Pregenerated sensors for TDRD5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060985Ensembl transcript IDs: ENSMUST00000121146.10, ENSMUST00000141760.4, ENSMUST00000167528.9
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAAGCTTCCCTCCTTTCACACTGGGGTACCAGTGCAGGAGGCTCCTaGACGTGGCTAACCGTGCCGCAGCTCCCAAGACAGCTGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: QASLLSHWGTSAGGS*TWLTVPQLPRQLWL Trigger: CAGCCACAGCTGTCTTGGGAGCTGCGGCACGGTTAGCCACGTCCAGGAGCCTCCTGCACTGGTACCCCAGTGTGAAAGGAGGGAAGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS GCA 90 bp | TCTCTCTCTGCCTCAAGCTTCCCTCCTTTCACACTGGGGTACCAGTaGAGGAGGCTCCTGGACGTGGCTAACCGTGCCGCAGCTCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: SLSASSFPPFTLGYQ*RRLLDVANRAAAPK Trigger: CTTGGGAGCTGCGGCACGGTTAGCCACGTCCAGGAGCCTCCTGCACTGGTACCCCAGTGTGAAAGGAGGGAAGCTTGAGGCAGAGAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CCA 90 bp | TCCCTCCTTTCACACTGGGGTACCAGTGCAGGAGGCTCCTGGACGTaGCTAACCGTGCCGCAGCTCCCAAGACAGCTGTGGCTGTACTTC | + |
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Preference number: 5 (lower is better) Translates to: SLLSHWGTSAGGSWT*LTVPQLPRQLWLYF Trigger: GAAGTACAGCCACAGCTGTCTTGGGAGCTGCGGCACGGTTAGCCACGTCCAGGAGCCTCCTGCACTGGTACCCCAGTGTGAAAGGAGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS GCA 90 bp | GAATTGGGGGCACCCTTCCTCGGTAAGGCACCCGGCCAGAGCATATaGTGGGTCTTCCCTTTGGCATGGAGTTTCGGACCTTATGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: ELGAPFLGKAPGQSI*WVFPLAWSFGPYGS Trigger: GGAGCCATAAGGTCCGAAACTCCATGCCAAAGGGAAGACCCAGCATATGCTCTGGCCGGGTGCCTTACCGAGGAAGGGTGCCCCCAATTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
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| CDS CCA 90 bp | TTGGGGGCACCCTTCCTCGGTAAGGCACCCGGCCAGAGCATATGCTaGGTCTTCCCTTTGGCATGGAGTTTCGGACCTTATGGCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: LGAPFLGKAPGQSIC*VFPLAWSFGPYGSF Trigger: GAAGGAGCCATAAGGTCCGAAACTCCATGCCAAAGGGAAGACCCAGCATATGCTCTGGCCGGGTGCCTTACCGAGGAAGGGTGCCCCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
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| CDS GCA 90 bp | ACAGCGTCTGGTGGGATATCGTGGTTTGCCACTGACAGGCTGAGCTaGGGTTTGTTTGTTTCTACCTGCAGCTGCAGAGGCTTGACCACC | + |
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Preference number: 5 (lower is better) Translates to: TASGGISWFATDRLS*GLFVSTCSCRGLTT Trigger: GGTGGTCAAGCCTCTGCAGCTGCAGGTAGAAACAAACAAACCGCAGCTCAGCCTGTCAGTGGCAAACCACGATATCCCACCAGACGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CCA 90 bp | TCCTCGGTAAGGCACCCGGCCAGAGCATATGCTGGGTCTTCCCTTTaGCATGGAGTTTCGGACCTTATGGCTCCTTCTCTGCTTTGCAAC | + |
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Preference number: 5 (lower is better) Translates to: SSVRHPARAYAGSSL*HGVSDLMAPSLLCN Trigger: GTTGCAAAGCAGAGAAGGAGCCATAAGGTCCGAAACTCCATGCCAAAGGGAAGACCCAGCATATGCTCTGGCCGGGTGCCTTACCGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
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| CDS TCA 90 bp | TTTCTTGGCACGCACAGCGTCTGGTGGGATATCGTGGTTTGCCACTaGCAGGCTGAGCTGCGGTTTGTTTGTTTCTACCTGCAGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: FLGTHSVWWDIVVCH*QAELRFVCFYLQLQ Trigger: CTGCAGCTGCAGGTAGAAACAAACAAACCGCAGCTCAGCCTGTCAGTGGCAAACCACGATATCCCACCAGACGCTGTGCGTGCCAAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CCA 90 bp | GGTAAGGCACCCGGCCAGAGCATATGCTGGGTCTTCCCTTTGGCATaGAGTTTCGGACCTTATGGCTCCTTCTCTGCTTTGCAACCAAAC | + |
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Preference number: 5 (lower is better) Translates to: GKAPGQSICWVFPLA*SFGPYGSFSALQPN Trigger: GTTTGGTTGCAAAGCAGAGAAGGAGCCATAAGGTCCGAAACTCCATGCCAAAGGGAAGACCCAGCATATGCTCTGGCCGGGTGCCTTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
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| CDS CCA 90 bp | TACTCATCCACCACCCCCACCAATGGCTTCAAACCACACAGCTTCTaGAAGTGCAAAATAGCTCTGGCTGTCCAGTGTTCCTCTGCGGGC | + |
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Preference number: 5 (lower is better) Translates to: YSSTTPTNGFKPHSF*KCKIALAVQCSSAG Trigger: GCCCGCAGAGGAACACTGGACAGCCAGAGCTATTTTGCACTTCCAGAAGCTGTGTGGTTTGAAGCCATTGGTGGGGGTGGTGGATGAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CCA 90 bp | GTGTGCCTTCATTACTGGGAATCTCTTCACTACAGCTGGAAGAATTaGGGGCACCCTTCCTCGGTAAGGCACCCGGCCAGAGCATATGCT | + |
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Preference number: 5 (lower is better) Translates to: VCLHYWESLHYSWKN*GHPSSVRHPARAYA Trigger: AGCATATGCTCTGGCCGGGTGCCTTACCGAGGAAGGGTGCCCCCAATTCTTCCAGCTGTAGTGAAGAGATTCCCAGTAATGAAGGCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141760.4 |
