RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TDRD6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040140

Ensembl transcript IDs: ENSMUST00000045717.7, ENSMUST00000168073.9, ENSMUST00000233077.2

Found 379 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCACACATGGATTTGTCTCCCAAAGGACAACTTCCAGGGGTCAAATaGTTTAACATTTCCTCCAGCACGTTTGTTCTGGGTAGCACCGGG +
Preference number: 1 (lower is better)
Translates to: PHMDLSPKGQLPGVK*FNISSSTFVLGSTG
Trigger: CCCGGTGCTACCCAGAACAAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGACAAATCCATGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
3UTR CCA 90 bp GTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTaGCATCGGCAGCATCCTATCATGCTCATCCGGAACCTAGAAGTT +
Preference number: 1 (lower is better)
Translates to: VKRQTRLLAILLTKP*HRQHPIMLIRNLEV
Trigger: AACTTCTAGGTTCCGGATGAGCATGATAGGATGCTGCCGATGCCACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTGTCTTTTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
3UTR-3UTR GCA 90 bp GTGGCATCGGCAGCATCCTATCATGCTCATCCGGAACCTAGAAGTTTCCATTTACTTCCAGGGGTCAAATaGTTTAACATTTCCTCCAGC +
Preference number: 2 (lower is better)
Translates to: VASAASYHAHPEPRSFHLLPGVK*FNISSS
Trigger: GCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAG...TAAATGGAAACTTCTAGGTTCCGGATGAGCATGATAGGATGCTGCCGATGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
3UTR-3UTR CCA 90 bp ACAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGGCATCGGCAGCATCCCAAAATAAATTATCCTaGCTGAGAAGAAACACGAGA +
Preference number: 2 (lower is better)
Translates to: TNKVAGNLANKAVASAASQNKLS*LRRNTR
Trigger: TCTCGTGTTTCTTCTCAGCCAGGATAATTTATTTTG...GGATGCTGCCGATGCCACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
3UTR-3UTR CAA 90 bp AAGCCGTGGCATCGGCAGCATCCTATCATGCTCATCCGGAACCTAGAAGTTTCCCCACCACACATGGATTaGTCTCCCAAAGGACAACTT +
Preference number: 3 (lower is better)
Translates to: KPWHRQHPIMLIRNLEVSPPHMD*SPKGQL
Trigger: AAGTTGTCCTTTGGGAGACAAATCCATGTGTGGTGG...GGAAACTTCTAGGTTCCGGATGAGCATGATAGGATGCTGCCGATGCCACGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
3UTR CCA 72 bp CAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTaGCATCGGCAGCATCCTATCATGCTCATCCGGAAC +
Preference number: 3 (lower is better)
Translates to: QTRLLAILLTKP*HRQHPIMLIRN
Trigger: GTTCCGGATGAGCATGATAGGATGCTGCCGATGCCACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
3UTR CCA 72 bp TCTTGTCAACCTGAGACCTATCGCTTCCACCACACATaGATTTGTCTCCCAAAGGACAACTTCCAGGGGTCA +
Preference number: 3 (lower is better)
Translates to: SCQPETYRFHHT*ICLPKDNFQGS
Trigger: TGACCCCTGGAAGTTGTCCTTTGGGAGACAAATCCATGTGTGGTGGAAGCGATAGGTCTCAGGTTGACAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
3UTR CCA 72 bp AAATTATCCTGGCTGAGAAGAAACACGAGAAGGCTTTaGACTGGGGACCAAAGCCAGATGCCGCTAAATAGC +
Preference number: 3 (lower is better)
Translates to: KLSWLRRNTRRL*TGDQSQMPLNS
Trigger: GCTATTTAGCGGCATCTGGCTTTGGTCCCCAGTCCAAAGCCTTCTCGTGTTTCTTCTCAGCCAGGATAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
3UTR GCA 72 bp GATTTGTCTCCCAAAGGACAACTTCCAGGGGTCAAATaGTTTAACATTTCCTCCAGCACGTTTGTTCTGGGT +
Preference number: 3 (lower is better)
Translates to: DLSPKGQLPGVK*FNISSSTFVLG
Trigger: ACCCAGAACAAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGACAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp CTGAGAAGAAACACGAGAAGGCTTTGGACTGGGGACCAAAGCCAGATGCCGCTAGGCAGCGGTGCCACATaGGCCCCACCTGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: LRRNTRRLWTGDQSQMPLGSGAT*APPAPG
Trigger: GCCTGGTGCAGGTGGGGCTCATGTGGCACCGCTGCC...TAGCGGCATCTGGCTTTGGTCCCCAGTCCAAAGCCTTCTCGTGTTTCTTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CCTATCGCTTCCACCACACATGGATTTGTCTCCCAAAGGACAACTTCCAGGGGTGAACTCGCTACGCCCTaGCGCCAGCGAGCCCGCGCC +
Preference number: 4 (lower is better)
Translates to: PIASTTHGFVSQRTTSRGELATP*RQRARA
Trigger: GGCGCGGGCTCGCTGGCGCCAGGGCGTAGCGAGTTC...ACCCCTGGAAGTTGTCCTTTGGGAGACAAATCCATGTGTGGTGGAAGCGATAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp TCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGCTTGCGCCTGGCGGCTaGCCACGCGGCAGCGGTGCC +
Preference number: 4 (lower is better)
Translates to: SPKGQLPGVKCFNISSSTLAPGG*PRGSGA
Trigger: GGCACCGCTGCCGCGTGGTCAGCCGCCAGGCGCAAG...CGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CCTATCGCTTCCACCACACATGGATTTGTCTCCCAAAGGACAACTTCCAGGGGTCGGCTGTCTTGCGCCTaGCGGCTGACCACGCGGCAG +
Preference number: 4 (lower is better)
Translates to: PIASTTHGFVSQRTTSRGRLSCA*RLTTRQ
Trigger: CTGCCGCGTGGTCAGCCGCCAGGCGCAAGACAGCCG...ACCCCTGGAAGTTGTCCTTTGGGAGACAAATCCATGTGTGGTGGAAGCGATAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp ACAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGGCATCGGCAGCATCCACCGCGCGTGGCTGCTaGCTCCTGGATCTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: TNKVAGNLANKAVASAASTARGC*LLDLPA
Trigger: AGCCGGGAGATCCAGGAGGCAGCAGCCACGCGCGGT...GGATGCTGCCGATGCCACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp ACAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGGCATCGGCAGCATCCACCACGCGGCAGCGGTaGCACATGAGCCCCACCTGC +
Preference number: 4 (lower is better)
Translates to: TNKVAGNLANKAVASAASTTRQR*HMSPTC
Trigger: GCAGGTGGGGCTCATGTGGCACCGCTGCCGCGTGGT...GGATGCTGCCGATGCCACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp TCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGGCGAGGCCCCGGGAGTaGGCAGCCCCGGAGTCGAAC +
Preference number: 4 (lower is better)
Translates to: SPKGQLPGVKCFNISSSTARPRE*AAPESN
Trigger: GTTCGACTCCGGGGCTGCCCACTCCCGGGGCCTCGC...CGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp ACAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGGCATCGGCAGCATCCGGCTCGCGGGAGAACTaGAGCTCCGGAGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: TNKVAGNLANKAVASAASGSREN*SSGAAL
Trigger: CAGGGCAGCTCCGGAGCTCCAGTTCTCCCGCGAGCC...GGATGCTGCCGATGCCACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp GTGGCATCGGCAGCATCCTATCATGCTCATCCGGAACCTAGAAGTTTCCATTTATACTCCTCCCGCCGCTaGCCCACCAGTCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: VASAASYHAHPEPRSFHLYSSRR*PTSPHS
Trigger: GCTGTGGGGACTGGTGGGTCAGCGGCGGGAGGAGTA...TAAATGGAAACTTCTAGGTTCCGGATGAGCATGATAGGATGCTGCCGATGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp CCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTGTTCTGGGTAGCACCAAGACGCGGCTGTCTTaGGCCTGGCGGCTGACCACG +
Preference number: 4 (lower is better)
Translates to: PGVKCFNISSSTFVLGSTKTRLS*AWRLTT
Trigger: CGTGGTCAGCCGCCAGGCGCAAGACAGCCGCGTCTT...GGTGCTACCCAGAACAAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp TCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGGTGGCTGCTGCCTCCTaGATCTCCCGGCTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SPKGQLPGVKCFNISSSTVAAAS*ISRLSR
Trigger: GCGGCTGAGCCGGGAGATCCAGGAGGCAGCAGCCAC...CGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp TGTCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACTGGAGCTCCGGAGCTaGCCTGCCCTGCCGCAGTCA +
Preference number: 4 (lower is better)
Translates to: CLPKDNFQGSNALTFPPALELRS*PALPQS
Trigger: TGACTGCGGCAGGGCAGGGCAGCTCCGGAGCTCCAG...TGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGGCATCGGCAGCATCCTCCCTCTCCTCCCAGGTaGCACTGCCAGAGTCCTCAT +
Preference number: 4 (lower is better)
Translates to: QTRLLAILLTKPWHRQHPPSPPR*HCQSPH
Trigger: ATGAGGACTCTGGCAGTGCCACCTGGGAGGAGAGGG...AGGATGCTGCCGATGCCACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp CAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGGCATCGGCAGCATCCTCACAGCGCTGAGGCCTaGAGGTCTCAAGCAAGAGAG +
Preference number: 4 (lower is better)
Translates to: QTRLLAILLTKPWHRQHPHSAEA*RSQARE
Trigger: CTCTCTTGCTTGAGACCTTCAGGCCTCAGCGCTGTG...AGGATGCTGCCGATGCCACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp AAGCCGTGGCATCGGCAGCATCCTATCATGCTCATCCGGAACCTAGAAGTTTCCCCACATTCTCAGAGTTaGCCCGGTCCACCAGGAACA +
Preference number: 4 (lower is better)
Translates to: KPWHRQHPIMLIRNLEVSPHSQS*PGPPGT
Trigger: TGTTCCTGGTGGACCGGGGCAACTCTGAGAATGTGG...GGAAACTTCTAGGTTCCGGATGAGCATGATAGGATGCTGCCGATGCCACGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CCTGAGACCTATCGCTTCCACCACACATGGATTTGTCTCCCAAAGGACAACTTCACCTCGGAGGGCAGGTaGAAGAACTCGCTACGCCCT +
Preference number: 4 (lower is better)
Translates to: PETYRFHHTWICLPKDNFTSEGR*KNSLRP
Trigger: AGGGCGTAGCGAGTTCTTCCACCTGCCCTCCGAGGT...GAAGTTGTCCTTTGGGAGACAAATCCATGTGTGGTGGAAGCGATAGGTCTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp ACAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGGCATCGGCAGCATCCGGAAATCCACAGCCCTaGGGGACCATTGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: TNKVAGNLANKAVASAASGNPQP*GTIAGV
Trigger: AACCCCAGCAATGGTCCCCCAGGGCTGTGGATTTCC...GGATGCTGCCGATGCCACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTGAGGGTGGCTCCTGCCTaGCAGCCTGGAGACAGCGGT +
Preference number: 4 (lower is better)
Translates to: PKDNFQGSNALTFPPARLRVAPA*QPGDSG
Trigger: ACCGCTGTCTCCAGGCTGCCAGGCAGGAGCCACCCT...CAAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CTGAGAAGAAACACGAGAAGGCTTTGGACTGGGGACCAAAGCCAGATGCCGCTATCCTCCAAAGACAGCTaGGGTGTGGGCAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: LRRNTRRLWTGDQSQMPLSSKDS*GVGSFS
Trigger: ACTGAAGCTGCCCACACCCCAGCTGTCTTTGGAGGA...TAGCGGCATCTGGCTTTGGTCCCCAGTCCAAAGCCTTCTCGTGTTTCTTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp CCTATCGCTTCCACCACACATGGATTTGTCTCCCAAAGGACAACTTCCAGGGGTGGCTCCGCCATAAAATaGCCAGAAACATGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: PIASTTHGFVSQRTTSRGGSAIK*PETCPG
Trigger: CCCTGGGCATGTTTCTGGTCATTTTATGGCGGAGCC...ACCCCTGGAAGTTGTCCTTTGGGAGACAAATCCATGTGTGGTGGAAGCGATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp CCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTGTTCTGGGTAGCACCATCACATCTCCGCTCTaGCACTGCGGACCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: PGVKCFNISSSTFVLGSTITSPL*HCGPVW
Trigger: CCACACAGGTCCGCAGTGGCAGAGCGGAGATGTGAT...GGTGCTACCCAGAACAAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp CTGAGAAGAAACACGAGAAGGCTTTGGACTGGGGACCAAAGCCAGATGCCGCTAGAAGCTCAGAAGGGATaGTCCAAAGCTCCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: LRRNTRRLWTGDQSQMPLEAQKG*SKAPWR
Trigger: ACGCCAAGGAGCTTTGGAGCATCCCTTCTGAGCTTC...TAGCGGCATCTGGCTTTGGTCCCCAGTCCAAAGCCTTCTCGTGTTTCTTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CCTATCGCTTCCACCACACATGGATTTGTCTCCCAAAGGACAACTTCCAGGGGTTGGGGATGGCATACTTaGGTTACTACCACCGGCTCC +
Preference number: 4 (lower is better)
Translates to: PIASTTHGFVSQRTTSRGWGWHT*VTTTGS
Trigger: GGAGCCGGTGGTAGTAACCCAAGTATGCCATCCCCA...ACCCCTGGAAGTTGTCCTTTGGGAGACAAATCCATGTGTGGTGGAAGCGATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp ACAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGGCATCGGCAGCATCCTTCAGATCACCTACTTaGGACCGGGACCAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: TNKVAGNLANKAVASAASFRSPT*DRDQPL
Trigger: GAGAGGCTGGTCCCGGTCCCAAGTAGGTGATCTGAA...GGATGCTGCCGATGCCACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTGTTCTGGGTAGCACCTGCTCCAAAGCTCCTTaGCGTCCACACAGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: PGVKCFNISSSTFVLGSTCSKAP*RPHSPP
Trigger: CGGAGGACTGTGTGGACGCCAAGGAGCTTTGGAGCA...GGTGCTACCCAGAACAAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTCCACCCTTCCCGTGTTaGAGGAGGGGAGACCTGCTG +
Preference number: 4 (lower is better)
Translates to: PKGQLPGVKCFNISSSTFPPFPC*RRGDLL
Trigger: CAGCAGGTCTCCCCTCCTCCAACACGGGAAGGGTGG...AAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp CCTGAGACCTATCGCTTCCACCACACATGGATTTGTCTCCCAAAGGACAACTTCTCTATCCCCTGGCTCTaGAGAAACCAGTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PETYRFHHTWICLPKDNFSIPWL*RNQSAR
Trigger: CCTGGCTGACTGGTTTCTTCAGAGCCAGGGGATAGA...GAAGTTGTCCTTTGGGAGACAAATCCATGTGTGGTGGAAGCGATAGGTCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp GCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGGCGTTCCTCATCAGCTaGCACCAGAAGGAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: AKRQKTNKVAGNLANKAVAFLIS*HQKEPG
Trigger: CCCTGGCTCCTTCTGGTGTCAGCTGATGAGGAACGC...CACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp CTGAGAAGAAACACGAGAAGGCTTTGGACTGGGGACCAAAGCCAGATGCCGCTACCGGTTCTGTTAGTGTaGACCACAGACATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: LRRNTRRLWTGDQSQMPLPVLLV*TTDMLP
Trigger: TGGCAACATGTCTGTGGTTCACACTAACAGAACCGG...TAGCGGCATCTGGCTTTGGTCCCCAGTCCAAAGCCTTCTCGTGTTTCTTCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp TGTCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCAGGGATCACCTCGGGATaGACGTCCACGAAGGACACC +
Preference number: 4 (lower is better)
Translates to: CLPKDNFQGSNALTFPPAGITSG*TSTKDT
Trigger: GGTGTCCTTCGTGGACGTGCATCCCGAGGTGATCCC...TGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp AAGCCGTGGCATCGGCAGCATCCTATCATGCTCATCCGGAACCTAGAAGTTTCCGATAGCGGAGGCTGCTaGAGCTTACTAGTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: KPWHRQHPIMLIRNLEVSDSGGC*SLLVLS
Trigger: GGAAAGAACTAGTAAGCTGCAGCAGCCTCCGCTATC...GGAAACTTCTAGGTTCCGGATGAGCATGATAGGATGCTGCCGATGCCACGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp CCTATCGCTTCCACCACACATGGATTTGTCTCCCAAAGGACAACTTCCAGGGGTCAGCATGGAAATGCTTaGATGGGGACCAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PIASTTHGFVSQRTTSRGQHGNA*MGTSRS
Trigger: GCTTCTGCTGGTCCCCATGCAAGCATTTCCATGCTG...ACCCCTGGAAGTTGTCCTTTGGGAGACAAATCCATGTGTGGTGGAAGCGATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTTCCCCACAGCTGCACTaGGATCACCTCGGGATGCAC +
Preference number: 4 (lower is better)
Translates to: PKGQLPGVKCFNISSSTFSPQLH*DHLGMH
Trigger: GTGCATCCCGAGGTGATCCCAGTGCAGCTGTGGGGA...AAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp TCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGCTCTCAGAGAGACGGTaGATCTCCTGCGAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SPKGQLPGVKCFNISSSTLSERR*ISCERL
Trigger: GAGCCTCTCGCAGGAGATCCACCGTCTCTCTGAGAG...CGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTGGCGCCCGGTATACCTaGGCCATGCTCTCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PKGQLPGVKCFNISSSTFGARYT*AMLSER
Trigger: TCTCTCTGAGAGCATGGCCCAGGTATACCGGGCGCC...AAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp AAGCCGTGGCATCGGCAGCATCCTATCATGCTCATCCGGAACCTAGAAGTTTCCACATGCCCAGGGGAATaGGCACTGAGTCTGATGTTT +
Preference number: 4 (lower is better)
Translates to: KPWHRQHPIMLIRNLEVSTCPGE*ALSLMF
Trigger: AAACATCAGACTCAGTGCCCATTCCCCTGGGCATGT...GGAAACTTCTAGGTTCCGGATGAGCATGATAGGATGCTGCCGATGCCACGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp GTAGACACGCAAGGCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCCAGTCAGGTAGCGTTTaGGCAGCGAACAGAAGAGGC +
Preference number: 4 (lower is better)
Translates to: VDTQGKASKDKQGCWQSCQSGSV*AANRRG
Trigger: GCCTCTTCTGTTCGCTGCTCAAACGCTACCTGACTG...GCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGCCTTGCGTGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp CCTATCGCTTCCACCACACATGGATTTGTCTCCCAAAGGACAACTTCCAGGGGTTCGGAATCGGCAAACTaGCACCAAAAGTACTCAGGC +
Preference number: 4 (lower is better)
Translates to: PIASTTHGFVSQRTTSRGSESAN*HQKYSG
Trigger: GCCTGAGTACTTTTGGTGTCAGTTTGCCGATTCCGA...ACCCCTGGAAGTTGTCCTTTGGGAGACAAATCCATGTGTGGTGGAAGCGATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp GATTTGTCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCACCAGTCCCCACAGCTaGACTGGGATCACCTCGGGA +
