Pregenerated sensors for TDRD12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030491Ensembl transcript IDs: ENSMUST00000032701.14, ENSMUST00000127472.3, ENSMUST00000187190.7, ENSMUST00000193633.6, ENSMUST00000205407.2, ENSMUST00000206641.2
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | CCTATGGAATTGGGGTATGGTTCAGTGATGAATGCATaGCCAGGACGCGCAAAGCCCTGTATTTCATCCCCG | + |
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Preference number: 3 (lower is better) Translates to: PMELGYGSVMNA*PGRAKPCISSP Trigger: CGGGGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGCATTCATCACTGAACCATACCCCAATTCCATAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
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| 3UTR GCA 72 bp | TCCTCCTATGGAATTGGGGTATGGTTCAGTGATGAATaGATGCCCAGGACGCGCAAAGCCCTGTATTTCATC | + |
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Preference number: 3 (lower is better) Translates to: SSYGIGVWFSDE*MPRTRKALYFI Trigger: GATGAAATACAGGGCTTTGCGCGTCCTGGGCATGCATTCATCACTGAACCATACCCCAATTCCATAGGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
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| 3UTR-3UTR CAA 90 bp | CGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGACAAAGCAAAAGCAACACTCTGTGTaGGAAAGGGCTGGCATGTCG | + |
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Preference number: 3 (lower is better) Translates to: RKALYFIPVTLRTEQTKQKQHSV*ERAGMS Trigger: CGACATGCCAGCCCTTTCCAACACAGAGTGTTGCTT...TTGCTTTGTCTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
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| 3UTR-3UTR CAA 90 bp | GCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGACAAAGCAAAAAGCAACACTCTGTGTaGGAAAGGGCTGGCATGTCG | + |
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Preference number: 3 (lower is better) Translates to: AKPCISSPSLLEQNRQSKKQHSV*ERAGMS Trigger: CGACATGCCAGCCCTTTCCAACACAGAGTGTTGCTT...TTTGCTTTGTCTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
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| CDS-3UTR GCA 90 bp | AGTGATGAATGCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTAGCACCACCCCAGGCTaGAGTGTGCCCAGCTTCACC | + |
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Preference number: 4 (lower is better) Translates to: SDECMPRTRKALYFIPVTSTTPG*SVPSFT Trigger: GGTGAAGCTGGGCACACTGCAGCCTGGGGTGGTGCT...AGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGCATTCATCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
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| CDS-3UTR GCA 90 bp | GAATGCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGACCCCAGGCTGCAGTGTaGCCAGCTTCACCTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: ECMPRTRKALYFIPVTLRPQAAV*PASPSG Trigger: ACCAGAAGGTGAAGCTGGGCACACTGCAGCCTGGGG...TCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGCATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206641.2 |
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| CDS-3UTR GCA 90 bp | TATGGTTCAGTGATGAATGCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCAGCACCACCCCAGGCTaGAGTGTGCCCAGCTTCACC | + |
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Preference number: 4 (lower is better) Translates to: YGSVMNACPGRAKPCISSSTTPG*SVPSFT Trigger: GGTGAAGCTGGGCACACTGCAGCCTGGGGTGGTGCT...GGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGCATTCATCACTGAACCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
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| CDS-3UTR CCA 90 bp | GCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGCAGCACTTCAGCTCCTaGCAGTACACCACACACACC | + |
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Preference number: 4 (lower is better) Translates to: ACPGRAKPCISSPSLLEQQHFSS*QYTTHT Trigger: GGTGTGTGTGGTGTACTGCCAGGAGCTGAAGTGCTG...CTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
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| CDS-3UTR GCA 90 bp | CCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGCCCAGCTTCACCTTCTaGAACTGGTGCAGGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: PRTRKALYFIPVTLRTEQPSFTF*NWCRSE Trigger: CTCAGACCTGCACCAGTTGCAGAAGGTGAAGCTGGG...CTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
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| CDS-3UTR CCA 90 bp | ATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGCACTTCAGCTCCTaGCAGTACACCACACACACC | + |