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| CDS TCA 90 bp | TGCTGGCAGGTTCAGACTGGCTCCTCTCTGCGGACTGCTGAGACTTaGTCAGAGAGATGTAGAACTCTTCCAGTTTGGGCAGTGTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: CWQVQTGSSLRTAET*SERCRTLPVWAVWK Trigger: CTTCCACACTGCCCAAACTGGAAGAGTTCTACATCTCTCTGATCAAGTCTCAGCAGTCCGCAGAGAGGAGCCAGTCTGAACCTGCCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS GCA 90 bp | TCCGGCATGAGTCTGAATGCTGGCAGGTTCAGACTGGCTCCTCTCTaGGGACTGCTGAGACTTGATCAGAGAGATGTAGAACTCTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: SGMSLNAGRFRLAPL*GLLRLDQRDVELFQ Trigger: CTGGAAGAGTTCTACATCTCTCTGATCAAGTCTCAGCAGTCCGCAGAGAGGAGCCAGTCTGAACCTGCCAGCATTCAGACTCATGCCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS GCA 90 bp | CCAGTAGGGACCTCATCCTCATTTTCTTCCTTCAGATCCTTGGGCTaGAGGATGGACCACCGTGGGTCCTCTTCACAGCTCTTATGTGTT | + |
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Preference number: 5 (lower is better) Translates to: PVGTSSSFSSFRSLG*RMDHRGSSSQLLCV Trigger: AACACATAAGAGCTGTGAAGAGGACCCACGGTGGTCCATCCTGCAGCCCAAGGATCTGAAGGAAGAAAATGAGGATGAGGTCCCTACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CCA 90 bp | AGTCTGCACAATTTCTTGGCACGCACAGCGTCTGGTGGGATATCGTaGTTTGCCACTGACAGGCTGAGCTGCGGTTTGTTTGTTTCTACC | + |
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Preference number: 5 (lower is better) Translates to: SLHNFLARTASGGIS*FATDRLSCGLFVST Trigger: GGTAGAAACAAACAAACCGCAGCTCAGCCTGTCAGTGGCAAACCACGATATCCCACCAGACGCTGTGCGTGCCAAGAAATTGTGCAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CCA 90 bp | TCTTCTTTCTTTAGGCTCCCTGGAGAGCTTTCCACAGAGCCAGAGTaGTTTTCTGGAGAGTCACCCACTGCAGGGGTTGAACTGAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: SSFFRLPGELSTEPE*FSGESPTAGVELSA Trigger: AGCACTCAGTTCAACCCCTGCAGTGGGTGACTCTCCAGAAAACCACTCTGGCTCTGTGGAAAGCTCTCCAGGGAGCCTAAAGAAAGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS GCA 90 bp | CCAGACGGCAGAGGCTTCAGGTCAGCATCAAACACGAGCAAGTCTTaGCTTTCTTCACTGAACTCAACTCGGAGAATGTCACTAAGAGCG | + |
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Preference number: 5 (lower is better) Translates to: PDGRGFRSASNTSKS*LSSLNSTRRMSLRA Trigger: CGCTCTTAGTGACATTCTCCGAGTTGAGTTCAGTGAAGAAAGGCAAGACTTGCTCGTGTTTGATGCTGACCTGAAGCCTCTGCCGTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CCA 90 bp | GTTAGTGTACAGAGCTGGTGGGTTGAAATCCCTGAAGCCCTTGGATaGGGCATTTTCTCGGCATACAATAGCATGGCCTTCTGTCCTCAA | + |
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Preference number: 5 (lower is better) Translates to: VSVQSWWVEIPEALG*GIFSAYNSMAFCPQ Trigger: TTGAGGACAGAAGGCCATGCTATTGTATGCCGAGAAAATGCCCCATCCAAGGGCTTCAGGGATTTCAACCCACCAGCTCTGTACACTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CCA 90 bp | GGACCTCATCCTCATTTTCTTCCTTCAGATCCTTGGGCTGCAGGATaGACCACCGTGGGTCCTCTTCACAGCTCTTATGTGTTTTCAATG | + |
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Preference number: 5 (lower is better) Translates to: GPHPHFLPSDPWAAG*TTVGPLHSSYVFSM Trigger: CATTGAAAACACATAAGAGCTGTGAAGAGGACCCACGGTGGTCCATCCTGCAGCCCAAGGATCTGAAGGAAGAAAATGAGGATGAGGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CCA 90 bp | AAATGGCTGAGTAAAAACTTTACTCTTCACTACAGCTGGAAGAATTaGGGGCACCCTTCCTCGGTAAGGCACCCGGCCAGAGCATATGCT | + |
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Preference number: 5 (lower is better) Translates to: KWLSKNFTLHYSWKN*GHPSSVRHPARAYA Trigger: AGCATATGCTCTGGCCGGGTGCCTTACCGAGGAAGGGTGCCCCCAATTCTTCCAGCTGTAGTGAAGAGTAAAGTTTTTACTCAGCCATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167528.9 |
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| CDS CCA 90 bp | ACCAGTTCCATAGTGGACCGATATCCAAGGATTCGGAGCGGGAGATaGTTGCCAACCATCAAAAGGTACTCCTTTTCCAACTGTTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: TSSIVDRYPRIRSGR*LPTIKRYSFSNCCG Trigger: TCCACAACAGTTGGAAAAGGAGTACCTTTTGATGGTTGGCAACCATCTCCCGCTCCGAATCCTTGGATATCGGTCCACTATGGAACTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
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| CDS CCA 90 bp | GAGCATATGCTGGGTCTTCCCTTTGGCATGGAGTTTCGGACCTTATaGCTCCTTCTCTGCTTTGCAACCAAACTTGCTATTCCTTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: EHMLGLPFGMEFRTL*LLLCFATKLAIPLV Trigger: CACCAAAGGAATAGCAAGTTTGGTTGCAAAGCAGAGAAGGAGCCATAAGGTCCGAAACTCCATGCCAAAGGGAAGACCCAGCATATGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
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| CDS TCA 90 bp | TGCCATTTCTCCACCTGTCTGATATTGTTTCTTCCCAACAAGGTTTaGAGTAAACAGCTGGGAGGCAGGACTCCCTGCCTTCCCCATTTT | + |
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Preference number: 5 (lower is better) Translates to: CHFSTCLILFLPNKV*SKQLGGRTPCLPHF Trigger: AAAATGGGGAAGGCAGGGAGTCCTGCCTCCCAGCTGTTTACTTCAAACCTTGTTGGGAAGAAACAATATCAGACAGGTGGAGAAATGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CCA 90 bp | GAACCTCAGCGAGGACTTCTGCACAGTTCCGATATTTCCGAAATCTaGGTAGAACACTTCCACTTCCTTTTTCCCAAGGATCCGATGGAT | + |
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Preference number: 5 (lower is better) Translates to: EPQRGLLHSSDISEI*VEHFHFLFPKDPMD Trigger: ATCCATCGGATCCTTGGGAAAAAGGAAGTGGAAGTGTTCTACCCAGATTTCGGAAATATCGGAACTGTGCAGAAGTCCTCGCTGAGGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CCA 90 bp | TATGGCTCCTTCTCTGCTTTGCAACCAAACTTGCTATTCCTTTGGTaGATTCGTCTGGAATGGCTTTCAGTATTACGGTACCATCCCCAC | + |
