better) Translates to: GLQTDKGEKLRVAIPLRANSAGQ*FGIFSW Trigger: CCAAGAGAATATTCCAAAGCATTGCCCTGCAGAGTT...AGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTGCAGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GGTCTGCAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTTTGTGTGTGTGTGTGTaGACATTTGTATGTGCTCAC | + |
Preference number: 2 (lower is better) Translates to: GLQTDKGEKLRVAIPLRALCVCV*TFVCAH Trigger: GTGAGCACATACAAATGTGCACACACACACACACAA...AGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTGCAGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGATAAGGGAGGCACATTaGAAATGGAAACATCTTGCA | + |
Preference number: 2 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRIREAH*KWKHLA Trigger: TGCAAGATGTTTCCATTTGCAATGTGCCTCCCTTAT...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | AGAAAGAGCTGCAGGAAAGAGATGGTGGCTGTGCAGGAGAGGCCTCTAACAGAGTTTAAATACCTGGTCTaGAGACAGATAAAGGTGAGA | + |
Preference number: 2 (lower is better) Translates to: RKSCRKEMVAVQERPLTEFKYLV*RQIKVR Trigger: TCTCACCTTTATCTGTCTGCAGACCAGGTATTTAAA...CTCTGTTAGAGGCCTCTCCTGCACAGCCACCATCTCTTTCCTGCAGCTCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGACCACTAACTCTAACCTaGACTGAGAAATTATCCTTT | + |
Preference number: 2 (lower is better) Translates to: MTGLVGPDPMVVNELGARPLTLT*TEKLSF Trigger: AAAGGATAATTTCTCAGTGCAGGTTAGAGTTAGTGG...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTACGTGAACGAATTGGGTaGAAGACACACACACAAAGG | + |
Preference number: 2 (lower is better) Translates to: DVWILPTSFRERRDKMSVRERIG*KTHTQR Trigger: CCTTTGTGTGTGTGTCTTGCACCCAATTCGTTCACG...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACATGGATGTGTGGATTCTaGCCACCTCTTTCAGAGAGA | + |
Preference number: 2 (lower is better) Translates to: DQMKCLRHKPILYTLHETWMCGF*PPLSER Trigger: TCTCTCTGAAAGAGGTGGGCAGAATCCACACATCCA...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTTGCAGGGCAATGCTTTaGAATATTCTCTTGGTAAGA | + |
Preference number: 2 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFCRAML*NILLVR Trigger: TCTTACCAAGAGAATATTCCAAAGCATTGCCCTGCA...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACACATTCCTTTGAGGGCTaGCTTAGAAACAGGGAACCT | + |
Preference number: 2 (lower is better) Translates to: DQMKCLRHKPILYTLHETHSFEG*LRNREP Trigger: AGGTTCCCTGTTTCTAAGCCAGCCCTCAAAGGAATG...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTACATTCCTTTGAGGGCTaGCTTAGAAACAGGGAACCT | + |
Preference number: 2 (lower is better) Translates to: DVWILPTSFRERRDKMSVHSFEG*LRNREP Trigger: AGGTTCCCTGTTTCTAAGCCAGCCCTCAAAGGAATG...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CCA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGGTGGAGATATGGGTGTaGTGTAAAAATAAGAAGGTG | + |
Preference number: 2 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRVEIWV*CKNKKV Trigger: CACCTTCTTATTTTTACACCACACCCATATCTCCAC...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CCA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGAGTAGCACTCCTTCATaGTCTCTGTATCAACTTGTA | + |
Preference number: 2 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRSSTPS*SLYQLV Trigger: TACAAGTTGATACAGAGACCATGAAGGAGTGCTACT...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTACTCAGTTTAAAAGTGTaGTTCCTGGCAGGCTTGACC | + |
Preference number: 2 (lower is better) Translates to: DVWILPTSFRERRDKMSVLSLKV*FLAGLT Trigger: GGTCAAGCCTGCCAGGAACCACACTTTTAAACTGAG...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACACTCAGTTTAAAAGTGTaGTTCCTGGCAGGCTTGACC | + |
Preference number: 2 (lower is better) Translates to: DQMKCLRHKPILYTLHETLSLKV*FLAGLT Trigger: GGTCAAGCCTGCCAGGAACCACACTTTTAAACTGAG...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CCA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGATAGACGAGATTTCATaGATCGGAGAAAAACTGGCT | + |
Preference number: 2 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRIDEIS*IGEKLA Trigger: AGCCAGTTTTTCTCCGATCCATGAAATCTCGTCTAT...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CCA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAAGCAGGAAAGAGATGGTaGCTGTGCAGGAGAGGCCTC | + |
Preference number: 2 (lower is better) Translates to: ETKSSASYRAGFKNGLLKAGKRW*LCRRGL Trigger: GAGGCCTCTCCTGCACAGCCACCATCTCTTTCCTGC...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | CAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTGGCTTACTCTTGGTAAGAGAATaGGGGAATCTGCTTGAAAAG | + |
Preference number: 2 (lower is better) Translates to: QTDKGEKLRVAIPLRAGLLLVRE*GNLLEK Trigger: CTTTTCAAGCAGATTCCCTCATTCTCTTACCAAGAG...TAAGCCAGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR TCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTAAAGGGAACCTCAATTaGGAAAACATCTCCATAAGA | + |
Preference number: 2 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFKGNLN*ENISIR Trigger: TCTTATGGAGATGTTTTCTCAATTGAGGTTCCCTTT...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR TCA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGAAAGGGAACCTCAATTaGGAAAACATCTCCATAAGA | + |
Preference number: 2 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRKGNLN*ENISIR Trigger: TCTTATGGAGATGTTTTCTCAATTGAGGTTCCCTTT...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACATGCTTTTATCTAAAATaGTGTAGTGTGGGCCACGGG | + |
Preference number: 2 (lower is better) Translates to: DQMKCLRHKPILYTLHETCFYLK*CSVGHG Trigger: CCCGTGGCCCACACTACATCATTTTAGATAAAAGCA...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACAGGACTCTGCATCCTTTaGAACTCAACAGTGCAGTAT | + |
Preference number: 2 (lower is better) Translates to: DQMKCLRHKPILYTLHETGLCIL*NSTVQY Trigger: ATACTGCACTGTTGAGTTGCAAAGGATGCAGAGTCC...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTAGATGAGCCTTCTGCTTaGTCGGTTGATGACAAGTTT | + |
Preference number: 2 (lower is better) Translates to: DVWILPTSFRERRDKMSVDEPSA*SVDDKF Trigger: AAACTTGTCATCAACCGAGCAAGCAGAAGGCTCATC...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | CAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTGGCTTAAGGGTTAACCTTTCTTaGTTCCCCAGTGAAAAAGCA | + |
Preference number: 2 (lower is better) Translates to: QTDKGEKLRVAIPLRAGLRVNLS*FPSEKA Trigger: TGCTTTTTCACTGGGGAAGCAAGAAAGGTTAACCCT...TAAGCCAGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTCAAATGGAAACATCTTaGACATTCTTCTCTGGTCTT | + |
Preference number: 2 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFQMETS*TFFSGL Trigger: AAGACCAGAGAAGAATGTGCAAGATGTTTCCATTTG...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGCAAATGGAAACATCTTaGACATTCTTCTCTGGTCTT | + |
Preference number: 2 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRQMETS*TFFSGL Trigger: AAGACCAGAGAAGAATGTGCAAGATGTTTCCATTTG...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATAATAAGGGAGGCACATTaGAAATGGAAACATCTTGCA | + |
Preference number: 2 (lower is better) Translates to: VPGRLDHVPMDVPTPMSIIREAH*KWKHLA Trigger: TGCAAGATGTTTCCATTTGCAATGTGCCTCCCTTAT...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATAGTGGAGATATGGGTGTaGTGTAAAAATAAGAAGGTG | + |
Preference number: 2 (lower is better) Translates to: VPGRLDHVPMDVPTPMSIVEIWV*CKNKKV Trigger: CACCTTCTTATTTTTACACCACACCCATATCTCCAC...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATAAGTAGCACTCCTTCATaGTCTCTGTATCAACTTGTA | + |
Preference number: 2 (lower is better) Translates to: VPGRLDHVPMDVPTPMSISSTPS*SLYQLV Trigger: TACAAGTTGATACAGAGACCATGAAGGAGTGCTACT...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTACCAGGGATTAGAGACTaGGATGAGAGGTTAGAACAT | + |
Preference number: 2 (lower is better) Translates to: DVWILPTSFRERRDKMSVPGIRD*DERLEH Trigger: ATGTTCTAACCTCTCATCCCAGTCTCTAATCCCTGG...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACACACACTTTAAAGAGTTaGCTGAGGGCTAGAATGTCC | + |
Preference number: 2 (lower is better) Translates to: DQMKCLRHKPILYTLHETHTLKS*LRARMS Trigger: GGACATTCTAGCCCTCAGCCAACTCTTTAAAGTGTG...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACAAATGCAGAGAGGCAATaGGCAACTAGCAAATTGACA | + |
Preference number: 2 (lower is better) Translates to: DQMKCLRHKPILYTLHETNAERQ*ATSKLT Trigger: TGTCAATTTGCTAGTTGCTCATTGCCTCTCTGCATT...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAAATAAGCAGTCAGAGCTaGTGCTGGGGCAAAGAGGTG | + |
Preference number: 2 (lower is better) Translates to: ETKSSASYRAGFKNGLLKISSQS*CWGKEV Trigger: CACCTCTTTGCCCCAGCATCAGCTCTGACTGCTTAT...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GAACCAGTGCCCCATTGGCTTTACATAAGGGAGGCACATTGCAAATGGAAACATCAAGGAATTGTGGGTTaGAGATCTGAGGAATACACA | + |
Preference number: 2 (lower is better) Translates to: EPVPHWLYIREAHCKWKHQGIVG*RSEEYT Trigger: TGTGTATTCCTCAGATCTGCAACCCACAATTCCTTG...ATGTTTCCATTTGCAATGTGCCTCCCTTATGTAAAGCCAATGGGGCACTGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTAAACTCTGCAGGGCAATaGTTTGGAATATTCTCTTGG | + |
Preference number: 2 (lower is better) Translates to: DVWILPTSFRERRDKMSVNSAGQ*FGIFSW Trigger: CCAAGAGAATATTCCAAAGCATTGCCCTGCAGAGTT...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GGTCTGCAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTCAAATGGAAACATCTTaGACATTCTTCTCTGGTCTT | + |
Preference number: 2 (lower is better) Translates to: GLQTDKGEKLRVAIPLRAQMETS*TFFSGL Trigger: AAGACCAGAGAAGAATGTGCAAGATGTTTCCATTTG...AGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTGCAGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTAAGTCAAATCAGAAATaGTCTTTAAAGAGGAGTCAG | + |
Preference number: 2 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFKSNQK*SLKRSQ Trigger: CTGACTCCTCTTTAAAGAGCATTTCTGATTTGACTT...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTAAGGAGAGAAAACTACTaGAAACGAGACAGCAATGAC | + |
Preference number: 2 (lower is better) Translates to: DVWILPTSFRERRDKMSVRRENY*KRDSND Trigger: GTCATTGCTGTCTCGTTTGCAGTAGTTTTCTCTCCT...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | CAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTGGCTTATGCAGGGCAATGCTTTaGAATATTCTCTTGGTAAGA | + |
Preference number: 2 (lower is better) Translates to: QTDKGEKLRVAIPLRAGLCRAML*NILLVR Trigger: TCTTACCAAGAGAATATTCCAAAGCATTGCCCTGCA...TAAGCCAGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAAAAGGCTTTTCAGAAATaGCACGTGCAGGGCTTAGCC | + |
Preference number: 2 (lower is better) Translates to: ETKSSASYRAGFKNGLLKKAFQK*HVQGLA Trigger: GGCTAAGCCCTGCACGTGTCATTTCTGAAAAGCCTT...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GGTCTGCAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTTTTGCAACTCAACAGTaGAGTATTCATGCCAATTTT | + |
Preference number: 2 (lower is better) Translates to: GLQTDKGEKLRVAIPLRAFATQQ*SIHANF Trigger: AAAATTGGCATGAATACTGCACTGTTGAGTTGCAAA...AGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTGCAGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAACCAGCCACAGGACTCTaGATCCTTTGCAACTCAACA | + |
Preference number: 2 (lower is better) Translates to: ETKSSASYRAGFKNGLLKPATGL*ILCNST Trigger: TGTTGAGTTGCAAAGGATGCAGAGTCCTGTGGCTGG...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAACACAGATGCTTCCTATaGACGCTGGGTTACCAGCAA | + |
Preference number: 2 (lower is better) Translates to: ETKSSASYRAGFKNGLLKHRCFL*TLGYQQ Trigger: TTGCTGGTAACCCAGCGTGCATAGGAAGCATCTGTG...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GAACCAGTGCCCCATTGGCTTTACATAAGGGAGGCACATTGCAAATGGAAACATTGCAGGGCAATGCTTTaGAATATTCTCTTGGTAAGA | + |
Preference number: 2 (lower is better) Translates to: EPVPHWLYIREAHCKWKHCRAML*NILLVR Trigger: TCTTACCAAGAGAATATTCCAAAGCATTGCCCTGCA...ATGTTTCCATTTGCAATGTGCCTCCCTTATGTAAAGCCAATGGGGCACTGGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CCA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAAGAGACAGACCCTATCTaGAAAAGGATGAGGAGGAGG | + |
Preference number: 2 (lower is better) Translates to: ETKSSASYRAGFKNGLLKETDPI*KRMRRR Trigger: CCTCCTCCTCATCCTTTTCCAGATAGGGTCTGTCTC...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAACATCCCATTCTGAGATaGCAGATAGCCACAGGAGAT | + |
Preference number: 2 (lower is better) Translates to: ETKSSASYRAGFKNGLLKHPILR*QIATGD Trigger: ATCTCCTGTGGCTATCTGTCATCTCAGAATGGGATG...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR TCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACACTTTTGAAACACAAATaGGAAGGATTTTGGCTTGTC | + |
Preference number: 2 (lower is better) Translates to: DQMKCLRHKPILYTLHETLLKHK*EGFWLV Trigger: GACAAGCCAAAATCCTTCTCATTTGTGTTTCAAAAG...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR GCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTACCACTAACTCTAACCTaGACTGAGAAATTATCCTTT | + |
Preference number: 2 (lower is better) Translates to: DVWILPTSFRERRDKMSVPLTLT*TEKLSF Trigger: AAAGGATAATTTCTCAGTGCAGGTTAGAGTTAGTGG...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR GCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACAGTGAGGCCTACCCTTTaGAACACAGTAAATTTAAAA | + |
Preference number: 2 (lower is better) Translates to: DQMKCLRHKPILYTLHETVRPTL*NTVNLK Trigger: TTTTAAATTTACTGTGTTGCAAAGGGTAGGCCTCAC...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CCA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAACTCAGTTTAAAAGTGTaGTTCCTGGCAGGCTTGACC | + |