Preference number: 4 (lower is better)
Translates to: DLSPKGQLPGVKCFNISSTSPHS*TGITSG
Trigger: TCCCGAGGTGATCCCAGTGCAGCTGTGGGGACTGGT...GGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGACAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp CCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTGCCTCCCAGGTGGCACTaGCAGAGTCCTCATCATCTG +
Preference number: 4 (lower is better)
Translates to: PKDNFQGSNALTFPPARLPPRWH*QSPHHL
Trigger: CAGATGATGAGGACTCTGGCAGTGCCACCTGGGAGG...CAAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp CCTATCGCTTCCACCACACATGGATTTGTCTCCCAAAGGACAACTTCCAGGGGTCTGGGTGGTAAGCCCTaGTTGAGAGTTTCCATTGCA +
Preference number: 4 (lower is better)
Translates to: PIASTTHGFVSQRTTSRGLGGKP*LRVSIA
Trigger: TGCAATGGAAACTCTCAAGCAGGGCTTACCACCCAG...ACCCCTGGAAGTTGTCCTTTGGGAGACAAATCCATGTGTGGTGGAAGCGATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp CCTGAGACCTATCGCTTCCACCACACATGGATTTGTCTCCCAAAGGACAACTTCAGCTTCAGTTCCAGCTaGTTCTCAGCCTCACAGTCC +
Preference number: 4 (lower is better)
Translates to: PETYRFHHTWICLPKDNFSFSSS*FSASQS
Trigger: GGACTGTGAGGCTGAGAAGCAGCTGGAACTGAAGCT...GAAGTTGTCCTTTGGGAGACAAATCCATGTGTGGTGGAAGCGATAGGTCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTAGCAGCACCAGGCGATaGAGGAGCAACACATCCAGG +
Preference number: 4 (lower is better)
Translates to: PKGQLPGVKCFNISSSTFSSTRR*RSNTSR
Trigger: CCTGGATGTGTTGCTCCTCCATCGCCTGGTGCTGCT...AAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp GTAGACACGCAAGGCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCGCCACAGGAAGCACATaGAGATCCCGGTTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: VDTQGKASKDKQGCWQSCATGST*RSRFVR
Trigger: CCTGACAAACCGGGATCTCCATGTGCTTCCTGTGGC...GCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGCCTTGCGTGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTGTTCTGGGTAGCACCTTCGCATTCACTGCCTaGCCCAGGATCAGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: PGVKCFNISSSTFVLGSTFAFTA*PRIRAF
Trigger: GAAAGCTCTGATCCTGGGCCAGGCAGTGAATGCGAA...GGTGCTACCCAGAACAAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGGCATCGGCAGCATCCTTTCCGTCGGTATATCTaGCAAGGCACAAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: QTRLLAILLTKPWHRQHPFRRYI*QGTRFQ
Trigger: CTGGAACCTTGTGCCTTGCCAGATATACCGACGGAA...AGGATGCTGCCGATGCCACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp GTAGACACGCAAGGCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCCCCCATAGGGAGCAATaGAGGCACAGTGCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: VDTQGKASKDKQGCWQSCPHREQ*RHSAGN
Trigger: GTTACCTGCACTGTGCCTCCATTGCTCCCTATGGGG...GCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGCCTTGCGTGTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGGCATCGGCAGCATCCTATGGAAATGCTTGCATaGGGACCAGCAGAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: QTRLLAILLTKPWHRQHPMEMLA*GPAEAQ
Trigger: CTGAGCTTCTGCTGGTCCCCATGCAAGCATTTCCAT...AGGATGCTGCCGATGCCACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp TCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTCCAGCGAGGCAGCATaGAAATGCTTGCATGGGGAC +
Preference number: 4 (lower is better)
Translates to: SPKGQLPGVKCFNISSSTSSEAA*KCLHGD
Trigger: GTCCCCATGCAAGCATTTCCATGCTGCCTCGCTGGA...CGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp TCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGAAGACAGCTGGGGTGTaGGCAGCTTCAGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SPKGQLPGVKCFNISSSTKTAGV*AASVPA
Trigger: AGCTGGAACTGAAGCTGCCCACACCCCAGCTGTCTT...CGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CTGAGAAGAAACACGAGAAGGCTTTGGACTGGGGACCAAAGCCAGATGCCGCTAGATTCCTGGATGTCCTaGCTGACAGCTGCAGATAAA +
Preference number: 4 (lower is better)
Translates to: LRRNTRRLWTGDQSQMPLDSWMS*LTAADK
Trigger: TTTATCTGCAGCTGTCAGCCAGGACATCCAGGAATC...TAGCGGCATCTGGCTTTGGTCCCCAGTCCAAAGCCTTCTCGTGTTTCTTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp GTGGCATCGGCAGCATCCTATCATGCTCATCCGGAACCTAGAAGTTTCCATTTACACACATCAAGGTTCTaGAGCCTTGCGCGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: VASAASYHAHPEPRSFHLHTSRF*SLARSS
Trigger: TGAGGAACGCGCAAGGCTTCAGAACCTTGATGTGTG...TAAATGGAAACTTCTAGGTTCCGGATGAGCATGATAGGATGCTGCCGATGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp CCTGAGACCTATCGCTTCCACCACACATGGATTTGTCTCCCAAAGGACAACTTCTGCTTGCCAGCACTTTaGACCTCCGTTTCCAGATAC +
Preference number: 4 (lower is better)
Translates to: PETYRFHHTWICLPKDNFCLPAL*TSVSRY
Trigger: GTATCTGGAAACGGAGGTTCAAAGTGCTGGCAAGCA...GAAGTTGTCCTTTGGGAGACAAATCCATGTGTGGTGGAAGCGATAGGTCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp TCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTGCACCTCCTTGCCCTaGAGGTTGCTAAGGAAATCC +
Preference number: 4 (lower is better)
Translates to: SPKGQLPGVKCFNISSSTCTSLP*RLLRKS
Trigger: GGATTTCCTTAGCAACCTGCAGGGCAAGGAGGTGCA...CGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp GCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGGGTATACCTGGGCCATaGTCTCAGAGAGACGGTGGA +
Preference number: 4 (lower is better)
Translates to: AKRQKTNKVAGNLANKAVGIPGP*SQRDGG
Trigger: TCCACCGTCTCTCTGAGAGCATGGCCCAGGTATACC...CACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp CCTGAGACCTATCGCTTCCACCACACATGGATTTGTCTCCCAAAGGACAACTTCGCAGATAGCGGAGGCTaGTGCAGCTTACTAGTTCTT +
Preference number: 4 (lower is better)
Translates to: PETYRFHHTWICLPKDNFADSGG*CSLLVL
Trigger: AAGAACTAGTAAGCTGCAGCAGCCTCCGCTATCTGC...GAAGTTGTCCTTTGGGAGACAAATCCATGTGTGGTGGAAGCGATAGGTCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp TCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGAATCTTCGCATTCACTaGCTGGCCCAGGATCAGAGC +
Preference number: 4 (lower is better)
Translates to: SPKGQLPGVKCFNISSSTNLRIH*LAQDQS
Trigger: GCTCTGATCCTGGGCCAGGCAGTGAATGCGAAGATT...CGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp GTGGCATCGGCAGCATCCTATCATGCTCATCCGGAACCTAGAAGTTTCCATTTAAGATGTCAGCCAGGGTaGACTTCAGAGCCAGTATCG +
Preference number: 4 (lower is better)
Translates to: VASAASYHAHPEPRSFHLRCQPG*TSEPVS
Trigger: CGATACTGGCTCTGAAGTGCACCCTGGCTGACATCT...TAAATGGAAACTTCTAGGTTCCGGATGAGCATGATAGGATGCTGCCGATGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp AAGCCGTGGCATCGGCAGCATCCTATCATGCTCATCCGGAACCTAGAAGTTTCCAACCACTCTTCCTCATaGCTTGATGCCAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: KPWHRQHPIMLIRNLEVSNHSSS*LDAKAN
Trigger: GTTTGCTTTGGCATCAAGGCATGAGGAAGAGTGGTT...GGAAACTTCTAGGTTCCGGATGAGCATGATAGGATGCTGCCGATGCCACGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp ACAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGGCATCGGCAGCATCCCTCTGTACCTCACGATaGACGGATCTCCAATTTGTG +
Preference number: 4 (lower is better)
Translates to: TNKVAGNLANKAVASAASLCTSR*TDLQFV
Trigger: CACAAATTGGAGATCCGTGCATCGTGAGGTACAGAG...GGATGCTGCCGATGCCACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CCTATCGCTTCCACCACACATGGATTTGTCTCCCAAAGGACAACTTCCAGGGGTCCCCATCCAGCTTACTaGCAGAAGAATAGAAACTGC +
Preference number: 4 (lower is better)
Translates to: PIASTTHGFVSQRTTSRGPHPAY*QKNRNC
Trigger: GCAGTTTCTATTCTTCTGCCAGTAAGCTGGATGGGG...ACCCCTGGAAGTTGTCCTTTGGGAGACAAATCCATGTGTGGTGGAAGCGATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CTGAGAAGAAACACGAGAAGGCTTTGGACTGGGGACCAAAGCCAGATGCCGCTACCAATTTGTGGACATTaGGTGCAGCTTCTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: LRRNTRRLWTGDQSQMPLPICGH*VQLLLS
Trigger: TGACAGAAGAAGCTGCACCCAATGTCCACAAATTGG...TAGCGGCATCTGGCTTTGGTCCCCAGTCCAAAGCCTTCTCGTGTTTCTTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTAGGGGAGACCTGCTGTaGTCATCATCAGAAGAGCCC +
Preference number: 4 (lower is better)
Translates to: PKGQLPGVKCFNISSSTFRGDLL*SSSEEP
Trigger: GGGCTCTTCTGATGATGACCACAGCAGGTCTCCCCT...AAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CTGAGAAGAAACACGAGAAGGCTTTGGACTGGGGACCAAAGCCAGATGCCGCTATCCTTTCCCACTGTTTaGAATACAGCCTCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: LRRNTRRLWTGDQSQMPLSFPTV*NTASEG
Trigger: ACCTTCTGAGGCTGTATTCCAAACAGTGGGAAAGGA...TAGCGGCATCTGGCTTTGGTCCCCAGTCCAAAGCCTTCTCGTGTTTCTTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
3UTR CAA 72 bp CAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTaGTTCTGGGTAGCACCGGGCTTGTTAAAGACGGCT +
Preference number: 4 (lower is better)
Translates to: QGSNALTFPPAR*FWVAPGLLKTA
Trigger: AGCCGTCTTTAACAAGCCCGGTGCTACCCAGAACAAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
3UTR CAA 72 bp AGACACGCAAGGCAAAGCGTCAAAAGACAAACAAGGTaGCTGGCAATCTTGCTAACAAAGCCGTGGCATCGG +
Preference number: 4 (lower is better)
Translates to: RHARQSVKRQTR*LAILLTKPWHR
Trigger: CCGATGCCACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGCCTTGCGTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp GCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGTCAAGAAGTTCAGCATaGGGAGAGATGGGTCCGACG +
Preference number: 4 (lower is better)
Translates to: AKRQKTNKVAGNLANKAVSRSSA*GEMGPT
Trigger: CGTCGGACCCATCTCTCCTCATGCTGAACTTCTTGA...CACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp GTAGACACGCAAGGCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCCCAGGGTTTTCGATGTaGGACACCTTGACTTCAACG +
Preference number: 4 (lower is better)
Translates to: VDTQGKASKDKQGCWQSCPGFSM*DTLTST
Trigger: CGTTGAAGTCAAGGTGTCTCACATCGAAAACCCTGG...GCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGCCTTGCGTGTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp CCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTCCTGAAACCATGCCGTaGCTTCTTCCGGGATGTGAT +
Preference number: 4 (lower is better)
Translates to: PKGQLPGVKCFNISSSTFPETMP*LLPGCD
Trigger: ATCACATCCCGGAAGAAGTCACGGCATGGTTTCAGG...AAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp GTAGACACGCAAGGCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCACTGGGGCCGTGTTCTaGCATCATTTAGTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: VDTQGKASKDKQGCWQSCTGAVF*HHLVSL
Trigger: CAGAGAGACTAAATGATGTCAGAACACGGCCCCAGT...GCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGCCTTGCGTGTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp ACAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGGCATCGGCAGCATCCTCCCATCTGGGTCTTTaGCTACAACTAAAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: TNKVAGNLANKAVASAASSHLGL*LQLKPS
Trigger: TGAAGGCTTTAGTTGTAGCCAAAGACCCAGATGGGA...GGATGCTGCCGATGCCACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
3UTR CAA 72 bp CAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTaGCTAACAAAGCCGTGGCATCGGCAGCATCCTATC +
Preference number: 4 (lower is better)
Translates to: QSVKRQTRLLAI*LTKPWHRQHPI
Trigger: GATAGGATGCTGCCGATGCCACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp GCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGTGTTCATCTTCAGCCTaGTGGATCTCAAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: AKRQKTNKVAGNLANKAVCSSSA*WISRRG
Trigger: TCCCCTCCTTGAGATCCATCAGGCTGAAGATGAACA...CACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp CCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTGTTCTGGGTAGCACCGTCCGCCAAAGCTTCTaGAACAGAGAGGGTTTTATT +
Preference number: 4 (lower is better)
Translates to: PGVKCFNISSSTFVLGSTVRQSF*NREGFI
Trigger: AATAAAACCCTCTCTGTTTCAGAAGCTTTGGCGGAC...GGTGCTACCCAGAACAAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp GATTTGTCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCTATGACTTGGCTTCTTaGGGCCAAGGTCAGGACTGG +
Preference number: 4 (lower is better)
Translates to: DLSPKGQLPGVKCFNISSYDLAS*GQGQDW
Trigger: CCAGTCCTGACCTTGGCCTCAAGAAGCCAAGTCATA...GGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGACAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp GATTTGTCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCTGTCAGAGAGCTGCTTaGCAGCACTTTGAACCTCCG +
Preference number: 4 (lower is better)
Translates to: DLSPKGQLPGVKCFNISSCQRAA*QHFEPP
Trigger: CGGAGGTTCAAAGTGCTGGCAAGCAGCTCTCTGACA...GGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGACAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp ATAAACTTTATTCAAATGTTGGGTTGCATTTGTTGCACTCCAGGTTCAAACAGACTCCAGGGTGGCTCCTaGCTGGCAGCCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: INFIQMLGCICCTPGSNRLQGGS*LAAWRQ
Trigger: CTGTCTCCAGGCTGCCAGGCAGGAGCCACCCTGGAG...TCTGTTTGAACCTGGAGTGCAACAAATGCAACCCAACATTTGAATAAAGTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp TGTCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACAGTCCAGGGGAAGTTaGATCATGAATGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: CLPKDNFQGSNALTFPPAQSRGS*IMNDSR
Trigger: CCTGGAGTCATTCATGATGCAACTTCCCCTGGACTG...TGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp GTAGACACGCAAGGCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCCTTTCAGAGTGTAGGTaGTCTGTAGCTGAGCTGGTA +
Preference number: 4 (lower is better)
Translates to: VDTQGKASKDKQGCWQSCLSECR*SVAELV
Trigger: TACCAGCTCAGCTACAGAGCACCTACACTCTGAAAG...GCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGCCTTGCGTGTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp AAGCCGTGGCATCGGCAGCATCCTATCATGCTCATCCGGAACCTAGAAGTTTCCATTTCAAGGCTTGCATaGGCAGAAGTAAGACATCAT +
Preference number: 4 (lower is better)
Translates to: KPWHRQHPIMLIRNLEVSISRLA*AEVRHH
Trigger: ATGATGTCTTACTTCTGCCCATGCAAGCCTTGAAAT...GGAAACTTCTAGGTTCCGGATGAGCATGATAGGATGCTGCCGATGCCACGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp GTAGACACGCAAGGCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCCGGATCTCCAATTTGTaGACATTGGGTGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VDTQGKASKDKQGCWQSCRISNL*TLGAAS
Trigger: AGAAGCTGCACCCAATGTCCACAAATTGGAGATCCG...GCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGCCTTGCGTGTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGGCATCGGCAGCATCCTTGCTATTTTATGACTTaGCTTCTTGAGGCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: QTRLLAILLTKPWHRQHPCYFMT*LLEAKV
Trigger: GACCTTGGCCTCAAGAAGCCAAGTCATAAAATAGCA...AGGATGCTGCCGATGCCACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp GCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGGAATACCTGGATTCCTaGATGTCCTGGCTGACAGCT +
Preference number: 4 (lower is better)
Translates to: AKRQKTNKVAGNLANKAVEYLDS*MSWLTA
Trigger: AGCTGTCAGCCAGGACATCCAGGAATCCAGGTATTC...CACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp GATTTGTCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCCATCCTCCGAATACCTaGATTCCTGGATGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: DLSPKGQLPGVKCFNISSHPPNT*IPGCPG
Trigger: GCCAGGACATCCAGGAATCCAGGTATTCGGAGGATG...GGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGACAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CCTATCGCTTCCACCACACATGGATTTGTCTCCCAAAGGACAACTTCCAGGGGTGTCTCTTATCTACCTTaGGAATCCCATTCCAGACAT +
Preference number: 4 (lower is better)
Translates to: PIASTTHGFVSQRTTSRGVSYLP*ESHSRH
Trigger: ATGTCTGGAATGGGATTCCCAAGGTAGATAAGAGAC...ACCCCTGGAAGTTGTCCTTTGGGAGACAAATCCATGTGTGGTGGAAGCGATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp CCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTGTTCTGGGTAGCACCCTTCCCCATACAGGGTaGCATAATACATATGCTCAA +
Preference number: 4 (lower is better)
Translates to: PGVKCFNISSSTFVLGSTLPHTG*HNTYAQ
Trigger: TTGAGCATATGTATTATGTCACCCTGTATGGGGAAG...GGTGCTACCCAGAACAAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp CCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTGTTGGCAAAGCCAGCTTaGGCGATGACCTTACTAATG +