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Preference number: 5 (lower is better) Translates to: YGSFSALQPNLLFLW*IRLEWLSVLRYHPH Trigger: GTGGGGATGGTACCGTAATACTGAAAGCCATTCCAGACGAATCCACCAAAGGAATAGCAAGTTTGGTTGCAAAGCAGAGAAGGAGCCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
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| CDS CCA 90 bp | CCTTATGGCTCCTTCTCTGCTTTGCAACCAAACTTGCTATTCCTTTaGTGGATTCGTCTGGAATGGCTTTCAGTATTACGGTACCATCCC | + |
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Preference number: 5 (lower is better) Translates to: PYGSFSALQPNLLFL*WIRLEWLSVLRYHP Trigger: GGGATGGTACCGTAATACTGAAAGCCATTCCAGACGAATCCACCAAAGGAATAGCAAGTTTGGTTGCAAAGCAGAGAAGGAGCCATAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
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| CDS GCA 90 bp | GGAGTTTCGGACCTTATGGCTCCTTCTCTGCTTTGCAACCAAACTTaGTATTCCTTTGGTGGATTCGTCTGGAATGGCTTTCAGTATTAC | + |
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Preference number: 5 (lower is better) Translates to: GVSDLMAPSLLCNQT*YSFGGFVWNGFQYY Trigger: GTAATACTGAAAGCCATTCCAGACGAATCCACCAAAGGAATAGCAAGTTTGGTTGCAAAGCAGAGAAGGAGCCATAAGGTCCGAAACTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
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| CDS CCA 90 bp | ACCACCAGATTAGGCTTCTTGTATATCTTCTGTTCTGGCTCCTTCTaGTTCTTCAAAGGGCAATCCCACGTGGTCTTCTTAACTGCTACA | + |
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Preference number: 5 (lower is better) Translates to: TTRLGFLYIFCSGSF*FFKGQSHVVFLTAT Trigger: TGTAGCAGTTAAGAAGACCACGTGGGATTGCCCTTTGAAGAACCAGAAGGAGCCAGAACAGAAGATATACAAGAAGCCTAATCTGGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CCA 90 bp | AATATTAAGGATTCCGTCTATATACTCATCCACCACCCCCACCAATaGCTTCAAACCACACAGCTTCTGGAAGTGCAAAATAGCTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: NIKDSVYILIHHPHQ*LQTTQLLEVQNSSG Trigger: GCCAGAGCTATTTTGCACTTCCAGAAGCTGTGTGGTTTGAAGCCATTGGTGGGGGTGGTGGATGAGTATATAGACGGAATCCTTAATATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS TCA 90 bp | GGGAATCCTGTAGAATATGACCCCTGTTGTTTCATTCTAAATGGCTaGGTAAAAACTTTACCTGCTGGCCATCCTCTCTGCTTGTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: GNPVEYDPCCFILNG*VKTLPAGHPLCLSS Trigger: AGAGGACAAGCAGAGAGGATGGCCAGCAGGTAAAGTTTTTACTCAGCCATTTAGAATGAAACAACAGGGGTCATATTCTACAGGATTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121146.10 |
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| CDS GCA 90 bp | CAGAGAACCTGCTCTGGTCTGCTCTACAGAAATGACATCCGAAGCTaGATTCAGCACTTCAAACATAGAGAGGAATCCATACTGCATATA | + |
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Preference number: 5 (lower is better) Translates to: QRTCSGLLYRNDIRS*IQHFKHREESILHI Trigger: TATATGCAGTATGGATTCCTCTCTATGTTTGAAGTGCTGAATGCAGCTTCGGATGTCATTTCTGTAGAGCAGACCAGAGCAGGTTCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121146.10 |
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| CDS CCA 90 bp | AGAGATCTTTACACAACAGAGATGTCCTGGTTGTATAAAATATTCTaGCATAATGTACCGGTCAGAGACCAGCTGGTTGGAGTAGCAGCG | + |
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Preference number: 5 (lower is better) Translates to: RDLYTTEMSWLYKIF*HNVPVRDQLVGVAA Trigger: CGCTGCTACTCCAACCAGCTGGTCTCTGACCGGTACATTATGCCAGAATATTTTATACAACCAGGACATCTCTGTTGTGTAAAGATCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CCA 90 bp | GAGATGGTTGCCAACCATCAAAAGGTACTCCTTTTCCAACTGTTGTaGAGTCAAACCATCCTTAGTGGAAATAAGAAGGGACCTTATCTC | + |
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Preference number: 5 (lower is better) Translates to: EMVANHQKVLLFQLL*SQTILSGNKKGPYL Trigger: GAGATAAGGTCCCTTCTTATTTCCACTAAGGATGGTTTGACTCCACAACAGTTGGAAAAGGAGTACCTTTTGATGGTTGGCAACCATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
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| CDS CCA 90 bp | AGAGGAATCCATACTGCATATACTGAAATGATCGTCCAAAACGCCTaGCAAATGCCTTTTCAAAGTCAGAAAGGAGAACGGGAGACAATG | + |
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Preference number: 5 (lower is better) Translates to: RGIHTAYTEMIVQNA*QMPFQSQKGERETM Trigger: CATTGTCTCCCGTTCTCCTTTCTGACTTTGAAAAGGCATTTGCCAGGCGTTTTGGACGATCATTTCAGTATATGCAGTATGGATTCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121146.10 |
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| CDS CCA 90 bp | GTACCACCACTTGTCCTCAGAGATCTTTACACAACAGAGATGTCCTaGTTGTATAAAATATTCTGGCATAATGTACCGGTCAGAGACCAG | + |
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Preference number: 5 (lower is better) Translates to: VPPLVLRDLYTTEMS*LYKIFWHNVPVRDQ Trigger: CTGGTCTCTGACCGGTACATTATGCCAGAATATTTTATACAACCAGGACATCTCTGTTGTGTAAAGATCTCTGAGGACAAGTGGTGGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS TCA 90 bp | GATGTAGAAAAACACCAGTCCTTTTGTGCCATTTCTCCACCTGTCTaGTATTGTTTCTTCCCAACAAGGTTTGAAGTAAACAGCTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: DVEKHQSFCAISPPV*YCFFPTRFEVNSWE Trigger: CTCCCAGCTGTTTACTTCAAACCTTGTTGGGAAGAAACAATATCAGACAGGTGGAGAAATGGCACAAAAGGACTGGTGTTTTTCTACATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS TCA 90 bp | GCATTCAGCACTTCAAACATAGAGAGGAATCCATACTGCATATACTaGAATGATCGTCCAAAACGCCTGGCAAATGCCTTTTCAAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: AFSTSNIERNPYCIY*NDRPKRLANAFSKS Trigger: TGACTTTGAAAAGGCATTTGCCAGGCGTTTTGGACGATCATTTCAGTATATGCAGTATGGATTCCTCTCTATGTTTGAAGTGCTGAATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121146.10 |