Preference number: 2 (lower is better) Translates to: ETKSSASYRAGFKNGLLKLSLKV*FLAGLT Trigger: GGTCAAGCCTGCCAGGAACCACACTTTTAAACTGAG...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR TCA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAATCCCAGGACATGTTCTaGAGAAGTTTTGGGTGGATT | + |
Preference number: 2 (lower is better) Translates to: ETKSSASYRAGFKNGLLKSQDMF*RSFGWI Trigger: AATCCACCCAAAACTTCTTCAGAACATGTCCTGGGA...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTATTATGTCTCTTTCATTaGAAAGATGGCCTTTACACT | + |
Preference number: 2 (lower is better) Translates to: DVWILPTSFRERRDKMSVLCLFH*KDGLYT Trigger: AGTGTAAAGGCCATCTTTCCAATGAAAGAGACATAA...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR GCA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAAAGGGTTAACCTTTCTTaGTTCCCCAGTGAAAAAGCA | + |
Preference number: 2 (lower is better) Translates to: ETKSSASYRAGFKNGLLKRVNLS*FPSEKA Trigger: TGCTTTTTCACTGGGGAAGCAAGAAAGGTTAACCCT...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR GCA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAATTGTGTGTGTGTGTGTaGACATTTGTATGTGCTCAC | + |
Preference number: 2 (lower is better) Translates to: ETKSSASYRAGFKNGLLKLCVCV*TFVCAH Trigger: GTGAGCACATACAAATGTGCACACACACACACACAA...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CCA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAAATAGACGAGATTTCATaGATCGGAGAAAAACTGGCT | + |
Preference number: 2 (lower is better) Translates to: ETKSSASYRAGFKNGLLKIDEIS*IGEKLA Trigger: AGCCAGTTTTTCTCCGATCCATGAAATCTCGTCTAT...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR GCA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAATTTAAATACCTGGTCTaGAGACAGATAAAGGTGAGA | + |
Preference number: 2 (lower is better) Translates to: ETKSSASYRAGFKNGLLKFKYLV*RQIKVR Trigger: TCTCACCTTTATCTGTCTGCAGACCAGGTATTTAAA...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR CCA 72 bp | TCCCCGCTGCCACACTGCTGTACAGGACAGTGGTGGTaGGGTTCCCCATTGGCAGGCAGACTCACAGCAGGC | + |
Preference number: 3 (lower is better) Translates to: SPLPHCCTGQWW*GSPLAGRLTAG Trigger: GCCTGCTGTGAGTCTGCCTGCCAATGGGGAACCCCACCACCACTGTCCTGTACAGCAGTGTGGCAGCGGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR GCA 72 bp | CAGAGCCATGGTGTCTGCCCACTGGCCGGGATTCGGTaGTTGCGCATAAGTTCCTTCCCAGGGATGCAGAGC | + |
Preference number: 3 (lower is better) Translates to: QSHGVCPLAGIR*LRISSFPGMQS Trigger: GCTCTGCATCCCTGGGAAGGAACTTATGCGCAAGCACCGAATCCCGGCCAGTGGGCAGACACCATGGCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR GCA 72 bp | CATGGACACAGTGGGGGAAGGCAGAGCCATGGTGTCTaGCCACTGGCCGGGATTCGGTGCTTGCGCATAAGT | + |
Preference number: 3 (lower is better) Translates to: HGHSGGRQSHGV*PLAGIRCLRIS Trigger: ACTTATGCGCAAGCACCGAATCCCGGCCAGTGGGCAGACACCATGGCTCTGCCTTCCCCCACTGTGTCCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGTGGTGGGGTTCCCCATaGGCAGGCAGACTCACAGCA | + |
Preference number: 3 (lower is better) Translates to: SRGQFQSPERLFLRHQGGWWGSP*AGRLTA Trigger: TGCTGTGAGTCTGCCTGCCAATGGGGAACCCCACCA...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR TCA 72 bp | GAAGAAGAGGACAGTGGGGCAGCCGACACACCACCCTaGCTCTGTGACATCTTTGCCAGCCCACTGCCAACC | + |
Preference number: 3 (lower is better) Translates to: EEEDSGAADTPP*LCDIFASPLPT Trigger: GGTTGGCAGTGGGCTGGCAAAGATGTCACAGAGTCAGGGTGGTGTGTCGGCTGCCCCACTGTCCTCTTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR GCA 72 bp | GCATACACAGACACAAGAGTTCGCAGGGCTCCCCGCTaGCACACTGCTGTACAGGACAGTGGTGGTGGGGTT | + |
Preference number: 3 (lower is better) Translates to: AYTDTRVRRAPR*HTAVQDSGGGV Trigger: AACCCCACCACCACTGTCCTGTACAGCAGTGTGGCAGCGGGGAGCCCTGCGAACTCTTGTGTCTGTGTATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CCA 72 bp | TCCTTCCCAGGGATGCAGAGCCGGGTGATGAGTTGGTaGACATGCCGGGAGAGGCGGCATACACAGACACAA | + |
Preference number: 3 (lower is better) Translates to: SFPGMQSRVMSW*TCRERRHTQTQ Trigger: TTGTGTCTGTGTATGCCGCCTCTCCCGGCATGTCCACCAACTCATCACCCGGCTCTGCATCCCTGGGAAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CCA 72 bp | AGTTCCTTCCCAGGGATGCAGAGCCGGGTGATGAGTTaGTGGACATGCCGGGAGAGGCGGCATACACAGACA | + |
Preference number: 3 (lower is better) Translates to: SSFPGMQSRVMS*WTCRERRHTQT Trigger: TGTCTGTGTATGCCGCCTCTCCCGGCATGTCCACCAACTCATCACCCGGCTCTGCATCCCTGGGAAGGAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGGACTCTGTGACATCTTaGCCAGCCCACTGCCAACCA | + |
Preference number: 3 (lower is better) Translates to: SRGQFQSPERLFLRHQGGDSVTS*PAHCQP Trigger: TGGTTGGCAGTGGGCTGGCAAAGATGTCACAGAGTC...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR TCA 72 bp | AGCAAGATGTCCAGGATAGATCTGTCCCAGTCACTGTaGGACAGCTCTGGGGAGGGAACGGTGAGGGCAGGG | + |
Preference number: 3 (lower is better) Translates to: SKMSRIDLSQSL*DSSGEGTVRAG Trigger: CCCTGCCCTCACCGTTCCCTCCCCAGAGCTGTCTCACAGTGACTGGGACAGATCTATCCTGGACATCTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR GCA 72 bp | AGCACAGGGTACGGCCAATTAACTGGTCCAGAATGTTaGTGGCCTCCAGGTAGCTGGACTCTGGGCATCCCA | + |
Preference number: 3 (lower is better) Translates to: STGYGQLTGPEC*WPPGSWTLGIP Trigger: TGGGATGCCCAGAGTCCAGCTACCTGGAGGCCAGCAACATTCTGGACCAGTTAATTGGCCGTACCCTGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CCA 72 bp | CACAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTaGGGAGCAGAGACACCAAGCCTGATGAGCCTTCTG | + |
Preference number: 3 (lower is better) Translates to: HRLARKLVTVTF*GAETPSLMSLL Trigger: CAGAAGGCTCATCAGGCTTGGTGTCTCTGCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | CAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCAGAGACACCAAGACCTTCCCCAAGGAATaGTGGGTTGCAGATCTGAGG | + |
Preference number: 3 (lower is better) Translates to: QAGQEACDSDILGSRDTKTFPKE*WVADLR Trigger: CCTCAGATCTGCAACCCACAATTCCTTGGGGAAGGT...CTTGGTGTCTCTGCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGAGGGTAGCCATTCCTTaGAGGGCTGGCTTAGAAACA | + |
Preference number: 3 (lower is better) Translates to: SRGQFQSPERLFLRHQGGRVAIP*RAGLET Trigger: TGTTTCTAAGCCAGCCCTCAAAGGAATGGCTACCCT...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR TCA 72 bp | ACGGGGCCAATTAGCAAGTGGGCACCCAGAACAGGCTaGGAAAAGGCTGGCGGCTACAAGGTAGTACTAAGG | + |
Preference number: 3 (lower is better) Translates to: TGPISKWAPRTG*EKAGGYKVVLR Trigger: CCTTAGTACTACCTTGTAGCCGCCAGCCTTTTCTCAGCCTGTTCTGGGTGCCCACTTGCTAATTGGCCCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTACCAAGGGTTTTCTTTaGGCTGGTGTGTGGACAGGA | + |
Preference number: 3 (lower is better) Translates to: ERLFLRHQGGAERRVCGSTKGFL*AGVWTG Trigger: TCCTGTCCACACACCAGCCAAAAGAAAACCCTTGGT...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR TCA 72 bp | GCCAAAGATGGAAGAGAAGCCCTCACCCTTGTCCTGTaGCTAAATAGCTGGGAGCCTGGACCAGACACCTCT | + |
Preference number: 3 (lower is better) Translates to: AKDGREALTLVL*LNSWEPGPDTS Trigger: AGAGGTGTCTGGTCCAGGCTCCCAGCTATTTAGTCACAGGACAAGGGTGAGGGCTTCTCTTCCATCTTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR GCA 72 bp | CAGACTCACAGCAGGCAGGGACCACACGTTGCTCGGTaGTCTCATGAATACAAGCCTGCGGTTGGTTATTCA | + |
Preference number: 3 (lower is better) Translates to: QTHSRQGPHVAR*SHEYKPAVGYS Trigger: TGAATAACCAACCGCAGGCTTGTATTCATGAGAGCACCGAGCAACGTGTGGTCCCTGCCTGCTGTGAGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CCA 72 bp | CACAGAGCTAGAGCCACAGATGCTTCCTATGCACGCTaGGTTACCAGCAACAATCTATCCACAGGCTGGCCA | + |
Preference number: 3 (lower is better) Translates to: HRARATDASYAR*VTSNNLSTGWP Trigger: TGGCCAGCCTGTGGATAGATTGTTGCTGGTAACCCAGCGTGCATAGGAAGCATCTGTGGCTCTAGCTCTGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CCA 72 bp | CATGTTCCAATGGATGTCCCCACACCTATGAGTATATaGGCAGCACAAATTGGCCACGGTGGGTGTGCTGGC | + |
Preference number: 3 (lower is better) Translates to: HVPMDVPTPMSI*AAQIGHGGCAG Trigger: GCCAGCACACCCACCGTGGCCAATTTGTGCTGCCCATATACTCATAGGTGTGGGGACATCCATTGGAACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | ACAATCTATCCACAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCACCTTCCCCAAGGAATaGTGGGTTGCAGATCTGAGG | + |
Preference number: 3 (lower is better) Translates to: TIYPQAGQEACDSDILGSTFPKE*WVADLR Trigger: CCTCAGATCTGCAACCCACAATTCCTTGGGGAAGGT...GCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTGTGGATAGATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTCTTCTGCTTGCTCGGTaGATGACAAGTTTCTTCCAG | + |
Preference number: 3 (lower is better) Translates to: ERLFLRHQGGAERRVCGSLLLAR*MTSFFQ Trigger: CTGGAAGAAACTTGTCATCAACCGAGCAAGCAGAAG...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | AGAAAGAGCTGCAGGAAAGAGATGGTGGCTGTGCAGGAGAGGCCTCTAACAGAGTCCTCTAGCTGGTACTaGGGAGGTAAATCCCCAGAG | + |
Preference number: 3 (lower is better) Translates to: RKSCRKEMVAVQERPLTESSSWY*GGKSPE Trigger: CTCTGGGGATTTACCTCCCAAGTACCAGCTAGAGGA...CTCTGTTAGAGGCCTCTCCTGCACAGCCACCATCTCTTTCCTGCAGCTCTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGAAAAAGAATGAGAAGTaGGGAGGGGTGGAGATATGG | + |
Preference number: 3 (lower is better) Translates to: SRGQFQSPERLFLRHQGGKKNEK*GGVEIW Trigger: CCATATCTCCACCCCTCCCAACTTCTCATTCTTTTT...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTCTTGAAAATGCCGAGTaGCAAATGGTGTGCTCTTCG | + |
Preference number: 3 (lower is better) Translates to: ERLFLRHQGGAERRVCGSLENAE*QMVCSS Trigger: CGAAGAGCACACCATTTGCAACTCGGCATTTTCAAG...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGAGGGCTAGAATGTCCTaGAAAATGCCGAGTTGCAAA | + |
Preference number: 3 (lower is better) Translates to: SRGQFQSPERLFLRHQGGRARMS*KMPSCK Trigger: TTTGCAACTCGGCATTTTCAAGGACATTCTAGCCCT...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR TCA 72 bp | GGCTTGACCATGTTCCAATGGATGTCCCCACACCTATaGGTATATGGGCAGCACAAATTGGCCACGGTGGGT | + |
Preference number: 3 (lower is better) Translates to: GLTMFQWMSPHL*VYGQHKLATVG Trigger: ACCCACCGTGGCCAATTTGTGCTGCCCATATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR TCA 72 bp | GGGAGCCTGGACCAGACACCTCTCATCCCTTCAAGATaGAGCGGGATAGACTGTGCTCTCTTTTCGTTTGAG | + |
Preference number: 3 (lower is better) Translates to: GSLDQTPLIPSR*SGIDCALFSFE Trigger: CTCAAACGAAAAGAGAGCACAGTCTATCCCGCTTCATCTTGAAGGGATGAGAGGTGTCTGGTCCAGGCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CCA 72 bp | CCCAGTGAAAAAGCACTTAGGGAAGTAACCCGAGGCTaGCCACATCAGACCAACTCTGCAGGGCAATGCTTT | + |
Preference number: 3 (lower is better) Translates to: PSEKALREVTRG*PHQTNSAGQCF Trigger: AAAGCATTGCCCTGCAGAGTTGGTCTGATGTGGCCAGCCTCGGGTTACTTCCCTAAGTGCTTTTTCACTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CCA 72 bp | TCGTCCCTAAAGATGGAAGAGATAGGACAGACAGCATaGAGCATGAGGCGGACAGCAGAAACAGTGTCGAGG | + |
Preference number: 3 (lower is better) Translates to: SSLKMEEIGQTA*SMRRTAETVSR Trigger: CCTCGACACTGTTTCTGCTGTCCGCCTCATGCTCCATGCTGTCTGTCCTATCTCTTCCATCTTTAGGGACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CCA 72 bp | AAGGAAAGATGGCTTCGACCCAGGCGAGGCCAAAGATaGAAGAGAAGCCCTCACCCTTGTCCTGTGACTAAA | + |
Preference number: 3 (lower is better) Translates to: KERWLRPRRGQR*KRSPHPCPVTK Trigger: TTTAGTCACAGGACAAGGGTGAGGGCTTCTCTTCCATCTTTGGCCTCGCCTGGGTCGAAGCCATCTTTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | ACCAAGCCTGATGAGCCTTCTGCTTGCTCGGTTGATGACAAGTTTCTTCCAGCCACCTTCCCCAAGGAATaGTGGGTTGCAGATCTGAGG | + |
Preference number: 3 (lower is better) Translates to: TKPDEPSACSVDDKFLPATFPKE*WVADLR Trigger: CCTCAGATCTGCAACCCACAATTCCTTGGGGAAGGT...GGCTGGAAGAAACTTGTCATCAACCGAGCAAGCAGAAGGCTCATCAGGCTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATAGACTCTGTGACATCTTaGCCAGCCCACTGCCAACCA | + |
Preference number: 3 (lower is better) Translates to: VPGRLDHVPMDVPTPMSIDSVTS*PAHCQP Trigger: TGGTTGGCAGTGGGCTGGCAAAGATGTCACAGAGTC...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTGCAAATGGAAACATCTaGCACATTCTTCTCTGGTCT | + |
Preference number: 3 (lower is better) Translates to: ERLFLRHQGGAERRVCGSANGNI*HILLWS Trigger: AGACCAGAGAAGAATGTGCAAGATGTTTCCATTTGC...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CAA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGTCTGATTCAGGTTGTTaGAAACCAAGTCATCAGCTT | + |
Preference number: 3 (lower is better) Translates to: SRGQFQSPERLFLRHQGGSDSGC*KPSHQL Trigger: AAGCTGATGACTTGGTTTCAAACAACCTGAATCAGA...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CAA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGACTTGAAAATGCCGAGTaGCAAATGGTGTGCTCTTCG | + |
Preference number: 3 (lower is better) Translates to: MTGLVGPDPMVVNELGARLENAE*QMVCSS Trigger: CGAAGAGCACACCATTTGCAACTCGGCATTTTCAAG...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR GCA 72 bp | CTCACGGTTCCCAGGCAGCCTGTCACACTGACACCCTaGGATGTGACTTCTCTAAGATTTAAGGCTTTTCAG | + |
Preference number: 3 (lower is better) Translates to: LTVPRQPVTLTP*DVTSLRFKAFQ Trigger: CTGAAAAGCCTTAAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAACCGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CAA 90 bp | AGAAAGAGCTGCAGGAAAGAGATGGTGGCTGTGCAGGAGAGGCCTCTAACAGAGCTGCAGGGCAATGCTTaGGAATATTCTCTTGGTAAG | + |
Preference number: 3 (lower is better) Translates to: RKSCRKEMVAVQERPLTELQGNA*EYSLGK Trigger: CTTACCAAGAGAATATTCCAAAGCATTGCCCTGCAG...CTCTGTTAGAGGCCTCTCCTGCACAGCCACCATCTCTTTCCTGCAGCTCTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CAA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATAAGGGTAGCCATTCCTTaGAGGGCTGGCTTAGAAACA | + |