Preference number: 4 (lower is better)
Translates to: PKDNFQGSNALTFPPARLLAKPA*AMTLLM
Trigger: CATTAGTAAGGTCATCGCTCAAGCTGGCTTTGCCAA...CAAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp CCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTGCTCTTCCTCATGCCTTaGTGCCAAAGCAAACACTGT +
Preference number: 4 (lower is better)
Translates to: PKDNFQGSNALTFPPARLLFLMP*CQSKHC
Trigger: ACAGTGTTTGCTTTGGCATCAAGGCATGAGGAAGAG...CAAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp CCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTGTTCTGGGTAGCACCGGATTGTACTCCGAATaGACTGTTGAGATTAATCCC +
Preference number: 4 (lower is better)
Translates to: PGVKCFNISSSTFVLGSTGLYSE*TVEINP
Trigger: GGGATTAATCTCAACAGTGCATTCGGAGTACAATCC...GGTGCTACCCAGAACAAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp CCTATCGCTTCCACCACACATGGATTTGTCTCCCAAAGGACAACTTCCAGGGGTCAGAAGAATAGAAACTaGACATTCTCTTCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: PIASTTHGFVSQRTTSRGQKNRN*TFSSSA
Trigger: AGCTGACGAAGAGAATGTGCAGTTTCTATTCTTCTG...ACCCCTGGAAGTTGTCCTTTGGGAGACAAATCCATGTGTGGTGGAAGCGATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp CCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTGTTCTGGGTAGCACCTTAAATTATAAAGACTaGACCGGAAGGCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PGVKCFNISSSTFVLGSTLNYKD*TGRPEL
Trigger: GAGCTCAGGCCTTCCGGTGCAGTCTTTATAATTTAA...GGTGCTACCCAGAACAAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp GTGGCATCGGCAGCATCCTATCATGCTCATCCGGAACCTAGAAGTTTCCATTTAAAGGTCATCCGGTTCTaGTCTCAAAATAACCCCATC +
Preference number: 4 (lower is better)
Translates to: VASAASYHAHPEPRSFHLKVIRF*SQNNPI
Trigger: GATGGGGTTATTTTGAGACCAGAACCGGATGACCTT...TAAATGGAAACTTCTAGGTTCCGGATGAGCATGATAGGATGCTGCCGATGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp GATTTGTCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAATGAGGTGGCTTCCTaGCTCCAAGTTTTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: DLSPKGQLPGVKCFNISSNEVAS*LQVFPR
Trigger: TCTGGGGAAAACTTGGAGCCAGGAAGCCACCTCATT...GGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGACAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp GTAGACACGCAAGGCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCTTTCCTCCCCCATTCTaGATTCATCCAGGATCTCTA +
Preference number: 4 (lower is better)
Translates to: VDTQGKASKDKQGCWQSCFPPPF*IHPGSL
Trigger: TAGAGATCCTGGATGAATCCAGAATGGGGGAGGAAA...GCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGCCTTGCGTGTCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp GCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGCATCCAGGATCTCTATaGCATATTGGTGATCCTGCT +
Preference number: 4 (lower is better)
Translates to: AKRQKTNKVAGNLANKAVHPGSL*HIGDPA
Trigger: AGCAGGATCACCAATATGTCATAGAGATCCTGGATG...CACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp GTAGACACGCAAGGCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCTCTAAAACAGTTTCCTaGAACCATGCCGTGACTTCT +
Preference number: 4 (lower is better)
Translates to: VDTQGKASKDKQGCWQSCSKTVS*NHAVTS
Trigger: AGAAGTCACGGCATGGTTTCAGGAAACTGTTTTAGA...GCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGCCTTGCGTGTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp GTGGCATCGGCAGCATCCTATCATGCTCATCCGGAACCTAGAAGTTTCCATTTATCTCTGAGAGGTTGTTaGTCTCAGCTTCATCTTCTA +
Preference number: 4 (lower is better)
Translates to: VASAASYHAHPEPRSFHLSLRGC*SQLHLL
Trigger: TAGAAGATGAAGCTGAGATCAACAACCTCTCAGAGA...TAAATGGAAACTTCTAGGTTCCGGATGAGCATGATAGGATGCTGCCGATGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp GCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGTTGGTTTCAAACTCCTaGAACTTGGCAAAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: AKRQKTNKVAGNLANKAVLVSNS*NLAKPA
Trigger: AGCTGGCTTTGCCAAGTTCCAGGAGTTTGAAACCAA...CACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp ACAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGGCATCGGCAGCATCCTTTACCACAGCAGTCTaGTTTGGTTTTCAAGAAGTT +
Preference number: 4 (lower is better)
Translates to: TNKVAGNLANKAVASAASFTTAV*FGFQEV
Trigger: AACTTCTTGAAAACCAAACCAGACTGCTGTGGTAAA...GGATGCTGCCGATGCCACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTTTCCAGGGGCCAAGGTaGATGCTTTTAGATTCAGTA +
Preference number: 4 (lower is better)
Translates to: PKGQLPGVKCFNISSSTFFQGPR*MLLDSV
Trigger: TACTGAATCTAAAAGCATCCACCTTGGCCCCTGGAA...AAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CCTATCGCTTCCACCACACATGGATTTGTCTCCCAAAGGACAACTTCCAGGGGTAGCTATTGTCTTTTGTaGGAATTCACAAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: PIASTTHGFVSQRTTSRGSYCLL*EFTKLG
Trigger: CCCAAGTTTTGTGAATTCCCACAAAAGACAATAGCT...ACCCCTGGAAGTTGTCCTTTGGGAGACAAATCCATGTGTGGTGGAAGCGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp ATAAACTTTATTCAAATGTTGGGTTGCATTTGTTGCACTCCAGGTTCAAACAGAAGCTCCTCCATCTGCTaGGACACAACTGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: INFIQMLGCICCTPGSNRSSSIC*DTTGTS
Trigger: GGAGGTGCCAGTTGTGTCTCAGCAGATGGAGGAGCT...TCTGTTTGAACCTGGAGTGCAACAAATGCAACCCAACATTTGAATAAAGTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp GTGGCATCGGCAGCATCCTATCATGCTCATCCGGAACCTAGAAGTTTCCATTTAGAAAGGTCGTTAATATaGGAAACATACACAGAGGTC +
Preference number: 4 (lower is better)
Translates to: VASAASYHAHPEPRSFHLERSLI*ETYTEV
Trigger: GACCTCTGTGTATGTTTCTCATATTAACGACCTTTC...TAAATGGAAACTTCTAGGTTCCGGATGAGCATGATAGGATGCTGCCGATGCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp GATTTGTCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCCTCCTCCACACCATTTaGAAGGTTCAAAACCCTTGT +
Preference number: 4 (lower is better)
Translates to: DLSPKGQLPGVKCFNISSLLHTI*KVQNPC
Trigger: ACAAGGGTTTTGAACCTTTCAAATGGTGTGGAGGAG...GGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGACAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp GATTTGTCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCTCTTGTGCTATTTTATaGCTTGGCTTCTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: DLSPKGQLPGVKCFNISSSCAIL*LGFLRP
Trigger: TGGCCTCAAGAAGCCAAGTCATAAAATAGCACAAGA...GGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGACAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp TGTCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCATGCTTATCAAGAACATaGACCACCAATTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: CLPKDNFQGSNALTFPPACLSRT*TTNSLW
Trigger: CCACAAAGAATTGGTGGTCCATGTTCTTGATAAGCA...TGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp GATTTGTCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCCACTCATGGGTGAGCTaGCAAATATGTCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: DLSPKGQLPGVKCFNISSHSWVS*QICLLS
Trigger: AGAAAGAAGACATATTTGCCAGCTCACCCATGAGTG...GGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGACAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp ATAAACTTTATTCAAATGTTGGGTTGCATTTGTTGCACTCCAGGTTCAAACAGAAGAAGGCCATTGGGCTaGTGTTCCATGACAAGCGCT +
Preference number: 4 (lower is better)
Translates to: INFIQMLGCICCTPGSNRRRPLG*CSMTSA
Trigger: AGCGCTTGTCATGGAACAGCAGCCCAATGGCCTTCT...TCTGTTTGAACCTGGAGTGCAACAAATGCAACCCAACATTTGAATAAAGTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp TCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGACCACCAATTCTTTGTaGAGTACCGTCTTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: SPKGQLPGVKCFNISSSTTTNSL*STVFLK
Trigger: TTTTAAAAAGACGGTACTCCACAAAGAATTGGTGGT...CGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp CCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTGACTTCCCAGGTGCCTTaGAATTTAACAAATTCACAT +
Preference number: 4 (lower is better)
Translates to: PKDNFQGSNALTFPPARLTSQVP*NLTNSH
Trigger: ATGTGAATTTGTTAAATTCCAAGGCACCTGGGAAGT...CAAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp GATTTGTCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCCCAACACGTCCTCTGTaGCTATGTCATAAAAATAAT +
Preference number: 4 (lower is better)
Translates to: DLSPKGQLPGVKCFNISSPTRPL*LCHKNN
Trigger: ATTATTTTTATGACATAGTCACAGAGGACGTGTTGG...GGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGACAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp TGTCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCAAGTGCTGTAACTCAATaGATTCCAGTTCTAAGAATT +
Preference number: 4 (lower is better)
Translates to: CLPKDNFQGSNALTFPPASAVTQ*IPVLRI
Trigger: AATTCTTAGAACTGGAATCCATTGAGTTACAGCACT...TGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR TCA 90 bp ATAAACTTTATTCAAATGTTGGGTTGCATTTGTTGCACTCCAGGTTCAAACAGAACACGCCTCCTCCTCTaGAACAGAAGAAAAACCTTT +
Preference number: 4 (lower is better)
Translates to: INFIQMLGCICCTPGSNRTRLLL*NRRKTF
Trigger: AAAGGTTTTTCTTCTGTTTCAGAGGAGGAGGCGTGT...TCTGTTTGAACCTGGAGTGCAACAAATGCAACCCAACATTTGAATAAAGTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR GCA 90 bp ATAAACTTTATTCAAATGTTGGGTTGCATTTGTTGCACTCCAGGTTCAAACAGAAATCTCTACACTGTGTaGTTTACTCTCTCCCGGTTT +
Preference number: 4 (lower is better)
Translates to: INFIQMLGCICCTPGSNRNLYTV*FTLSRF
Trigger: AAACCGGGAGAGAGTAAAGCACACAGTGTAGAGATT...TCTGTTTGAACCTGGAGTGCAACAAATGCAACCCAACATTTGAATAAAGTTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CCA 90 bp ATAAACTTTATTCAAATGTTGGGTTGCATTTGTTGCACTCCAGGTTCAAACAGATTTTTAGGTCATGGGTaGAATAGTAGTAAGAGTGTA +
Preference number: 4 (lower is better)
Translates to: INFIQMLGCICCTPGSNRFLGHG*NSSKSV
Trigger: TACACTCTTACTACTATTCCACCCATGACCTAAAAA...TCTGTTTGAACCTGGAGTGCAACAAATGCAACCCAACATTTGAATAAAGTTTAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS GCA 90 bp CGATGCCGACGCCCCACCCAGCGCCCAGGGACCGCGCGTGGCTGCTaGCTCCTGGATCTCCCGGCTCAGCCGCACGTACTCCTCCCGCCG +
Preference number: 5 (lower is better)
Translates to: RCRRPTQRPGTARGC*LLDLPAQPHVLLPP
Trigger: CGGCGGGAGGAGTACGTGCGGCTGAGCCGGGAGATCCAGGAGGCAGCAGCCACGCGCGGTCCCTGGGCGCTGGGTGGGGCGTCGGCATCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp CGGCGATGCCGACGCCCCACCCAGCGCCCAGGGACCGCGCGTGGCTaGTGCCTCCTGGATCTCCCGGCTCAGCCGCACGTACTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: RRCRRPTQRPGTARG*CLLDLPAQPHVLLP
Trigger: CGGGAGGAGTACGTGCGGCTGAGCCGGGAGATCCAGGAGGCAGCAGCCACGCGCGGTCCCTGGGCGCTGGGTGGGGCGTCGGCATCGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp GTGCCACATGAGCCCCACCTGCACCAGGCACAGCTCTCCCGGCGATaGCGACGCCCCACCCAGCGCCCAGGGACCGCGCGTGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: VPHEPHLHQAQLSRR*RRPTQRPGTARGCC
Trigger: GCAGCAGCCACGCGCGGTCCCTGGGCGCTGGGTGGGGCGTCGGCATCGCCGGGAGAGCTGTGCCTGGTGCAGGTGGGGCTCATGTGGCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp GCCTGGCGGCTGACCACGCGGCAGCGGTGCCACATGAGCCCCACCTaGACCAGGCACAGCTCTCCCGGCGATGCCGACGCCCCACCCAGC +
Preference number: 5 (lower is better)
Translates to: AWRLTTRQRCHMSPT*TRHSSPGDADAPPS
Trigger: GCTGGGTGGGGCGTCGGCATCGCCGGGAGAGCTGTGCCTGGTGCAGGTGGGGCTCATGTGGCACCGCTGCCGCGTGGTCAGCCGCCAGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 90 bp CTCCCGGCGATGCCGACGCCCCACCCAGCGCCCAGGGACCGCGCGTaGCTGCTGCCTCCTGGATCTCCCGGCTCAGCCGCACGTACTCCT +
Preference number: 5 (lower is better)
Translates to: LPAMPTPHPAPRDRA*LLPPGSPGSAARTP
Trigger: AGGAGTACGTGCGGCTGAGCCGGGAGATCCAGGAGGCAGCAGCCACGCGCGGTCCCTGGGCGCTGGGTGGGGCGTCGGCATCGCCGGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 90 bp GGCACCAGCCCTGCTAGCACACAGCCCAGCACCTCGGAGGGCAGGTaGAAGAACTCGCTACGCCCTGGCGCCAGCGAGCCCGCGCCCGCC +
Preference number: 5 (lower is better)
Translates to: GTSPASTQPSTSEGR*KNSLRPGASEPAPA
Trigger: GGCGGGCGCGGGCTCGCTGGCGCCAGGGCGTAGCGAGTTCTTCCACCTGCCCTCCGAGGTGCTGGGCTGTGTGCTAGCAGGGCTGGTGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 90 bp ACAGCCCAGCACCTCGGAGGGCAGGTGGAAGAACTCGCTACGCCCTaGCGCCAGCGAGCCCGCGCCCGCCGTGATGGTGCGGCCCTCATC +
Preference number: 5 (lower is better)
Translates to: TAQHLGGQVEELATP*RQRARARRDGAALI
Trigger: GATGAGGGCCGCACCATCACGGCGGGCGCGGGCTCGCTGGCGCCAGGGCGTAGCGAGTTCTTCCACCTGCCCTCCGAGGTGCTGGGCTGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 90 bp GGAAGAACTCGCTACGCCCTGGCGCCAGCGAGCCCGCGCCCGCCGTaGTGGTGCGGCCCTCATCCAGCAGGAAGACGCGGCTGTCTTGCG +
Preference number: 5 (lower is better)
Translates to: GRTRYALAPASPRPP*WCGPHPAGRRGCLA
Trigger: CGCAAGACAGCCGCGTCTTCCTGCTGGATGAGGGCCGCACCATCACGGCGGGCGCGGGCTCGCTGGCGCCAGGGCGTAGCGAGTTCTTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp GCCGTGATGGTGCGGCCCTCATCCAGCAGGAAGACGCGGCTGTCTTaGGCCTGGCGGCTGACCACGCGGCAGCGGTGCCACATGAGCCCC +
Preference number: 5 (lower is better)
Translates to: AVMVRPSSSRKTRLS*AWRLTTRQRCHMSP
Trigger: GGGGCTCATGTGGCACCGCTGCCGCGTGGTCAGCCGCCAGGCGCAAGACAGCCGCGTCTTCCTGCTGGATGAGGGCCGCACCATCACGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp AAGACGCGGCTGTCTTGCGCCTGGCGGCTGACCACGCGGCAGCGGTaGCACATGAGCCCCACCTGCACCAGGCACAGCTCTCCCGGCGAT +
Preference number: 5 (lower is better)
Translates to: KTRLSCAWRLTTRQR*HMSPTCTRHSSPGD
Trigger: ATCGCCGGGAGAGCTGTGCCTGGTGCAGGTGGGGCTCATGTGGCACCGCTGCCGCGTGGTCAGCCGCCAGGCGCAAGACAGCCGCGTCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 90 bp ATGGTGCGGCCCTCATCCAGCAGGAAGACGCGGCTGTCTTGCGCCTaGCGGCTGACCACGCGGCAGCGGTGCCACATGAGCCCCACCTGC +
Preference number: 5 (lower is better)
Translates to: MVRPSSSRKTRLSCA*RLTTRQRCHMSPTC
Trigger: GCAGGTGGGGCTCATGTGGCACCGCTGCCGCGTGGTCAGCCGCCAGGCGCAAGACAGCCGCGTCTTCCTGCTGGATGAGGGCCGCACCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 90 bp GCCTCCTGGATCTCCCGGCTCAGCCGCACGTACTCCTCCCGCCGCTaGCCCACCAGTCCCCACAGCTGCACTGGGATCACCTCGGGATGC +
Preference number: 5 (lower is better)
Translates to: ASWISRLSRTYSSRR*PTSPHSCTGITSGC
Trigger: GCATCCCGAGGTGATCCCAGTGCAGCTGTGGGGACTGGTGGGTCAGCGGCGGGAGGAGTACGTGCGGCTGAGCCGGGAGATCCAGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp TTGCCCTGCAGGTTGCTAAGGAAATCCACAGCCCTGGGGGACCATTaGTGGGGTTCGCCACCGCCAGTGCCACCACCGCCCGCGGGCACC +
Preference number: 5 (lower is better)
Translates to: LPCRLLRKSTALGDH*WGSPPPVPPPPAGT
Trigger: GGTGCCCGCGGGCGGTGGTGGCACTGGCGGTGGCGAACCCCAGCAATGGTCCCCCAGGGCTGTGGATTTCCTTAGCAACCTGCAGGGCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp GGGCGCGGCTCGCGGGAGAACTGGAGCTCCGGAGCTGCCCTGCCCTaGCGCAGTCAGGTAGCGTTTGAGCAGCGAACAGAAGAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: GRGSRENWSSGAALP*RSQVAFEQRTEEAV
Trigger: GACAGCCTCTTCTGTTCGCTGCTCAAACGCTACCTGACTGCGGCAGGGCAGGGCAGCTCCGGAGCTCCAGTTCTCCCGCGAGCCGCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 90 bp CACGTACTCCTCCCGCCGCTGACCCACCAGTCCCCACAGCTGCACTaGGATCACCTCGGGATGCACGTCCACGAAGGACACCCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: HVLLPPLTHQSPQLH*DHLGMHVHEGHPQG
Trigger: GCCCTGCGGGTGTCCTTCGTGGACGTGCATCCCGAGGTGATCCCAGTGCAGCTGTGGGGACTGGTGGGTCAGCGGCGGGAGGAGTACGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 90 bp CTGGAGCTCCGGAGCTGCCCTGCCCTGCCGCAGTCAGGTAGCGTTTaGGCAGCGAACAGAAGAGGCTGTCCGGCACTTGCCGGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: LELRSCPALPQSGSV*AANRRGCPALAGPD
Trigger: GTCTGGCCCGGCAAGTGCCGGACAGCCTCTTCTGTTCGCTGCTCAAACGCTACCTGACTGCGGCAGGGCAGGGCAGCTCCGGAGCTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 90 bp AGGCTGTCCGGCACTTGCCGGGCCAGACCCAGCTCCTCCATCTGCTaGGACACAACTGGCACCTCCAGCAGCACCAGGCGATGGAGGAGC +
Preference number: 5 (lower is better)
Translates to: RLSGTCRARPSSSIC*DTTGTSSSTRRWRS
Trigger: GCTCCTCCATCGCCTGGTGCTGCTGGAGGTGCCAGTTGTGTCTCAGCAGATGGAGGAGCTGGGTCTGGCCCGGCAAGTGCCGGACAGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 90 bp ATCCAACCCAGGATGCTCTTGTTTGGGCGCGGCTCGCGGGAGAACTaGAGCTCCGGAGCTGCCCTGCCCTGCCGCAGTCAGGTAGCGTTT +