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| CDS CCA 72 bp | TCACACTGGGGTACCAGTGCAGGAGGCTCCTGGACGTaGCTAACCGTGCCGCAGCTCCCAAGACAGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: SHWGTSAGGSWT*LTVPQLPRQLW Trigger: CCACAGCTGTCTTGGGAGCTGCGGCACGGTTAGCCACGTCCAGGAGCCTCCTGCACTGGTACCCCAGTGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS GCA 72 bp | GCCTCAAGCTTCCCTCCTTTCACACTGGGGTACCAGTaGAGGAGGCTCCTGGACGTGGCTAACCGTGCCGCA | + |
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Preference number: 6 (lower is better) Translates to: ASSFPPFTLGYQ*RRLLDVANRAA Trigger: TGCGGCACGGTTAGCCACGTCCAGGAGCCTCCTGCACTGGTACCCCAGTGTGAAAGGAGGGAAGCTTGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS GCA 72 bp | GCACCCTTCCTCGGTAAGGCACCCGGCCAGAGCATATaGTGGGTCTTCCCTTTGGCATGGAGTTTCGGACCT | + |
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Preference number: 6 (lower is better) Translates to: APFLGKAPGQSI*WVFPLAWSFGP Trigger: AGGTCCGAAACTCCATGCCAAAGGGAAGACCCAGCATATGCTCTGGCCGGGTGCCTTACCGAGGAAGGGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
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| CDS GCA 72 bp | GTGCTTTTGAGGCTGCCCGTCCGGCATGAGTCTGAATaGTGGCAGGTTCAGACTGGCTCCTCTCTGCGGACT | + |
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Preference number: 6 (lower is better) Translates to: VLLRLPVRHESE*WQVQTGSSLRT Trigger: AGTCCGCAGAGAGGAGCCAGTCTGAACCTGCCAGCATTCAGACTCATGCCGGACGGGCAGCCTCAAAAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CCA 72 bp | CTTTTGAGGCTGCCCGTCCGGCATGAGTCTGAATGCTaGCAGGTTCAGACTGGCTCCTCTCTGCGGACTGCT | + |
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Preference number: 6 (lower is better) Translates to: LLRLPVRHESEC*QVQTGSSLRTA Trigger: AGCAGTCCGCAGAGAGGAGCCAGTCTGAACCTGCCAGCATTCAGACTCATGCCGGACGGGCAGCCTCAAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CCA 72 bp | CCCTTCCTCGGTAAGGCACCCGGCCAGAGCATATGCTaGGTCTTCCCTTTGGCATGGAGTTTCGGACCTTAT | + |
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Preference number: 6 (lower is better) Translates to: PFLGKAPGQSIC*VFPLAWSFGPY Trigger: ATAAGGTCCGAAACTCCATGCCAAAGGGAAGACCCAGCATATGCTCTGGCCGGGTGCCTTACCGAGGAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
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| CDS CAA 72 bp | GGTCTTTCAACTCACTCTTCACTACAGCTGGAAGAATaGGGGGCACCCTTCCTCGGTAAGGCACCCGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GLSTHSSLQLEE*GAPFLGKAPGQ Trigger: CTGGCCGGGTGCCTTACCGAGGAAGGGTGCCCCCAATTCTTCCAGCTGTAGTGAAGAGTGAGTTGAAAGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121146.10 |
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| CDS CAA 72 bp | AACAGCTGGGAGGCAGGACTCCCTGCCTTCCCCATTTaGGCCTGTAGAGGGAGCCAGTTCTCATCCCAAACA | + |
|
Preference number: 6 (lower is better) Translates to: NSWEAGLPAFPI*ACRGSQFSSQT Trigger: TGTTTGGGATGAGAACTGGCTCCCTCTACAGGCCAAAATGGGGAAGGCAGGGAGTCCTGCCTCCCAGCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS TCA 72 bp | GGGGACAAAATGAAAGAGAGCTGGTCTATGGCTCCCTaGCTCTTGTCCTTGGCCGTGGCTTCAGCACGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: GDKMKESWSMAP*LLSLAVASARL Trigger: TAGCCGTGCTGAAGCCACGGCCAAGGACAAGAGTCAGGGAGCCATAGACCAGCTCTCTTTCATTTTGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS GCA 72 bp | GGTGGGATATCGTGGTTTGCCACTGACAGGCTGAGCTaGGGTTTGTTTGTTTCTACCTGCAGCTGCAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GGISWFATDRLS*GLFVSTCSCRG Trigger: GCCTCTGCAGCTGCAGGTAGAAACAAACAAACCGCAGCTCAGCCTGTCAGTGGCAAACCACGATATCCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CCA 72 bp | CCCGGCCAGAGCATATGCTGGGTCTTCCCTTTGGCATaGAGTTTCGGACCTTATGGCTCCTTCTCTGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: PGQSICWVFPLA*SFGPYGSFSAL Trigger: CAAAGCAGAGAAGGAGCCATAAGGTCCGAAACTCCATGCCAAAGGGAAGACCCAGCATATGCTCTGGCCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
||
| CDS CCA 72 bp | GTCTTTCAACTCACTCTTCACTACAGCTGGAAGAATTaGGGGCACCCTTCCTCGGTAAGGCACCCGGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: VFQLTLHYSWKN*GHPSSVRHPAR Trigger: TCTGGCCGGGTGCCTTACCGAGGAAGGGTGCCCCCAATTCTTCCAGCTGTAGTGAAGAGTGAGTTGAAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121146.10 |
||
| CDS CAA 72 bp | AAGGCACCCGGCCAGAGCATATGCTGGGTCTTCCCTTaGGCATGGAGTTTCGGACCTTATGGCTCCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: KAPGQSICWVFP*AWSFGPYGSFS Trigger: AGAGAAGGAGCCATAAGGTCCGAAACTCCATGCCAAAGGGAAGACCCAGCATATGCTCTGGCCGGGTGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
||
| CDS CAA 90 bp | TTCCTCGGTAAGGCACCCGGCCAGAGCATATGCTGGGTCTTCCCTTaGGCATGGAGTTTCGGACCTTATGGCTCCTTCTCTGCTTTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: FLGKAPGQSICWVFP*AWSFGPYGSFSALQ Trigger: TTGCAAAGCAGAGAAGGAGCCATAAGGTCCGAAACTCCATGCCAAAGGGAAGACCCAGCATATGCTCTGGCCGGGTGCCTTACCGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