Preference number: 3 (lower is better) Translates to: VPGRLDHVPMDVPTPMSIRVAIP*RAGLET Trigger: TGTTTCTAAGCCAGCCCTCAAAGGAATGGCTACCCT...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CAA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGAAGGGCTAGAATGTCCTaGAAAATGCCGAGTTGCAAA | + |
Preference number: 3 (lower is better) Translates to: MTGLVGPDPMVVNELGARRARMS*KMPSCK Trigger: TTTGCAACTCGGCATTTTCAAGGACATTCTAGCCCT...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR CCA 72 bp | AGGGCTAGAATGTCCTTGAAAATGCCGAGTTGCAAATaGTGTGCTCTTCGCAAGTCCCTCACAGCACATTCG | + |
Preference number: 3 (lower is better) Translates to: RARMSLKMPSCK*CALRKSLTAHS Trigger: CGAATGTGCTGTGAGGGACTTGCGAAGAGCACACCATTTGCAACTCGGCATTTTCAAGGACATTCTAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CAA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTCATAAGGGAGGCACATaGCAAATGGAAACATCTTGC | + |
Preference number: 3 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFHKGGT*QMETSC Trigger: GCAAGATGTTTCCATTTGCAATGTGCCTCCCTTATG...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACATCCTCTAGCTGGTACTaGGGAGGTAAATCCCCAGAG | + |
Preference number: 3 (lower is better) Translates to: DQMKCLRHKPILYTLHETSSSWY*GGKSPE Trigger: CTCTGGGGATTTACCTCCCAAGTACCAGCTAGAGGA...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CAA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTTTTATGTCTCTTTCATaGGAAAGATGGCCTTTACAC | + |
Preference number: 3 (lower is better) Translates to: ERLFLRHQGGAERRVCGSFMSLS*ERWPLH Trigger: GTGTAAAGGCCATCTTTCCAATGAAAGAGACATAAA...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CAA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTTGTTCTGAAGAAGTTTaGGGTGGATTTTTATGTCTC | + |
Preference number: 3 (lower is better) Translates to: ERLFLRHQGGAERRVCGSCSEEV*GGFLCL Trigger: GAGACATAAAAATCCACCCAAAACTTCTTCAGAACA...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR TCA 72 bp | AAGGCTGAACCTTACACAACTCAGGGCAACGAGCTGTaGGAATTGTGGAAGTGGCTAGGAATCCTCAATCCT | + |
Preference number: 3 (lower is better) Translates to: KAEPYTTQGNEL*ELWKWLGILNP Trigger: AGGATTGAGGATTCCTAGCCACTTCCACAATTCTCACAGCTCGTTGCCCTGAGTTGTGTAAGGTTCAGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | GGTCTGCAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTCTGCAGGGCAATGCTTaGGAATATTCTCTTGGTAAG | + |
Preference number: 3 (lower is better) Translates to: GLQTDKGEKLRVAIPLRALQGNA*EYSLGK Trigger: CTTACCAAGAGAATATTCCAAAGCATTGCCCTGCAG...AGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTGCAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | AGAAAGAGCTGCAGGAAAGAGATGGTGGCTGTGCAGGAGAGGCCTCTAACAGAGTTCCCCAACTTGCTTTaGGGCATTGTTAACATCATA | + |
Preference number: 3 (lower is better) Translates to: RKSCRKEMVAVQERPLTEFPNLL*GIVNII Trigger: TATGATGTTAACAATGCCCAAAAGCAAGTTGGGGAA...CTCTGTTAGAGGCCTCTCCTGCACAGCCACCATCTCTTTCCTGCAGCTCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGAACTTTATTCCCCAACTaGCTTTTGGGCATTGTTAAC | + |
Preference number: 3 (lower is better) Translates to: MTGLVGPDPMVVNELGARTLFPN*LLGIVN Trigger: GTTAACAATGCCCAAAAGCAAGTTGGGGAATAAAGT...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CAA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGATCTGATTCAGGTTGTTaGAAACCAAGTCATCAGCTT | + |
Preference number: 3 (lower is better) Translates to: MTGLVGPDPMVVNELGARSDSGC*KPSHQL Trigger: AAGCTGATGACTTGGTTTCAAACAACCTGAATCAGA...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CAA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTTTCCCCAACTTGCTTTaGGGCATTGTTAACATCATA | + |
Preference number: 3 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFFPNLL*GIVNII Trigger: TATGATGTTAACAATGCCCAAAAGCAAGTTGGGGAA...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CAA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGACTTTATTCCCCAACTaGCTTTTGGGCATTGTTAAC | + |
Preference number: 3 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRTLFPN*LLGIVN Trigger: GTTAACAATGCCCAAAAGCAAGTTGGGGAATAAAGT...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CAA 90 bp | AGAAAGAGCTGCAGGAAAGAGATGGTGGCTGTGCAGGAGAGGCCTCTAACAGAGTGTTCTGAAGAAGTTTaGGGTGGATTTTTATGTCTC | + |
Preference number: 3 (lower is better) Translates to: RKSCRKEMVAVQERPLTECSEEV*GGFLCL Trigger: GAGACATAAAAATCCACCCAAAACTTCTTCAGAACA...CTCTGTTAGAGGCCTCTCCTGCACAGCCACCATCTCTTTCCTGCAGCTCTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR TCA 72 bp | CTTGTAGTCTCAGGTTCCTGCCCTGACTGCCTTCAGTaGTGGGCTAGGATGTGGAAATATAAGTCCACTTTA | + |
Preference number: 3 (lower is better) Translates to: LVVSGSCPDCLQ*WARMWKYKSTL Trigger: TAAAGTGGACTTATATTTCCACATCCTAGCCCATCACTGAAGGCAGTCAGGGCAGGAACCTGAGACTACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR TCA 72 bp | GCTCAGGAGAGAAAACTACTGCAAACGAGACAGCAATaGCTAGAGAGAGGCACGAGAGAACACACATTTGAC | + |
Preference number: 3 (lower is better) Translates to: AQERKLLQTRQQ*LERGTREHTFD Trigger: GTCAAATGTGTGTTCTCTCGTGCCTCTCTCTAGTCATTGCTGTCTCGTTTGCAGTAGTTTTCTCTCCTGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR GCA 72 bp | CTTATCTTCCCTGGGAAGTGGAGGGTTAACCTTTCTTaGTTCCCCAGTGAAAAAGCACTTAGGGAAGTAACC | + |
Preference number: 3 (lower is better) Translates to: LIFPGKWRVNLS*FPSEKALREVT Trigger: GGTTACTTCCCTAAGTGCTTTTTCACTGGGGAAGCAAGAAAGGTTAACCCTCCACTTCCCAGGGAAGATAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR GCA 72 bp | CCAGTGCCCCATTGGCTTTACATAAGGGAGGCACATTaGAAATGGAAACATCTTGCACATTCTTCTCTGGTC | + |
Preference number: 3 (lower is better) Translates to: PVPHWLYIREAH*KWKHLAHSSLV Trigger: GACCAGAGAAGAATGTGCAAGATGTTTCCATTTGCAATGTGCCTCCCTTATGTAAAGCCAATGGGGCACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR GCA 72 bp | TTGAGTATGAGGCACCTTCTGGAACAGATCCAGATCTaGTTCGTCCCTAAAGATGGAAGAGATAGGACAGAC | + |
Preference number: 3 (lower is better) Translates to: LSMRHLLEQIQI*FVPKDGRDRTD Trigger: GTCTGTCCTATCTCTTCCATCTTTAGGGACGAAGCAGATCTGGATCTGTTCCAGAAGGTGCCTCATACTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTACTGCAGGGCAATGCTTaGGAATATTCTCTTGGTAAG | + |
Preference number: 3 (lower is better) Translates to: DVWILPTSFRERRDKMSVLQGNA*EYSLGK Trigger: CTTACCAAGAGAATATTCCAAAGCATTGCCCTGCAG...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTAAAAAAGAATGAGAAGTaGGGAGGGGTGGAGATATGG | + |
Preference number: 3 (lower is better) Translates to: DVWILPTSFRERRDKMSVKKNEK*GGVEIW Trigger: CCATATCTCCACCCCTCCCAACTTCTCATTCTTTTT...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTAAGGGCTAGAATGTCCTaGAAAATGCCGAGTTGCAAA | + |
Preference number: 3 (lower is better) Translates to: DVWILPTSFRERRDKMSVRARMS*KMPSCK Trigger: TTTGCAACTCGGCATTTTCAAGGACATTCTAGCCCT...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR GCA 72 bp | GAGTATATGGGCAGCACAAATTGGCCACGGTGGGTGTaGTGGCTAGTTTTATGTCAACTTAACACAAGCTAT | + |
Preference number: 3 (lower is better) Translates to: EYMGSTNWPRWV*WLVLCQLNTSY Trigger: ATAGCTTGTGTTAAGTTGACATAAAACTAGCCAGCACACCCACCGTGGCCAATTTGTGCTGCCCATATACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CCA 72 bp | ACCTATGAGTATATGGGCAGCACAAATTGGCCACGGTaGGTGTGCTGGCTAGTTTTATGTCAACTTAACACA | + |
Preference number: 3 (lower is better) Translates to: TYEYMGSTNWPR*VCWLVLCQLNT Trigger: TGTGTTAAGTTGACATAAAACTAGCCAGCACACCCACCGTGGCCAATTTGTGCTGCCCATATACTCATAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAAACCTTCCCCAAGGAATaGTGGGTTGCAGATCTGAGG | + |
Preference number: 3 (lower is better) Translates to: ETKSSASYRAGFKNGLLKTFPKE*WVADLR Trigger: CCTCAGATCTGCAACCCACAATTCCTTGGGGAAGGT...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTACAAATGAGAAGGATTTaGGCTTGTCCTGCTTCTGAT | + |
Preference number: 3 (lower is better) Translates to: DVWILPTSFRERRDKMSVQMRRI*ACPASD Trigger: ATCAGAAGCAGGACAAGCCAAAATCCTTCTCATTTG...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR TCA 72 bp | TTCGTGAGAGCATGGTCAAAGAATCGACTTGGGTTCTaGTTCAGGTTGTTTGAAACCAAGTCATCAGCTTCC | + |
Preference number: 3 (lower is better) Translates to: FVRAWSKNRLGF*FRLFETKSSAS Trigger: GGAAGCTGATGACTTGGTTTCAAACAACCTGAATCAGAACCCAAGTCGATTCTTTGACCATGCTCTCACGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR GCA 72 bp | CAGTACAGTATCAAAAGAGCCACTGACCAGATGAAATaGTTACGCCACAAGCCCATCCTATACACTTTACAC | + |
Preference number: 3 (lower is better) Translates to: QYSIKRATDQMK*LRHKPILYTLH Trigger: GTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTCAGTGGCTCTTTTGATACTGTACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR CCA 72 bp | TATATGGGCAGCACAAATTGGCCACGGTGGGTGTGCTaGCTAGTTTTATGTCAACTTAACACAAGCTATAGT | + |
Preference number: 3 (lower is better) Translates to: YMGSTNWPRWVC*LVLCQLNTSYS Trigger: ACTATAGCTTGTGTTAAGTTGACATAAAACTAGCCAGCACACCCACCGTGGCCAATTTGTGCTGCCCATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACAACTTTATTCCCCAACTaGCTTTTGGGCATTGTTAAC | + |
Preference number: 3 (lower is better) Translates to: DQMKCLRHKPILYTLHETTLFPN*LLGIVN Trigger: GTTAACAATGCCCAAAAGCAAGTTGGGGAATAAAGT...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR-3UTR CAA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAAACCAAGGGTTTTCTTTaGGCTGGTGTGTGGACAGGA | + |
Preference number: 3 (lower is better) Translates to: ETKSSASYRAGFKNGLLKTKGFL*AGVWTG Trigger: TCCTGTCCACACACCAGCCAAAAGAAAACCCTTGGT...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CAA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACATCTGATTCAGGTTGTTaGAAACCAAGTCATCAGCTT | + |
Preference number: 3 (lower is better) Translates to: DQMKCLRHKPILYTLHETSDSGC*KPSHQL Trigger: AAGCTGATGACTTGGTTTCAAACAACCTGAATCAGA...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CAA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTAAGTGAGGCCTACCCTTaGCAACACAGTAAATTTAAA | + |
Preference number: 3 (lower is better) Translates to: DVWILPTSFRERRDKMSVSEAYP*QHSKFK Trigger: TTTAAATTTACTGTGTTGCAAAGGGTAGGCCTCACT...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR GCA 72 bp | ATCAATGAAAAGTACAATTCGCTCTTCATAGCAAGCTaGGGAGGTGCAGCCTTTAGTTTTGGTATGGATACG | + |
Preference number: 3 (lower is better) Translates to: INEKYNSLFIAS*GGAAFSFGMDT Trigger: CGTATCCATACCAAAACTAAAGGCTGCACCTCCGCAGCTTGCTATGAAGAGCGAATTGTACTTTTCATTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR CCA 72 bp | CTAAGCTGGAATCTCGAGCCAAAGGCACTTTCAAGCTaGAGTGCAGAAGATTCACAAATAGCTAAGTATTTG | + |
Preference number: 3 (lower is better) Translates to: LSWNLEPKALSS*SAEDSQIAKYL Trigger: CAAATACTTAGCTATTTGTGAATCTTCTGCACTCCAGCTTGAAAGTGCCTTTGGCTCGAGATTCCAGCTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR CCA 72 bp | TACAAATTGTCGTTATTATGGTGGCACTTTCTAAGCTaGAATCTCGAGCCAAAGGCACTTTCAAGCTGGAGT | + |
Preference number: 3 (lower is better) Translates to: YKLSLLWWHFLS*NLEPKALSSWS Trigger: ACTCCAGCTTGAAAGTGCCTTTGGCTCGAGATTCCAGCTTAGAAAGTGCCACCATAATAACGACAATTTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR CCA 72 bp | AGGTTTTACTCTAAGCTGACACACACTTTAAAGAGTTaGCTGAGGGCTAGAATGTCCTTGAAAATGCCGAGT | + |
Preference number: 3 (lower is better) Translates to: RFYSKLTHTLKS*LRARMSLKMPS Trigger: ACTCGGCATTTTCAAGGACATTCTAGCCCTCAGCCAACTCTTTAAAGTGTGTGTCAGCTTAGAGTAAAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR CCA 72 bp | AAACTCATAGACAGGTTTTCTAACATGATGGATGTGTaGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGAC | + |
Preference number: 3 (lower is better) Translates to: KLIDRFSNMMDV*ILPTSFRERRD Trigger: GTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATCCATCATGTTAGAAAACCTGTCTATGAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CAA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTATGTTCTGAAGAAGTTTaGGGTGGATTTTTATGTCTC | + |
Preference number: 3 (lower is better) Translates to: DVWILPTSFRERRDKMSVCSEEV*GGFLCL Trigger: GAGACATAAAAATCCACCCAAAACTTCTTCAGAACA...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR CCA 72 bp | ACTCTGGGCATCCCAGGACATGTTCTGAAGAAGTTTTaGGTGGATTTTTATGTCTCTTTCATTGGAAAGATG | + |
Preference number: 3 (lower is better) Translates to: TLGIPGHVLKKF*VDFYVSFIGKM Trigger: CATCTTTCCAATGAAAGAGACATAAAAATCCACCCAAAACTTCTTCAGAACATGTCCTGGGATGCCCAGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR CCA 72 bp | GTGAGGACACCAACACACAGGTATTCTACCCTTCCATaGGACGCCAGAGCATATACAAAATTATACAAATTA | + |
Preference number: 3 (lower is better) Translates to: VRTPTHRYSTLP*DARAYTKLYKL Trigger: TAATTTGTATAATTTTGTATATGCTCTGGCGTCCCATGGAAGGGTAGAATACCTGTGTGTTGGTGTCCTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR TCA 72 bp | ACAAGCTATAGTCATCTCAGAAAAGGGAACCTCAATTaGGAAAACATCTCCATAAGAAATGGCTGTAGGGCA | + |
Preference number: 3 (lower is better) Translates to: TSYSHLRKGNLN*ENISIRNGCRA Trigger: TGCCCTACAGCCATTTCTTATGGAGATGTTTTCTCAATTGAGGTTCCCTTTTCTGAGATGACTATAGCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR TCA 72 bp | GAGAGAGAGAGAATGAATATATGTGTAAAGTGCCACTaGGGCTTATGGAAAGATGCCCTTAGAGAAAATACA | + |