Preference number: 5 (lower is better)
Translates to: IQPRMLLFGRGSREN*SSGAALPCRSQVAF
Trigger: AAACGCTACCTGACTGCGGCAGGGCAGGGCAGCTCCGGAGCTCCAGTTCTCCCGCGAGCCGCGCCCAAACAAGAGCATCCTGGGTTGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 90 bp CACTTGCCGGGCCAGACCCAGCTCCTCCATCTGCTGAGACACAACTaGCACCTCCAGCAGCACCAGGCGATGGAGGAGCAACACATCCAG +
Preference number: 5 (lower is better)
Translates to: HLPGQTQLLHLLRHN*HLQQHQAMEEQHIQ
Trigger: CTGGATGTGTTGCTCCTCCATCGCCTGGTGCTGCTGGAGGTGCCAGTTGTGTCTCAGCAGATGGAGGAGCTGGGTCTGGCCCGGCAAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 90 bp CTGCCAGAGTCCTCATCATCTGTCCCCACAGGCGCCCGGTATACCTaGGCCATGCTCTCAGAGAGACGGTGGATCTCCTGCGAGAGGCTC +
Preference number: 5 (lower is better)
Translates to: LPESSSSVPTGARYT*AMLSERRWISCERL
Trigger: GAGCCTCTCGCAGGAGATCCACCGTCTCTCTGAGAGCATGGCCCAGGTATACCGGGCGCCTGTGGGGACAGATGATGAGGACTCTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 90 bp CAGCTGCTTCTCAGCCTCACAGTCCAGGGGAAGTTGCATCATGAATaGCTCCAGGGTGGCTCCTGCCTGGCAGCCTGGAGACAGCGGTGC +
Preference number: 5 (lower is better)
Translates to: QLLLSLTVQGKLHHE*LQGGSCLAAWRQRC
Trigger: GCACCGCTGTCTCCAGGCTGCCAGGCAGGAGCCACCCTGGAGTCATTCATGATGCAACTTCCCCTGGACTGTGAGGCTGAGAAGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp TGGAGGAGCAACACATCCAGGACCCGTCCGTGCACCTCCTTGCCCTaGAGGTTGCTAAGGAAATCCACAGCCCTGGGGGACCATTGCTGG +
Preference number: 5 (lower is better)
Translates to: WRSNTSRTRPCTSLP*RLLRKSTALGDHCW
Trigger: CCAGCAATGGTCCCCCAGGGCTGTGGATTTCCTTAGCAACCTGCAGGGCAAGGAGGTGCACGGACGGGTCCTGGATGTGTTGCTCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp AGCAGCACCAGGCGATGGAGGAGCAACACATCCAGGACCCGTCCGTaGACCTCCTTGCCCTGCAGGTTGCTAAGGAAATCCACAGCCCTG +
Preference number: 5 (lower is better)
Translates to: SSTRRWRSNTSRTRP*TSLPCRLLRKSTAL
Trigger: CAGGGCTGTGGATTTCCTTAGCAACCTGCAGGGCAAGGAGGTGCACGGACGGGTCCTGGATGTGTTGCTCCTCCATCGCCTGGTGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp AGTCCTCATCATCTGTCCCCACAGGCGCCCGGTATACCTGGGCCATaGTCTCAGAGAGACGGTGGATCTCCTGCGAGAGGCTCCGCAGTT +
Preference number: 5 (lower is better)
Translates to: SPHHLSPQAPGIPGP*SQRDGGSPARGSAV
Trigger: AACTGCGGAGCCTCTCGCAGGAGATCCACCGTCTCTCTGAGAGCATGGCCCAGGTATACCGGGCGCCTGTGGGGACAGATGATGAGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 90 bp TCCTTCCGTAATCGACGTGAAGCACCTGAGCACAGCGCTGAGGCCTaGAGGTCTCAAGCAAGAGAGCCCGGTACCACTGTCCGTCCAAGC +
Preference number: 5 (lower is better)
Translates to: SFRNRREAPEHSAEA*RSQAREPGTTVRPS
Trigger: GCTTGGACGGACAGTGGTACCGGGCTCTCTTGCTTGAGACCTTCAGGCCTCAGCGCTGTGCTCAGGTGCTTCACGTCGATTACGGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp CCCGCTAATCAGAGCTCTGGACCATCTCCCGCTTGCTGTTCGCTTTaGCAGACAAACACGAGTGTCCCCCTCGTAGGGAGATGGCTCGCT +
Preference number: 5 (lower is better)
Translates to: PANQSSGPSPACCSL*QTNTSVPLVGRWLA
Trigger: AGCGAGCCATCTCCCTACGAGGGGGACACTCGTGTTTGTCTGGCAAAGCGAACAGCAAGCGGGAGATGGTCCAGAGCTCTGATTAGCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS-3UTR CAA 90 bp CCTGAGACCTATCGCTTCCACCACACATGGATTTGTCTCCCAAAGGACAACTTCGAAGACGCGGCTGTCTaGCGCCTGGCGGCTGACCAC +
Preference number: 5 (lower is better)
Translates to: PETYRFHHTWICLPKDNFEDAAV*RLAADH
Trigger: GTGGTCAGCCGCCAGGCGCAAGACAGCCGCGTCTTC...GAAGTTGTCCTTTGGGAGACAAATCCATGTGTGGTGGAAGCGATAGGTCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CAA 90 bp GTAGACACGCAAGGCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCAGCCCTGGGGGACCATaGCTGGGGTTCGCCACCGCC +
Preference number: 5 (lower is better)
Translates to: VDTQGKASKDKQGCWQSCSPGGP*LGFATA
Trigger: GGCGGTGGCGAACCCCAGCAATGGTCCCCCAGGGCT...GCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGCCTTGCGTGTCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CAA 90 bp AAGCCGTGGCATCGGCAGCATCCTATCATGCTCATCCGGAACCTAGAAGTTTCCCGTCCGTGCACCTCCTaGCCCTGCAGGTTGCTAAGG +
Preference number: 5 (lower is better)
Translates to: KPWHRQHPIMLIRNLEVSRPCTS*PCRLLR
Trigger: CCTTAGCAACCTGCAGGGCAAGGAGGTGCACGGACG...GGAAACTTCTAGGTTCCGGATGAGCATGATAGGATGCTGCCGATGCCACGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS CCA 90 bp CTGCAGATAAAGGGCTTATGCTGTCCTCCAAAGACAGCTGGGGTGTaGGCAGCTTCAGTTCCAGCTGCTTCTCAGCCTCACAGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: LQIKGLCCPPKTAGV*AASVPAASQPHSPG
Trigger: CCCTGGACTGTGAGGCTGAGAAGCAGCTGGAACTGAAGCTGCCCACACCCCAGCTGTCTTTGGAGGACAGCATAAGCCCTTTATCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 90 bp GTAGCTGAGCTGCTGGTACCATGCTCCCGCACTTCCTTCCTTCTCTaGCTTCTTCCTCAGAGAACAAGGGTGCCAATAAGGCGGCGCTGT +
Preference number: 5 (lower is better)
Translates to: VAELLVPCSRTSFLL*LLPQRTRVPIRRRC
Trigger: ACAGCGCCGCCTTATTGGCACCCTTGTTCTCTGAGGAAGAAGCCAGAGAAGGAAGGAAGTGCGGGAGCATGGTACCAGCAGCTCAGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045717.7
CDS-3UTR CAA 90 bp CCTATCGCTTCCACCACACATGGATTTGTCTCCCAAAGGACAACTTCCAGGGGTGAGACAGCGGTGCCATaGGAGACCCCAGGCCTAGCT +
Preference number: 5 (lower is better)
Translates to: PIASTTHGFVSQRTTSRGETAVP*ETPGLA
Trigger: AGCTAGGCCTGGGGTCTCCAATGGCACCGCTGTCTC...ACCCCTGGAAGTTGTCCTTTGGGAGACAAATCCATGTGTGGTGGAAGCGATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS TCA 90 bp TCAGCTGACACCAGAAGGAGCCAGGGTTTTCGATGTGAGACACCTTaGCTTCAACGGTGCTGCCCACCTCCAGTTCCCCTTTACCACAGC +
Preference number: 5 (lower is better)
Translates to: SADTRRSQGFRCETP*LQRCCPPPVPLYHS
Trigger: GCTGTGGTAAAGGGGAACTGGAGGTGGGCAGCACCGTTGAAGTCAAGGTGTCTCACATCGAAAACCCTGGCTCCTTCTGGTGTCAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp AGCATGGAAATGCTTGCATGGGGACCAGCAGAAGCTCAGAAGGGATaGTCCAAAGCTCCTTGGCGTCCACACAGTCCTCCGCATTCCCAA +
Preference number: 5 (lower is better)
Translates to: SMEMLAWGPAEAQKG*SKAPWRPHSPPHSQ
Trigger: TTGGGAATGCGGAGGACTGTGTGGACGCCAAGGAGCTTTGGAGCATCCCTTCTGAGCTTCTGCTGGTCCCCATGCAAGCATTTCCATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp CTGTCCTCCAAAGACAGCTGGGGTGTGGGCAGCTTCAGTTCCAGCTaGTTCTCAGCCTCACAGTCCAGGGGAAGTTGCATCATGAATGAC +
Preference number: 5 (lower is better)
Translates to: LSSKDSWGVGSFSSS*FSASQSRGSCIMND
Trigger: GTCATTCATGATGCAACTTCCCCTGGACTGTGAGGCTGAGAAGCAGCTGGAACTGAAGCTGCCCACACCCCAGCTGTCTTTGGAGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 90 bp CTGACAGCTGCAGATAAAGGGCTTATGCTGTCCTCCAAAGACAGCTaGGGTGTGGGCAGCTTCAGTTCCAGCTGCTTCTCAGCCTCACAG +
Preference number: 5 (lower is better)
Translates to: LTAADKGLMLSSKDS*GVGSFSSSCFSASQ
Trigger: CTGTGAGGCTGAGAAGCAGCTGGAACTGAAGCTGCCCACACCCCAGCTGTCTTTGGAGGACAGCATAAGCCCTTTATCTGCAGCTGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 90 bp TCTGTAGCTGAGCTGGTACCATGCTCCCGCACTTCCTTCCTTCTCTaGCTTCTTCCTCAGAGAACAAGGGTGCCAATAAGGCGGCGCTGT +
Preference number: 5 (lower is better)
Translates to: SVAELVPCSRTSFLL*LLPQRTRVPIRRRC
Trigger: ACAGCGCCGCCTTATTGGCACCCTTGTTCTCTGAGGAAGAAGCCAGAGAAGGAAGGAAGTGCGGGAGCATGGTACCAGCTCAGCTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp GAGAACAAGGGTGCCAATAAGGCGGCGCTGTCTCTACTTTCAAACTaGGGAAACTCCTCTTCAGACAGGTTCCTTCCACCGTGTGCCGGT +
Preference number: 5 (lower is better)
Translates to: ENKGANKAALSLLSN*GNSSSDRFLPPCAG
Trigger: ACCGGCACACGGTGGAAGGAACCTGTCTGAAGAGGAGTTTCCGCAGTTTGAAAGTAGAGACAGCGCCGCCTTATTGGCACCCTTGTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp ACACGACGCATTTCGATCCGACAGAGAAGCCTTTCAGAGTGTAGGTaGTCTGTAGCTGAGCTGCTGGTACCATGCTCCCGCACTTCCTTC +
Preference number: 5 (lower is better)
Translates to: TRRISIRQRSLSECR*SVAELLVPCSRTSF
Trigger: GAAGGAAGTGCGGGAGCATGGTACCAGCAGCTCAGCTACAGAGCACCTACACTCTGAAAGGCTTCTCTGTCGGATCGAAATGCGTCGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045717.7
CDS-3UTR CAA 90 bp CAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGGCATCGGCAGCATCCTGTGGGGATGGCATACTaGGGTTACTACCACCGGCTC +
Preference number: 5 (lower is better)
Translates to: QTRLLAILLTKPWHRQHPVGMAY*GYYHRL
Trigger: GAGCCGGTGGTAGTAACCCAAGTATGCCATCCCCAC...AGGATGCTGCCGATGCCACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS TCA 90 bp TCACGAACTCCACCTGGGCGTCATAGAAGGTGTTCATCTTCAGCCTaGTGGATCTCAAGGAGGGGAGGGAAACTTCCGCCTCCATTTCCT +
Preference number: 5 (lower is better)
Translates to: SRTPPGRHRRCSSSA*WISRRGGKLPPPFP
Trigger: AGGAAATGGAGGCGGAAGTTTCCCTCCCCTCCTTGAGATCCATCAGGCTGAAGATGAACACCTTCTATGACGCCCAGGTGGAGTTCGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 90 bp GCTCGCTGCTTTTGCAATAGTCCTCGATGTCACACATCAAGGTTCTaGAGCCTTGCGCGTTCCTCATCAGCTGACACCAGAAGGAGCCAG +
Preference number: 5 (lower is better)
Translates to: ARCFCNSPRCHTSRF*SLARSSSADTRRSQ
Trigger: CTGGCTCCTTCTGGTGTCAGCTGATGAGGAACGCGCAAGGCTTCAGAACCTTGATGTGTGACATCGAGGACTATTGCAAAAGCAGCGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp CATAAGTTATCCTCTGGGAAAACGGCACATATCACATCTCCGCTCTaGCACTGCGGACCTGTGTGGTACTGGGGCCGTGTTCTGACATCA +
Preference number: 5 (lower is better)
Translates to: HKLSSGKTAHITSPL*HCGPVWYWGRVLTS
Trigger: TGATGTCAGAACACGGCCCCAGTACCACACAGGTCCGCAGTGGCAGAGCGGAGATGTGATATGTGCCGTTTTCCCAGAGGATAACTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp CGAGAGCTCGCTTGCCCGGGCTTCCCCGTAGAATGTCTTATCTTGTaGTATTTTATGACTTGGCTTCTTGAGGCCAAGGTCAGGACTGGC +
Preference number: 5 (lower is better)
Translates to: RELACPGFPVECLIL*YFMTWLLEAKVRTG
Trigger: GCCAGTCCTGACCTTGGCCTCAAGAAGCCAAGTCATAAAATAGCACAAGATAAGACATTCTACGGGGAAGCCCGGGCAAGCGAGCTCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp ACACGACGCATTTCGATCCGACAGAGAAGCCTTTCAGAGTGTAGGTaGTCTGTAGCTGAGCTGGTACCATGCTCCCGCACTTCCTTCCTT +
Preference number: 5 (lower is better)
Translates to: TRRISIRQRSLSECR*SVAELVPCSRTSFL
Trigger: AAGGAAGGAAGTGCGGGAGCATGGTACCAGCTCAGCTACAGAGCACCTACACTCTGAAAGGCTTCTCTGTCGGATCGAAATGCGTCGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 90 bp GGATGTGATGAGGGATGTCCGATAAGGAGCATTTCAAGGCTTGCATaGGCAGAAGTAAGACATCATGGGCATCTCGGGGGATGGGGAGCA +
Preference number: 5 (lower is better)
Translates to: GCDEGCPIRSISRLA*AEVRHHGHLGGWGA
Trigger: TGCTCCCCATCCCCCGAGATGCCCATGATGTCTTACTTCTGCCCATGCAAGCCTTGAAATGCTCCTTATCGGACATCCCTCATCACATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 90 bp CCGGCCTTTCTCTCATCCTCCGAATACCTGGATTCCTGGATGTCCTaGCTGACAGCTGCAGATAAAGGGCTTATGCTGTCCTCCAAAGAC +
Preference number: 5 (lower is better)
Translates to: PAFLSSSEYLDSWMS*LTAADKGLMLSSKD
Trigger: GTCTTTGGAGGACAGCATAAGCCCTTTATCTGCAGCTGTCAGCCAGGACATCCAGGAATCCAGGTATTCGGAGGATGAGAGAAAGGCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS-3UTR CAA 90 bp GTAGACACGCAAGGCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCCATGGAGATCCCGGTTaGTCAGGGCTCTCCTCCCTC +
Preference number: 5 (lower is better)
Translates to: VDTQGKASKDKQGCWQSCHGDPG*SGLSSL
Trigger: GAGGGAGGAGAGCCCTGACAAACCGGGATCTCCATG...GCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGCCTTGCGTGTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS TCA 90 bp CATTGGGTGCAGCTTCTTCTGTCAGAGAGCTGCTTGCCAGCACTTTaGACCTCCGTTTCCAGATACTGCAGCTTCTCGGAATCGGCAAAC +
Preference number: 5 (lower is better)
Translates to: HWVQLLLSESCLPAL*TSVSRYCSFSESAN
Trigger: GTTTGCCGATTCCGAGAAGCTGCAGTATCTGGAAACGGAGGTTCAAAGTGCTGGCAAGCAGCTCTCTGACAGAAGAAGCTGCACCCAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp CCACAGGCATTCGAAAATACTCCGGCAGCAGATAGCGGAGGCTGCTaGAGCTTACTAGTTCTTTCCTTCCGTAATCGACGTGAAGCACCT +
Preference number: 5 (lower is better)
Translates to: PQAFENTPAADSGGC*SLLVLSFRNRREAP
Trigger: AGGTGCTTCACGTCGATTACGGAAGGAAAGAACTAGTAAGCTGCAGCAGCCTCCGCTATCTGCTGCCGGAGTATTTTCGAATGCCTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp TTATCCTCTGGGAAAACGGCACATATCACATCTCCGCTCTGCCACTaGGGACCTGTGTGGTACTGGGGCCGTGTTCTGACATCATTTAGT +
Preference number: 5 (lower is better)
Translates to: LSSGKTAHITSPLCH*GPVWYWGRVLTSFS
Trigger: ACTAAATGATGTCAGAACACGGCCCCAGTACCACACAGGTCCGCAGTGGCAGAGCGGAGATGTGATATGTGCCGTTTTCCCAGAGGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 90 bp TGTTCGCTTTGCCAGACAAACACGAGTGTCCCCCTCGTAGGGAGATaGCTCGCTGCTTTTGCAATAGTCCTCGATGTCACACATCAAGGT +
Preference number: 5 (lower is better)
Translates to: CSLCQTNTSVPLVGR*LAAFAIVLDVTHQG
Trigger: ACCTTGATGTGTGACATCGAGGACTATTGCAAAAGCAGCGAGCCATCTCCCTACGAGGGGGACACTCGTGTTTGTCTGGCAAAGCGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 90 bp CCCGGTCCACCAGGAACACATCCACACTCTTGCTGTCTAATCGGGTaGCCGTGGCTCGGTAATAGCCATTTTCTTTCCATTTTACACAGC +
Preference number: 5 (lower is better)
Translates to: PGPPGTHPHSCCLIG*PWLGNSHFLSILHS
Trigger: GCTGTGTAAAATGGAAAGAAAATGGCTATTACCGAGCCACGGTCACCCGATTAGACAGCAAGAGTGTGGATGTGTTCCTGGTGGACCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
CDS TCA 90 bp CCCCTTTACCACAGCAGTCTGGTTTGGTTTTCAAGAAGTTCAGCATaGGGAGAGATGGGTCCGACGTTACCTTCTCTGTGTCCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: PLYHSSLVWFSRSSA*GEMGPTLPSLCPVQ
Trigger: CTGCACAGGACACAGAGAAGGTAACGTCGGACCCATCTCTCCTCATGCTGAACTTCTTGAAAACCAAACCAGACTGCTGTGGTAAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 90 bp AAAAACGGCAGGCGCTCTGAAAGGGCGTCAGCAAGTCCACAACATTaGACCACTCTTCCTCATGCCTTGATGCCAAAGCAAACACTGTGC +
Preference number: 5 (lower is better)
Translates to: KNGRRSERASASPQH*TTLPHALMPKQTLC
Trigger: GCACAGTGTTTGCTTTGGCATCAAGGCATGAGGAAGAGTGGTTCAATGTTGTGGACTTGCTGACGCCCTTTCAGAGCGCCTGCCGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 90 bp CCCCGTAGAATGTCTTATCTTGTGCTATTTTATGACTTGGCTTCTTaGGGCCAAGGTCAGGACTGGCGAGGCTTCCCTTTCTCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: PRRMSYLVLFYDLAS*GQGQDWRGFPFSLG
Trigger: GCCCAGAGAGAAAGGGAAGCCTCGCCAGTCCTGACCTTGGCCTCAAGAAGCCAAGTCATAAAATAGCACAAGATAAGACATTCTACGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 90 bp CCTTTCTCTCATCCTCCGAATACCTGGATTCCTGGATGTCCTGGCTaGCAGCTGCAGATAAAGGGCTTATGCTGTCCTCCAAAGACAGCT +
Preference number: 5 (lower is better)
Translates to: PFSHPPNTWIPGCPG*QLQIKGLCCPPKTA
Trigger: AGCTGTCTTTGGAGGACAGCATAAGCCCTTTATCTGCAGCTGTCAGCCAGGACATCCAGGAATCCAGGTATTCGGAGGATGAGAGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp TCACCACAGGCATTCGAAAATACTCCGGCAGCAGATAGCGGAGGCTaGTGCAGCTTACTAGTTCTTTCCTTCCGTAATCGACGTGAAGCA +
Preference number: 5 (lower is better)
Translates to: SPQAFENTPAADSGG*CSLLVLSFRNRREA
Trigger: TGCTTCACGTCGATTACGGAAGGAAAGAACTAGTAAGCTGCAGCAGCCTCCGCTATCTGCTGCCGGAGTATTTTCGAATGCCTGTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp GAGGCAACAACATTCTCACATCACACCAGTCCACATTCTCAGAGTTaGCCCGGTCCACCAGGAACACATCCACACTCTTGCTGTCTAATC +
Preference number: 5 (lower is better)
Translates to: EATTFSHHTSPHSQS*PGPPGTHPHSCCLI
Trigger: GATTAGACAGCAAGAGTGTGGATGTGTTCCTGGTGGACCGGGGCAACTCTGAGAATGTGGACTGGTGTGATGTGAGAATGTTGTTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
CDS GCA 90 bp CAATTTGTGGACATTGGGTGCAGCTTCTTCTGTCAGAGAGCTGCTTaGCAGCACTTTGAACCTCCGTTTCCAGATACTGCAGCTTCTCGG +
Preference number: 5 (lower is better)
Translates to: QFVDIGCSFFCQRAA*QHFEPPFPDTAASR
Trigger: CCGAGAAGCTGCAGTATCTGGAAACGGAGGTTCAAAGTGCTGGCAAGCAGCTCTCTGACAGAAGAAGCTGCACCCAATGTCCACAAATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp CTCTGTACCTCACGATGCACGGATCTCCAATTTGTGGACATTGGGTaGAGCTTCTTCTGTCAGAGAGCTGCTTGCCAGCACTTTGAACCT +
Preference number: 5 (lower is better)
Translates to: LCTSRCTDLQFVDIG*SFFCQRAACQHFEP
Trigger: AGGTTCAAAGTGCTGGCAAGCAGCTCTCTGACAGAAGAAGCTGCACCCAATGTCCACAAATTGGAGATCCGTGCATCGTGAGGTACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 90 bp AGGCTTGCATGGGCAGAAGTAAGACATCATGGGCATCTCGGGGGATaGGGAGCAGATGATCGACTGCTATGTACGTGTTCCCAAAATCAA +