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Preference number: 4 (lower is better) Translates to: MPRTRKALYFIPVTLRTEQHFSS*QYTTHT Trigger: GGTGTGTGTGGTGTACTGCCAGGAGCTGAAGTGCTG...TTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
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| CDS-3UTR TCA 90 bp | AATGCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAATGGCCACAGAGTAAGTaGTGGGCTGAGCTTACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NACPGRAKPCISSPSLLEWPQSK*WAELTG Trigger: TCCAGTAAGCTCAGCCCATCACTTACTCTGTGGCCA...TTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
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| CDS-3UTR GCA 90 bp | CCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGGGGAGGCTCTGCTGCTaGTTCTCAAGCATCATTTTA | + |
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Preference number: 4 (lower is better) Translates to: PRTRKALYFIPVTLRTEQGRLCC*FSSIIL Trigger: TAAAATGATGCTTGAGAAGCAGCAGCAGAGCCTCCC...CTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
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| CDS-3UTR GCA 90 bp | AAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGACAAAGCAAAACAGCACCACCCCAGGCTaGAGTGTGCCCAGCTTCACC | + |
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Preference number: 4 (lower is better) Translates to: KALYFIPVTLRTEQTKQNSTTPG*SVPSFT Trigger: GGTGAAGCTGGGCACACTGCAGCCTGGGGTGGTGCT...GTTTTGCTTTGTCTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
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| CDS-3UTR CCA 90 bp | GCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGTGGTTATGCCTCTTTTaGTTGGCCAGTACACAGAAG | + |
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Preference number: 4 (lower is better) Translates to: ACPGRAKPCISSPSLLEQWLCLF*LASTQK Trigger: CTTCTGTGTACTGGCCAACCAAAAGAGGCATAACCA...CTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
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| CDS-3UTR TCA 90 bp | CCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGAGCTCTTAGAAGGTTCTaGAAGTACTGGATGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: PGRAKPCISSPSLLEQNRALRRF*KYWMAA Trigger: TGCAGCCATCCAGTACTTTCAGAACCTTCTAAGAGC...TCTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
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| CDS-3UTR GCA 90 bp | CCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGTGCCAGGTAATGGTCTaGAGAAGAGATGATGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: PRTRKALYFIPVTLRTEQCQVMV*RRDDGL Trigger: AAGTCCATCATCTCTTCTGCAGACCATTACCTGGCA...CTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
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| CDS-3UTR GCA 90 bp | GCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGCAGCATATATGGTTATaGCTCTTTTGGTTGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ACPGRAKPCISSPSLLEQQHIWL*LFWLAS Trigger: ACTGGCCAACCAAAAGAGGCATAACCATATATGCTG...CTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
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| CDS-3UTR CCA 90 bp | GTGATGAATGCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTATGCCTCTTTTGGTTaGCCAGTACACAGAAGATTC | + |
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Preference number: 4 (lower is better) Translates to: VMNACPGRAKPCISSPSLYASFG*PVHRRF Trigger: GAATCTTCTGTGTACTGGCCAACCAAAAGAGGCATA...GAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGCATTCATCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
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| CDS-3UTR CCA 90 bp | GAATGCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGATGGTTATGCCTCTTTTaGTTGGCCAGTACACAGAAG | + |
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Preference number: 4 (lower is better) Translates to: ECMPRTRKALYFIPVTLRWLCLF*LASTQK Trigger: CTTCTGTGTACTGGCCAACCAAAAGAGGCATAACCA...TCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGCATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
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| CDS-3UTR CCA 90 bp | AATGCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAATACCCAGAAGCAACCTaGATCTTCAATCTTCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NACPGRAKPCISSPSLLEYPEAT*IFNLQH Trigger: GTGCTGAAGATTGAAGATCCAGGTTGCTTCTGGGTA...TTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032701.14 |