||
| CDS CAA 90 bp | AGTGTGCCTTCATTACTGGGAATCTCTTCACTACAGCTGGAAGAATaGGGGGCACCCTTCCTCGGTAAGGCACCCGGCCAGAGCATATGC | + |
|
Preference number: 6 (lower is better) Translates to: SVPSLLGISSLQLEE*GAPFLGKAPGQSIC Trigger: GCATATGCTCTGGCCGGGTGCCTTACCGAGGAAGGGTGCCCCCAATTCTTCCAGCTGTAGTGAAGAGATTCCCAGTAATGAAGGCACACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141760.4 |
||
| CDS TCA 72 bp | CGTCTGGTGGGATATCGTGGTTTGCCACTGACAGGCTaGGCTGCGGTTTGTTTGTTTCTACCTGCAGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RLVGYRGLPLTG*AAVCLFLPAAA Trigger: TGCAGCTGCAGGTAGAAACAAACAAACCGCAGCTCAGCCTGTCAGTGGCAAACCACGATATCCCACCAGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS TCA 72 bp | ACGCACAGCGTCTGGTGGGATATCGTGGTTTGCCACTaGCAGGCTGAGCTGCGGTTTGTTTGTTTCTACCTG | + |
|
Preference number: 6 (lower is better) Translates to: THSVWWDIVVCH*QAELRFVCFYL Trigger: CAGGTAGAAACAAACAAACCGCAGCTCAGCCTGTCAGTGGCAAACCACGATATCCCACCAGACGCTGTGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS GCA 72 bp | ACCTCATCCTCATTTTCTTCCTTCAGATCCTTGGGCTaGAGGATGGACCACCGTGGGTCCTCTTCACAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TSSSFSSFRSLG*RMDHRGSSSQL Trigger: GAGCTGTGAAGAGGACCCACGGTGGTCCATCCTGCAGCCCAAGGATCTGAAGGAAGAAAATGAGGATGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CCA 72 bp | CCTCACCCACGCCAAAGAGCAAGGGATAGCCTGAGCTaGAAGCTTTGTGTAGCAGCATTTGAGGAACCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PHPRQRARDSLS*KLCVAAFEEPQ Trigger: CTGAGGTTCCTCAAATGCTGCTACACAAAGCTTCCAGCTCAGGCTATCCCTTGCTCTTTGGCGTGGGTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CCA 72 bp | TTTAGGCTCCCTGGAGAGCTTTCCACAGAGCCAGAGTaGTTTTCTGGAGAGTCACCCACTGCAGGGGTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: FRLPGELSTEPE*FSGESPTAGVE Trigger: TTCAACCCCTGCAGTGGGTGACTCTCCAGAAAACCACTCTGGCTCTGTGGAAAGCTCTCCAGGGAGCCTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CAA 72 bp | GTAGGGACCTCATCCTCATTTTCTTCCTTCAGATCCTaGGGCTGCAGGATGGACCACCGTGGGTCCTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VGTSSSFSSFRS*GCRMDHRGSSS Trigger: TGAAGAGGACCCACGGTGGTCCATCCTGCAGCCCAAGGATCTGAAGGAAGAAAATGAGGATGAGGTCCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CAA 90 bp | CCCACAAGGGTGCTGGTATCTAATGGAGGAAGTCTGCACAATTTCTaGGCACGCACAGCGTCTGGTGGGATATCGTGGTTTGCCACTGAC | + |
|
Preference number: 6 (lower is better) Translates to: PTRVLVSNGGSLHNF*ARTASGGISWFATD Trigger: GTCAGTGGCAAACCACGATATCCCACCAGACGCTGTGCGTGCCAAGAAATTGTGCAGACTTCCTCCATTAGATACCAGCACCCTTGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CAA 90 bp | TTTGAAGTAAACAGCTGGGAGGCAGGACTCCCTGCCTTCCCCATTTaGGCCTGTAGAGGGAGCCAGTTCTCATCCCAAACATCGTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: FEVNSWEAGLPAFPI*ACRGSQFSSQTSSP Trigger: AGGTGACGATGTTTGGGATGAGAACTGGCTCCCTCTACAGGCCAAAATGGGGAAGGCAGGGAGTCCTGCCTCCCAGCTGTTTACTTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CCA 72 bp | AATTTCTTGGCACGCACAGCGTCTGGTGGGATATCGTaGTTTGCCACTGACAGGCTGAGCTGCGGTTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: NFLARTASGGIS*FATDRLSCGLF Trigger: AAACAAACCGCAGCTCAGCCTGTCAGTGGCAAACCACGATATCCCACCAGACGCTGTGCGTGCCAAGAAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CCA 72 bp | ACCACCCCCACCAATGGCTTCAAACCACACAGCTTCTaGAAGTGCAAAATAGCTCTGGCTGTCCAGTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TTPTNGFKPHSF*KCKIALAVQCS Trigger: GGAACACTGGACAGCCAGAGCTATTTTGCACTTCCAGAAGCTGTGTGGTTTGAAGCCATTGGTGGGGGTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CCA 72 bp | CAGAGCTGGTGGGTTGAAATCCCTGAAGCCCTTGGATaGGGCATTTTCTCGGCATACAATAGCATGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QSWWVEIPEALG*GIFSAYNSMAF Trigger: GAAGGCCATGCTATTGTATGCCGAGAAAATGCCCCATCCAAGGGCTTCAGGGATTTCAACCCACCAGCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CCA 72 bp | CCTCATTTTCTTCCTTCAGATCCTTGGGCTGCAGGATaGACCACCGTGGGTCCTCTTCACAGCTCTTATGTG | + |
|
Preference number: 6 (lower is better) Translates to: PHFLPSDPWAAG*TTVGPLHSSYV Trigger: CACATAAGAGCTGTGAAGAGGACCCACGGTGGTCCATCCTGCAGCCCAAGGATCTGAAGGAAGAAAATGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CCA 72 bp | GTGTGCCTTCATTACTGGGAATCTCTTCACTACAGCTaGAAGAATTGGGGGCACCCTTCCTCGGTAAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: VCLHYWESLHYS*KNWGHPSSVRH Trigger: GTGCCTTACCGAGGAAGGGTGCCCCCAATTCTTCCAGCTGTAGTGAAGAGATTCCCAGTAATGAAGGCACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141760.4 |
||
| CDS CAA 90 bp | TCTGGTGGGATATCGTGGTTTGCCACTGACAGGCTGAGCTGCGGTTaGTTTGTTTCTACCTGCAGCTGCAGAGGCTTGACCACCAGATTA | + |
|