Preference number: 5 (lower is better)
Translates to: RLAWAEVRHHGHLGG*GADDRLLCTCSQNQ
Trigger: TTGATTTTGGGAACACGTACATAGCAGTCGATCATCTGCTCCCCATCCCCCGAGATGCCCATGATGTCTTACTTCTGCCCATGCAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 90 bp CCGGGCTTCCCCGTAGAATGTCTTATCTTGTGCTATTTTATGACTTaGCTTCTTGAGGCCAAGGTCAGGACTGGCGAGGCTTCCCTTTCT +
Preference number: 5 (lower is better)
Translates to: PGFPVECLILCYFMT*LLEAKVRTGEASLS
Trigger: AGAAAGGGAAGCCTCGCCAGTCCTGACCTTGGCCTCAAGAAGCCAAGTCATAAAATAGCACAAGATAAGACATTCTACGGGGAAGCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS-3UTR CAA 90 bp AAGCCGTGGCATCGGCAGCATCCTATCATGCTCATCCGGAACCTAGAAGTTTCCCACTCCCAGCTGCAGTaGGGGATAAAAGTAATCCAA +
Preference number: 5 (lower is better)
Translates to: KPWHRQHPIMLIRNLEVSHSQLQ*GIKVIQ
Trigger: TTGGATTACTTTTATCCCCAACTGCAGCTGGGAGTG...GGAAACTTCTAGGTTCCGGATGAGCATGATAGGATGCTGCCGATGCCACGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CAA 90 bp CCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTTCCACATTCTCAGAGTaGCCCCGGTCCACCAGGAAC +
Preference number: 5 (lower is better)
Translates to: PKGQLPGVKCFNISSSTFSTFSE*PRSTRN
Trigger: GTTCCTGGTGGACCGGGGCAACTCTGAGAATGTGGA...AAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CAA 90 bp CTGAGAAGAAACACGAGAAGGCTTTGGACTGGGGACCAAAGCCAGATGCCGCTATTGCATTCATCGTCATaGTCAGCAGAGAGTGGTACC +
Preference number: 5 (lower is better)
Translates to: LRRNTRRLWTGDQSQMPLLHSSS*SAESGT
Trigger: GGTACCACTCTCTGCTGACAATGACGATGAATGCAA...TAGCGGCATCTGGCTTTGGTCCCCAGTCCAAAGCCTTCTCGTGTTTCTTCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS TCA 90 bp TCAGCCAGGGTGCACTTCAGAGCCAGTATCGGTAGCTGTCTAAACTaGGGCAACAACATTCTCACATCACACCAGTCCACATTCTCAGAG +
Preference number: 5 (lower is better)
Translates to: SARVHFRASIGSCLN*GNNILTSHQSTFSE
Trigger: CTCTGAGAATGTGGACTGGTGTGATGTGAGAATGTTGTTGCCTCAGTTTAGACAGCTACCGATACTGGCTCTGAAGTGCACCCTGGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
CDS TCA 90 bp TGGGTCCGACGTTACCTTCTCTGTGTCCTGTGCAGTAGAAAGGTTTaGAAGGCTGACCGTGTCCGCCAAAGCTTTGGCAGAAGAATAGAA +
Preference number: 5 (lower is better)
Translates to: WVRRYLLCVLCSRKV*KADRVRQSFGRRIE
Trigger: TTCTATTCTTCTGCCAAAGCTTTGGCGGACACGGTCAGCCTTTCAAACCTTTCTACTGCACAGGACACAGAGAAGGTAACGTCGGACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233077.2
CDS-3UTR CAA 90 bp TCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGCGCTTGCTGTTCGCTTaGCCAGACAAACACGAGTGT +
Preference number: 5 (lower is better)
Translates to: SPKGQLPGVKCFNISSSTRLLFA*PDKHEC
Trigger: ACACTCGTGTTTGTCTGGCAAAGCGAACAGCAAGCG...CGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CAA 90 bp CAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGGCATCGGCAGCATCCTACTCTTCCTCATGCCTaGATGCCAAAGCAAACACTG +
Preference number: 5 (lower is better)
Translates to: QTRLLAILLTKPWHRQHPTLPHA*MPKQTL
Trigger: CAGTGTTTGCTTTGGCATCAAGGCATGAGGAAGAGT...AGGATGCTGCCGATGCCACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CAA 90 bp CTGAGAAGAAACACGAGAAGGCTTTGGACTGGGGACCAAAGCCAGATGCCGCTATCTCCTCCACACCATTaGAAAGGTTCAAAACCCTTG +
Preference number: 5 (lower is better)
Translates to: LRRNTRRLWTGDQSQMPLSPPHH*KGSKPL
Trigger: CAAGGGTTTTGAACCTTTCAAATGGTGTGGAGGAGA...TAGCGGCATCTGGCTTTGGTCCCCAGTCCAAAGCCTTCTCGTGTTTCTTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS GCA 90 bp GTTATTCTGCCGAGCGCTATCGATGAACCCGCTGAAAGCCTGTACTaGCTTTTCATCCCAGACAAAGGGATTTTCACCCATCGGTTGAAT +
Preference number: 5 (lower is better)
Translates to: VILPSAIDEPAESLY*LFIPDKGIFTHRLN
Trigger: ATTCAACCGATGGGTGAAAATCCCTTTGTCTGGGATGAAAAGGCAGTACAGGCTTTCAGCGGGTTCATCGATAGCGCTCGGCAGAATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 90 bp TTCCCACTGTTTGGAATACAGCCTCAGAAGGTCTCTTATCTACCTTaGGAATCCCATTCCAGACATTCTCGGGGCTTACTGTCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: FPLFGIQPQKVSYLP*ESHSRHSRGLLSPP
Trigger: TGGAGGAGACAGTAAGCCCCGAGAATGTCTGGAATGGGATTCCCAAGGTAGATAAGAGACCTTCTGAGGCTGTATTCCAAACAGTGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS-3UTR CAA 90 bp TCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGAACACATCCACACTCTaGCTGTCTAATCGGGTGACC +
Preference number: 5 (lower is better)
Translates to: SPKGQLPGVKCFNISSSTNTSTL*LSNRVT
Trigger: GGTCACCCGATTAGACAGCAAGAGTGTGGATGTGTT...CGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CAA 90 bp CCTATCGCTTCCACCACACATGGATTTGTCTCCCAAAGGACAACTTCCAGGGGTGATACTGGCATTGATTaGGACACTGTCGTCATACAG +
Preference number: 5 (lower is better)
Translates to: PIASTTHGFVSQRTTSRGDTGID*DTVVIQ
Trigger: CTGTATGACGACAGTGTCCAAATCAATGCCAGTATC...ACCCCTGGAAGTTGTCCTTTGGGAGACAAATCCATGTGTGGTGGAAGCGATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CAA 90 bp CCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTGTTCTGGGTAGCACCGGACCCATCTTGGGTTaGCAAGATTCACCCATAATC +
Preference number: 5 (lower is better)
Translates to: PGVKCFNISSSTFVLGSTGPILG*QDSPII
Trigger: GATTATGGGTGAATCTTGCAAACCCAAGATGGGTCC...GGTGCTACCCAGAACAAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CAA 90 bp TGTCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCAACAGAGAGAAGGCCATaGGGCTGCTGTTCCATGACA +
Preference number: 5 (lower is better)
Translates to: CLPKDNFQGSNALTFPPATERRP*GCCSMT
Trigger: TGTCATGGAACAGCAGCCCAATGGCCTTCTCTCTGT...TGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS GCA 90 bp GCTCTGAAGAAACCAGTCAGCCAGGCAACAGGATTGTACTCCGAATaGACTGTTGAGATTAATCCCATCTTCCCCATACAGGGTGACATA +
Preference number: 5 (lower is better)
Translates to: ALKKPVSQATGLYSE*TVEINPIFPIQGDI
Trigger: TATGTCACCCTGTATGGGGAAGATGGGATTAATCTCAACAGTGCATTCGGAGTACAATCCTGTTGCCTGGCTGACTGGTTTCTTCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp CTTCTTTCTTCTCCCTTGTTAATGGAAACCCTCCATCATTTTTGTTaGCCACTGAGTCCTGATACGGTGGGACTAGGTTGGCCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: LLSSPLLMETLHHFC*PLSPDTVGLGWPLL
Trigger: CAGCAAAGGCCAACCTAGTCCCACCGTATCAGGACTCAGTGGGCAACAAAAATGATGGAGGGTTTCCATTAACAAGGGAGAAGAAAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 90 bp ACAGCAGTCTGGTTTGGTTTTCAAGAAGTTCAGCATGAGGAGAGATaGGTCCGACGTTACCTTCTCTGTGTCCTGTGCAGTAGAAAGGTT +
Preference number: 5 (lower is better)
Translates to: TAVWFGFQEVQHEER*VRRYLLCVLCSRKV
Trigger: AACCTTTCTACTGCACAGGACACAGAGAAGGTAACGTCGGACCCATCTCTCCTCATGCTGAACTTCTTGAAAACCAAACCAGACTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 90 bp GGGTTACGTACACCAGTTCTTCACTTCCGATTTTTAGGTCATGGGTaGAATAGTAGTAAGAGTGTAGCTGAACGGAAGGTTCCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: GLRTPVLHFRFLGHG*NSSKSVAERKVPGA
Trigger: AGCCCCTGGAACCTTCCGTTCAGCTACACTCTTACTACTATTCCACCCATGACCTAAAAATCGGAAGTGAAGAACTGGTGTACGTAACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS-3UTR CAA 90 bp CTGAGAAGAAACACGAGAAGGCTTTGGACTGGGGACCAAAGCCAGATGCCGCTAGATCTCTATGACATATaGGTGATCCTGCTTATCAAG +
Preference number: 5 (lower is better)
Translates to: LRRNTRRLWTGDQSQMPLDLYDI*VILLIK
Trigger: CTTGATAAGCAGGATCACCAATATGTCATAGAGATC...TAGCGGCATCTGGCTTTGGTCCCCAGTCCAAAGCCTTCTCGTGTTTCTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CAA 90 bp AAGCCGTGGCATCGGCAGCATCCTATCATGCTCATCCGGAACCTAGAAGTTTCCGTTTTATTATCTTTTTaGGCTCTCTGGTCTCCTTCG +
Preference number: 5 (lower is better)
Translates to: KPWHRQHPIMLIRNLEVSVLLSF*ALWSPS
Trigger: CGAAGGAGACCAGAGAGCCAAAAAAGATAATAAAAC...GGAAACTTCTAGGTTCCGGATGAGCATGATAGGATGCTGCCGATGCCACGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CAA 90 bp CCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTCTCCCATCTGGGTCTTaGGCTACAACTAAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: PKGQLPGVKCFNISSSTFLPSGS*ATTKAF
Trigger: GAAGGCTTTAGTTGTAGCCAAAGACCCAGATGGGAG...AAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CAA 90 bp CCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTGGGACTAGGTTGGCCTTaGCTGAGCCCTGTAAATATC +
Preference number: 5 (lower is better)
Translates to: PKDNFQGSNALTFPPARLGLGWP*LSPVNI
Trigger: GATATTTACAGGGCTCAGCAAAGGCCAACCTAGTCC...CAAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CAA 90 bp GATTTGTCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCGGGAATTCACAAAACTaGGGAGGCAGATCTCTGCCG +
Preference number: 5 (lower is better)
Translates to: DLSPKGQLPGVKCFNISSGNSQN*GGRSLP
Trigger: CGGCAGAGATCTGCCTCCCAAGTTTTGTGAATTCCC...GGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGACAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CAA 90 bp CTGAGAAGAAACACGAGAAGGCTTTGGACTGGGGACCAAAGCCAGATGCCGCTAAGGCTTTTATCAGTTTaGCTTTGGGGTTATACCAGT +
Preference number: 5 (lower is better)
Translates to: LRRNTRRLWTGDQSQMPLRLLSV*LWGYTS
Trigger: ACTGGTATAACCCCAAAGCAAAACTGATAAAAGCCT...TAGCGGCATCTGGCTTTGGTCCCCAGTCCAAAGCCTTCTCGTGTTTCTTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CAA 90 bp GTAGACACGCAAGGCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCTCCAATTTGTGGACATaGGGTGCAGCTTCTTCTGTC +
Preference number: 5 (lower is better)
Translates to: VDTQGKASKDKQGCWQSCSNLWT*GAASSV
Trigger: GACAGAAGAAGCTGCACCCAATGTCCACAAATTGGA...GCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGCCTTGCGTGTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CAA 90 bp CCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTGTCCTTTCCCACTGTTaGGAATACAGCCTCAGAAGG +
Preference number: 5 (lower is better)
Translates to: PKGQLPGVKCFNISSSTFVLSHC*EYSLRR
Trigger: CCTTCTGAGGCTGTATTCCAAACAGTGGGAAAGGAC...AAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS TCA 90 bp CTTGTTAATGGAAACCCTCCATCATTTTTGTTGCCCACTGAGTCCTaGTACGGTGGGACTAGGTTGGCCTTTGCTGAGCCCTGTAAATAT +
Preference number: 5 (lower is better)
Translates to: LVNGNPPSFLLPTES*YGGTRLAFAEPCKY
Trigger: ATATTTACAGGGCTCAGCAAAGGCCAACCTAGTCCCACCGTATCAGGACTCAGTGGGCAACAAAAATGATGGAGGGTTTCCATTAACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 90 bp CCATTGCATGGAAACCTGCTAATCATATCTTCAGCTATGACTCCGTaGTCATCTGCGAGGATCACTTCCCAGGTGCCTTGGAATTTAACA +
Preference number: 5 (lower is better)
Translates to: PLHGNLLIISSAMTP*SSARITSQVPWNLT
Trigger: TGTTAAATTCCAAGGCACCTGGGAAGTGATCCTCGCAGATGAGCACGGAGTCATAGCTGAAGATATGATTAGCAGGTTTCCATGCAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 90 bp TCTCAGGAAGAGCAGAGTCTAGTTTGGTGCCACTCATGGGTGAGCTaGCAAATATGTCTTCTTTCTTCTCCCTTGTTAATGGAAACCCTC +
Preference number: 5 (lower is better)
Translates to: SQEEQSLVWCHSWVS*QICLLSSPLLMETL
Trigger: GAGGGTTTCCATTAACAAGGGAGAAGAAAGAAGACATATTTGCCAGCTCACCCATGAGTGGCACCAAACTAGACTCTGCTCTTCCTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS-3UTR CAA 90 bp GTAGACACGCAAGGCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCACTCCGAATGCACTGTaGAGATTAATCCCATCTTCC +
Preference number: 5 (lower is better)
Translates to: VDTQGKASKDKQGCWQSCTPNAL*RLIPSS
Trigger: GGAAGATGGGATTAATCTCAACAGTGCATTCGGAGT...GCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGCCTTGCGTGTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS GCA 90 bp AGCTATCTTCAAACAGTCCCCTTTCATGGTCTGGGTGGTAAGCCCTaGTTGAGAGTTTCCATTGCATGGAAACCTGCTAATCATATCTTC +
Preference number: 5 (lower is better)
Translates to: SYLQTVPFHGLGGKP*LRVSIAWKPANHIF
Trigger: GAAGATATGATTAGCAGGTTTCCATGCAATGGAAACTCTCAAGCAGGGCTTACCACCCAGACCATGAAAGGGGACTGTTTGAAGATAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 90 bp CCATTCTTCTCTCAGGAAGAGCAGAGTCTAGTTTGGTGCCACTCATaGGTGAGCTGGCAAATATGTCTTCTTTCTTCTCCCTTGTTAATG +
Preference number: 5 (lower is better)
Translates to: PFFSQEEQSLVWCHS*VSWQICLLSSPLLM
Trigger: CATTAACAAGGGAGAAGAAAGAAGACATATTTGCCAGCTCACCCATGAGTGGCACCAAACTAGACTCTGCTCTTCCTGAGAGAAGAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS-3UTR CAA 90 bp GATTTGTCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCAAGTCCACAACATaGAACCACTCTTCCTCATGC +
Preference number: 5 (lower is better)
Translates to: DLSPKGQLPGVKCFNISSSKSTT*NHSSSC
Trigger: GCATGAGGAAGAGTGGTTCAATGTTGTGGACTTGCT...GGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGACAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CAA 90 bp CCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTGGTTGTTCTAAAACGTTaGTATTTCTCGCGAGCTGGC +
Preference number: 5 (lower is better)
Translates to: PKDNFQGSNALTFPPARLVVLKR*YFSRAG
Trigger: GCCAGCTCGCGAGAAATACAAACGTTTTAGAACAAC...CAAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CAA 90 bp GTAGACACGCAAGGCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCCTTCTTTCTTCTCCCTaGTTAATGGAAACCCTCCAT +
Preference number: 5 (lower is better)
Translates to: VDTQGKASKDKQGCWQSCLLSSP*LMETLH
Trigger: ATGGAGGGTTTCCATTAACAAGGGAGAAGAAAGAAG...GCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGCCTTGCGTGTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS TCA 90 bp TCCTCCCCCATTCTGGATTCATCCAGGATCTCTATGACATATTGGTaGTCCTGCTTATCAAGAACATGGACCACCAATTCTTTGTGGAGT +
Preference number: 5 (lower is better)
Translates to: SSPILDSSRISMTYW*SCLSRTWTTNSLWS
Trigger: ACTCCACAAAGAATTGGTGGTCCATGTTCTTGATAAGCAGGATCACCAATATGTCATAGAGATCCTGGATGAATCCAGAATGGGGGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
CDS GCA 90 bp CTTGATGCCAAAGCAAACACTGTGCATTTTAATTCTAAGTTATTCTaGCGAGCGCTATCGATGAACCCGCTGAAAGCCTGTACTGCCTTT +
Preference number: 5 (lower is better)
Translates to: LDAKANTVHFNSKLF*RALSMNPLKACTAF
Trigger: AAAGGCAGTACAGGCTTTCAGCGGGTTCATCGATAGCGCTCGGCAGAATAACTTAGAATTAAAATGCACAGTGTTTGCTTTGGCATCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS-3UTR CAA 90 bp TGTCTCCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACACTTCCCAGGTGCCTaGGAATTTAACAAATTCACA +
Preference number: 5 (lower is better)
Translates to: CLPKDNFQGSNALTFPPAHFPGA*EFNKFT
Trigger: TGTGAATTTGTTAAATTCCAAGGCACCTGGGAAGTG...TGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGGAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CAA 90 bp GCAAAGCGTCAAAAGACAAACAAGGTTGCTGGCAATCTTGCTAACAAAGCCGTGAGTCTGATGTTTTCTTaGGTTTCAAACTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: AKRQKTNKVAGNLANKAVSLMFS*VSNSWN
Trigger: GTTCCAGGAGTTTGAAACCAAAGAAAACATCAGACT...CACGGCTTTGTTAGCAAGATTGCCAGCAACCTTGTTTGTCTTTTGACGCTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS-3UTR CAA 90 bp CCCAAAGGACAACTTCCAGGGGTCAAATGCTTTAACATTTCCTCCAGCACGTTTAGGAGCTATTGTCTTTaGTGGGAATTCACAAAACTT +
Preference number: 5 (lower is better)
Translates to: PKGQLPGVKCFNISSSTFRSYCL*WEFTKL
Trigger: AAGTTTTGTGAATTCCCACAAAAGACAATAGCTCCT...AAACGTGCTGGAGGAAATGTTAAAGCATTTGACCCCTGGAAGTTGTCCTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS TCA 90 bp CCAAGGTGGATGCTTTTAGATTCAGTAAGGCTTTACTTAGCTGCATaGTGTTGTACGACAGTTGTTCTAAAACGTTTGTATTTCTCGCGA +
Preference number: 5 (lower is better)
Translates to: PRWMLLDSVRLYLAA*CCTTVVLKRLYFSR
Trigger: TCGCGAGAAATACAAACGTTTTAGAACAACTGTCGTACAACATCATGCAGCTAAGTAAAGCCTTACTGAATCTAAAAGCATCCACCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS-3UTR CAA 90 bp ATAAACTTTATTCAAATGTTGGGTTGCATTTGTTGCACTCCAGGTTCAAACAGACTTGGCAAAGCCAGCTaGAGCGATGACCTTACTAAT +
Preference number: 5 (lower is better)
Translates to: INFIQMLGCICCTPGSNRLGKAS*SDDLTN
Trigger: ATTAGTAAGGTCATCGCTCAAGCTGGCTTTGCCAAG...TCTGTTTGAACCTGGAGTGCAACAAATGCAACCCAACATTTGAATAAAGTTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000168073.9
CDS TCA 90 bp GTTGTTGATCTCAGCTTCATCTTCTATCAGCTGGATGTAAAAATCTaGAAGGTCGTTAATATGAGAAACATACACAGAGGTCTTAAAGCC +
Preference number: 5 (lower is better)
Translates to: VVDLSFIFYQLDVKI*KVVNMRNIHRGLKA