Preference number: 3 (lower is better) Translates to: ERERMNICVKCH*GLWKDALRENT Trigger: TGTATTTTCTCTAAGGGCATCTTTCCATAAGCCTCAGTGGCACTTTACACATATATTCATTCTCTCTCTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR TCA 72 bp | TGTGTGTGTGTGCACATTTGTATGTGCTCACACATGTaGGTGTGTGTAATGAAACTGTTACTTTCCTCTTAT | + |
Preference number: 3 (lower is better) Translates to: CVCVHICMCSHM*VCVMKLLLSSY Trigger: ATAAGAGGAAAGTAACAGTTTCATTACACACACTCACATGTGTGAGCACATACAAATGTGCACACACACACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR GCA 72 bp | GGGGGAATACACAAGAGCAAACCACTAACTCTAACCTaGACTGAGAAATTATCCTTTCCATTTGATAGTTAT | + |
Preference number: 3 (lower is better) Translates to: GGIHKSKPLTLT*TEKLSFPFDSY Trigger: ATAACTATCAAATGGAAAGGATAATTTCTCAGTGCAGGTTAGAGTTAGTGGTTTGCTCTTGTGTATTCCCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR-3UTR CAA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAATGTTCTGAAGAAGTTTaGGGTGGATTTTTATGTCTC | + |
Preference number: 3 (lower is better) Translates to: ETKSSASYRAGFKNGLLKCSEEV*GGFLCL Trigger: GAGACATAAAAATCCACCCAAAACTTCTTCAGAACA...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
CDS-3UTR CCA 90 bp | GGGGCCAGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGCGGGAAGGTGGGGCGTaGAATCCCAGGCAGCCCCAG | + |
Preference number: 4 (lower is better) Translates to: GARVAPCAVRFTVSRSIMREGGA*NPRQPQ Trigger: CTGGGGCTGCCTGGGATTCCACGCCCCACCTTCCCG...CATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCTGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CAA 72 bp | AGCCATGGTGTCTGCCCACTGGCCGGGATTCGGTGCTaGCGCATAAGTTCCTTCCCAGGGATGCAGAGCCGG | + |
Preference number: 4 (lower is better) Translates to: SHGVCPLAGIRC*RISSFPGMQSR Trigger: CCGGCTCTGCATCCCTGGGAAGGAACTTATGCGCAAGCACCGAATCCCGGCCAGTGGGCAGACACCATGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CAA 72 bp | GGGCAGCCGACACACCACCCTGACTCTGTGACATCTTaGCCAGCCCACTGCCAACCACTATCCTCTAGCTGG | + |
Preference number: 4 (lower is better) Translates to: GQPTHHPDSVTS*PAHCQPLSSSW Trigger: CCAGCTAGAGGATAGTGGTTGGCAGTGGGCTGGCAAAGATGTCACAGAGTCAGGGTGGTGTGTCGGCTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CAA 72 bp | AAGTTCCTTCCCAGGGATGCAGAGCCGGGTGATGAGTaGGTGGACATGCCGGGAGAGGCGGCATACACAGAC | + |
Preference number: 4 (lower is better) Translates to: KFLPRDAEPGDE*VDMPGEAAYTD Trigger: GTCTGTGTATGCCGCCTCTCCCGGCATGTCCACCAACTCATCACCCGGCTCTGCATCCCTGGGAAGGAACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | GGGGCCAGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGGCGAAGCTTGGTTGTaGCAATGGATCGGCCCTGCC | + |
Preference number: 4 (lower is better) Translates to: GARVAPCAVRFTVSRSIMGEAWL*QWIGPA Trigger: GGCAGGGCCGATCCATTGGCACAACCAAGCTTCGCC...CATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCTGGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | CAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCAGAGACACCAAGGGCGAAGCTTGGTTGTaGCAATGGATCGGCCCTGCC | + |
Preference number: 4 (lower is better) Translates to: QAGQEACDSDILGSRDTKGEAWL*QWIGPA Trigger: GGCAGGGCCGATCCATTGGCACAACCAAGCTTCGCC...CTTGGTGTCTCTGCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | AGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTCGGGAAGGTGGGGCGTaGAATCCCAGGCAGCCCCAG | + |
Preference number: 4 (lower is better) Translates to: RVAPCAVRFTVSRSIMESREGGA*NPRQPQ Trigger: CTGGGGCTGCCTGGGATTCCACGCCCCACCTTCCCG...ACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGTGTGTCGGGAAGGTGGGGCGTaGAATCCCAGGCAGCCCCAG | + |
Preference number: 4 (lower is better) Translates to: APCAVRFTVSRSIMESVCREGGA*NPRQPQ Trigger: CTGGGGCTGCCTGGGATTCCACGCCCCACCTTCCCG...ACACACACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | ACCAAGCCTGATGAGCCTTCTGCTTGCTCGGTTGATGACAAGTTTCTTCCAGCCCGGGAAGGTGGGGCGTaGAATCCCAGGCAGCCCCAG | + |
Preference number: 4 (lower is better) Translates to: TKPDEPSACSVDDKFLPAREGGA*NPRQPQ Trigger: CTGGGGCTGCCTGGGATTCCACGCCCCACCTTCCCG...GGCTGGAAGAAACTTGTCATCAACCGAGCAAGCAGAAGGCTCATCAGGCTTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTCGGGAAGGTGGGGCGTaGAATCCCAGGCAGCCCCAG | + |
Preference number: 4 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFREGGA*NPRQPQ Trigger: CTGGGGCTGCCTGGGATTCCACGCCCCACCTTCCCG...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GGGGCCAGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGCTTGGTTGTGCCAATaGATCGGCCCTGCCAGGCAG | + |
Preference number: 4 (lower is better) Translates to: GARVAPCAVRFTVSRSIMAWLCQ*IGPARQ Trigger: CTGCCTGGCAGGGCCGATCCATTGGCACAACCAAGC...CATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCTGGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | CAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCAGAGACACCAAGGGGCTTGACGTCTTGTaGGGATCCTGGCTGTCCTGT | + |
Preference number: 4 (lower is better) Translates to: QAGQEACDSDILGSRDTKGLDVL*GSWLSC Trigger: ACAGGACAGCCAGGATCCTCACAAGACGTCAAGCCC...CTTGGTGTCTCTGCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GGGGCCAGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGTCTGGGCTGATGACATaGCAGCCATGTGCTGCAGGG | + |
Preference number: 4 (lower is better) Translates to: GARVAPCAVRFTVSRSIMSGLMT*QPCAAG Trigger: CCCTGCAGCACATGGCTGCCATGTCATCAGCCCAGA...CATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCTGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GGGGCCAGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGTAGCCGAGACGATCTaGGCTGATGACATGGCAGCC | + |
Preference number: 4 (lower is better) Translates to: GARVAPCAVRFTVSRSIMVAETI*ADDMAA Trigger: GGCTGCCATGTCATCAGCCCAGATCGTCTCGGCTAC...CATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCTGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTAGCCCCAGCTTGTTGTaGATGGCAGTAGCCGAGACG | + |
Preference number: 4 (lower is better) Translates to: ERLFLRHQGGAERRVCGSSPSLL*MAVAET Trigger: CGTCTCGGCTACTGCCATCCACAACAAGCTGGGGCT...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GGGGCCAGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGAGCCCCAGCTTGTTGTaGATGGCAGTAGCCGAGACG | + |
Preference number: 4 (lower is better) Translates to: GARVAPCAVRFTVSRSIMSPSLL*MAVAET Trigger: CGTCTCGGCTACTGCCATCCACAACAAGCTGGGGCT...CATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCTGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | AGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGGGGGCTGTGACTGCTaGCTGGATGGGGTAGGCCTG | + |
Preference number: 4 (lower is better) Translates to: RVAPCAVRFTVSRSIMESGGCDC*LDGVGL Trigger: CAGGCCTACCCCATCCAGCCAGCAGTCACAGCCCCC...ACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | ACCAAGCCTGATGAGCCTTCTGCTTGCTCGGTTGATGACAAGTTTCTTCCAGCCGGGGGCTGTGACTGCTaGCTGGATGGGGTAGGCCTG | + |
Preference number: 4 (lower is better) Translates to: TKPDEPSACSVDDKFLPAGGCDC*LDGVGL Trigger: CAGGCCTACCCCATCCAGCCAGCAGTCACAGCCCCC...GGCTGGAAGAAACTTGTCATCAACCGAGCAAGCAGAAGGCTCATCAGGCTTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CAA 72 bp | TTGGCAGGCAGACTCACAGCAGGCAGGGACCACACGTaGCTCGGTGCTCTCATGAATACAAGCCTGCGGTTG | + |
Preference number: 4 (lower is better) Translates to: LAGRLTAGRDHT*LGALMNTSLRL Trigger: CAACCGCAGGCTTGTATTCATGAGAGCACCGAGCAACGTGTGGTCCCTGCCTGCTGTGAGTCTGCCTGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGAGGAAGAAGGCGTTTTaGGGGCCCTTTCCAAACAGC | + |
Preference number: 4 (lower is better) Translates to: SRGQFQSPERLFLRHQGGRKKAF*GPFPNS Trigger: GCTGTTTGGAAAGGGCCCTCAAAACGCCTTCTTCCT...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | ACAATCTATCCACAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCGGCGAAGCTTGGTTGTaGCAATGGATCGGCCCTGCC | + |
Preference number: 4 (lower is better) Translates to: TIYPQAGQEACDSDILGSGEAWL*QWIGPA Trigger: GGCAGGGCCGATCCATTGGCACAACCAAGCTTCGCC...GCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTGTGGATAGATTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATAGGGGGCTGTGACTGCTaGCTGGATGGGGTAGGCCTG | + |
Preference number: 4 (lower is better) Translates to: VPGRLDHVPMDVPTPMSIGGCDC*LDGVGL Trigger: CAGGCCTACCCCATCCAGCCAGCAGTCACAGCCCCC...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | ACAATCTATCCACAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCGGGCTTGACGTCTTGTaGGGATCCTGGCTGTCCTGT | + |
Preference number: 4 (lower is better) Translates to: TIYPQAGQEACDSDILGSGLDVL*GSWLSC Trigger: ACAGGACAGCCAGGATCCTCACAAGACGTCAAGCCC...GCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTGTGGATAGATTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGAGTCCGCCCAGAATTTaGCGAGGAAGAAGGCGTTTT | + |
Preference number: 4 (lower is better) Translates to: SRGQFQSPERLFLRHQGGSPPRI*RGRRRF Trigger: AAAACGCCTTCTTCCTCGTCAAATTCTGGGCGGACT...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | ACAATCTATCCACAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCTCTGGGCTGATGACATaGCAGCCATGTGCTGCAGGG | + |
Preference number: 4 (lower is better) Translates to: TIYPQAGQEACDSDILGSSGLMT*QPCAAG Trigger: CCCTGCAGCACATGGCTGCCATGTCATCAGCCCAGA...GCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTGTGGATAGATTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | AGAAAGAGCTGCAGGAAAGAGATGGTGGCTGTGCAGGAGAGGCCTCTAACAGAGTCTGGGCTGATGACATaGCAGCCATGTGCTGCAGGG | + |
Preference number: 4 (lower is better) Translates to: RKSCRKEMVAVQERPLTESGLMT*QPCAAG Trigger: CCCTGCAGCACATGGCTGCCATGTCATCAGCCCAGA...CTCTGTTAGAGGCCTCTCCTGCACAGCCACCATCTCTTTCCTGCAGCTCTTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | ACAATCTATCCACAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCGTAGCCGAGACGATCTaGGCTGATGACATGGCAGCC | + |
Preference number: 4 (lower is better) Translates to: TIYPQAGQEACDSDILGSVAETI*ADDMAA Trigger: GGCTGCCATGTCATCAGCCCAGATCGTCTCGGCTAC...GCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTGTGGATAGATTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGAGTAGCCGAGACGATCTaGGCTGATGACATGGCAGCC | + |
Preference number: 4 (lower is better) Translates to: MTGLVGPDPMVVNELGARVAETI*ADDMAA Trigger: GGCTGCCATGTCATCAGCCCAGATCGTCTCGGCTAC...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTACGGGAAGGTGGGGCGTaGAATCCCAGGCAGCCCCAG | + |
Preference number: 4 (lower is better) Translates to: DVWILPTSFRERRDKMSVREGGA*NPRQPQ Trigger: CTGGGGCTGCCTGGGATTCCACGCCCCACCTTCCCG...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | CAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTGGCTTAGGGGGCTGTGACTGCTaGCTGGATGGGGTAGGCCTG | + |
Preference number: 4 (lower is better) Translates to: QTDKGEKLRVAIPLRAGLGGCDC*LDGVGL Trigger: CAGGCCTACCCCATCCAGCCAGCAGTCACAGCCCCC...TAAGCCAGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | AGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGCTTGGTTGTGCCAATaGATCGGCCCTGCCAGGCAG | + |
Preference number: 4 (lower is better) Translates to: RVAPCAVRFTVSRSIMESAWLCQ*IGPARQ Trigger: CTGCCTGGCAGGGCCGATCCATTGGCACAACCAAGC...ACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
CDS-3UTR CCA 90 bp | ACCAAGCCTGATGAGCCTTCTGCTTGCTCGGTTGATGACAAGTTTCTTCCAGCCGCTTGGTTGTGCCAATaGATCGGCCCTGCCAGGCAG | + |
Preference number: 4 (lower is better) Translates to: TKPDEPSACSVDDKFLPAAWLCQ*IGPARQ Trigger: CTGCCTGGCAGGGCCGATCCATTGGCACAACCAAGC...GGCTGGAAGAAACTTGTCATCAACCGAGCAAGCAGAAGGCTCATCAGGCTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | CAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCAGAGACACCAAGGCCCCGGCGTCGTCTTaGATATTGCAGTTTAAGTCC | + |
Preference number: 4 (lower is better) Translates to: QAGQEACDSDILGSRDTKAPASS*ILQFKS Trigger: GGACTTAAACTGCAATATCCAAGACGACGCCGGGGC...CTTGGTGTCTCTGCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GGGGCCAGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGCCCCGGCGTCGTCTTaGATATTGCAGTTTAAGTCC | + |
Preference number: 4 (lower is better) Translates to: GARVAPCAVRFTVSRSIMAPASS*ILQFKS Trigger: GGACTTAAACTGCAATATCCAAGACGACGCCGGGGC...CATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCTGGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGGGGCTTGACGTCTTGTaGGGATCCTGGCTGTCCTGT | + |
Preference number: 4 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRGLDVL*GSWLSC Trigger: ACAGGACAGCCAGGATCCTCACAAGACGTCAAGCCC...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | AGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGGGCTTGACGTCTTGTaGGGATCCTGGCTGTCCTGT | + |
Preference number: 4 (lower is better) Translates to: RVAPCAVRFTVSRSIMESGLDVL*GSWLSC Trigger: ACAGGACAGCCAGGATCCTCACAAGACGTCAAGCCC...ACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | GGGGCCAGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGAGTCCGCCCAGAATTTaGCGAGGAAGAAGGCGTTTT | + |
Preference number: 4 (lower is better) Translates to: GARVAPCAVRFTVSRSIMSPPRI*RGRRRF Trigger: AAAACGCCTTCTTCCTCGTCAAATTCTGGGCGGACT...CATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCTGGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | CAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCAGAGACACCAAGGTCAATCGGCTTATCTaGCGAGTCGCTCATCCTTTC | + |
Preference number: 4 (lower is better) Translates to: QAGQEACDSDILGSRDTKVNRLI*RVAHPF Trigger: GAAAGGATGAGCGACTCGGCAGATAAGCCGATTGAC...CTTGGTGTCTCTGCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | GGTCTGCAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTGGCGAAGCTTGGTTGTaGCAATGGATCGGCCCTGCC | + |