Preference number: 6 (lower is better) Translates to: SGGISWFATDRLSCG*FVSTCSCRGLTTRL Trigger: TAATCTGGTGGTCAAGCCTCTGCAGCTGCAGGTAGAAACAAACAAACCGCAGCTCAGCCTGTCAGTGGCAAACCACGATATCCCACCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CAA 90 bp | CTGGCGTTAGTGTACAGAGCTGGTGGGTTGAAATCCCTGAAGCCCTaGGATGGGGCATTTTCTCGGCATACAATAGCATGGCCTTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LALVYRAGGLKSLKP*DGAFSRHTIAWPSV Trigger: GACAGAAGGCCATGCTATTGTATGCCGAGAAAATGCCCCATCCAAGGGCTTCAGGGATTTCAACCCACCAGCTCTGTACACTAACGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS GCA 72 bp | AGTCTGAATGCTGGCAGGTTCAGACTGGCTCCTCTCTaGGGACTGCTGAGACTTGATCAGAGAGATGTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SLNAGRFRLAPL*GLLRLDQRDVE Trigger: TTCTACATCTCTCTGATCAAGTCTCAGCAGTCCGCAGAGAGGAGCCAGTCTGAACCTGCCAGCATTCAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CCA 72 bp | AGTAAAAACTTTACTCTTCACTACAGCTGGAAGAATTaGGGGCACCCTTCCTCGGTAAGGCACCCGGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SKNFTLHYSWKN*GHPSSVRHPAR Trigger: TCTGGCCGGGTGCCTTACCGAGGAAGGGTGCCCCCAATTCTTCCAGCTGTAGTGAAGAGTAAAGTTTTTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167528.9 |
||
| CDS CAA 90 bp | ACCAGACGGCAGAGGCTTCAGGTCAGCATCAAACACGAGCAAGTCTaGCCTTTCTTCACTGAACTCAACTCGGAGAATGTCACTAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: TRRQRLQVSIKHEQV*PFFTELNSENVTKS Trigger: GCTCTTAGTGACATTCTCCGAGTTGAGTTCAGTGAAGAAAGGCAAGACTTGCTCGTGTTTGATGCTGACCTGAAGCCTCTGCCGTCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CAA 90 bp | AGGCTGAGCTGCGGTTTGTTTGTTTCTACCTGCAGCTGCAGAGGCTaGACCACCAGATTAGGCTTCTTGTATATCTTCTGTTCTGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RLSCGLFVSTCSCRG*TTRLGFLYIFCSGS Trigger: GGAGCCAGAACAGAAGATATACAAGAAGCCTAATCTGGTGGTCAAGCCTCTGCAGCTGCAGGTAGAAACAAACAAACCGCAGCTCAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS GCA 72 bp | AGGCTGAGCTGCGGTTTGTTTGTTTCTACCTGCAGCTaGAGAGGCTTGACCACCAGATTAGGCTTCTTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: RLSCGLFVSTCS*RGLTTRLGFLY Trigger: ATACAAGAAGCCTAATCTGGTGGTCAAGCCTCTGCAGCTGCAGGTAGAAACAAACAAACCGCAGCTCAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CCA 72 bp | TATTGTTTCTTCCCAACAAGGTTTGAAGTAAACAGCTaGGAGGCAGGACTCCCTGCCTTCCCCATTTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: YCFFPTRFEVNS*EAGLPAFPILA Trigger: GGCCAAAATGGGGAAGGCAGGGAGTCCTGCCTCCCAGCTGTTTACTTCAAACCTTGTTGGGAAGAAACAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CAA 72 bp | GTGGACCGATATCCAAGGATTCGGAGCGGGAGATGGTaGCCAACCATCAAAAGGTACTCCTTTTCCAACTGT | + |
|
Preference number: 6 (lower is better) Translates to: VDRYPRIRSGRW*PTIKRYSFSNC Trigger: ACAGTTGGAAAAGGAGTACCTTTTGATGGTTGGCAACCATCTCCCGCTCCGAATCCTTGGATATCGGTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
||
| CDS CAA 72 bp | GTGCTGGTATCTAATGGAGGAAGTCTGCACAATTTCTaGGCACGCACAGCGTCTGGTGGGATATCGTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: VLVSNGGSLHNF*ARTASGGISWF Trigger: AAACCACGATATCCCACCAGACGCTGTGCGTGCCAAGAAATTGTGCAGACTTCCTCCATTAGATACCAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CAA 90 bp | AGTTCCATAGTGGACCGATATCCAAGGATTCGGAGCGGGAGATGGTaGCCAACCATCAAAAGGTACTCCTTTTCCAACTGTTGTGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SSIVDRYPRIRSGRW*PTIKRYSFSNCCGV Trigger: GACTCCACAACAGTTGGAAAAGGAGTACCTTTTGATGGTTGGCAACCATCTCCCGCTCCGAATCCTTGGATATCGGTCCACTATGGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
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| CDS TCA 72 bp | TCCACCTGTCTGATATTGTTTCTTCCCAACAAGGTTTaGAGTAAACAGCTGGGAGGCAGGACTCCCTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: STCLILFLPNKV*SKQLGGRTPCL Trigger: AAGGCAGGGAGTCCTGCCTCCCAGCTGTTTACTTCAAACCTTGTTGGGAAGAAACAATATCAGACAGGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS GCA 72 bp | TGGACCGATATCCAAGGATTCGGAGCGGGAGATGGTTaGCAACCATCAAAAGGTACTCCTTTTCCAACTGTT | + |
|
Preference number: 6 (lower is better) Translates to: WTDIQGFGAGDG*QPSKGTPFPTV Trigger: AACAGTTGGAAAAGGAGTACCTTTTGATGGTTGGCAACCATCTCCCGCTCCGAATCCTTGGATATCGGTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
||
| CDS CCA 72 bp | ATAGTGGACCGATATCCAAGGATTCGGAGCGGGAGATaGTTGCCAACCATCAAAAGGTACTCCTTTTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: IVDRYPRIRSGR*LPTIKRYSFSN Trigger: GTTGGAAAAGGAGTACCTTTTGATGGTTGGCAACCATCTCCCGCTCCGAATCCTTGGATATCGGTCCACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
||
| CDS CAA 72 bp | CAGAGGCTTCAGGTCAGCATCAAACACGAGCAAGTCTaGCCTTTCTTCACTGAACTCAACTCGGAGAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: QRLQVSIKHEQV*PFFTELNSENV Trigger: GACATTCTCCGAGTTGAGTTCAGTGAAGAAAGGCAAGACTTGCTCGTGTTTGATGCTGACCTGAAGCCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CAA 72 bp | TGCAGCTGCAGAGGCTTGACCACCAGATTAGGCTTCTaGTATATCTTCTGTTCTGGCTCCTTCTGGTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CSCRGLTTRLGF*YIFCSGSFWFF Trigger: GAAGAACCAGAAGGAGCCAGAACAGAAGATATACAAGAAGCCTAATCTGGTGGTCAAGCCTCTGCAGCTGCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CAA 90 bp | TTCCCTTTGGCATGGAGTTTCGGACCTTATGGCTCCTTCTCTGCTTaGCAACCAAACTTGCTATTCCTTTGGTGGATTCGTCTGGAATGG | + |
|
Preference number: 6 (lower is better) Translates to: FPLAWSFGPYGSFSA*QPNLLFLWWIRLEW Trigger: CCATTCCAGACGAATCCACCAAAGGAATAGCAAGTTTGGTTGCAAAGCAGAGAAGGAGCCATAAGGTCCGAAACTCCATGCCAAAGGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
||