Trigger: GGCTTTAAGACCTCTGTGTATGTTTCTCATATTAACGACCTTTCAGATTTTTACATCCAGCTGATAGAAGATGAAGCTGAGATCAACAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp GAGCCCCACCTGCACCAGGCACAGCTCTCCCGGCGATaGCGACGCCCCACCCAGCGCCCAGGGACCGCGCGT +
Preference number: 6 (lower is better)
Translates to: EPHLHQAQLSRR*RRPTQRPGTAR
Trigger: ACGCGCGGTCCCTGGGCGCTGGGTGGGGCGTCGGCATCGCCGGGAGAGCTGTGCCTGGTGCAGGTGGGGCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp CCCTGGGGGACCATTGCTGGGGTTCGCCACCGCCAGTaGCACCACCGCCCGCGGGCACCAGCCCTGCTAGCA +
Preference number: 6 (lower is better)
Translates to: PWGTIAGVRHRQ*HHRPRAPALLA
Trigger: TGCTAGCAGGGCTGGTGCCCGCGGGCGGTGGTGGCACTGGCGGTGGCGAACCCCAGCAATGGTCCCCCAGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp CACCTCGGAGGGCAGGTGGAAGAACTCGCTACGCCCTaGCGCCAGCGAGCCCGCGCCCGCCGTGATGGTGCG +
Preference number: 6 (lower is better)
Translates to: HLGGQVEELATP*RQRARARRDGA
Trigger: CGCACCATCACGGCGGGCGCGGGCTCGCTGGCGCCAGGGCGTAGCGAGTTCTTCCACCTGCCCTCCGAGGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp CTGACCACGCGGCAGCGGTGCCACATGAGCCCCACCTaGACCAGGCACAGCTCTCCCGGCGATGCCGACGCC +
Preference number: 6 (lower is better)
Translates to: LTTRQRCHMSPT*TRHSSPGDADA
Trigger: GGCGTCGGCATCGCCGGGAGAGCTGTGCCTGGTGCAGGTGGGGCTCATGTGGCACCGCTGCCGCGTGGTCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp GTGCGGCCCTCATCCAGCAGGAAGACGCGGCTGTCTTaGGCCTGGCGGCTGACCACGCGGCAGCGGTGCCAC +
Preference number: 6 (lower is better)
Translates to: VRPSSSRKTRLS*AWRLTTRQRCH
Trigger: GTGGCACCGCTGCCGCGTGGTCAGCCGCCAGGCGCAAGACAGCCGCGTCTTCCTGCTGGATGAGGGCCGCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp GGTGCGGCCCTCATCCAGCAGGAAGACGCGGCTGTCTaGCGCCTGGCGGCTGACCACGCGGCAGCGGTGCCA +
Preference number: 6 (lower is better)
Translates to: GAALIQQEDAAV*RLAADHAAAVP
Trigger: TGGCACCGCTGCCGCGTGGTCAGCCGCCAGGCGCAAGACAGCCGCGTCTTCCTGCTGGATGAGGGCCGCACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp CGCCGTGATGGTGCGGCCCTCATCCAGCAGGAAGACGCGGCTGTCTaGCGCCTGGCGGCTGACCACGCGGCAGCGGTGCCACATGAGCCC +
Preference number: 6 (lower is better)
Translates to: RRDGAALIQQEDAAV*RLAADHAAAVPHEP
Trigger: GGGCTCATGTGGCACCGCTGCCGCGTGGTCAGCCGCCAGGCGCAAGACAGCCGCGTCTTCCTGCTGGATGAGGGCCGCACCATCACGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp CTGTCTTGCGCCTGGCGGCTGACCACGCGGCAGCGGTaGCACATGAGCCCCACCTGCACCAGGCACAGCTCT +
Preference number: 6 (lower is better)
Translates to: LSCAWRLTTRQR*HMSPTCTRHSS
Trigger: AGAGCTGTGCCTGGTGCAGGTGGGGCTCATGTGGCACCGCTGCCGCGTGGTCAGCCGCCAGGCGCAAGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp CCCTCATCCAGCAGGAAGACGCGGCTGTCTTGCGCCTaGCGGCTGACCACGCGGCAGCGGTGCCACATGAGC +
Preference number: 6 (lower is better)
Translates to: PSSSRKTRLSCA*RLTTRQRCHMS
Trigger: GCTCATGTGGCACCGCTGCCGCGTGGTCAGCCGCCAGGCGCAAGACAGCCGCGTCTTCCTGCTGGATGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp CCTGCTAGCACACAGCCCAGCACCTCGGAGGGCAGGTaGAAGAACTCGCTACGCCCTGGCGCCAGCGAGCCC +
Preference number: 6 (lower is better)
Translates to: PASTQPSTSEGR*KNSLRPGASEP
Trigger: GGGCTCGCTGGCGCCAGGGCGTAGCGAGTTCTTCCACCTGCCCTCCGAGGTGCTGGGCTGTGTGCTAGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 72 bp ATCTCCCGGCTCAGCCGCACGTACTCCTCCCGCCGCTaGCCCACCAGTCCCCACAGCTGCACTGGGATCACC +
Preference number: 6 (lower is better)
Translates to: ISRLSRTYSSRR*PTSPHSCTGIT
Trigger: GGTGATCCCAGTGCAGCTGTGGGGACTGGTGGGTCAGCGGCGGGAGGAGTACGTGCGGCTGAGCCGGGAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp ACCAGTCCCCACAGCTGCACTGGGATCACCTCGGGATaGACGTCCACGAAGGACACCCGCAGGGCCAGCGAG +
Preference number: 6 (lower is better)
Translates to: TSPHSCTGITSG*TSTKDTRRASE
Trigger: CTCGCTGGCCCTGCGGGTGTCCTTCGTGGACGTGCATCCCGAGGTGATCCCAGTGCAGCTGTGGGGACTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp CTCCCGCCGCTGACCCACCAGTCCCCACAGCTGCACTaGGATCACCTCGGGATGCACGTCCACGAAGGACAC +
Preference number: 6 (lower is better)
Translates to: LPPLTHQSPQLH*DHLGMHVHEGH
Trigger: GTGTCCTTCGTGGACGTGCATCCCGAGGTGATCCCAGTGCAGCTGTGGGGACTGGTGGGTCAGCGGCGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp TTGCTAAGGAAATCCACAGCCCTGGGGGACCATTGCTaGGGTTCGCCACCGCCAGTGCCACCACCGCCCGCG +
Preference number: 6 (lower is better)
Translates to: LLRKSTALGDHC*GSPPPVPPPPA
Trigger: CGCGGGCGGTGGTGGCACTGGCGGTGGCGAACCCCAGCAATGGTCCCCCAGGGCTGTGGATTTCCTTAGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp AGGTTGCTAAGGAAATCCACAGCCCTGGGGGACCATTaGTGGGGTTCGCCACCGCCAGTGCCACCACCGCCC +
Preference number: 6 (lower is better)
Translates to: RLLRKSTALGDH*WGSPPPVPPPP
Trigger: GGGCGGTGGTGGCACTGGCGGTGGCGAACCCCAGCAATGGTCCCCCAGGGCTGTGGATTTCCTTAGCAACCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp CATCTGTCCCCACAGGCGCCCGGTATACCTGGGCCATaGTCTCAGAGAGACGGTGGATCTCCTGCGAGAGGC +
Preference number: 6 (lower is better)
Translates to: HLSPQAPGIPGP*SQRDGGSPARG
Trigger: GCCTCTCGCAGGAGATCCACCGTCTCTCTGAGAGCATGGCCCAGGTATACCGGGCGCCTGTGGGGACAGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp GCCTGGCCCAGGATCAGAGCTTTCAGATCACCTACTTaGGACCGGGACCAGCCTCTCCCGCAGTCCCAGAGT +
Preference number: 6 (lower is better)
Translates to: AWPRIRAFRSPT*DRDQPLPQSQS
Trigger: ACTCTGGGACTGCGGGAGAGGCTGGTCCCGGTCCCAAGTAGGTGATCTGAAAGCTCTGATCCTGGGCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp TCCAGGACCCGTCCGTGCACCTCCTTGCCCTGCAGGTaGCTAAGGAAATCCACAGCCCTGGGGGACCATTGC +
Preference number: 6 (lower is better)
Translates to: SRTRPCTSLPCR*LRKSTALGDHC
Trigger: GCAATGGTCCCCCAGGGCTGTGGATTTCCTTAGCAACCTGCAGGGCAAGGAGGTGCACGGACGGGTCCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp GCGTTTGAGCAGCGAACAGAAGAGGCTGTCCGGCACTaGCCGGGCCAGACCCAGCTCCTCCATCTGCTGAGA +
Preference number: 6 (lower is better)
Translates to: AFEQRTEEAVRH*PGQTQLLHLLR
Trigger: TCTCAGCAGATGGAGGAGCTGGGTCTGGCCCGGCAAGTGCCGGACAGCCTCTTCTGTTCGCTGCTCAAACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp CCGTCCAAGCCACAGGAAGCACATGGAGATCCCGGTTaGTCAGGGCTCTCCTCCCTCTCCTCCCAGGTGGCA +
Preference number: 6 (lower is better)
Translates to: PSKPQEAHGDPG*SGLSSLSSQVA
Trigger: TGCCACCTGGGAGGAGAGGGAGGAGAGCCCTGACAAACCGGGATCTCCATGTGCTTCCTGTGGCTTGGACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp TGCCTGGCCCAGGATCAGAGCTTTCAGATCACCTACTaGGGACCGGGACCAGCCTCTCCCGCAGTCCCAGAG +
Preference number: 6 (lower is better)
Translates to: CLAQDQSFQITY*GPGPASPAVPE
Trigger: CTCTGGGACTGCGGGAGAGGCTGGTCCCGGTCCCAAGTAGGTGATCTGAAAGCTCTGATCCTGGGCCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp TGGCTCCTGCCTGGCAGCCTGGAGACAGCGGTGCCATaGGAGACCCCAGGCCTAGCTCCTCTTTCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: WLLPGSLETAVP*ETPGLAPLSLP
Trigger: AGGAAGAGAAAGAGGAGCTAGGCCTGGGGTCTCCAATGGCACCGCTGTCTCCAGGCTGCCAGGCAGGAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp AGCAACACATCCAGGACCCGTCCGTGCACCTCCTTGCCCTGCAGGTaGCTAAGGAAATCCACAGCCCTGGGGGACCATTGCTGGGGTTCG +
Preference number: 6 (lower is better)
Translates to: SNTSRTRPCTSLPCR*LRKSTALGDHCWGS
Trigger: CGAACCCCAGCAATGGTCCCCCAGGGCTGTGGATTTCCTTAGCAACCTGCAGGGCAAGGAGGTGCACGGACGGGTCCTGGATGTGTTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp AGGCGATGGAGGAGCAACACATCCAGGACCCGTCCGTGCACCTCCTaGCCCTGCAGGTTGCTAAGGAAATCCACAGCCCTGGGGGACCAT +
Preference number: 6 (lower is better)
Translates to: RRWRSNTSRTRPCTS*PCRLLRKSTALGDH
Trigger: ATGGTCCCCCAGGGCTGTGGATTTCCTTAGCAACCTGCAGGGCAAGGAGGTGCACGGACGGGTCCTGGATGTGTTGCTCCTCCATCGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp AACACATCCAGGACCCGTCCGTGCACCTCCTTGCCCTaGAGGTTGCTAAGGAAATCCACAGCCCTGGGGGAC +
Preference number: 6 (lower is better)
Translates to: NTSRTRPCTSLP*RLLRKSTALGD
Trigger: GTCCCCCAGGGCTGTGGATTTCCTTAGCAACCTGCAGGGCAAGGAGGTGCACGGACGGGTCCTGGATGTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp TCCTCATCATCTGTCCCCACAGGCGCCCGGTATACCTaGGCCATGCTCTCAGAGAGACGGTGGATCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SSSSVPTGARYT*AMLSERRWISC
Trigger: GCAGGAGATCCACCGTCTCTCTGAGAGCATGGCCCAGGTATACCGGGCGCCTGTGGGGACAGATGATGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp AGTTGCATCATGAATGACTCCAGGGTGGCTCCTGCCTaGCAGCCTGGAGACAGCGGTGCCATTGGAGACCCC +
Preference number: 6 (lower is better)
Translates to: SCIMNDSRVAPA*QPGDSGAIGDP
Trigger: GGGGTCTCCAATGGCACCGCTGTCTCCAGGCTGCCAGGCAGGAGCCACCCTGGAGTCATTCATGATGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp AGTCAGGTAGCGTTTGAGCAGCGAACAGAAGAGGCTGTCCGGCACTaGCCGGGCCAGACCCAGCTCCTCCATCTGCTGAGACACAACTGG +
Preference number: 6 (lower is better)
Translates to: SQVAFEQRTEEAVRH*PGQTQLLHLLRHNW
Trigger: CCAGTTGTGTCTCAGCAGATGGAGGAGCTGGGTCTGGCCCGGCAAGTGCCGGACAGCCTCTTCTGTTCGCTGCTCAAACGCTACCTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp TCCCAGCTGCAGTTGGGGATAAAAGTAATCCAACCCAGGATGCTCTaGTTTGGGCGCGGCTCGCGGGAGAACTGGAGCTCCGGAGCTGCC +
Preference number: 6 (lower is better)
Translates to: SQLQLGIKVIQPRML*FGRGSRENWSSGAA
Trigger: GGCAGCTCCGGAGCTCCAGTTCTCCCGCGAGCCGCGCCCAAACAAGAGCATCCTGGGTTGGATTACTTTTATCCCCAACTGCAGCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp CGAGAGGCTCCGCAGTTGACAGTGAATTCGGTGGGGATGGCATACTaGGGTTACTACCACCGGCTCCGTCACTCCCAGCTGCAGTTGGGG +
Preference number: 6 (lower is better)
Translates to: REAPQLTVNSVGMAY*GYYHRLRHSQLQLG
Trigger: CCCCAACTGCAGCTGGGAGTGACGGAGCCGGTGGTAGTAACCCAAGTATGCCATCCCCACCGAATTCACTGTCAACTGCGGAGCCTCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 72 bp CTCAGCCTCACAGTCCAGGGGAAGTTGCATCATGAATaGCTCCAGGGTGGCTCCTGCCTGGCAGCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: LSLTVQGKLHHE*LQGGSCLAAWR
Trigger: TCTCCAGGCTGCCAGGCAGGAGCCACCCTGGAGTCATTCATGATGCAACTTCCCCTGGACTGTGAGGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 72 bp CTCCTCTTCAGACAGGTTCCTTCCACCGTGTGCCGGTaGATTGCCACCCTTCCCGTGTTGGAGGAGGGGAGA +
Preference number: 6 (lower is better)
Translates to: LLFRQVPSTVCR*IATLPVLEEGR
Trigger: TCTCCCCTCCTCCAACACGGGAAGGGTGGCAATTCACCGGCACACGGTGGAAGGAACCTGTCTGAAGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp GGGGATAAAAGTAATCCAACCCAGGATGCTCTTGTTTaGGCGCGGCTCGCGGGAGAACTGGAGCTCCGGAGC +
Preference number: 6 (lower is better)
Translates to: GDKSNPTQDALV*ARLAGELELRS
Trigger: GCTCCGGAGCTCCAGTTCTCCCGCGAGCCGCGCCCAAACAAGAGCATCCTGGGTTGGATTACTTTTATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp CCACCGTGTGCCGGTGAATTGCCACCCTTCCCGTGTTaGAGGAGGGGAGACCTGCTGTGGTCATCATCAGAA +
Preference number: 6 (lower is better)
Translates to: PPCAGELPPFPC*RRGDLLWSSSE
Trigger: TTCTGATGATGACCACAGCAGGTCTCCCCTCCTCCAACACGGGAAGGGTGGCAATTCACCGGCACACGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp AGGAGCAACACATCCAGGACCCGTCCGTGCACCTCCTaGCCCTGCAGGTTGCTAAGGAAATCCACAGCCCTG +
Preference number: 6 (lower is better)
Translates to: RSNTSRTRPCTS*PCRLLRKSTAL
Trigger: CAGGGCTGTGGATTTCCTTAGCAACCTGCAGGGCAAGGAGGTGCACGGACGGGTCCTGGATGTGTTGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp TGCATGGGGACCAGCAGAAGCTCAGAAGGGATGCTCCAAAGCTCCTaGGCGTCCACACAGTCCTCCGCATTCCCAAAGTCCACAAGCCTG +
Preference number: 6 (lower is better)
Translates to: CMGTSRSSEGMLQSS*ASTQSSAFPKSTSL
Trigger: CAGGCTTGTGGACTTTGGGAATGCGGAGGACTGTGTGGACGCCAAGGAGCTTTGGAGCATCCCTTCTGAGCTTCTGCTGGTCCCCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 72 bp AATCGACGTGAAGCACCTGAGCACAGCGCTGAGGCCTaGAGGTCTCAAGCAAGAGAGCCCGGTACCACTGTC +
Preference number: 6 (lower is better)
Translates to: NRREAPEHSAEA*RSQAREPGTTV
Trigger: GACAGTGGTACCGGGCTCTCTTGCTTGAGACCTTCAGGCCTCAGCGCTGTGCTCAGGTGCTTCACGTCGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp TGCCCCGCTAATCAGAGCTCTGGACCATCTCCCGCTTaGTGTTCGCTTTGCCAGACAAACACGAGTGTCCCC +
Preference number: 6 (lower is better)
Translates to: CPANQSSGPSPA*CSLCQTNTSVP
Trigger: GGGGACACTCGTGTTTGTCTGGCAAAGCGAACAGCAAGCGGGAGATGGTCCAGAGCTCTGATTAGCGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp GGGAAAACGGCACATATCACATCTCCGCTCTGCCACTaGGGACCTGTGTGGTACTGGGGCCGTGTTCTGACA +
Preference number: 6 (lower is better)
Translates to: GKTAHITSPLCH*GPVWYWGRVLT
Trigger: TGTCAGAACACGGCCCCAGTACCACACAGGTCCGCAGTGGCAGAGCGGAGATGTGATATGTGCCGTTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp TCCTCTGGGAAAACGGCACATATCACATCTCCGCTCTaGCACTGCGGACCTGTGTGGTACTGGGGCCGTGTT +
Preference number: 6 (lower is better)
Translates to: SSGKTAHITSPL*HCGPVWYWGRV
Trigger: AACACGGCCCCAGTACCACACAGGTCCGCAGTGGCAGAGCGGAGATGTGATATGTGCCGTTTTCCCAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp TCCAGCTGCTTCTCAGCCTCACAGTCCAGGGGAAGTTaGATCATGAATGACTCCAGGGTGGCTCCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: SSCFSASQSRGS*IMNDSRVAPAW
Trigger: CCAGGCAGGAGCCACCCTGGAGTCATTCATGATGCAACTTCCCCTGGACTGTGAGGCTGAGAAGCAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp CCGCAGTTGACAGTGAATTCGGTGGGGATGGCATACTaGGGTTACTACCACCGGCTCCGTCACTCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: PQLTVNSVGMAY*GYYHRLRHSQL
Trigger: CAGCTGGGAGTGACGGAGCCGGTGGTAGTAACCCAAGTATGCCATCCCCACCGAATTCACTGTCAACTGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp TCAGAGCTCTGGACCATCTCCCGCTTGCTGTTCGCTTaGCCAGACAAACACGAGTGTCCCCCTCGTAGGGAG +
Preference number: 6 (lower is better)
Translates to: SELWTISRLLFA*PDKHECPPRRE
Trigger: CTCCCTACGAGGGGGACACTCGTGTTTGTCTGGCAAAGCGAACAGCAAGCGGGAGATGGTCCAGAGCTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp AAAGACAGCTGGGGTGTGGGCAGCTTCAGTTCCAGCTaGTTCTCAGCCTCACAGTCCAGGGGAAGTTGCATC +
Preference number: 6 (lower is better)
Translates to: KDSWGVGSFSSS*FSASQSRGSCI
Trigger: GATGCAACTTCCCCTGGACTGTGAGGCTGAGAAGCAGCTGGAACTGAAGCTGCCCACACCCCAGCTGTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp CCAGCAGAAGCTCAGAAGGGATGCTCCAAAGCTCCTTaGCGTCCACACAGTCCTCCGCATTCCCAAAGTCCA +
Preference number: 6 (lower is better)
Translates to: PAEAQKGCSKAP*RPHSPPHSQSP
Trigger: TGGACTTTGGGAATGCGGAGGACTGTGTGGACGCCAAGGAGCTTTGGAGCATCCCTTCTGAGCTTCTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp AAGGGCTTATGCTGTCCTCCAAAGACAGCTGGGGTGTaGGCAGCTTCAGTTCCAGCTGCTTCTCAGCCTCAC +
Preference number: 6 (lower is better)
Translates to: KGLCCPPKTAGV*AASVPAASQPH
Trigger: GTGAGGCTGAGAAGCAGCTGGAACTGAAGCTGCCCACACCCCAGCTGTCTTTGGAGGACAGCATAAGCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp CAGTTGGGGATAAAAGTAATCCAACCCAGGATGCTCTaGTTTGGGCGCGGCTCGCGGGAGAACTGGAGCTCC +
Preference number: 6 (lower is better)
Translates to: QLGIKVIQPRML*FGRGSRENWSS
Trigger: GGAGCTCCAGTTCTCCCGCGAGCCGCGCCCAAACAAGAGCATCCTGGGTTGGATTACTTTTATCCCCAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp AGAGAGACGGTGGATCTCCTGCGAGAGGCTCCGCAGTaGACAGTGAATTCGGTGGGGATGGCATACTTGGGT +
Preference number: 6 (lower is better)
Translates to: RETVDLLREAPQ*TVNSVGMAYLG
Trigger: ACCCAAGTATGCCATCCCCACCGAATTCACTGTCAACTGCGGAGCCTCTCGCAGGAGATCCACCGTCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp ACCAGCAGAAGCTCAGAAGGGATGCTCCAAAGCTCCTaGGCGTCCACACAGTCCTCCGCATTCCCAAAGTCC +
Preference number: 6 (lower is better)
Translates to: TSRSSEGMLQSS*ASTQSSAFPKS
Trigger: GGACTTTGGGAATGCGGAGGACTGTGTGGACGCCAAGGAGCTTTGGAGCATCCCTTCTGAGCTTCTGCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp CATGCTCTCAGAGAGACGGTGGATCTCCTGCGAGAGGCTCCGCAGTaGACAGTGAATTCGGTGGGGATGGCATACTTGGGTTACTACCAC +
Preference number: 6 (lower is better)
Translates to: HALRETVDLLREAPQ*TVNSVGMAYLGYYH