Preference number: 4 (lower is better) Translates to: GLQTDKGEKLRVAIPLRAGEAWL*QWIGPA Trigger: GGCAGGGCCGATCCATTGGCACAACCAAGCTTCGCC...AGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTGCAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | GGGGCCAGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGTTGGCATGCCCGATGTaGACGAAGAGGTGTTTGTTG | + |
Preference number: 4 (lower is better) Translates to: GARVAPCAVRFTVSRSIMLACPM*TKRCLL Trigger: CAACAAACACCTCTTCGTGCACATCGGGCATGCCAA...CATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCTGGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | AGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTTCTGGGCTGATGACATaGCAGCCATGTGCTGCAGGG | + |
Preference number: 4 (lower is better) Translates to: RVAPCAVRFTVSRSIMESSGLMT*QPCAAG Trigger: CCCTGCAGCACATGGCTGCCATGTCATCAGCCCAGA...ACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTTCTGGGCTGATGACATaGCAGCCATGTGCTGCAGGG | + |
Preference number: 4 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFSGLMT*QPCAAG Trigger: CCCTGCAGCACATGGCTGCCATGTCATCAGCCCAGA...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGTGTGTGTAGCCGAGACGATCTaGGCTGATGACATGGCAGCC | + |
Preference number: 4 (lower is better) Translates to: APCAVRFTVSRSIMESVCVAETI*ADDMAA Trigger: GGCTGCCATGTCATCAGCCCAGATCGTCTCGGCTAC...ACACACACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGTGTGTAGCCCCAGCTTGTTGTaGATGGCAGTAGCCGAGACG | + |
Preference number: 4 (lower is better) Translates to: APCAVRFTVSRSIMESVCSPSLL*MAVAET Trigger: CGTCTCGGCTACTGCCATCCACAACAAGCTGGGGCT...ACACACACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACAGGGGGCTGTGACTGCTaGCTGGATGGGGTAGGCCTG | + |
Preference number: 4 (lower is better) Translates to: DQMKCLRHKPILYTLHETGGCDC*LDGVGL Trigger: CAGGCCTACCCCATCCAGCCAGCAGTCACAGCCCCC...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATAGCTTGGTTGTGCCAATaGATCGGCCCTGCCAGGCAG | + |
Preference number: 4 (lower is better) Translates to: VPGRLDHVPMDVPTPMSIAWLCQ*IGPARQ Trigger: CTGCCTGGCAGGGCCGATCCATTGGCACAACCAAGC...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGTGTGTCCACCAGGCGAAGCTTaGTTGTGCCAATGGATCGGC | + |
Preference number: 4 (lower is better) Translates to: APCAVRFTVSRSIMESVCPPGEA*LCQWIG Trigger: GCCGATCCATTGGCACAACCAAGCTTCGCCTGGTGG...ACACACACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTCCACCAGGCGAAGCTTaGTTGTGCCAATGGATCGGC | + |
Preference number: 4 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFPPGEA*LCQWIG Trigger: GCCGATCCATTGGCACAACCAAGCTTCGCCTGGTGG...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | CAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCAGAGACACCAAGCACTGTAAGAATGGTTaGCATGCCCGATGTGCACGA | + |
Preference number: 4 (lower is better) Translates to: QAGQEACDSDILGSRDTKHCKNG*HARCAR Trigger: TCGTGCACATCGGGCATGCCAACCATTCTTACAGTG...CTTGGTGTCTCTGCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | ACAATCTATCCACAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCAGGAAGAAGGCGTTTTaGGGGCCCTTTCCAAACAGC | + |
Preference number: 4 (lower is better) Translates to: TIYPQAGQEACDSDILGSRKKAF*GPFPNS Trigger: GCTGTTTGGAAAGGGCCCTCAAAACGCCTTCTTCCT...GCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTGTGGATAGATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGCACGAGATTTCCTTCTaGCAAGAACCTGAATGTGAC | + |
Preference number: 4 (lower is better) Translates to: SRGQFQSPERLFLRHQGGHEISF*QEPECD Trigger: GTCACATTCAGGTTCTTGCCAGAAGGAAATCTCGTG...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATATCTGGGCTGATGACATaGCAGCCATGTGCTGCAGGG | + |
Preference number: 4 (lower is better) Translates to: VPGRLDHVPMDVPTPMSISGLMT*QPCAAG Trigger: CCCTGCAGCACATGGCTGCCATGTCATCAGCCCAGA...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATAGTAGCCGAGACGATCTaGGCTGATGACATGGCAGCC | + |
Preference number: 4 (lower is better) Translates to: VPGRLDHVPMDVPTPMSIVAETI*ADDMAA Trigger: GGCTGCCATGTCATCAGCCCAGATCGTCTCGGCTAC...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATAAGCCCCAGCTTGTTGTaGATGGCAGTAGCCGAGACG | + |
Preference number: 4 (lower is better) Translates to: VPGRLDHVPMDVPTPMSISPSLL*MAVAET Trigger: CGTCTCGGCTACTGCCATCCACAACAAGCTGGGGCT...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | CAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCAGAGACACCAAGCTTCGTCTGATAAGATaGTTTTTCTCCTCCCACACG | + |
Preference number: 4 (lower is better) Translates to: QAGQEACDSDILGSRDTKLRLIR*FFSSHT Trigger: CGTGTGGGAGGAGAAAAATCATCTTATCAGACGAAG...CTTGGTGTCTCTGCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTCTTCGTCTGATAAGATaGTTTTTCTCCTCCCACACG | + |
Preference number: 4 (lower is better) Translates to: ERLFLRHQGGAERRVCGSLRLIR*FFSSHT Trigger: CGTGTGGGAGGAGAAAAATCATCTTATCAGACGAAG...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGAGGAAGAAGGCGTTTTaGGGGCCCTTTCCAAACAGC | + |
Preference number: 4 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRRKKAF*GPFPNS Trigger: GCTGTTTGGAAAGGGCCCTCAAAACGCCTTCTTCCT...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | GCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGTGTGTAGGAAGAAGGCGTTTTaGGGGCCCTTTCCAAACAGC | + |
Preference number: 4 (lower is better) Translates to: APCAVRFTVSRSIMESVCRKKAF*GPFPNS Trigger: GCTGTTTGGAAAGGGCCCTCAAAACGCCTTCTTCCT...ACACACACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | ACAATCTATCCACAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCAGTCCGCCCAGAATTTaGCGAGGAAGAAGGCGTTTT | + |
Preference number: 4 (lower is better) Translates to: TIYPQAGQEACDSDILGSSPPRI*RGRRRF Trigger: AAAACGCCTTCTTCCTCGTCAAATTCTGGGCGGACT...GCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTGTGGATAGATTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGAGTCAATCGGCTTATCTaGCGAGTCGCTCATCCTTTC | + |
Preference number: 4 (lower is better) Translates to: MTGLVGPDPMVVNELGARVNRLI*RVAHPF Trigger: GAAAGGATGAGCGACTCGGCAGATAAGCCGATTGAC...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | AGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGAGTCTGGGTCTCTCTaGTGTTCAAGGAAAGCGGAG | + |
Preference number: 4 (lower is better) Translates to: RVAPCAVRFTVSRSIMESESGSL*CSRKAE Trigger: CTCCGCTTTCCTTGAACAGCAGAGAGACCCAGACTC...ACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | ACCAAGCCTGATGAGCCTTCTGCTTGCTCGGTTGATGACAAGTTTCTTCCAGCCGAGTCTGGGTCTCTCTaGTGTTCAAGGAAAGCGGAG | + |
Preference number: 4 (lower is better) Translates to: TKPDEPSACSVDDKFLPAESGSL*CSRKAE Trigger: CTCCGCTTTCCTTGAACAGCAGAGAGACCCAGACTC...GGCTGGAAGAAACTTGTCATCAACCGAGCAAGCAGAAGGCTCATCAGGCTTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | CAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCAGAGACACCAAGCACGAGATTTCCTTCTaGCAAGAACCTGAATGTGAC | + |
Preference number: 4 (lower is better) Translates to: QAGQEACDSDILGSRDTKHEISF*QEPECD Trigger: GTCACATTCAGGTTCTTGCCAGAAGGAAATCTCGTG...CTTGGTGTCTCTGCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | CAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTGGCTTAGTAGCCGAGACGATCTaGGCTGATGACATGGCAGCC | + |
Preference number: 4 (lower is better) Translates to: QTDKGEKLRVAIPLRAGLVAETI*ADDMAA Trigger: GGCTGCCATGTCATCAGCCCAGATCGTCTCGGCTAC...TAAGCCAGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTAGCTTGGTTGTGCCAATaGATCGGCCCTGCCAGGCAG | + |
Preference number: 4 (lower is better) Translates to: DVWILPTSFRERRDKMSVAWLCQ*IGPARQ Trigger: CTGCCTGGCAGGGCCGATCCATTGGCACAACCAAGC...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | CAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTGGCTTACCACCAGGCGAAGCTTaGTTGTGCCAATGGATCGGC | + |
Preference number: 4 (lower is better) Translates to: QTDKGEKLRVAIPLRAGLPPGEA*LCQWIG Trigger: GCCGATCCATTGGCACAACCAAGCTTCGCCTGGTGG...TAAGCCAGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGACACTGTAAGAATGGTTaGCATGCCCGATGTGCACGA | + |
Preference number: 4 (lower is better) Translates to: MTGLVGPDPMVVNELGARHCKNG*HARCAR Trigger: TCGTGCACATCGGGCATGCCAACCATTCTTACAGTG...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | AGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGCCCCGGCGTCGTCTTaGATATTGCAGTTTAAGTCC | + |
Preference number: 4 (lower is better) Translates to: RVAPCAVRFTVSRSIMESAPASS*ILQFKS Trigger: GGACTTAAACTGCAATATCCAAGACGACGCCGGGGC...ACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGTGTGTGCCCCGGCGTCGTCTTaGATATTGCAGTTTAAGTCC | + |
Preference number: 4 (lower is better) Translates to: APCAVRFTVSRSIMESVCAPASS*ILQFKS Trigger: GGACTTAAACTGCAATATCCAAGACGACGCCGGGGC...ACACACACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACAGGGCTTGACGTCTTGTaGGGATCCTGGCTGTCCTGT | + |
Preference number: 4 (lower is better) Translates to: DQMKCLRHKPILYTLHETGLDVL*GSWLSC Trigger: ACAGGACAGCCAGGATCCTCACAAGACGTCAAGCCC...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
CDS-3UTR TCA 90 bp | GGTCTGCAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTAGGAAGAAGGCGTTTTaGGGGCCCTTTCCAAACAGC | + |
Preference number: 4 (lower is better) Translates to: GLQTDKGEKLRVAIPLRARKKAF*GPFPNS Trigger: GCTGTTTGGAAAGGGCCCTCAAAACGCCTTCTTCCT...AGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTGCAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
CDS-3UTR TCA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGAGTCCGCCCAGAATTTaGCGAGGAAGAAGGCGTTTT | + |
Preference number: 4 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRSPPRI*RGRRRF Trigger: AAAACGCCTTCTTCCTCGTCAAATTCTGGGCGGACT...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | ACAATCTATCCACAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCTTGTCCTTGGCAGTCTaGTCCATGCTTGTTACCTTC | + |
Preference number: 4 (lower is better) Translates to: TIYPQAGQEACDSDILGSLSLAV*SMLVTF Trigger: GAAGGTAACAAGCATGGATCAGACTGCCAAGGACAA...GCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTGTGGATAGATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | AGAAAGAGCTGCAGGAAAGAGATGGTGGCTGTGCAGGAGAGGCCTCTAACAGAGTTGTCCTTGGCAGTCTaGTCCATGCTTGTTACCTTC | + |
Preference number: 4 (lower is better) Translates to: RKSCRKEMVAVQERPLTELSLAV*SMLVTF Trigger: GAAGGTAACAAGCATGGATCAGACTGCCAAGGACAA...CTCTGTTAGAGGCCTCTCCTGCACAGCCACCATCTCTTTCCTGCAGCTCTTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059768.18 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | AGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGTCAATCGGCTTATCTaGCGAGTCGCTCATCCTTTC | + |
Preference number: 4 (lower is better) Translates to: RVAPCAVRFTVSRSIMESVNRLI*RVAHPF Trigger: GAAAGGATGAGCGACTCGGCAGATAAGCCGATTGAC...ACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | GCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGTGTGTGTCAATCGGCTTATCTaGCGAGTCGCTCATCCTTTC | + |
Preference number: 4 (lower is better) Translates to: APCAVRFTVSRSIMESVCVNRLI*RVAHPF Trigger: GAAAGGATGAGCGACTCGGCAGATAAGCCGATTGAC...ACACACACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATAGAGTCTGGGTCTCTCTaGTGTTCAAGGAAAGCGGAG | + |
Preference number: 4 (lower is better) Translates to: VPGRLDHVPMDVPTPMSIESGSL*CSRKAE Trigger: CTCCGCTTTCCTTGAACAGCAGAGAGACCCAGACTC...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGTTGGCATGCCCGATGTaGACGAAGAGGTGTTTGTTG | + |
Preference number: 4 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRLACPM*TKRCLL Trigger: CAACAAACACCTCTTCGTGCACATCGGGCATGCCAA...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | GCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGTGTGTTTGGCATGCCCGATGTaGACGAAGAGGTGTTTGTTG | + |
Preference number: 4 (lower is better) Translates to: APCAVRFTVSRSIMESVCLACPM*TKRCLL Trigger: CAACAAACACCTCTTCGTGCACATCGGGCATGCCAA...ACACACACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GAACCAGTGCCCCATTGGCTTTACATAAGGGAGGCACATTGCAAATGGAAACATAGCCCCAGCTTGTTGTaGATGGCAGTAGCCGAGACG | + |
Preference number: 4 (lower is better) Translates to: EPVPHWLYIREAHCKWKHSPSLL*MAVAET Trigger: CGTCTCGGCTACTGCCATCCACAACAAGCTGGGGCT...ATGTTTCCATTTGCAATGTGCCTCCCTTATGTAAAGCCAATGGGGCACTGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACACCACCAGGCGAAGCTTaGTTGTGCCAATGGATCGGC | + |
Preference number: 4 (lower is better) Translates to: DQMKCLRHKPILYTLHETPPGEA*LCQWIG Trigger: GCCGATCCATTGGCACAACCAAGCTTCGCCTGGTGG...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GAACCAGTGCCCCATTGGCTTTACATAAGGGAGGCACATTGCAAATGGAAACATCCACCAGGCGAAGCTTaGTTGTGCCAATGGATCGGC | + |
Preference number: 4 (lower is better) Translates to: EPVPHWLYIREAHCKWKHPPGEA*LCQWIG Trigger: GCCGATCCATTGGCACAACCAAGCTTCGCCTGGTGG...ATGTTTCCATTTGCAATGTGCCTCCCTTATGTAAAGCCAATGGGGCACTGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGTGTGTCACTGTAAGAATGGTTaGCATGCCCGATGTGCACGA | + |
Preference number: 4 (lower is better) Translates to: APCAVRFTVSRSIMESVCHCKNG*HARCAR Trigger: TCGTGCACATCGGGCATGCCAACCATTCTTACAGTG...ACACACACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | AGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTCACTGTAAGAATGGTTaGCATGCCCGATGTGCACGA | + |