| CDS CAA 90 bp | GTTTCTACCTGCAGCTGCAGAGGCTTGACCACCAGATTAGGCTTCTaGTATATCTTCTGTTCTGGCTCCTTCTGGTTCTTCAAAGGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: VSTCSCRGLTTRLGF*YIFCSGSFWFFKGQ Trigger: TTGCCCTTTGAAGAACCAGAAGGAGCCAGAACAGAAGATATACAAGAAGCCTAATCTGGTGGTCAAGCCTCTGCAGCTGCAGGTAGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS TCA 72 bp | CTGTTTTCTTGTCTGGTTGAACTAAACACGAATTTCTaGCTGATGAAAGCGGTCCACCAGACGGCAGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LFSCLVELNTNF*LMKAVHQTAEA Trigger: AGCCTCTGCCGTCTGGTGGACCGCTTTCATCAGTCAGAAATTCGTGTTTAGTTCAACCAGACAAGAAAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS GCA 72 bp | AGAGGCTTCAGGTCAGCATCAAACACGAGCAAGTCTTaGCTTTCTTCACTGAACTCAACTCGGAGAATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RGFRSASNTSKS*LSSLNSTRRMS Trigger: TGACATTCTCCGAGTTGAGTTCAGTGAAGAAAGGCAAGACTTGCTCGTGTTTGATGCTGACCTGAAGCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS GCA 72 bp | GGGAGATTATATACTCCACGAAGACCCCCACAAGGGTaGTGGTATCTAATGGAGGAAGTCTGCACAATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GRLYTPRRPPQG*WYLMEEVCTIS Trigger: AGAAATTGTGCAGACTTCCTCCATTAGATACCAGCACCCTTGTGGGGGTCTTCGTGGAGTATATAATCTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CCA 72 bp | AAATGGCTGAGTAAAAACTTTACTCTTCACTACAGCTaGAAGAATTGGGGGCACCCTTCCTCGGTAAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: KWLSKNFTLHYS*KNWGHPSSVRH Trigger: GTGCCTTACCGAGGAAGGGTGCCCCCAATTCTTCCAGCTGTAGTGAAGAGTAAAGTTTTTACTCAGCCATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167528.9 |
||
| CDS CAA 72 bp | CCAAGGATCCGATGGATAATAACCCGGTACCACCACTaGTCCTCAGAGATCTTTACACAACAGAGATGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PRIRWIITRYHH*SSEIFTQQRCP Trigger: AGGACATCTCTGTTGTGTAAAGATCTCTGAGGACAAGTGGTGGTACCGGGTTATTATCCATCGGATCCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CAA 90 bp | ACCTTATGGCTCCTTCTCTGCTTTGCAACCAAACTTGCTATTCCTTaGGTGGATTCGTCTGGAATGGCTTTCAGTATTACGGTACCATCC | + |
|
Preference number: 6 (lower is better) Translates to: TLWLLLCFATKLAIP*VDSSGMAFSITVPS Trigger: GGATGGTACCGTAATACTGAAAGCCATTCCAGACGAATCCACCAAAGGAATAGCAAGTTTGGTTGCAAAGCAGAGAAGGAGCCATAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
||
| CDS CCA 72 bp | CGAGGACTTCTGCACAGTTCCGATATTTCCGAAATCTaGGTAGAACACTTCCACTTCCTTTTTCCCAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: RGLLHSSDISEI*VEHFHFLFPKD Trigger: ATCCTTGGGAAAAAGGAAGTGGAAGTGTTCTACCCAGATTTCGGAAATATCGGAACTGTGCAGAAGTCCTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CAA 72 bp | TGCGGTTTGTTTGTTTCTACCTGCAGCTGCAGAGGCTaGACCACCAGATTAGGCTTCTTGTATATCTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CGLFVSTCSCRG*TTRLGFLYIFC Trigger: ACAGAAGATATACAAGAAGCCTAATCTGGTGGTCAAGCCTCTGCAGCTGCAGGTAGAAACAAACAAACCGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
||
| CDS CAA 90 bp | CGGGAGATGGTTGCCAACCATCAAAAGGTACTCCTTTTCCAACTGTaGTGGAGTCAAACCATCCTTAGTGGAAATAAGAAGGGACCTTAT | + |
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Preference number: 6 (lower is better) Translates to: REMVANHQKVLLFQL*WSQTILSGNKKGPY Trigger: ATAAGGTCCCTTCTTATTTCCACTAAGGATGGTTTGACTCCACAACAGTTGGAAAAGGAGTACCTTTTGATGGTTGGCAACCATCTCCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
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| CDS CAA 90 bp | TGGAGTTTCGGACCTTATGGCTCCTTCTCTGCTTTGCAACCAAACTaGCTATTCCTTTGGTGGATTCGTCTGGAATGGCTTTCAGTATTA | + |
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Preference number: 6 (lower is better) Translates to: WSFGPYGSFSALQPN*LFLWWIRLEWLSVL Trigger: TAATACTGAAAGCCATTCCAGACGAATCCACCAAAGGAATAGCAAGTTTGGTTGCAAAGCAGAGAAGGAGCCATAAGGTCCGAAACTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
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| CDS CAA 90 bp | CCACCACTTGTCCTCAGAGATCTTTACACAACAGAGATGTCCTGGTaGTATAAAATATTCTGGCATAATGTACCGGTCAGAGACCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: PPLVLRDLYTTEMSW*YKIFWHNVPVRDQL Trigger: CAGCTGGTCTCTGACCGGTACATTATGCCAGAATATTTTATACAACCAGGACATCTCTGTTGTGTAAAGATCTCTGAGGACAAGTGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CAA 90 bp | TCCTTTTTCCCAAGGATCCGATGGATAATAACCCGGTACCACCACTaGTCCTCAGAGATCTTTACACAACAGAGATGTCCTGGTTGTATA | + |
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Preference number: 6 (lower is better) Translates to: SFFPRIRWIITRYHH*SSEIFTQQRCPGCI Trigger: TATACAACCAGGACATCTCTGTTGTGTAAAGATCTCTGAGGACAAGTGGTGGTACCGGGTTATTATCCATCGGATCCTTGGGAAAAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS GCA 72 bp | TGCTCTGGTCTGCTCTACAGAAATGACATCCGAAGCTaGATTCAGCACTTCAAACATAGAGAGGAATCCATA | + |
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Preference number: 6 (lower is better) Translates to: CSGLLYRNDIRS*IQHFKHREESI Trigger: TATGGATTCCTCTCTATGTTTGAAGTGCTGAATGCAGCTTCGGATGTCATTTCTGTAGAGCAGACCAGAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121146.10 |