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| CDS-3UTR TCA 90 bp | CCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGGTTTCTCCAAAGGATTaGGGTTTTTATTCCCCATTG | + |
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Preference number: 4 (lower is better) Translates to: PRTRKALYFIPVTLRTEQVSPKD*GFYSPL Trigger: CAATGGGGAATAAAAACCTCAATCCTTTGGAGAAAC...CTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
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| CDS-3UTR GCA 90 bp | AAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGACAAAGCAAAACCCCAGCTTCACCTTCTaGAACTGGTGCAGGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: KALYFIPVTLRTEQTKQNPSFTF*NWCRSE Trigger: CTCAGACCTGCACCAGTTGCAGAAGGTGAAGCTGGG...GTTTTGCTTTGTCTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
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| CDS-3UTR CCA 90 bp | TATGGTTCAGTGATGAATGCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCTCTGAAAGTACTGGATaGCTGCACTGTCCCATTTTG | + |
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Preference number: 4 (lower is better) Translates to: YGSVMNACPGRAKPCISSSESTG*LHCPIL Trigger: CAAAATGGGACAGTGCAGCCATCCAGTACTTTCAGA...GGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGCATTCATCACTGAACCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
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| CDS-3UTR GCA 90 bp | TATGGTTCAGTGATGAATGCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCCAGCATATATGGTTATaGCTCTTTTGGTTGGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: YGSVMNACPGRAKPCISSQHIWL*LFWLAS Trigger: ACTGGCCAACCAAAAGAGGCATAACCATATATGCTG...GGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGCATTCATCACTGAACCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
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| CDS-3UTR CCA 90 bp | TATGGTTCAGTGATGAATGCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCTATGCCTCTTTTGGTTaGCCAGTACACAGAAGATTC | + |
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Preference number: 4 (lower is better) Translates to: YGSVMNACPGRAKPCISSYASFG*PVHRRF Trigger: GAATCTTCTGTGTACTGGCCAACCAAAAGAGGCATA...GGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGCATTCATCACTGAACCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
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| CDS-3UTR GCA 90 bp | CGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGACAAAGCAATGCCAGGTAATGGTCTaGAGAAGAGATGATGGACTT | + |
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Preference number: 4 (lower is better) Translates to: RKALYFIPVTLRTEQTKQCQVMV*RRDDGL Trigger: AAGTCCATCATCTCTTCTGCAGACCATTACCTGGCA...TTGCTTTGTCTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
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| CDS-3UTR GCA 90 bp | TGGTTCAGTGATGAATGCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCCCCATAAAAGACTCTACTaGAACTCGGATGTTTTTAGA | + |
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Preference number: 4 (lower is better) Translates to: WFSDECMPRTRKALYFIPHKRLY*NSDVFR Trigger: TCTAAAAACATCCGAGTTGCAGTAGAGTCTTTTATG...GGGGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGCATTCATCACTGAACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
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| CDS-3UTR GCA 90 bp | ATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAATCAGGATTTAGAAACTaGAGTAATTTTACACAGCCG | + |
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Preference number: 4 (lower is better) Translates to: MPRTRKALYFIPVTLRTESGFRN*SNFTQP Trigger: CGGCTGTGTAAAATTACTGCAGTTTCTAAATCCTGA...TTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
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| CDS-3UTR CCA 90 bp | CGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGACAAAGCAATCTGAAAGTACTGGATaGCTGCACTGTCCCATTTTG | + |
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Preference number: 4 (lower is better) Translates to: RKALYFIPVTLRTEQTKQSESTG*LHCPIL Trigger: CAAAATGGGACAGTGCAGCCATCCAGTACTTTCAGA...TTGCTTTGTCTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
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| CDS-3UTR TCA 90 bp | GCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGACAAAGCAAAACAAAGCTCTTAGAAGGTTCTaGAAGTACTGGATGGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: ALYFIPVTLRTEQTKQNKALRRF*KYWMAA Trigger: TGCAGCCATCCAGTACTTTCAGAACCTTCTAAGAGC...TTTGTTTTGCTTTGTCTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