Preference number: 4 (lower is better) Translates to: RVAPCAVRFTVSRSIMESHCKNG*HARCAR Trigger: TCGTGCACATCGGGCATGCCAACCATTCTTACAGTG...ACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGCACTGTAAGAATGGTTaGCATGCCCGATGTGCACGA | + |
Preference number: 4 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRHCKNG*HARCAR Trigger: TCGTGCACATCGGGCATGCCAACCATTCTTACAGTG...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATAGCCCCGGCGTCGTCTTaGATATTGCAGTTTAAGTCC | + |
Preference number: 4 (lower is better) Translates to: VPGRLDHVPMDVPTPMSIAPASS*ILQFKS Trigger: GGACTTAAACTGCAATATCCAAGACGACGCCGGGGC...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGCATATATTCACACATTaGCGAGCGGTTTATTCGGTA | + |
Preference number: 4 (lower is better) Translates to: SRGQFQSPERLFLRHQGGHIFTH*RAVYSV Trigger: TACCGAATAAACCGCTCGCCAATGTGTGAATATATG...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | GGTCTGCAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTAGTCCGCCCAGAATTTaGCGAGGAAGAAGGCGTTTT | + |
Preference number: 4 (lower is better) Translates to: GLQTDKGEKLRVAIPLRASPPRI*RGRRRF Trigger: AAAACGCCTTCTTCCTCGTCAAATTCTGGGCGGACT...AGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTGCAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | GGGGCCAGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGACCTTAATGGCGGCTTaGATTTCTCGAACTTTCTTT | + |
Preference number: 4 (lower is better) Translates to: GARVAPCAVRFTVSRSIMTLMAA*ISRTFF Trigger: AAAGAAAGTTCGAGAAATTCAAGCCGCCATTAAGGT...CATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCTGGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059768.18 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | ACCAAGCCTGATGAGCCTTCTGCTTGCTCGGTTGATGACAAGTTTCTTCCAGCCTTGTCCTTGGCAGTCTaGTCCATGCTTGTTACCTTC | + |
Preference number: 4 (lower is better) Translates to: TKPDEPSACSVDDKFLPALSLAV*SMLVTF Trigger: GAAGGTAACAAGCATGGATCAGACTGCCAAGGACAA...GGCTGGAAGAAACTTGTCATCAACCGAGCAAGCAGAAGGCTCATCAGGCTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATAGTCAATCGGCTTATCTaGCGAGTCGCTCATCCTTTC | + |
Preference number: 4 (lower is better) Translates to: VPGRLDHVPMDVPTPMSIVNRLI*RVAHPF Trigger: GAAAGGATGAGCGACTCGGCAGATAAGCCGATTGAC...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | CAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTGGCTTAGAGTCTGGGTCTCTCTaGTGTTCAAGGAAAGCGGAG | + |
Preference number: 4 (lower is better) Translates to: QTDKGEKLRVAIPLRAGLESGSL*CSRKAE Trigger: CTCCGCTTTCCTTGAACAGCAGAGAGACCCAGACTC...TAAGCCAGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATATTGGCATGCCCGATGTaGACGAAGAGGTGTTTGTTG | + |
Preference number: 4 (lower is better) Translates to: VPGRLDHVPMDVPTPMSILACPM*TKRCLL Trigger: CAACAAACACCTCTTCGTGCACATCGGGCATGCCAA...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | GGTCTGCAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTTTGGCATGCCCGATGTaGACGAAGAGGTGTTTGTTG | + |
Preference number: 4 (lower is better) Translates to: GLQTDKGEKLRVAIPLRALACPM*TKRCLL Trigger: CAACAAACACCTCTTCGTGCACATCGGGCATGCCAA...AGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTGCAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGAAACTCTCATACTGACTaGTCACACCATAAAAGGCCC | + |
Preference number: 4 (lower is better) Translates to: MTGLVGPDPMVVNELGARNSHTD*SHHKRP Trigger: GGGCCTTTTATGGTGTGAGCAGTCAGTATGAGAGTT...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | ACAATCTATCCACAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCAACTCTCATACTGACTaGTCACACCATAAAAGGCCC | + |
Preference number: 4 (lower is better) Translates to: TIYPQAGQEACDSDILGSNSHTD*SHHKRP Trigger: GGGCCTTTTATGGTGTGAGCAGTCAGTATGAGAGTT...GCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTGTGGATAGATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGACACGAGATTTCCTTCTaGCAAGAACCTGAATGTGAC | + |
Preference number: 4 (lower is better) Translates to: MTGLVGPDPMVVNELGARHEISF*QEPECD Trigger: GTCACATTCAGGTTCTTGCCAGAAGGAAATCTCGTG...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | ACAATCTATCCACAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCCACGAGATTTCCTTCTaGCAAGAACCTGAATGTGAC | + |
Preference number: 4 (lower is better) Translates to: TIYPQAGQEACDSDILGSHEISF*QEPECD Trigger: GTCACATTCAGGTTCTTGCCAGAAGGAAATCTCGTG...GCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTGTGGATAGATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAAGGGGGCTGTGACTGCTaGCTGGATGGGGTAGGCCTG | + |
Preference number: 4 (lower is better) Translates to: ETKSSASYRAGFKNGLLKGGCDC*LDGVGL Trigger: CAGGCCTACCCCATCCAGCCAGCAGTCACAGCCCCC...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GGGGCCAGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGCATATATTCACACATTaGCGAGCGGTTTATTCGGTA | + |
Preference number: 4 (lower is better) Translates to: GARVAPCAVRFTVSRSIMHIFTH*RAVYSV Trigger: TACCGAATAAACCGCTCGCCAATGTGTGAATATATG...CATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCTGGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | GCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGTGTGTCTTCGTCTGATAAGATaGTTTTTCTCCTCCCACACG | + |
Preference number: 4 (lower is better) Translates to: APCAVRFTVSRSIMESVCLRLIR*FFSSHT Trigger: CGTGTGGGAGGAGAAAAATCATCTTATCAGACGAAG...ACACACACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATAGCTAAGACCTGTATATaGCTAGACACCTGCTTCCTG | + |
Preference number: 4 (lower is better) Translates to: VPGRLDHVPMDVPTPMSIAKTCI*LDTCFL Trigger: CAGGAAGCAGGTGTCTAGTCATATACAGGTCTTAGC...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059768.18 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTAGAGTCTGGGTCTCTCTaGTGTTCAAGGAAAGCGGAG | + |
Preference number: 4 (lower is better) Translates to: DVWILPTSFRERRDKMSVESGSL*CSRKAE Trigger: CTCCGCTTTCCTTGAACAGCAGAGAGACCCAGACTC...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | ACCAAGCCTGATGAGCCTTCTGCTTGCTCGGTTGATGACAAGTTTCTTCCAGCCAACTCTCATACTGACTaGTCACACCATAAAAGGCCC | + |
Preference number: 4 (lower is better) Translates to: TKPDEPSACSVDDKFLPANSHTD*SHHKRP Trigger: GGGCCTTTTATGGTGTGAGCAGTCAGTATGAGAGTT...GGCTGGAAGAAACTTGTCATCAACCGAGCAAGCAGAAGGCTCATCAGGCTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR GCA 90 bp | AGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTAACTCTCATACTGACTaGTCACACCATAAAAGGCCC | + |
Preference number: 4 (lower is better) Translates to: RVAPCAVRFTVSRSIMESNSHTD*SHHKRP Trigger: GGGCCTTTTATGGTGTGAGCAGTCAGTATGAGAGTT...ACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGTGTGTCACGAGATTTCCTTCTaGCAAGAACCTGAATGTGAC | + |
Preference number: 4 (lower is better) Translates to: APCAVRFTVSRSIMESVCHEISF*QEPECD Trigger: GTCACATTCAGGTTCTTGCCAGAAGGAAATCTCGTG...ACACACACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CAA 72 bp | ACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTaGAGGGCTGGCTTAGAAACAGGGAACCTAGGCTGT | + |
Preference number: 4 (lower is better) Translates to: TDKGEKLRVAIP*RAGLETGNLGC Trigger: ACAGCCTAGGTTCCCTGTTTCTAAGCCAGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CAA 72 bp | AGGACATTGCTGCTGGGATGTATGGTAAATAGAAATTaGACTCAGAGCCTGCGGCTGGAGAACTGTCCTCTG | + |
Preference number: 4 (lower is better) Translates to: RTLLLGCMVNRN*TQSLRLENCPL Trigger: CAGAGGACAGTTCTCCAGCCGCAGGCTCTGAGTCAAATTTCTATTTACCATACATCCCAGCAGCAATGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | ACAATCTATCCACAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCCATATATTCACACATTaGCGAGCGGTTTATTCGGTA | + |
Preference number: 4 (lower is better) Translates to: TIYPQAGQEACDSDILGSHIFTH*RAVYSV Trigger: TACCGAATAAACCGCTCGCCAATGTGTGAATATATG...GCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTGTGGATAGATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR TCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTAGCTAAGACCTGTATATaGCTAGACACCTGCTTCCTG | + |
Preference number: 4 (lower is better) Translates to: DVWILPTSFRERRDKMSVAKTCI*LDTCFL Trigger: CAGGAAGCAGGTGTCTAGTCATATACAGGTCTTAGC...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059768.18 ENSMUST00000239442.2 |
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CDS-3UTR CCA 90 bp | GCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGTGTGTCATATATTCACACATTaGCGAGCGGTTTATTCGGTA | + |
Preference number: 4 (lower is better) Translates to: APCAVRFTVSRSIMESVCHIFTH*RAVYSV Trigger: TACCGAATAAACCGCTCGCCAATGTGTGAATATATG...ACACACACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
CDS-3UTR TCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACACTTCGTCTGATAAGATaGTTTTTCTCCTCCCACACG | + |
Preference number: 4 (lower is better) Translates to: DQMKCLRHKPILYTLHETLRLIR*FFSSHT Trigger: CGTGTGGGAGGAGAAAAATCATCTTATCAGACGAAG...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
CDS-3UTR TCA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTACTTCGTCTGATAAGATaGTTTTTCTCCTCCCACACG | + |
Preference number: 4 (lower is better) Translates to: DVWILPTSFRERRDKMSVLRLIR*FFSSHT Trigger: CGTGTGGGAGGAGAAAAATCATCTTATCAGACGAAG...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
CDS-3UTR TCA 90 bp | GGTCTGCAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTACCTTAATGGCGGCTTaGATTTCTCGAACTTTCTTT | + |
Preference number: 4 (lower is better) Translates to: GLQTDKGEKLRVAIPLRATLMAA*ISRTFF Trigger: AAAGAAAGTTCGAGAAATTCAAGCCGCCATTAAGGT...AGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTGCAGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059768.18 ENSMUST00000239442.2 |
||
CDS-3UTR GCA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAATTGGCATGCCCGATGTaGACGAAGAGGTGTTTGTTG | + |
Preference number: 4 (lower is better) Translates to: ETKSSASYRAGFKNGLLKLACPM*TKRCLL Trigger: CAACAAACACCTCTTCGTGCACATCGGGCATGCCAA...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
CDS-3UTR CCA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAACACTGTAAGAATGGTTaGCATGCCCGATGTGCACGA | + |
Preference number: 4 (lower is better) Translates to: ETKSSASYRAGFKNGLLKHCKNG*HARCAR Trigger: TCGTGCACATCGGGCATGCCAACCATTCTTACAGTG...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
CDS-3UTR CCA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACACATATATTCACACATTaGCGAGCGGTTTATTCGGTA | + |
Preference number: 4 (lower is better) Translates to: DQMKCLRHKPILYTLHETHIFTH*RAVYSV Trigger: TACCGAATAAACCGCTCGCCAATGTGTGAATATATG...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CAA 72 bp | GGTCAAAGAATCGACTTGGGTTCTGATTCAGGTTGTTaGAAACCAAGTCATCAGCTTCCTATAGAGCTGGAT | + |
Preference number: 4 (lower is better) Translates to: GQRIDLGSDSGC*KPSHQLPIELD Trigger: ATCCAGCTCTATAGGAAGCTGATGACTTGGTTTCAAACAACCTGAATCAGAACCCAAGTCGATTCTTTGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
CDS-3UTR TCA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAATTGTCCTTGGCAGTCTaGTCCATGCTTGTTACCTTC | + |
Preference number: 4 (lower is better) Translates to: ETKSSASYRAGFKNGLLKLSLAV*SMLVTF Trigger: GAAGGTAACAAGCATGGATCAGACTGCCAAGGACAA...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059768.18 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CAA 72 bp | GACTCTGGGCATCCCAGGACATGTTCTGAAGAAGTTTaGGGTGGATTTTTATGTCTCTTTCATTGGAAAGAT | + |
Preference number: 4 (lower is better) Translates to: DSGHPRTCSEEV*GGFLCLFHWKD Trigger: ATCTTTCCAATGAAAGAGACATAAAAATCCACCCAAAACTTCTTCAGAACATGTCCTGGGATGCCCAGAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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3UTR CAA 72 bp | CATATTCCTAACAGTTGTGTGTGTGTGTGTGCACATTaGTATGTGCTCACACATGTGAGTGTGTGTAATGAA | + |
Preference number: 4 (lower is better) Translates to: HIPNSCVCVCAH*YVLTHVSVCNE Trigger: TTCATTACACACACTCACATGTGTGAGCACATACAAATGTGCACACACACACACACAACTGTTAGGAATATG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
||
3UTR CAA 72 bp | CTGCACACACAAGACTATAACGTTGTAAGCTTAGACTaGTCTCAGTATTACCTACTTATTGCAAAAAGAGCC | + |
Preference number: 4 (lower is better) Translates to: LHTQDYNVVSLD*SQYYLLIAKRA Trigger: GGCTCTTTTTGCAATAAGTAGGTAATACTGAGACAAGTCTAAGCTTACAACGTTATAGTCTTGTGTGTGCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | CAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCAGAGACACCAAGGGCAGCCCCAGCTTGTaGTGGATGGCAGTAGCCGAG | + |
Preference number: 5 (lower is better) Translates to: QAGQEACDSDILGSRDTKGSPSL*WMAVAE Trigger: CTCGGCTACTGCCATCCACAACAAGCTGGGGCTGCC...CTTGGTGTCTCTGCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GGGGCCAGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGGCAGCCCCAGCTTGTaGTGGATGGCAGTAGCCGAG | + |
Preference number: 5 (lower is better) Translates to: GARVAPCAVRFTVSRSIMGSPSL*WMAVAE Trigger: CTCGGCTACTGCCATCCACAACAAGCTGGGGCTGCC...CATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCTGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | CAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCAGAGACACCAAGCCAGGCAGCCCCAGCTaGTTGTGGATGGCAGTAGCC | + |