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| CDS CCA 72 bp | TTAGGCTTCTTGTATATCTTCTGTTCTGGCTCCTTCTaGTTCTTCAAAGGGCAATCCCACGTGGTCTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: LGFLYIFCSGSF*FFKGQSHVVFL Trigger: TAAGAAGACCACGTGGGATTGCCCTTTGAAGAACCAGAAGGAGCCAGAACAGAAGATATACAAGAAGCCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CCA 72 bp | TCAGAGAGATGTAGAACTCTTCCAGTTTGGGCAGTGTaGAAGAATCCAAAGGATACTGTAAATCTGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SERCRTLPVWAV*KNPKDTVNLAA Trigger: AGCAGCCAGATTTACAGTATCCTTTGGATTCTTCCACACTGCCCAAACTGGAAGAGTTCTACATCTCTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CAA 72 bp | AAACCTTGTGGAAACTTAGACACGACAAATTGTATCTaGCGCTTTAGCTCAGGATCAACAGTCCCTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: KPCGNLDTTNCI*RFSSGSTVPPG Trigger: ACCTGGAGGGACTGTTGATCCTGAGCTAAAGCGCAAGATACAATTTGTCGTGTCTAAGTTTCCACAAGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS TCA 72 bp | CAGTCCCTCCAGGTCCAATCTGTGCAATCACGGATTTaGATGTGCTCTCCAACTGATTTAATTTTTCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: QSLQVQSVQSRI*MCSPTDLIFQC Trigger: ACACTGAAAAATTAAATCAGTTGGAGAGCACATTCAAATCCGTGATTGCACAGATTGGACCTGGAGGGACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS GCA 72 bp | ATTCCTCCTTTCACATCATTCGCAAGGCCTAAGGGCTaGCAGGAATCATCCCATATATCTTTAGATGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: IPPFTSFARPKG*QESSHISLDVE Trigger: TTCTACATCTAAAGATATATGGGATGATTCCTGGCAGCCCTTAGGCCTTGCGAATGATGTGAAAGGAGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CCA 72 bp | GCCAACCATCAAAAGGTACTCCTTTTCCAACTGTTGTaGAGTCAAACCATCCTTAGTGGAAATAAGAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: ANHQKVLLFQLL*SQTILSGNKKG Trigger: TCCCTTCTTATTTCCACTAAGGATGGTTTGACTCCACAACAGTTGGAAAAGGAGTACCTTTTGATGGTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
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| CDS CCA 72 bp | TTCTCTGCTTTGCAACCAAACTTGCTATTCCTTTGGTaGATTCGTCTGGAATGGCTTTCAGTATTACGGTAC | + |
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Preference number: 6 (lower is better) Translates to: FSALQPNLLFLW*IRLEWLSVLRY Trigger: GTACCGTAATACTGAAAGCCATTCCAGACGAATCCACCAAAGGAATAGCAAGTTTGGTTGCAAAGCAGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
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| CDS CCA 72 bp | CATACTGCATATACTGAAATGATCGTCCAAAACGCCTaGCAAATGCCTTTTCAAAGTCAGAAAGGAGAACGG | + |
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Preference number: 6 (lower is better) Translates to: HTAYTEMIVQNA*QMPFQSQKGER Trigger: CCGTTCTCCTTTCTGACTTTGAAAAGGCATTTGCCAGGCGTTTTGGACGATCATTTCAGTATATGCAGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121146.10 |
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| CDS CCA 72 bp | TACACAACAGAGATGTCCTGGTTGTATAAAATATTCTaGCATAATGTACCGGTCAGAGACCAGCTGGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: YTTEMSWLYKIF*HNVPVRDQLVG Trigger: TCCAACCAGCTGGTCTCTGACCGGTACATTATGCCAGAATATTTTATACAACCAGGACATCTCTGTTGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CAA 72 bp | GTTGCCAACCATCAAAAGGTACTCCTTTTCCAACTGTaGTGGAGTCAAACCATCCTTAGTGGAAATAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: VANHQKVLLFQL*WSQTILSGNKK Trigger: CTTCTTATTTCCACTAAGGATGGTTTGACTCCACAACAGTTGGAAAAGGAGTACCTTTTGATGGTTGGCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000121146.10 ENSMUST00000141760.4 ENSMUST00000167528.9 |
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| CDS TCA 72 bp | ACTTCAAACATAGAGAGGAATCCATACTGCATATACTaGAATGATCGTCCAAAACGCCTGGCAAATGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: TSNIERNPYCIY*NDRPKRLANAF Trigger: AAAGGCATTTGCCAGGCGTTTTGGACGATCATTTCAGTATATGCAGTATGGATTCCTCTCTATGTTTGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121146.10 |
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| CDS TCA 72 bp | AAACACCAGTCCTTTTGTGCCATTTCTCCACCTGTCTaGTATTGTTTCTTCCCAACAAGGTTTGAAGTAAAC | + |
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Preference number: 6 (lower is better) Translates to: KHQSFCAISPPV*YCFFPTRFEVN Trigger: GTTTACTTCAAACCTTGTTGGGAAGAAACAATATCAGACAGGTGGAGAAATGGCACAAAAGGACTGGTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CAA 72 bp | GTCCTCAGAGATCTTTACACAACAGAGATGTCCTGGTaGTATAAAATATTCTGGCATAATGTACCGGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: VLRDLYTTEMSW*YKIFWHNVPVR Trigger: TCTGACCGGTACATTATGCCAGAATATTTTATACAACCAGGACATCTCTGTTGTGTAAAGATCTCTGAGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CAA 90 bp | GGAATCATCCCATATATCTTTAGATGTAGAAAAACACCAGTCCTTTaGTGCCATTTCTCCACCTGTCTGATATTGTTTCTTCCCAACAAG | + |
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Preference number: 6 (lower is better) Translates to: GIIPYIFRCRKTPVL*CHFSTCLILFLPNK Trigger: CTTGTTGGGAAGAAACAATATCAGACAGGTGGAGAAATGGCACAAAAGGACTGGTGTTTTTCTACATCTAAAGATATATGGGATGATTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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| CDS CAA 72 bp | TTTAAGGTAACTTATACACTTTCCATCATTAATATCTaGCTGGGCTTGCTGCAGTATCTCCTGGTCTTCATT | + |
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Preference number: 6 (lower is better) Translates to: FKVTYTLSIINI*LGLLQYLLVFI Trigger: AATGAAGACCAGGAGATACTGCAGCAAGCCCAGCAAGATATTAATGATGGAAAGTGTATAAGTTACCTTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121146.10 ENSMUST00000167528.9 |
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