Trigger: GTGGTAGTAACCCAAGTATGCCATCCCCACCGAATTCACTGTCAACTGCGGAGCCTCTCGCAGGAGATCCACCGTCTCTCTGAGAGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 72 bp CCACCTGGGCGTCATAGAAGGTGTTCATCTTCAGCCTaGTGGATCTCAAGGAGGGGAGGGAAACTTCCGCCT +
Preference number: 6 (lower is better)
Translates to: PPGRHRRCSSSA*WISRRGGKLPP
Trigger: AGGCGGAAGTTTCCCTCCCCTCCTTGAGATCCATCAGGCTGAAGATGAACACCTTCTATGACGCCCAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp GAGACTGAGAATCCAGCGAGGCAGCATGGAAATGCTTaGATGGGGACCAGCAGAAGCTCAGAAGGGATGCTC +
Preference number: 6 (lower is better)
Translates to: ETENPARQHGNA*MGTSRSSEGML
Trigger: GAGCATCCCTTCTGAGCTTCTGCTGGTCCCCATGCAAGCATTTCCATGCTGCCTCGCTGGATTCTCAGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp GCATACTTGGGTTACTACCACCGGCTCCGTCACTCCCAGCTGCAGTaGGGGATAAAAGTAATCCAACCCAGGATGCTCTTGTTTGGGCGC +
Preference number: 6 (lower is better)
Translates to: AYLGYYHRLRHSQLQ*GIKVIQPRMLLFGR
Trigger: GCGCCCAAACAAGAGCATCCTGGGTTGGATTACTTTTATCCCCAACTGCAGCTGGGAGTGACGGAGCCGGTGGTAGTAACCCAAGTATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp GGTGCCAATAAGGCGGCGCTGTCTCTACTTTCAAACTaGGGAAACTCCTCTTCAGACAGGTTCCTTCCACCG +
Preference number: 6 (lower is better)
Translates to: GANKAALSLLSN*GNSSSDRFLPP
Trigger: CGGTGGAAGGAACCTGTCTGAAGAGGAGTTTCCGCAGTTTGAAAGTAGAGACAGCGCCGCCTTATTGGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp ATTTCGATCCGACAGAGAAGCCTTTCAGAGTGTAGGTaGTCTGTAGCTGAGCTGCTGGTACCATGCTCCCGC +
Preference number: 6 (lower is better)
Translates to: ISIRQRSLSECR*SVAELLVPCSR
Trigger: GCGGGAGCATGGTACCAGCAGCTCAGCTACAGAGCACCTACACTCTGAAAGGCTTCTCTGTCGGATCGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045717.7
CDS GCA 72 bp TCAGAGTGTAGGTGCTCTGTAGCTGAGCTGGTACCATaGTCCCGCACTTCCTTCCTTCTCTGGCTTCTTCCT +
Preference number: 6 (lower is better)
Translates to: SECRCSVAELVP*SRTSFLLWLLP
Trigger: AGGAAGAAGCCAGAGAAGGAAGGAAGTGCGGGAGCATGGTACCAGCTCAGCTACAGAGCACCTACACTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp CTGAGAATCCAGCGAGGCAGCATGGAAATGCTTGCATaGGGACCAGCAGAAGCTCAGAAGGGATGCTCCAAA +
Preference number: 6 (lower is better)
Translates to: LRIQRGSMEMLA*GPAEAQKGCSK
Trigger: TTTGGAGCATCCCTTCTGAGCTTCTGCTGGTCCCCATGCAAGCATTTCCATGCTGCCTCGCTGGATTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp GCAGATAAAGGGCTTATGCTGTCCTCCAAAGACAGCTaGGGTGTGGGCAGCTTCAGTTCCAGCTGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: ADKGLMLSSKDS*GVGSFSSSCFS
Trigger: TGAGAAGCAGCTGGAACTGAAGCTGCCCACACCCCAGCTGTCTTTGGAGGACAGCATAAGCCCTTTATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp CCGGCCTTTCTCTCATCCTCCGAATACCTGGATTCCTaGATGTCCTGGCTGACAGCTGCAGATAAAGGGCTT +
Preference number: 6 (lower is better)
Translates to: PAFLSSSEYLDS*MSWLTAADKGL
Trigger: AAGCCCTTTATCTGCAGCTGTCAGCCAGGACATCCAGGAATCCAGGTATTCGGAGGATGAGAGAAAGGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp CTGCTGGTACCATGCTCCCGCACTTCCTTCCTTCTCTaGCTTCTTCCTCAGAGAACAAGGGTGCCAATAAGG +
Preference number: 6 (lower is better)
Translates to: LLVPCSRTSFLL*LLPQRTRVPIR
Trigger: CCTTATTGGCACCCTTGTTCTCTGAGGAAGAAGCCAGAGAAGGAAGGAAGTGCGGGAGCATGGTACCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000045717.7
CDS CCA 72 bp GAGCTGGTACCATGCTCCCGCACTTCCTTCCTTCTCTaGCTTCTTCCTCAGAGAACAAGGGTGCCAATAAGG +
Preference number: 6 (lower is better)
Translates to: ELVPCSRTSFLL*LLPQRTRVPIR
Trigger: CCTTATTGGCACCCTTGTTCTCTGAGGAAGAAGCCAGAGAAGGAAGGAAGTGCGGGAGCATGGTACCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp CTCTCTGGGCCACGCTTCTCAGAGGACAGGTCATTCTaGGGCACGCCCGTCTTAGCATACTTCTTCATCTTC +
Preference number: 6 (lower is better)
Translates to: LSGPRFSEDRSF*GTPVLAYFFIF
Trigger: GAAGATGAAGAAGTATGCTAAGACGGGCGTGCCCAAGAATGACCTGTCCTCTGAGAAGCGTGGCCCAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp CCACACGCCTCCTCCTCTGAAACAGAAGAAAAACCTTaGGTGGTGGCGTCATCCGATGGCATGAAGGGAAGG +
Preference number: 6 (lower is better)
Translates to: PHASSSETEEKP*VVASSDGMKGR
Trigger: CCTTCCCTTCATGCCATCGGATGACGCCACCACCAAAGGTTTTTCTTCTGTTTCAGAGGAGGAGGCGTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 72 bp CATCCTCCGAATACCTGGATTCCTGGATGTCCTGGCTaGCAGCTGCAGATAAAGGGCTTATGCTGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: HPPNTWIPGCPG*QLQIKGLCCPP
Trigger: TGGAGGACAGCATAAGCCCTTTATCTGCAGCTGTCAGCCAGGACATCCAGGAATCCAGGTATTCGGAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp TCACGATGCACGGATCTCCAATTTGTGGACATTGGGTaGAGCTTCTTCTGTCAGAGAGCTGCTTGCCAGCAC +
Preference number: 6 (lower is better)
Translates to: SRCTDLQFVDIG*SFFCQRAACQH
Trigger: GTGCTGGCAAGCAGCTCTCTGACAGAAGAAGCTGCACCCAATGTCCACAAATTGGAGATCCGTGCATCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp ATTTCGATCCGACAGAGAAGCCTTTCAGAGTGTAGGTaGTCTGTAGCTGAGCTGGTACCATGCTCCCGCACT +
Preference number: 6 (lower is better)
Translates to: ISIRQRSLSECR*SVAELVPCSRT
Trigger: AGTGCGGGAGCATGGTACCAGCTCAGCTACAGAGCACCTACACTCTGAAAGGCTTCTCTGTCGGATCGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp GAGGGATGTCCGATAAGGAGCATTTCAAGGCTTGCATaGGCAGAAGTAAGACATCATGGGCATCTCGGGGGA +
Preference number: 6 (lower is better)
Translates to: EGCPIRSISRLA*AEVRHHGHLGG
Trigger: TCCCCCGAGATGCCCATGATGTCTTACTTCTGCCCATGCAAGCCTTGAAATGCTCCTTATCGGACATCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp CTCTCATCCTCCGAATACCTGGATTCCTGGATGTCCTaGCTGACAGCTGCAGATAAAGGGCTTATGCTGTCC +
Preference number: 6 (lower is better)
Translates to: LSSSEYLDSWMS*LTAADKGLMLS
Trigger: GGACAGCATAAGCCCTTTATCTGCAGCTGTCAGCCAGGACATCCAGGAATCCAGGTATTCGGAGGATGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp ATAGTCCTCGATGTCACACATCAAGGTTCTGAAGCCTaGCGCGTTCCTCATCAGCTGACACCAGAAGGAGCC +
Preference number: 6 (lower is better)
Translates to: IVLDVTHQGSEA*RVPHQLTPEGA
Trigger: GGCTCCTTCTGGTGTCAGCTGATGAGGAACGCGCAAGGCTTCAGAACCTTGATGTGTGACATCGAGGACTAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp GTACCTCACGATGCACGGATCTCCAATTTGTGGACATaGGGTGCAGCTTCTTCTGTCAGAGAGCTGCTTGCC +
Preference number: 6 (lower is better)
Translates to: VPHDARISNLWT*GAASSVRELLA
Trigger: GGCAAGCAGCTCTCTGACAGAAGAAGCTGCACCCAATGTCCACAAATTGGAGATCCGTGCATCGTGAGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp GTAATGCCCGTCTTCTCTGTACCTCACGATGCACGGATCTCCAATTaGTGGACATTGGGTGCAGCTTCTTCTGTCAGAGAGCTGCTTGCC +
Preference number: 6 (lower is better)
Translates to: VMPVFSVPHDARISN*WTLGAASSVRELLA
Trigger: GGCAAGCAGCTCTCTGACAGAAGAAGCTGCACCCAATGTCCACAAATTGGAGATCCGTGCATCGTGAGGTACAGAGAAGACGGGCATTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp CTCCGAGAGCTCGCTTGCCCGGGCTTCCCCGTAGAATGTCTTATCTaGTGCTATTTTATGACTTGGCTTCTTGAGGCCAAGGTCAGGACT +
Preference number: 6 (lower is better)
Translates to: LRELACPGFPVECLI*CYFMTWLLEAKVRT
Trigger: AGTCCTGACCTTGGCCTCAAGAAGCCAAGTCATAAAATAGCACAAGATAAGACATTCTACGGGGAAGCCCGGGCAAGCGAGCTCTCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp GCTTTTGCAATAGTCCTCGATGTCACACATCAAGGTTCTGAAGCCTaGCGCGTTCCTCATCAGCTGACACCAGAAGGAGCCAGGGTTTTC +
Preference number: 6 (lower is better)
Translates to: AFAIVLDVTHQGSEA*RVPHQLTPEGARVF
Trigger: GAAAACCCTGGCTCCTTCTGGTGTCAGCTGATGAGGAACGCGCAAGGCTTCAGAACCTTGATGTGTGACATCGAGGACTATTGCAAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp GTCTTCTCTGTACCTCACGATGCACGGATCTCCAATTTGTGGACATaGGGTGCAGCTTCTTCTGTCAGAGAGCTGCTTGCCAGCACTTTG +
Preference number: 6 (lower is better)
Translates to: VFSVPHDARISNLWT*GAASSVRELLASTL
Trigger: CAAAGTGCTGGCAAGCAGCTCTCTGACAGAAGAAGCTGCACCCAATGTCCACAAATTGGAGATCCGTGCATCGTGAGGTACAGAGAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp CTTCCCTTTCTCTCTGGGCCACGCTTCTCAGAGGACAGGTCATTCTaGGGCACGCCCGTCTTAGCATACTTCTTCATCTTCTCGTTAATG +
Preference number: 6 (lower is better)
Translates to: LPFLSGPRFSEDRSF*GTPVLAYFFIFSLM
Trigger: CATTAACGAGAAGATGAAGAAGTATGCTAAGACGGGCGTGCCCAAGAATGACCTGTCCTCTGAGAAGCGTGGCCCAGAGAGAAAGGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 72 bp AGGCGCTCTGAAAGGGCGTCAGCAAGTCCACAACATTaGACCACTCTTCCTCATGCCTTGATGCCAAAGCAA +
Preference number: 6 (lower is better)
Translates to: RRSERASASPQH*TTLPHALMPKQ
Trigger: TTGCTTTGGCATCAAGGCATGAGGAAGAGTGGTTCAATGTTGTGGACTTGCTGACGCCCTTTCAGAGCGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 72 bp CAGCTTCTTCTGTCAGAGAGCTGCTTGCCAGCACTTTaGACCTCCGTTTCCAGATACTGCAGCTTCTCGGAA +
Preference number: 6 (lower is better)
Translates to: QLLLSESCLPAL*TSVSRYCSFSE
Trigger: TTCCGAGAAGCTGCAGTATCTGGAAACGGAGGTTCAAAGTGCTGGCAAGCAGCTCTCTGACAGAAGAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 72 bp CAGAGAATCTGCATCACCTCCACACGCCTCCTCCTCTaGAACAGAAGAAAAACCTTTGGTGGTGGCGTCATC +
Preference number: 6 (lower is better)
Translates to: QRICITSTRLLL*NRRKTFGGGVI
Trigger: GATGACGCCACCACCAAAGGTTTTTCTTCTGTTTCAGAGGAGGAGGCGTGTGGAGGTGATGCAGATTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 72 bp CGTTACCTTCTCTGTGTCCTGTGCAGTAGAAAGGTTTaGAAGGCTGACCGTGTCCGCCAAAGCTTTGGCAGA +
Preference number: 6 (lower is better)
Translates to: RYLLCVLCSRKV*KADRVRQSFGR
Trigger: TCTGCCAAAGCTTTGGCGGACACGGTCAGCCTTTCAAACCTTTCTACTGCACAGGACACAGAGAAGGTAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233077.2
CDS GCA 72 bp CCGAGCGCTATCGATGAACCCGCTGAAAGCCTGTACTaGCTTTTCATCCCAGACAAAGGGATTTTCACCCAT +
Preference number: 6 (lower is better)
Translates to: PSAIDEPAESLY*LFIPDKGIFTH
Trigger: ATGGGTGAAAATCCCTTTGTCTGGGATGAAAAGGCAGTACAGGCTTTCAGCGGGTTCATCGATAGCGCTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp GACATTGGGTGCAGCTTCTTCTGTCAGAGAGCTGCTTaGCAGCACTTTGAACCTCCGTTTCCAGATACTGCA +
Preference number: 6 (lower is better)
Translates to: DIGCSFFCQRAA*QHFEPPFPDTA
Trigger: TGCAGTATCTGGAAACGGAGGTTCAAAGTGCTGGCAAGCAGCTCTCTGACAGAAGAAGCTGCACCCAATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp CTCTGTAGTAATGCCCGTCTTCTCTGTACCTCACGATaGACGGATCTCCAATTTGTGGACATTGGGTGCAGC +
Preference number: 6 (lower is better)
Translates to: LCSNARLLCTSR*TDLQFVDIGCS
Trigger: GCTGCACCCAATGTCCACAAATTGGAGATCCGTGCATCGTGAGGTACAGAGAAGACGGGCATTACTACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp GCTGCCCACCTCCAGTTCCCCTTTACCACAGCAGTCTaGTTTGGTTTTCAAGAAGTTCAGCATGAGGAGAGA +
Preference number: 6 (lower is better)
Translates to: AAHLQFPFTTAV*FGFQEVQHEER
Trigger: TCTCTCCTCATGCTGAACTTCTTGAAAACCAAACCAGACTGCTGTGGTAAAGGGGAACTGGAGGTGGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp CCCACCTCCAGTTCCCCTTTACCACAGCAGTCTGGTTaGGTTTTCAAGAAGTTCAGCATGAGGAGAGATGGG +
Preference number: 6 (lower is better)
Translates to: PTSSSPLPQQSG*VFKKFSMRRDG
Trigger: CCCATCTCTCCTCATGCTGAACTTCTTGAAAACCAAACCAGACTGCTGTGGTAAAGGGGAACTGGAGGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp GCATTCGAAAATACTCCGGCAGCAGATAGCGGAGGCTaGTGCAGCTTACTAGTTCTTTCCTTCCGTAATCGA +
Preference number: 6 (lower is better)
Translates to: AFENTPAADSGG*CSLLVLSFRNR
Trigger: TCGATTACGGAAGGAAAGAACTAGTAAGCTGCAGCAGCCTCCGCTATCTGCTGCCGGAGTATTTTCGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp CTGCACATTCTCTTCGTCAGCTTGCTGAAGGTGTTCTaGTGCTTTCTAAGGCGAATCCAGAACTCCGAAGGG +
Preference number: 6 (lower is better)
Translates to: LHILFVSLLKVF*CFLRRIQNSEG
Trigger: CCCTTCGGAGTTCTGGATTCGCCTTAGAAAGCACAAGAACACCTTCAGCAAGCTGACGAAGAGAATGTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp GTCTTCTCTGTACCTCACGATGCACGGATCTCCAATTaGTGGACATTGGGTGCAGCTTCTTCTGTCAGAGAG +
Preference number: 6 (lower is better)
Translates to: VFSVPHDARISN*WTLGAASSVRE
Trigger: CTCTCTGACAGAAGAAGCTGCACCCAATGTCCACAAATTGGAGATCCGTGCATCGTGAGGTACAGAGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp CTCTATCCCCTGGCTCTGAAGAAACCAGTCAGCCAGGCAACAGGATaGTACTCCGAATGCACTGTTGAGATTAATCCCATCTTCCCCATA +
Preference number: 6 (lower is better)
Translates to: LYPLALKKPVSQATG*YSECTVEINPIFPI
Trigger: TATGGGGAAGATGGGATTAATCTCAACAGTGCATTCGGAGTACAATCCTGTTGCCTGGCTGACTGGTTTCTTCAGAGCCAGGGGATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp TTTCCCACTGTTTGGAATACAGCCTCAGAAGGTCTCTTATCTACCTaGGGAATCCCATTCCAGACATTCTCGGGGCTTACTGTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: FPTVWNTASEGLLST*GIPFQTFSGLTVSS
Trigger: GGAGGAGACAGTAAGCCCCGAGAATGTCTGGAATGGGATTCCCAAGGTAGATAAGAGACCTTCTGAGGCTGTATTCCAAACAGTGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 72 bp CCAGGAACACATCCACACTCTTGCTGTCTAATCGGGTaGCCGTGGCTCGGTAATAGCCATTTTCTTTCCATT +
Preference number: 6 (lower is better)
Translates to: PGTHPHSCCLIG*PWLGNSHFLSI
Trigger: AATGGAAAGAAAATGGCTATTACCGAGCCACGGTCACCCGATTAGACAGCAAGAGTGTGGATGTGTTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
CDS TCA 72 bp GTGCACTTCAGAGCCAGTATCGGTAGCTGTCTAAACTaGGGCAACAACATTCTCACATCACACCAGTCCACA +
Preference number: 6 (lower is better)
Translates to: VHFRASIGSCLN*GNNILTSHQST
Trigger: TGTGGACTGGTGTGATGTGAGAATGTTGTTGCCTCAGTTTAGACAGCTACCGATACTGGCTCTGAAGTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
CDS TCA 72 bp CACAGCAGTCTGGTTTGGTTTTCAAGAAGTTCAGCATaGGGAGAGATGGGTCCGACGTTACCTTCTCTGTGT +
Preference number: 6 (lower is better)
Translates to: HSSLVWFSRSSA*GEMGPTLPSLC
Trigger: ACACAGAGAAGGTAACGTCGGACCCATCTCTCCTCATGCTGAACTTCTTGAAAACCAAACCAGACTGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 72 bp TTTTGCAATAGTCCTCGATGTCACACATCAAGGTTCTaGAGCCTTGCGCGTTCCTCATCAGCTGACACCAGA +
Preference number: 6 (lower is better)
Translates to: FCNSPRCHTSRF*SLARSSSADTR
Trigger: TCTGGTGTCAGCTGATGAGGAACGCGCAAGGCTTCAGAACCTTGATGTGTGACATCGAGGACTATTGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 72 bp CAGTCCCCTTTCATGGTCTGGGTGGTAAGCCCTGCTTaGGAGTTTCCATTGCATGGAAACCTGCTAATCATA +
Preference number: 6 (lower is better)
Translates to: QSPFMVWVVSPA*EFPLHGNLLII
Trigger: TATGATTAGCAGGTTTCCATGCAATGGAAACTCTCAAGCAGGGCTTACCACCCAGACCATGAAAGGGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 72 bp AAGAAAAACCTTTGGTGGTGGCGTCATCCGATGGCATaGAGGGAAGGTCCTTTCCCACTGTTTGGAATACAG +
Preference number: 6 (lower is better)
Translates to: KKNLWWWRHPMA*REGPFPLFGIQ
Trigger: CTGTATTCCAAACAGTGGGAAAGGACCTTCCCTTCATGCCATCGGATGACGCCACCACCAAAGGTTTTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp TCTCCCTTGTTAATGGAAACCCTCCATCATTTTTGTTaGCCACTGAGTCCTGATACGGTGGGACTAGGTTGG +
Preference number: 6 (lower is better)
Translates to: SPLLMETLHHFC*PLSPDTVGLGW
Trigger: CCAACCTAGTCCCACCGTATCAGGACTCAGTGGGCAACAAAAATGATGGAGGGTTTCCATTAACAAGGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp CAAACAGTCCCCTTTCATGGTCTGGGTGGTAAGCCCTaGTTGAGAGTTTCCATTGCATGGAAACCTGCTAAT +
Preference number: 6 (lower is better)
Translates to: QTVPFHGLGGKP*LRVSIAWKPAN
Trigger: ATTAGCAGGTTTCCATGCAATGGAAACTCTCAAGCAGGGCTTACCACCCAGACCATGAAAGGGGACTGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp TGGTTTGGTTTTCAAGAAGTTCAGCATGAGGAGAGATaGGTCCGACGTTACCTTCTCTGTGTCCTGTGCAGT +
Preference number: 6 (lower is better)
Translates to: WFGFQEVQHEER*VRRYLLCVLCS
Trigger: ACTGCACAGGACACAGAGAAGGTAACGTCGGACCCATCTCTCCTCATGCTGAACTTCTTGAAAACCAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp TTATTATTCCTCTATACCAGTTTCCGTCGGTATATCTaGCAAGGCACAAGGTTCCAGGGGCCAAGGTGGATG +
Preference number: 6 (lower is better)
Translates to: LLFLYTSFRRYI*QGTRFQGPRWM
Trigger: CATCCACCTTGGCCCCTGGAACCTTGTGCCTTGCCAGATATACCGACGGAAACTGGTATAGAGGAATAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp TCTCAGGAAGAGCAGAGTCTAGTTTGGTGCCACTCATaGGTGAGCTGGCAAATATGTCTTCTTTCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: SQEEQSLVWCHS*VSWQICLLSSP