Preference number: 5 (lower is better) Translates to: QAGQEACDSDILGSRDTKPGSPS*LWMAVA Trigger: GGCTACTGCCATCCACAACAAGCTGGGGCTGCCTGG...CTTGGTGTCTCTGCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS CCA 90 bp | CTCTCTGCTGTTCAAGGAAAGCGGAGAATTCCACCAGGCGAAGCTTaGTTGTGCCAATGGATCGGCCCTGCCAGGCAGGAACTGAGGGGG | + |
Preference number: 5 (lower is better) Translates to: LSAVQGKRRIPPGEA*LCQWIGPARQELRG Trigger: CCCCCTCAGTTCCTGCCTGGCAGGGCCGATCCATTGGCACAACCAAGCTTCGCCTGGTGGAATTCTCCGCTTTCCTTGAACAGCAGAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000164363.9 ENSMUST00000165036.8 ENSMUST00000168981.8 ENSMUST00000170352.9 ENSMUST00000171197.8 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GGGGCCAGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGCCAGGCGAAGCTTGGTaGTGCCAATGGATCGGCCCT | + |
Preference number: 5 (lower is better) Translates to: GARVAPCAVRFTVSRSIMPGEAW*CQWIGP Trigger: AGGGCCGATCCATTGGCACAACCAAGCTTCGCCTGG...CATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCTGGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTCCAGGCGAAGCTTGGTaGTGCCAATGGATCGGCCCT | + |
Preference number: 5 (lower is better) Translates to: ERLFLRHQGGAERRVCGSPGEAW*CQWIGP Trigger: AGGGCCGATCCATTGGCACAACCAAGCTTCGCCTGG...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGTCCACCAGGCGAAGCTaGGTTGTGCCAATGGATCGG | + |
Preference number: 5 (lower is better) Translates to: SRGQFQSPERLFLRHQGGSTRRS*VVPMDR Trigger: CCGATCCATTGGCACAACCAAGCTTCGCCTGGTGGA...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGAGGCAGCCCCAGCTTGTaGTGGATGGCAGTAGCCGAG | + |
Preference number: 5 (lower is better) Translates to: MTGLVGPDPMVVNELGARGSPSL*WMAVAE Trigger: CTCGGCTACTGCCATCCACAACAAGCTGGGGCTGCC...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | ACAATCTATCCACAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCCCAGGCAGCCCCAGCTaGTTGTGGATGGCAGTAGCC | + |
Preference number: 5 (lower is better) Translates to: TIYPQAGQEACDSDILGSPGSPS*LWMAVA Trigger: GGCTACTGCCATCCACAACAAGCTGGGGCTGCCTGG...GCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTGTGGATAGATTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | AGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGGCAGCCCCAGCTTGTaGTGGATGGCAGTAGCCGAG | + |
Preference number: 5 (lower is better) Translates to: RVAPCAVRFTVSRSIMESGSPSL*WMAVAE Trigger: CTCGGCTACTGCCATCCACAACAAGCTGGGGCTGCC...ACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | ACCAAGCCTGATGAGCCTTCTGCTTGCTCGGTTGATGACAAGTTTCTTCCAGCCGGCAGCCCCAGCTTGTaGTGGATGGCAGTAGCCGAG | + |
Preference number: 5 (lower is better) Translates to: TKPDEPSACSVDDKFLPAGSPSL*WMAVAE Trigger: CTCGGCTACTGCCATCCACAACAAGCTGGGGCTGCC...GGCTGGAAGAAACTTGTCATCAACCGAGCAAGCAGAAGGCTCATCAGGCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | AGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTCCAGGCAGCCCCAGCTaGTTGTGGATGGCAGTAGCC | + |
Preference number: 5 (lower is better) Translates to: RVAPCAVRFTVSRSIMESPGSPS*LWMAVA Trigger: GGCTACTGCCATCCACAACAAGCTGGGGCTGCCTGG...ACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGTGTGTCCAGGCAGCCCCAGCTaGTTGTGGATGGCAGTAGCC | + |
Preference number: 5 (lower is better) Translates to: APCAVRFTVSRSIMESVCPGSPS*LWMAVA Trigger: GGCTACTGCCATCCACAACAAGCTGGGGCTGCCTGG...ACACACACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | ACAATCTATCCACAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCCCAGGCGAAGCTTGGTaGTGCCAATGGATCGGCCCT | + |
Preference number: 5 (lower is better) Translates to: TIYPQAGQEACDSDILGSPGEAW*CQWIGP Trigger: AGGGCCGATCCATTGGCACAACCAAGCTTCGCCTGG...GCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTGTGGATAGATTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GGTCTGCAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTCCAGGCAGCCCCAGCTaGTTGTGGATGGCAGTAGCC | + |
Preference number: 5 (lower is better) Translates to: GLQTDKGEKLRVAIPLRAPGSPS*LWMAVA Trigger: GGCTACTGCCATCCACAACAAGCTGGGGCTGCCTGG...AGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTGCAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGCCAGGCGAAGCTTGGTaGTGCCAATGGATCGGCCCT | + |
Preference number: 5 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRPGEAW*CQWIGP Trigger: AGGGCCGATCCATTGGCACAACCAAGCTTCGCCTGG...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGATCCACCAGGCGAAGCTaGGTTGTGCCAATGGATCGG | + |
Preference number: 5 (lower is better) Translates to: MTGLVGPDPMVVNELGARSTRRS*VVPMDR Trigger: CCGATCCATTGGCACAACCAAGCTTCGCCTGGTGGA...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GGGGCCAGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGGAAGAAGGCGTTTaGAGGGCCCTTTCCAAACAG | + |
Preference number: 5 (lower is better) Translates to: GARVAPCAVRFTVSRSIMEEEGV*RALSKQ Trigger: CTGTTTGGAAAGGGCCCTCAAAACGCCTTCTTCCTC...CATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCTGGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTGAGGAAGAAGGCGTTTaGAGGGCCCTTTCCAAACAG | + |
Preference number: 5 (lower is better) Translates to: ERLFLRHQGGAERRVCGSEEEGV*RALSKQ Trigger: CTGTTTGGAAAGGGCCCTCAAAACGCCTTCTTCCTC...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | AGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTTCCACCAGGCGAAGCTaGGTTGTGCCAATGGATCGG | + |
Preference number: 5 (lower is better) Translates to: RVAPCAVRFTVSRSIMESSTRRS*VVPMDR Trigger: CCGATCCATTGGCACAACCAAGCTTCGCCTGGTGGA...ACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | ACCAAGCCTGATGAGCCTTCTGCTTGCTCGGTTGATGACAAGTTTCTTCCAGCCTCCACCAGGCGAAGCTaGGTTGTGCCAATGGATCGG | + |
Preference number: 5 (lower is better) Translates to: TKPDEPSACSVDDKFLPASTRRS*VVPMDR Trigger: CCGATCCATTGGCACAACCAAGCTTCGCCTGGTGGA...GGCTGGAAGAAACTTGTCATCAACCGAGCAAGCAGAAGGCTCATCAGGCTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GTTCCCAGGCAGCCTGTCACACTGACACCCTGCGATGTGACTTCTCTAAGATTTTCCACCAGGCGAAGCTaGGTTGTGCCAATGGATCGG | + |
Preference number: 5 (lower is better) Translates to: VPRQPVTLTPCDVTSLRFSTRRS*VVPMDR Trigger: CCGATCCATTGGCACAACCAAGCTTCGCCTGGTGGA...AAATCTTAGAGAAGTCACATCGCAGGGTGTCAGTGTGACAGGCTGCCTGGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GGGGCCAGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGTGCACGAAGAGGTGTTaGTTGTACGAGTCTGGGTCT | + |
Preference number: 5 (lower is better) Translates to: GARVAPCAVRFTVSRSIMCTKRC*LYESGS Trigger: AGACCCAGACTCGTACAACAAACACCTCTTCGTGCA...CATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCTGGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | CAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCAGAGACACCAAGTGCACGAAGAGGTGTTaGTTGTACGAGTCTGGGTCT | + |
Preference number: 5 (lower is better) Translates to: QAGQEACDSDILGSRDTKCTKRC*LYESGS Trigger: AGACCCAGACTCGTACAACAAACACCTCTTCGTGCA...CTTGGTGTCTCTGCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | CAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCAGAGACACCAAGAAGTCCGCCCAGAATTaGACGAGGAAGAAGGCGTTT | + |
Preference number: 5 (lower is better) Translates to: QAGQEACDSDILGSRDTKKSAQN*TRKKAF Trigger: AAACGCCTTCTTCCTCGTCAAATTCTGGGCGGACTT...CTTGGTGTCTCTGCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GGGGCCAGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGCCAAAGGAGCACACTTaGGTGGAACAGGTAACTGTC | + |
Preference number: 5 (lower is better) Translates to: GARVAPCAVRFTVSRSIMPKEHT*VEQVTV Trigger: GACAGTTACCTGTTCCACCAAAGTGTGCTCCTTTGG...CATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCTGGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS GCA 90 bp | ACTGACTGCTCACACCATAAAAGGCCCCGGCGTCGTCTTGGATATTaGAGTTTAAGTCCGCCGAGTCTGGGTCTCTCTGCTGTTCAAGGA | + |
Preference number: 5 (lower is better) Translates to: TDCSHHKRPRRRLGY*SLSPPSLGLSAVQG Trigger: TCCTTGAACAGCAGAGAGACCCAGACTCGGCGGACTTAAACTGCAATATCCAAGACGACGCCGGGGCCTTTTATGGTGTGAGCAGTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171197.8 |
||
CDS-3UTR CAA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACACCAGGCGAAGCTTGGTaGTGCCAATGGATCGGCCCT | + |
Preference number: 5 (lower is better) Translates to: DQMKCLRHKPILYTLHETPGEAW*CQWIGP Trigger: AGGGCCGATCCATTGGCACAACCAAGCTTCGCCTGG...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | ACAATCTATCCACAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCTGCACGAAGAGGTGTTaGTTGTACGAGTCTGGGTCT | + |
Preference number: 5 (lower is better) Translates to: TIYPQAGQEACDSDILGSCTKRC*LYESGS Trigger: AGACCCAGACTCGTACAACAAACACCTCTTCGTGCA...GCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTGTGGATAGATTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | ACAATCTATCCACAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCAAGTCCGCCCAGAATTaGACGAGGAAGAAGGCGTTT | + |
Preference number: 5 (lower is better) Translates to: TIYPQAGQEACDSDILGSKSAQN*TRKKAF Trigger: AAACGCCTTCTTCCTCGTCAAATTCTGGGCGGACTT...GCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTGTGGATAGATTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | TCACGTGGGCAATTTCAGAGCCCGGAGCGGCTATTCCTTAGACACCAGGGAGGGTCATATATTCACACATaGGCGAGCGGTTTATTCGGT | + |
Preference number: 5 (lower is better) Translates to: SRGQFQSPERLFLRHQGGSYIHT*ASGLFG Trigger: ACCGAATAAACCGCTCGCCAATGTGTGAATATATGA...CCCTCCCTGGTGTCTAAGGAATAGCCGCTCCGGGCTCTGAAATTGCCCACGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GGGGCCAGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGCAGTCTGATCCATGCTaGTTACCTTCAGCTTGGAAT | + |
Preference number: 5 (lower is better) Translates to: GARVAPCAVRFTVSRSIMQSDPC*LPSAWN Trigger: ATTCCAAGCTGAAGGTAACAAGCATGGATCAGACTG...CATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCTGGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS GCA 90 bp | TCGTCTTGGATATTGCAGTTTAAGTCCGCCGAGTCTGGGTCTCTCTaGTGTTCAAGGAAAGCGGAGAATTCCACCAGGCGAAGCTTGGTT | + |
Preference number: 5 (lower is better) Translates to: SSWILQFKSAESGSL*CSRKAENSTRRSLV Trigger: AACCAAGCTTCGCCTGGTGGAATTCTCCGCTTTCCTTGAACAGCAGAGAGACCCAGACTCGGCGGACTTAAACTGCAATATCCAAGACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171197.8 |
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CDS-3UTR CAA 90 bp | GGGGCCAGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGTTTCCCGTCCTGAGTTaGATGTATCTGGCTATCAAT | + |
Preference number: 5 (lower is better) Translates to: GARVAPCAVRFTVSRSIMFPVLS*MYLAIN Trigger: ATTGATAGCCAGATACATCAAACTCAGGACGGGAAA...CATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCTGGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | AGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTTGCACGAAGAGGTGTTaGTTGTACGAGTCTGGGTCT | + |
Preference number: 5 (lower is better) Translates to: RVAPCAVRFTVSRSIMESCTKRC*LYESGS Trigger: AGACCCAGACTCGTACAACAAACACCTCTTCGTGCA...ACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | ACCAAGCCTGATGAGCCTTCTGCTTGCTCGGTTGATGACAAGTTTCTTCCAGCCAAGTCCGCCCAGAATTaGACGAGGAAGAAGGCGTTT | + |
Preference number: 5 (lower is better) Translates to: TKPDEPSACSVDDKFLPAKSAQN*TRKKAF Trigger: AAACGCCTTCTTCCTCGTCAAATTCTGGGCGGACTT...GGCTGGAAGAAACTTGTCATCAACCGAGCAAGCAGAAGGCTCATCAGGCTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGTGTGTAAGTCCGCCCAGAATTaGACGAGGAAGAAGGCGTTT | + |
Preference number: 5 (lower is better) Translates to: APCAVRFTVSRSIMESVCKSAQN*TRKKAF Trigger: AAACGCCTTCTTCCTCGTCAAATTCTGGGCGGACTT...ACACACACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GGGGCCAGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGTCATATATTCACACATaGGCGAGCGGTTTATTCGGT | + |
Preference number: 5 (lower is better) Translates to: GARVAPCAVRFTVSRSIMSYIHT*ASGLFG Trigger: ACCGAATAAACCGCTCGCCAATGTGTGAATATATGA...CATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCTGGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GAGCGGCTATTCCTTAGACACCAGGGAGGGGCGGAGAGAAGAGTGTGTGGTAGTCACCTTAATGGCGGCTaGAATTTCTCGAACTTTCTT | + |
Preference number: 5 (lower is better) Translates to: ERLFLRHQGGAERRVCGSHLNGG*NFSNFL Trigger: AAGAAAGTTCGAGAAATTCAAGCCGCCATTAAGGTG...ACTACCACACACTCTTCTCTCCGCCCCTCCCTGGTGTCTAAGGAATAGCCGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059768.18 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATATGCACGAAGAGGTGTTaGTTGTACGAGTCTGGGTCT | + |
Preference number: 5 (lower is better) Translates to: VPGRLDHVPMDVPTPMSICTKRC*LYESGS Trigger: AGACCCAGACTCGTACAACAAACACCTCTTCGTGCA...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GGTCTGCAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTAAGTCCGCCCAGAATTaGACGAGGAAGAAGGCGTTT | + |
Preference number: 5 (lower is better) Translates to: GLQTDKGEKLRVAIPLRAKSAQN*TRKKAF Trigger: AAACGCCTTCTTCCTCGTCAAATTCTGGGCGGACTT...AGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTGCAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATACCAAAGGAGCACACTTaGGTGGAACAGGTAACTGTC | + |
Preference number: 5 (lower is better) Translates to: VPGRLDHVPMDVPTPMSIPKEHT*VEQVTV Trigger: GACAGTTACCTGTTCCACCAAAGTGTGCTCCTTTGG...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GGTCTGCAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTCCAAAGGAGCACACTTaGGTGGAACAGGTAACTGTC | + |