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| CDS-3UTR GCA 90 bp | CCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGACATAAAAGACTCTACTaGAACTCGGATGTTTTTAGA | + |
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Preference number: 4 (lower is better) Translates to: PGRAKPCISSPSLLEQNRHKRLY*NSDVFR Trigger: TCTAAAAACATCCGAGTTGCAGTAGAGTCTTTTATG...TCTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
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| CDS-3UTR GCA 90 bp | TATGGTTCAGTGATGAATGCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCTCAGGATTTAGAAACTaGAGTAATTTTACACAGCCG | + |
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Preference number: 4 (lower is better) Translates to: YGSVMNACPGRAKPCISSSGFRN*SNFTQP Trigger: CGGCTGTGTAAAATTACTGCAGTTTCTAAATCCTGA...GGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGCATTCATCACTGAACCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
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| CDS-3UTR CCA 90 bp | CGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGACAAAGCAATATGCCTCTTTTGGTTaGCCAGTACACAGAAGATTC | + |
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Preference number: 4 (lower is better) Translates to: RKALYFIPVTLRTEQTKQYASFG*PVHRRF Trigger: GAATCTTCTGTGTACTGGCCAACCAAAAGAGGCATA...TTGCTTTGTCTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
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| CDS-3UTR CCA 90 bp | GCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGACAAAGCAAATGGTTATGCCTCTTTTaGTTGGCCAGTACACAGAAG | + |
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Preference number: 4 (lower is better) Translates to: AKPCISSPSLLEQNRQSKWLCLF*LASTQK Trigger: CTTCTGTGTACTGGCCAACCAAAAGAGGCATAACCA...TTTGCTTTGTCTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
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| CDS-3UTR TCA 90 bp | CGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGACAAAGCAAGTTTCTCCAAAGGATTaGGGTTTTTATTCCCCATTG | + |
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Preference number: 4 (lower is better) Translates to: RKALYFIPVTLRTEQTKQVSPKD*GFYSPL Trigger: CAATGGGGAATAAAAACCTCAATCCTTTGGAGAAAC...TTGCTTTGTCTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
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| CDS-3UTR GCA 90 bp | GCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGACAAAGCAAACTACGTCCTGACACATaGTGTTATAGAAGTCATTCA | + |
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Preference number: 4 (lower is better) Translates to: AKPCISSPSLLEQNRQSKLRPDT*CYRSHS Trigger: TGAATGACTTCTATAACAGCATGTGTCAGGACGTAG...TTTGCTTTGTCTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032701.14 |
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| CDS-3UTR GCA 90 bp | GCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGACAAAGCAAAACAAATCAGGATTTAGAAACTaGAGTAATTTTACACAGCCG | + |
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Preference number: 4 (lower is better) Translates to: ALYFIPVTLRTEQTKQNKSGFRN*SNFTQP Trigger: CGGCTGTGTAAAATTACTGCAGTTTCTAAATCCTGA...TTTGTTTTGCTTTGTCTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
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| CDS GCA 90 bp | AGGGTTAGGCAGGGCTCGATCCTGTTCCGGAGCACCACCCCAGGCTaGAGTGTGCCCAGCTTCACCTTCTGGTGCAGGTCTGAGGTCCCA | + |
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Preference number: 5 (lower is better) Translates to: RVRQGSILFRSTTPG*SVPSFTFWCRSEVP Trigger: TGGGACCTCAGACCTGCACCAGAAGGTGAAGCTGGGCACACTGCAGCCTGGGGTGGTGCTCCGGAACAGGATCGAGCCCTGCCTAACCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206641.2 |
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| CDS GCA 90 bp | AGGGTTAGGCAGGGCTCGATCCTGTTCCGGAGCACCACCCCAGGCTaGAGTGTGCCCAGCTTCACCTTCTGCAACTGGTGCAGGTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: RVRQGSILFRSTTPG*SVPSFTFCNWCRSE Trigger: CTCAGACCTGCACCAGTTGCAGAAGGTGAAGCTGGGCACACTGCAGCCTGGGGTGGTGCTCCGGAACAGGATCGAGCCCTGCCTAACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 |
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| CDS CCA 90 bp | TACAGGCGTCCACCCAATACTTTTGGTGAGGAAGGAAAGCTGAAGTaGACGACGCACGTGGCATCGGTGATGGCCAGGAGTGGTATGCAG | + |