Trigger: GGGAGAAGAAAGAAGACATATTTGCCAGCTCACCCATGAGTGGCACCAAACTAGACTCTGCTCTTCCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp CTCCCATTCTTCTCTCAGGAAGAGCAGAGTCTAGTTTaGTGCCACTCATGGGTGAGCTGGCAAATATGTCTT +
Preference number: 6 (lower is better)
Translates to: LPFFSQEEQSLV*CHSWVSWQICL
Trigger: AAGACATATTTGCCAGCTCACCCATGAGTGGCACCAAACTAGACTCTGCTCTTCCTGAGAGAAGAATGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp CCCGTAGAATGTCTTATCTTGTGCTATTTTATGACTTaGCTTCTTGAGGCCAAGGTCAGGACTGGCGAGGCT +
Preference number: 6 (lower is better)
Translates to: PVECLILCYFMT*LLEAKVRTGEA
Trigger: AGCCTCGCCAGTCCTGACCTTGGCCTCAAGAAGCCAAGTCATAAAATAGCACAAGATAAGACATTCTACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp TCAGCCAGGCAACAGGATTGTACTCCGAATGCACTGTaGAGATTAATCCCATCTTCCCCATACAGGGTGACA +
Preference number: 6 (lower is better)
Translates to: SARQQDCTPNAL*RLIPSSPYRVT
Trigger: TGTCACCCTGTATGGGGAAGATGGGATTAATCTCAACAGTGCATTCGGAGTACAATCCTGTTGCCTGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp CTGGCTCTGAAGAAACCAGTCAGCCAGGCAACAGGATaGTACTCCGAATGCACTGTTGAGATTAATCCCATC +
Preference number: 6 (lower is better)
Translates to: LALKKPVSQATG*YSECTVEINPI
Trigger: GATGGGATTAATCTCAACAGTGCATTCGGAGTACAATCCTGTTGCCTGGCTGACTGGTTTCTTCAGAGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp TCTCCCATTCTTCTCTCAGGAAGAGCAGAGTCTAGTTaGGTGCCACTCATGGGTGAGCTGGCAAATATGTCT +
Preference number: 6 (lower is better)
Translates to: SPILLSGRAESS*VPLMGELANMS
Trigger: AGACATATTTGCCAGCTCACCCATGAGTGGCACCAAACTAGACTCTGCTCTTCCTGAGAGAAGAATGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp CCAGGAGCTATTGTCTTTTGTGGGAATTCACAAAACTaGGGAGGCAGATCTCTGCCGCTAGGTTCTCCCATT +
Preference number: 6 (lower is better)
Translates to: PGAIVFCGNSQN*GGRSLPLGSPI
Trigger: AATGGGAGAACCTAGCGGCAGAGATCTGCCTCCCAAGTTTTGTGAATTCCCACAAAAGACAATAGCTCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp ACAGTCCCCTTTCATGGTCTGGGTGGTAAGCCCTGCTaGAGAGTTTCCATTGCATGGAAACCTGCTAATCAT +
Preference number: 6 (lower is better)
Translates to: TVPFHGLGGKPC*RVSIAWKPANH
Trigger: ATGATTAGCAGGTTTCCATGCAATGGAAACTCTCAAGCAGGGCTTACCACCCAGACCATGAAAGGGGACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp AGCTATGACTCCGTGCTCATCTGCGAGGATCACTTCCCAGGTGCCTaGGAATTTAACAAATTCACATCTTATCTGAGCCTCGTCTGTCCT +
Preference number: 6 (lower is better)
Translates to: SYDSVLICEDHFPGA*EFNKFTSYLSLVCP
Trigger: AGGACAGACGAGGCTCAGATAAGATGTGAATTTGTTAAATTCCAAGGCACCTGGGAAGTGATCCTCGCAGATGAGCACGGAGTCATAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp TCCCATTCCAGACATTCTCGGGGCTTACTGTCTCCTCCACACCATTaGAAAGGTTCAAAACCCTTGTTCCTTCTTCGGCTAGTTCGAGAA +
Preference number: 6 (lower is better)
Translates to: SHSRHSRGLLSPPHH*KGSKPLFLLRLVRE
Trigger: TTCTCGAACTAGCCGAAGAAGGAACAAGGGTTTTGAACCTTTCAAATGGTGTGGAGGAGACAGTAAGCCCCGAGAATGTCTGGAATGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp TTTGTAACCAAGGAGCCCGAGCTTCTCGTTGATACTGGCATTGATTaGGACACTGTCGTCATACAGCTCTATAATCAGTCTCCCATCTGG +
Preference number: 6 (lower is better)
Translates to: FVTKEPELLVDTGID*DTVVIQLYNQSPIW
Trigger: CCAGATGGGAGACTGATTATAGAGCTGTATGACGACAGTGTCCAAATCAATGCCAGTATCAACGAGAAGCTCGGGCTCCTTGGTTACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp GTCTTAAAGCCAGGAGCTATTGTCTTTTGTGGGAATTCACAAAACTaGGGAGGCAGATCTCTGCCGCTAGGTTCTCCCATTCTTCTCTCA +
Preference number: 6 (lower is better)
Translates to: VLKPGAIVFCGNSQN*GGRSLPLGSPILLS
Trigger: TGAGAGAAGAATGGGAGAACCTAGCGGCAGAGATCTGCCTCCCAAGTTTTGTGAATTCCCACAAAAGACAATAGCTCCTGGCTTTAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 72 bp ATGTCTTATCTTGTGCTATTTTATGACTTGGCTTCTTaGGGCCAAGGTCAGGACTGGCGAGGCTTCCCTTTC +
Preference number: 6 (lower is better)
Translates to: MSYLVLFYDLAS*GQGQDWRGFPF
Trigger: GAAAGGGAAGCCTCGCCAGTCCTGACCTTGGCCTCAAGAAGCCAAGTCATAAAATAGCACAAGATAAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp AAACCAGTCAGCCAGGCAACAGGATTGTACTCCGAATaGACTGTTGAGATTAATCCCATCTTCCCCATACAG +
Preference number: 6 (lower is better)
Translates to: KPVSQATGLYSE*TVEINPIFPIQ
Trigger: CTGTATGGGGAAGATGGGATTAATCTCAACAGTGCATTCGGAGTACAATCCTGTTGCCTGGCTGACTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp CCATTCTTCTCTCAGGAAGAGCAGAGTCTAGTTTGGTaGCACTCATGGGTGAGCTGGCAAATATGTCTTCTT +
Preference number: 6 (lower is better)
Translates to: PFFSQEEQSLVW*HSWVSWQICLL
Trigger: AAGAAGACATATTTGCCAGCTCACCCATGAGTGGCACCAAACTAGACTCTGCTCTTCCTGAGAGAAGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp GCTAATCATATCTTCAGCTATGACTCCGTGCTCATCTaGGAGGATCACTTCCCAGGTGCCTTGGAATTTAAC +
Preference number: 6 (lower is better)
Translates to: ANHIFSYDSVLI*EDHFPGALEFN
Trigger: GTTAAATTCCAAGGCACCTGGGAAGTGATCCTCGCAGATGAGCACGGAGTCATAGCTGAAGATATGATTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp AGGAGCCCGAGCTTCTCGTTGATACTGGCATTGATTTaGACACTGTCGTCATACAGCTCTATAATCAGTCTC +
Preference number: 6 (lower is better)
Translates to: RSPSFSLILALI*TLSSYSSIISL
Trigger: GAGACTGATTATAGAGCTGTATGACGACAGTGTCCAAATCAATGCCAGTATCAACGAGAAGCTCGGGCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp CACAGAGGTCTTAAAGCCAGGAGCTATTGTCTTTTGTaGGAATTCACAAAACTTGGGAGGCAGATCTCTGCC +
Preference number: 6 (lower is better)
Translates to: HRGLKARSYCLL*EFTKLGRQISA
Trigger: GGCAGAGATCTGCCTCCCAAGTTTTGTGAATTCCCACAAAAGACAATAGCTCCTGGCTTTAAGACCTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CCA 72 bp TTTGGAATACAGCCTCAGAAGGTCTCTTATCTACCTTaGGAATCCCATTCCAGACATTCTCGGGGCTTACTG +
Preference number: 6 (lower is better)
Translates to: FGIQPQKVSYLP*ESHSRHSRGLL
Trigger: CAGTAAGCCCCGAGAATGTCTGGAATGGGATTCCCAAGGTAGATAAGAGACCTTCTGAGGCTGTATTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp TCCGTGCTCATCTGCGAGGATCACTTCCCAGGTGCCTaGGAATTTAACAAATTCACATCTTATCTGAGCCTC +
Preference number: 6 (lower is better)
Translates to: SVLICEDHFPGA*EFNKFTSYLSL
Trigger: GAGGCTCAGATAAGATGTGAATTTGTTAAATTCCAAGGCACCTGGGAAGTGATCCTCGCAGATGAGCACGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp AGACATTCTCGGGGCTTACTGTCTCCTCCACACCATTaGAAAGGTTCAAAACCCTTGTTCCTTCTTCGGCTA +
Preference number: 6 (lower is better)
Translates to: RHSRGLLSPPHH*KGSKPLFLLRL
Trigger: TAGCCGAAGAAGGAACAAGGGTTTTGAACCTTTCAAATGGTGTGGAGGAGACAGTAAGCCCCGAGAATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp GTTTGGAATACAGCCTCAGAAGGTCTCTTATCTACCTaGGGAATCCCATTCCAGACATTCTCGGGGCTTACT +
Preference number: 6 (lower is better)
Translates to: VWNTASEGLLST*GIPFQTFSGLT
Trigger: AGTAAGCCCCGAGAATGTCTGGAATGGGATTCCCAAGGTAGATAAGAGACCTTCTGAGGCTGTATTCCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp ATCCGATGGCATGAAGGGAAGGTCCTTTCCCACTGTTaGGAATACAGCCTCAGAAGGTCTCTTATCTACCTT +
Preference number: 6 (lower is better)
Translates to: IRWHEGKVLSHC*EYSLRRSLIYL
Trigger: AAGGTAGATAAGAGACCTTCTGAGGCTGTATTCCAAACAGTGGGAAAGGACCTTCCCTTCATGCCATCGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp GCTGAGCCCTGTAAATATCTGAGCTCCTTACATGCTGGACCCATCTaGGGTTTGCAAGATTCACCCATAATCTCTACACTGTGTGCTTTA +
Preference number: 6 (lower is better)
Translates to: AEPCKYLSSLHAGPI*GLQDSPIISTLCAL
Trigger: TAAAGCACACAGTGTAGAGATTATGGGTGAATCTTGCAAACCCAAGATGGGTCCAGCATGTAAGGAGCTCAGATATTTACAGGGCTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp ATGAGAAACATACACAGAGGTCTTAAAGCCAGGAGCTATTGTCTTTaGTGGGAATTCACAAAACTTGGGAGGCAGATCTCTGCCGCTAGG +
Preference number: 6 (lower is better)
Translates to: MRNIHRGLKARSYCL*WEFTKLGRQISAAR
Trigger: CCTAGCGGCAGAGATCTGCCTCCCAAGTTTTGTGAATTCCCACAAAAGACAATAGCTCCTGGCTTTAAGACCTCTGTGTATGTTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 72 bp TTGGTTTCAAACTCCTGGAACTTGGCAAAGCCAGCTTaGGCGATGACCTTACTAATGTTTTCCTCCCCCATT +
Preference number: 6 (lower is better)
Translates to: LVSNSWNLAKPA*AMTLLMFSSPI
Trigger: AATGGGGGAGGAAAACATTAGTAAGGTCATCGCTCAAGCTGGCTTTGCCAAGTTCCAGGAGTTTGAAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
CDS CCA 72 bp TATATCTGGCAAGGCACAAGGTTCCAGGGGCCAAGGTaGATGCTTTTAGATTCAGTAAGGCTTTACTTAGCT +
Preference number: 6 (lower is better)
Translates to: YIWQGTRFQGPR*MLLDSVRLYLA
Trigger: AGCTAAGTAAAGCCTTACTGAATCTAAAAGCATCCACCTTGGCCCCTGGAACCTTGTGCCTTGCCAGATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp TTTGGTTTCAAACTCCTGGAACTTGGCAAAGCCAGCTaGAGCGATGACCTTACTAATGTTTTCCTCCCCCAT +
Preference number: 6 (lower is better)
Translates to: FGFKLLELGKAS*SDDLTNVFLPH
Trigger: ATGGGGGAGGAAAACATTAGTAAGGTCATCGCTCAAGCTGGCTTTGCCAAGTTCCAGGAGTTTGAAACCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
CDS CAA 72 bp AAGGAGCCCGAGCTTCTCGTTGATACTGGCATTGATTaGGACACTGTCGTCATACAGCTCTATAATCAGTCT +
Preference number: 6 (lower is better)
Translates to: KEPELLVDTGID*DTVVIQLYNQS
Trigger: AGACTGATTATAGAGCTGTATGACGACAGTGTCCAAATCAATGCCAGTATCAACGAGAAGCTCGGGCTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp GGCCGTGTTCTGACATCATTTAGTCTCTCTGAGAGGTaGTTGATCTCAGCTTCATCTTCTATCAGCTGGATG +
Preference number: 6 (lower is better)
Translates to: GRVLTSFSLSER*LISASSSISWM
Trigger: CATCCAGCTGATAGAAGATGAAGCTGAGATCAACAACCTCTCAGAGAGACTAAATGATGTCAGAACACGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp ATGCTACCTTCTAGCCTCTCAGAACCCATTTTACCTTaGCATGAGTTCTCGAAAGCGTTGAAGATGCTACGG +
Preference number: 6 (lower is better)
Translates to: MLPSSLSEPILP*HEFSKALKMLR
Trigger: CCGTAGCATCTTCAACGCTTTCGAGAACTCATGCAAAGGTAAAATGGGTTCTGAGAGGCTAGAAGGTAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp CCCTGTAAATATCTGAGCTCCTTACATGCTGGACCCATCTTGGGTTaGCAAGATTCACCCATAATCTCTACACTGTGTGCTTTACTCTCT +
Preference number: 6 (lower is better)
Translates to: PCKYLSSLHAGPILG*QDSPIISTLCALLS
Trigger: AGAGAGTAAAGCACACAGTGTAGAGATTATGGGTGAATCTTGCAAACCCAAGATGGGTCCAGCATGTAAGGAGCTCAGATATTTACAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp TTTGCTTTGGGGTTATACCAGTTAAGAAGCACTGAGGTATCAGCGTaGGGTTTGTTAGCTATCTTCAAACAGTCCCCTTTCATGGTCTGG +
Preference number: 6 (lower is better)
Translates to: FALGLYQLRSTEVSA*GLLAIFKQSPFMVW
Trigger: CCAGACCATGAAAGGGGACTGTTTGAAGATAGCTAACAAACCCAACGCTGATACCTCAGTGCTTCTTAACTGGTATAACCCCAAAGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp TATCAAACTTGGCTCTGTCCACGAAGTGGTAATCCATaGTACCTTCTAGCCTCTCAGAACCCATTTTACCTT +
Preference number: 6 (lower is better)
Translates to: YQTWLCPRSGNP*YLLASQNPFYL
Trigger: AAGGTAAAATGGGTTCTGAGAGGCTAGAAGGTAGCATGGATTACCACTTCGTGGACAGAGCCAAGTTTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp CCCCATTCTGGATTCATCCAGGATCTCTATGACATATaGGTGATCCTGCTTATCAAGAACATGGACCACCAA +
Preference number: 6 (lower is better)
Translates to: PHSGFIQDLYDI*VILLIKNMDHQ
Trigger: TTGGTGGTCCATGTTCTTGATAAGCAGGATCACCAATATGTCATAGAGATCCTGGATGAATCCAGAATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
CDS CAA 72 bp GGGTTATACCAGTTAAGAAGCACTGAGGTATCAGCGTaGGGTTTGTTAGCTATCTTCAAACAGTCCCCTTTC +
Preference number: 6 (lower is better)
Translates to: GLYQLRSTEVSA*GLLAIFKQSPF
Trigger: GAAAGGGGACTGTTTGAAGATAGCTAACAAACCCAACGCTGATACCTCAGTGCTTCTTAACTGGTATAACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp GTTTTCCTCCCCCATTCTGGATTCATCCAGGATCTCTATGACATATaGGTGATCCTGCTTATCAAGAACATGGACCACCAATTCTTTGTG +
Preference number: 6 (lower is better)
Translates to: VFLPHSGFIQDLYDI*VILLIKNMDHQFFV
Trigger: CACAAAGAATTGGTGGTCCATGTTCTTGATAAGCAGGATCACCAATATGTCATAGAGATCCTGGATGAATCCAGAATGGGGGAGGAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
CDS CAA 90 bp ACAGGGGAGTGCTGTAACTCAATGGATTCCAGTTCTAAGAATTCTTaGCATTCATCGTCATTGTCAGCAGAGAGTGGTACCTCTAGTGAA +
Preference number: 6 (lower is better)
Translates to: TGECCNSMDSSSKNS*HSSSLSAESGTSSE
Trigger: TTCACTAGAGGTACCACTCTCTGCTGACAATGACGATGAATGCAAAGAATTCTTAGAACTGGAATCCATTGAGTTACAGCACTCCCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp AAAGCAAACACTGTGCATTTTAATTCTAAGTTATTCTaGCGAGCGCTATCGATGAACCCGCTGAAAGCCTGT +
Preference number: 6 (lower is better)
Translates to: KANTVHFNSKLF*RALSMNPLKAC
Trigger: ACAGGCTTTCAGCGGGTTCATCGATAGCGCTCGGCAGAATAACTTAGAATTAAAATGCACAGTGTTTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp AAAGCTTCTGAAACAGAGAGGGTTTTATTATCTTTTTaGGCTCTCTGGTCTCCTTCGGCCTTCTTGGCAGAA +
Preference number: 6 (lower is better)
Translates to: KASETERVLLSF*ALWSPSAFLAE
Trigger: TTCTGCCAAGAAGGCCGAAGGAGACCAGAGAGCCAAAAAAGATAATAAAACCCTCTCTGTTTCAGAAGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
CDS CAA 72 bp TGTAAATATCTGAGCTCCTTACATGCTGGACCCATCTaGGGTTTGCAAGATTCACCCATAATCTCTACACTG +
Preference number: 6 (lower is better)
Translates to: CKYLSSLHAGPI*GLQDSPIISTL
Trigger: CAGTGTAGAGATTATGGGTGAATCTTGCAAACCCAAGATGGGTCCAGCATGTAAGGAGCTCAGATATTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 72 bp CAGTTTTGCTTTGGGGTTATACCAGTTAAGAAGCACTaGGGTATCAGCGTTGGGTTTGTTAGCTATCTTCAA +
Preference number: 6 (lower is better)
Translates to: QFCFGVIPVKKH*GISVGFVSYLQ
Trigger: TTGAAGATAGCTAACAAACCCAACGCTGATACCTCAGTGCTTCTTAACTGGTATAACCCCAAAGCAAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp TGCTGTAACTCAATGGATTCCAGTTCTAAGAATTCTTaGCATTCATCGTCATTGTCAGCAGAGAGTGGTACC +
Preference number: 6 (lower is better)
Translates to: CCNSMDSSSKNS*HSSSLSAESGT
Trigger: GGTACCACTCTCTGCTGACAATGACGATGAATGCAAAGAATTCTTAGAACTGGAATCCATTGAGTTACAGCA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp GTGGATGCTTTTAGATTCAGTAAGGCTTTACTTAGCTGCATGATGTaGTACGACAGTTGTTCTAAAACGTTTGTATTTCTCGCGAGCTGG +
Preference number: 6 (lower is better)
Translates to: VDAFRFSKALLSCMM*YDSCSKTFVFLASW
Trigger: CCAGCTCGCGAGAAATACAAACGTTTTAGAACAACTGTCGTACAACATCATGCAGCTAAGTAAAGCCTTACTGAATCTAAAAGCATCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 90 bp AACTCAATGGATTCCAGTTCTAAGAATTCTTTGCATTCATCGTCATaGTCAGCAGAGAGTGGTACCTCTAGTGAACTCAGTTCCAGTAAC +
Preference number: 6 (lower is better)
Translates to: NSMDSSSKNSLHSSS*SAESGTSSELSSSN
Trigger: GTTACTGGAACTGAGTTCACTAGAGGTACCACTCTCTGCTGACAATGACGATGAATGCAAAGAATTCTTAGAACTGGAATCCATTGAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp TCATACAGCTCTATAATCAGTCTCCCATCTGGGTCTTaGGCTACAACTAAAGCCTTCAGTGACTTATCTAAA +
Preference number: 6 (lower is better)
Translates to: SYSSIISLPSGS*ATTKAFSDLSK
Trigger: TTTAGATAAGTCACTGAAGGCTTTAGTTGTAGCCAAAGACCCAGATGGGAGACTGATTATAGAGCTGTATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 72 bp CTCAGCTTCATCTTCTATCAGCTGGATGTAAAAATCTaGAAGGTCGTTAATATGAGAAACATACACAGAGGT +
Preference number: 6 (lower is better)
Translates to: LSFIFYQLDVKI*KVVNMRNIHRG
Trigger: ACCTCTGTGTATGTTTCTCATATTAACGACCTTTCAGATTTTTACATCCAGCTGATAGAAGATGAAGCTGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS GCA 72 bp GTGGATGCTTTTAGATTCAGTAAGGCTTTACTTAGCTaGATGATGTTGTACGACAGTTGTTCTAAAACGTTT +
Preference number: 6 (lower is better)
Translates to: VDAFRFSKALLS*MMLYDSCSKTF
Trigger: AAACGTTTTAGAACAACTGTCGTACAACATCATGCAGCTAAGTAAAGCCTTACTGAATCTAAAAGCATCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS TCA 72 bp ATGCTTTTAGATTCAGTAAGGCTTTACTTAGCTGCATaGTGTTGTACGACAGTTGTTCTAAAACGTTTGTAT +
Preference number: 6 (lower is better)
Translates to: MLLDSVRLYLAA*CCTTVVLKRLY
Trigger: ATACAAACGTTTTAGAACAACTGTCGTACAACATCATGCAGCTAAGTAAAGCCTTACTGAATCTAAAAGCAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2
CDS CAA 72 bp TTTAGATTCAGTAAGGCTTTACTTAGCTGCATGATGTaGTACGACAGTTGTTCTAAAACGTTTGTATTTCTC +
Preference number: 6 (lower is better)
Translates to: FRFSKALLSCMM*YDSCSKTFVFL
Trigger: GAGAAATACAAACGTTTTAGAACAACTGTCGTACAACATCATGCAGCTAAGTAAAGCCTTACTGAATCTAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000045717.7
ENSMUST00000168073.9
ENSMUST00000233077.2