Preference number: 5 (lower is better) Translates to: GLQTDKGEKLRVAIPLRAPKEHT*VEQVTV Trigger: GACAGTTACCTGTTCCACCAAAGTGTGCTCCTTTGG...AGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTGCAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | AGAAAGAGCTGCAGGAAAGAGATGGTGGCTGTGCAGGAGAGGCCTCTAACAGAGCAGTCTGATCCATGCTaGTTACCTTCAGCTTGGAAT | + |
Preference number: 5 (lower is better) Translates to: RKSCRKEMVAVQERPLTEQSDPC*LPSAWN Trigger: ATTCCAAGCTGAAGGTAACAAGCATGGATCAGACTG...CTCTGTTAGAGGCCTCTCCTGCACAGCCACCATCTCTTTCCTGCAGCTCTTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059768.18 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | ATGACAGGTCTAGTGGGACCTGACCCCATGGTCGTGAACGAATTGGGTGCAAGATTTCCCGTCCTGAGTTaGATGTATCTGGCTATCAAT | + |
Preference number: 5 (lower is better) Translates to: MTGLVGPDPMVVNELGARFPVLS*MYLAIN Trigger: ATTGATAGCCAGATACATCAAACTCAGGACGGGAAA...TCTTGCACCCAATTCGTTCACGACCATGGGGTCAGGTCCCACTAGACCTGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GACCAGATGAAATGCTTACGCCACAAGCCCATCCTATACACTTTACACGAGACAGAGGAAGAAGGCGTTTaGAGGGCCCTTTCCAAACAG | + |
Preference number: 5 (lower is better) Translates to: DQMKCLRHKPILYTLHETEEEGV*RALSKQ Trigger: CTGTTTGGAAAGGGCCCTCAAAACGCCTTCTTCCTC...TGTCTCGTGTAAAGTGTATAGGATGGGCTTGTGGCGTAAGCATTTCATCTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTAGAGGAAGAAGGCGTTTaGAGGGCCCTTTCCAAACAG | + |
Preference number: 5 (lower is better) Translates to: DVWILPTSFRERRDKMSVEEEGV*RALSKQ Trigger: CTGTTTGGAAAGGGCCCTCAAAACGCCTTCTTCCTC...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | ACAATCTATCCACAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCCACCTTAATGGCGGCTaGAATTTCTCGAACTTTCTT | + |
Preference number: 5 (lower is better) Translates to: TIYPQAGQEACDSDILGSHLNGG*NFSNFL Trigger: AAGAAAGTTCGAGAAATTCAAGCCGCCATTAAGGTG...GCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTGTGGATAGATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059768.18 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | AGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTCAGTCTGATCCATGCTaGTTACCTTCAGCTTGGAAT | + |
Preference number: 5 (lower is better) Translates to: RVAPCAVRFTVSRSIMESQSDPC*LPSAWN Trigger: ATTCCAAGCTGAAGGTAACAAGCATGGATCAGACTG...ACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGTTTCCCGTCCTGAGTTaGATGTATCTGGCTATCAAT | + |
Preference number: 5 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRFPVLS*MYLAIN Trigger: ATTGATAGCCAGATACATCAAACTCAGGACGGGAAA...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTGTGTGTTTTCCCGTCCTGAGTTaGATGTATCTGGCTATCAAT | + |
Preference number: 5 (lower is better) Translates to: APCAVRFTVSRSIMESVCFPVLS*MYLAIN Trigger: ATTGATAGCCAGATACATCAAACTCAGGACGGGAAA...ACACACACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTATGCACGAAGAGGTGTTaGTTGTACGAGTCTGGGTCT | + |
Preference number: 5 (lower is better) Translates to: DVWILPTSFRERRDKMSVCTKRC*LYESGS Trigger: AGACCCAGACTCGTACAACAAACACCTCTTCGTGCA...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | AGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTTCATATATTCACACATaGGCGAGCGGTTTATTCGGT | + |
Preference number: 5 (lower is better) Translates to: RVAPCAVRFTVSRSIMESSYIHT*ASGLFG Trigger: ACCGAATAAACCGCTCGCCAATGTGTGAATATATGA...ACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | AGAAAGAGCTGCAGGAAAGAGATGGTGGCTGTGCAGGAGAGGCCTCTAACAGAGCTCGAACTTTCTTTCTaGCTAAGACCTGTATATGAC | + |
Preference number: 5 (lower is better) Translates to: RKSCRKEMVAVQERPLTELELSF*LRPVYD Trigger: GTCATATACAGGTCTTAGCAAGAAAGAAAGTTCGAG...CTCTGTTAGAGGCCTCTCCTGCACAGCCACCATCTCTTTCCTGCAGCTCTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059768.18 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | ACAATCTATCCACAGGCTGGCCAGGAAGCTTGTGACAGTGACATTCTGGGGAGCTTTCTACCATACATTTaGCCTTCGTCTGATAAGATG | + |
Preference number: 5 (lower is better) Translates to: TIYPQAGQEACDSDILGSFLPYI*PSSDKM Trigger: CATCTTATCAGACGAAGGCAAAATGTATGGTAGAAA...GCTCCCCAGAATGTCACTGTCACAAGCTTCCTGGCCAGCCTGTGGATAGATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATATTTCCCGTCCTGAGTTaGATGTATCTGGCTATCAAT | + |
Preference number: 5 (lower is better) Translates to: VPGRLDHVPMDVPTPMSIFPVLS*MYLAIN Trigger: ATTGATAGCCAGATACATCAAACTCAGGACGGGAAA...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAATCCACCAGGCGAAGCTaGGTTGTGCCAATGGATCGG | + |
Preference number: 5 (lower is better) Translates to: ETKSSASYRAGFKNGLLKSTRRS*VVPMDR Trigger: CCGATCCATTGGCACAACCAAGCTTCGCCTGGTGGA...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | AGGGTAGCACCCTGTGCGGTGAGGTTTACAGTCAGTCGTTCGATAATGGAGAGTTTTCTACCATACATTTaGCCTTCGTCTGATAAGATG | + |
Preference number: 5 (lower is better) Translates to: RVAPCAVRFTVSRSIMESFLPYI*PSSDKM Trigger: CATCTTATCAGACGAAGGCAAAATGTATGGTAGAAA...ACTCTCCATTATCGAACGACTGACTGTAAACCTCACCGCACAGGGTGCTACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | ACCAAGCCTGATGAGCCTTCTGCTTGCTCGGTTGATGACAAGTTTCTTCCAGCCTTTCTACCATACATTTaGCCTTCGTCTGATAAGATG | + |
Preference number: 5 (lower is better) Translates to: TKPDEPSACSVDDKFLPAFLPYI*PSSDKM Trigger: CATCTTATCAGACGAAGGCAAAATGTATGGTAGAAA...GGCTGGAAGAAACTTGTCATCAACCGAGCAAGCAGAAGGCTCATCAGGCTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000106638.10 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GAATCCTGCCACTTCCTTCTTCTTGACCTTGAAAAACTGAGGGATTGGGGGCGGTTTCTACCATACATTTaGCCTTCGTCTGATAAGATG | + |
Preference number: 5 (lower is better) Translates to: ESCHFLLLDLEKLRDWGRFLPYI*PSSDKM Trigger: CATCTTATCAGACGAAGGCAAAATGTATGGTAGAAA...CCGCCCCCAATCCCTCAGTTTTTCAAGGTCAAGAAGAAGGAAGTGGCAGGATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | CAGACAGATAAAGGTGAGAAACTCAGGGTAGCCATTCCTTTGAGGGCTGGCTTATCATATATTCACACATaGGCGAGCGGTTTATTCGGT | + |
Preference number: 5 (lower is better) Translates to: QTDKGEKLRVAIPLRAGLSYIHT*ASGLFG Trigger: ACCGAATAAACCGCTCGCCAATGTGTGAATATATGA...TAAGCCAGCCCTCAAAGGAATGGCTACCCTGAGTTTCTCACCTTTATCTGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GTTCCTGGCAGGCTTGACCATGTTCCAATGGATGTCCCCACACCTATGAGTATACTCGAACTTTCTTTCTaGCTAAGACCTGTATATGAC | + |
Preference number: 5 (lower is better) Translates to: VPGRLDHVPMDVPTPMSILELSF*LRPVYD Trigger: GTCATATACAGGTCTTAGCAAGAAAGAAAGTTCGAG...TATACTCATAGGTGTGGGGACATCCATTGGAACATGGTCAAGCCTGCCAGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000059768.18 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTATCATATATTCACACATaGGCGAGCGGTTTATTCGGT | + |
Preference number: 5 (lower is better) Translates to: DVWILPTSFRERRDKMSVSYIHT*ASGLFG Trigger: ACCGAATAAACCGCTCGCCAATGTGTGAATATATGA...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAACCAAAGGAGCACACTTaGGTGGAACAGGTAACTGTC | + |
Preference number: 5 (lower is better) Translates to: ETKSSASYRAGFKNGLLKPKEHT*VEQVTV Trigger: GACAGTTACCTGTTCCACCAAAGTGTGCTCCTTTGG...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GATGTGTGGATTCTGCCCACCTCTTTCAGAGAGAGAAGAGACAAAATGTCCGTATTTCTACCATACATTTaGCCTTCGTCTGATAAGATG | + |
Preference number: 5 (lower is better) Translates to: DVWILPTSFRERRDKMSVFLPYI*PSSDKM Trigger: CATCTTATCAGACGAAGGCAAAATGTATGGTAGAAA...TACGGACATTTTGTCTCTTCTCTCTCTGAAAGAGGTGGGCAGAATCCACACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS-3UTR CAA 90 bp | GAAACCAAGTCATCAGCTTCCTATAGAGCTGGATTTAAAAACGGGCTTTTGAAATCATATATTCACACATaGGCGAGCGGTTTATTCGGT | + |
Preference number: 5 (lower is better) Translates to: ETKSSASYRAGFKNGLLKSYIHT*ASGLFG Trigger: ACCGAATAAACCGCTCGCCAATGTGTGAATATATGA...TTTCAAAAGCCCGTTTTTAAATCCAGCTCTATAGGAAGCTGATGACTTGGTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS CAA 72 bp | GGGAAGGTGGGGCGTGGAATCCCAGGCAGCCCCAGCTaGTTGTGGATGGCAGTAGCCGAGACGATCTGGGCT | + |
Preference number: 6 (lower is better) Translates to: GKVGRGIPGSPS*LWMAVAETIWA Trigger: AGCCCAGATCGTCTCGGCTACTGCCATCCACAACAAGCTGGGGCTGCCTGGGATTCCACGCCCCACCTTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000164363.9 ENSMUST00000165036.8 ENSMUST00000167060.2 ENSMUST00000168981.8 ENSMUST00000170352.9 ENSMUST00000171197.8 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS CCA 72 bp | GTGGGGCGTGGAATCCCAGGCAGCCCCAGCTTGTTGTaGATGGCAGTAGCCGAGACGATCTGGGCTGATGAC | + |
Preference number: 6 (lower is better) Translates to: VGRGIPGSPSLL*MAVAETIWADD Trigger: GTCATCAGCCCAGATCGTCTCGGCTACTGCCATCCACAACAAGCTGGGGCTGCCTGGGATTCCACGCCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 12 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000164363.9 ENSMUST00000165036.8 ENSMUST00000167060.2 ENSMUST00000168981.8 ENSMUST00000170352.9 ENSMUST00000171197.8 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS CAA 90 bp | TCTCTCTGCTGTTCAAGGAAAGCGGAGAATTCCACCAGGCGAAGCTaGGTTGTGCCAATGGATCGGCCCTGCCAGGCAGGAACTGAGGGG | + |
Preference number: 6 (lower is better) Translates to: SLCCSRKAENSTRRS*VVPMDRPCQAGTEG Trigger: CCCCTCAGTTCCTGCCTGGCAGGGCCGATCCATTGGCACAACCAAGCTTCGCCTGGTGGAATTCTCCGCTTTCCTTGAACAGCAGAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000164363.9 ENSMUST00000165036.8 ENSMUST00000168981.8 ENSMUST00000170352.9 ENSMUST00000171197.8 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS GCA 72 bp | CCAGACGCCCTCCGCGTCGTTGTCAATCGGCTTATCTaGCGAGTCGCTCATCCTTTCCATGTTTTCGGCAGG | + |
Preference number: 6 (lower is better) Translates to: PDALRVVVNRLI*RVAHPFHVFGR Trigger: CCTGCCGAAAACATGGAAAGGATGAGCGACTCGGCAGATAAGCCGATTGACAACGACGCGGAGGGCGTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000164363.9 ENSMUST00000170352.9 |
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CDS CAA 72 bp | CAAGGAAAGCGGAGAATTCCACCAGGCGAAGCTTGGTaGTGCCAATGGATCGGCCCTGCCAGGCAGGAACTG | + |
Preference number: 6 (lower is better) Translates to: QGKRRIPPGEAW*CQWIGPARQEL Trigger: CAGTTCCTGCCTGGCAGGGCCGATCCATTGGCACAACCAAGCTTCGCCTGGTGGAATTCTCCGCTTTCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000164363.9 ENSMUST00000165036.8 ENSMUST00000168981.8 ENSMUST00000170352.9 ENSMUST00000171197.8 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS CCA 72 bp | GTTCAAGGAAAGCGGAGAATTCCACCAGGCGAAGCTTaGTTGTGCCAATGGATCGGCCCTGCCAGGCAGGAA | + |
Preference number: 6 (lower is better) Translates to: VQGKRRIPPGEA*LCQWIGPARQE Trigger: TTCCTGCCTGGCAGGGCCGATCCATTGGCACAACCAAGCTTCGCCTGGTGGAATTCTCCGCTTTCCTTGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000164363.9 ENSMUST00000165036.8 ENSMUST00000168981.8 ENSMUST00000170352.9 ENSMUST00000171197.8 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS CAA 72 bp | TGTTCAAGGAAAGCGGAGAATTCCACCAGGCGAAGCTaGGTTGTGCCAATGGATCGGCCCTGCCAGGCAGGA | + |
Preference number: 6 (lower is better) Translates to: CSRKAENSTRRS*VVPMDRPCQAG Trigger: TCCTGCCTGGCAGGGCCGATCCATTGGCACAACCAAGCTTCGCCTGGTGGAATTCTCCGCTTTCCTTGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000164363.9 ENSMUST00000165036.8 ENSMUST00000168981.8 ENSMUST00000170352.9 ENSMUST00000171197.8 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS GCA 72 bp | TCACACCATAAAAGGCCCCGGCGTCGTCTTGGATATTaGAGTTTAAGTCCGCCGAGTCTGGGTCTCTCTGCT | + |
Preference number: 6 (lower is better) Translates to: SHHKRPRRRLGY*SLSPPSLGLSA Trigger: AGCAGAGAGACCCAGACTCGGCGGACTTAAACTGCAATATCCAAGACGACGCCGGGGCCTTTTATGGTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171197.8 |
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CDS GCA 72 bp | ACGAAGAGGTGTTTGTTGTACGAGTCTGGGTCTCTCTaGTGTTCAAGGAAAGCGGAGAATTCCACCAGGCGA | + |
Preference number: 6 (lower is better) Translates to: TKRCLLYESGSL*CSRKAENSTRR Trigger: TCGCCTGGTGGAATTCTCCGCTTTCCTTGAACAGCAGAGAGACCCAGACTCGTACAACAAACACCTCTTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000164363.9 ENSMUST00000165036.8 ENSMUST00000168981.8 ENSMUST00000170352.9 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS GCA 72 bp | ATATTGCAGTTTAAGTCCGCCGAGTCTGGGTCTCTCTaGTGTTCAAGGAAAGCGGAGAATTCCACCAGGCGA | + |
Preference number: 6 (lower is better) Translates to: ILQFKSAESGSL*CSRKAENSTRR Trigger: TCGCCTGGTGGAATTCTCCGCTTTCCTTGAACAGCAGAGAGACCCAGACTCGGCGGACTTAAACTGCAATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171197.8 |
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CDS TCA 72 bp | CGTCTTGGATATTGCAGTTTAAGTCCGCCCAGAATTTaGCGAGGAAGAAGGCGTTTTGAGGGCCCTTTCCAA | + |
Preference number: 6 (lower is better) Translates to: RLGYCSLSPPRI*RGRRRFEGPFQ Trigger: TTGGAAAGGGCCCTCAAAACGCCTTCTTCCTCGTCAAATTCTGGGCGGACTTAAACTGCAATATCCAAGACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000059768.18 ENSMUST00000069256.12 ENSMUST00000084705.13 ENSMUST00000106638.10 ENSMUST00000164363.9 ENSMUST00000165036.8 ENSMUST00000168981.8 ENSMUST00000170352.9 ENSMUST00000239404.2 ENSMUST00000239442.2 |
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CDS TCA 72 bp | ATTTCTCGAACTTTCTTTCTTGCTAAGACCTGTATATaGCTAGACACCTGCTTCCTGGTCCTTGTCTTTCCC | + |
Preference number: 6 (lower is better) Translates to: ISRTFFLAKTCI*LDTCFLVLVFP Trigger: GGGAAAGACAAGGACCAGGAAGCAGGTGTCTAGTCATATACAGGTCTTAGCAAGAAAGAAAGTTCGAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059768.18 ENSMUST00000164363.9 ENSMUST00000165036.8 ENSMUST00000167060.2 ENSMUST00000239442.2 |