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Preference number: 5 (lower is better) Translates to: YRRPPNTFGEEGKLK*TTHVASVMARSGMQ Trigger: CTGCATACCACTCCTGGCCATCACCGATGCCACGTGCGTCGTCCACTTCAGCTTTCCTTCCTCACCAAAAGTATTGGGTGGACGCCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187190.7 |
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| CDS-3UTR CAA 90 bp | GCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGGAGCAGGTCACCGAATaGAGACTCTGCCTGGGTTTC | + |
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Preference number: 5 (lower is better) Translates to: ACPGRAKPCISSPSLLEQEQVTE*RLCLGF Trigger: GAAACCCAGGCAGAGTCTCAATTCGGTGACCTGCTC...CTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
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| CDS TCA 90 bp | TCCTCCTGGGAACCAGCTCCTCTTTCTGTACCTCCATCTCCTTGCTaGGTGCCCTGCAAACACACGGTGTCTTCTACTGTTGTAGGTATC | + |
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Preference number: 5 (lower is better) Translates to: SSWEPAPLSVPPSPC*VPCKHTVSSTVVGI Trigger: GATACCTACAACAGTAGAAGACACCGTGTGTTTGCAGGGCACTCAGCAAGGAGATGGAGGTACAGAAAGAGGAGCTGGTTCCCAGGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
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| CDS TCA 90 bp | ATCGTAAGCAGCGGTGGCAAGTACAACAAGGGGTCATTCCCACAGTaGGAAATGACAACCATATCACAGCCACGTGCAATAGGAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IVSSGGKYNKGSFPQ*EMTTISQPRAIGGQ Trigger: CTGGCCTCCTATTGCACGTGGCTGTGATATGGTTGTCATTTCTCACTGTGGGAATGACCCCTTGTTGTACTTGCCACCGCTGCTTACGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS GCA 90 bp | CACTCCTCCCAGTGGTCAAAGTCAAAAGCCACATTAGGATTCCTCTaGTTGAGGAGGCCACACCAGCACTCCTGTTTCTCTTTTGCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HSSQWSKSKATLGFL*LRRPHQHSCFSFAS Trigger: ACTTGCAAAAGAGAAACAGGAGTGCTGGTGTGGCCTCCTCAAGCAGAGGAATCCTAATGTGGCTTTTGACTTTGACCACTGGGAGGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193633.6 |
||
| CDS-3UTR CAA 90 bp | GCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGTTATGCCTCTTTTGGTaGGCCAGTACACAGAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: ACPGRAKPCISSPSLLEQLCLFW*ASTQKI Trigger: AATCTTCTGTGTACTGGCCAACCAAAAGAGGCATAA...CTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
||
| CDS TCA 90 bp | CAACCGCAGTGGCTTCTCATTCGGCCTCTGGCTAGACCCACTTACTaGTGGAACATCTGGATCAGCATATATGGTTATGCCTCTTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QPQWLLIRPLARPTY*WNIWISIYGYASFG Trigger: ACCAAAAGAGGCATAACCATATATGCTGATCCAGATGTTCCATCAGTAAGTGGGTCTAGCCAGAGGCCGAATGAGAAGCCACTGCGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 ENSMUST00000206641.2 |
||
| CDS TCA 90 bp | AAAATGATCAGACATGCAATACAGGCGTCCACCCAATACTTTTGGTaGGGAAGGAAAGCTGAAGTGGACGACGCACGTGGCATCGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: KMIRHAIQASTQYFW*GRKAEVDDARGIGD Trigger: ATCACCGATGCCACGTGCGTCGTCCACTTCAGCTTTCCTTCCTCACCAAAAGTATTGGGTGGACGCCTGTATTGCATGTCTGATCATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187190.7 |
||
| CDS GCA 90 bp | AGTGATGGGCTGAGCTTACTGGAGCAGGTCACCGAATTGAGACTCTaGCTGGGTTTCTCCAAAGGATTGAGGTTTTTATTCCCCATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SDGLSLLEQVTELRL*LGFSKGLRFLFPIG Trigger: ACCAATGGGGAATAAAAACCTCAATCCTTTGGAGAAACCCAGGCAGAGTCTCAATTCGGTGACCTGCTCCAGTAAGCTCAGCCCATCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000127472.3 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 |
||
| CDS GCA 90 bp | ACTTTCATGTCCTCTGTATCTGAGTTCAGACAGGTCAAAGCCATGTaGTTCTTCAGGTCTGCCGACAGAGGTGATTTCTCCAGGGTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: TFMSSVSEFRQVKAM*FFRSADRGDFSRVR Trigger: CCTAACCCTGGAGAAATCACCTCTGTCGGCAGACCTGAAGAAGCACATGGCTTTGACCTGTCTGAACTCAGATACAGAGGACATGAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193633.6 |
||
| CDS-3UTR CAA 90 bp | GTGATGAATGCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCGGTTTCTCCAAAGGATaGAGGTTTTTATTCCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: VMNACPGRAKPCISSPSLGFSKG*RFLFPI Trigger: AATGGGGAATAAAAACCTCAATCCTTTGGAGAAACC...GAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGCATTCATCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGTTATGCCTCTTTTGGTaGGCCAGTACACAGAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: PRTRKALYFIPVTLRTEQLCLFW*ASTQKI Trigger: AATCTTCTGTGTACTGGCCAACCAAAAGAGGCATAA...CTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGAATGGTTATGCCTCTTTaGGTTGGCCAGTACACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PGRAKPCISSPSLLEQNRMVMPL*VGQYTE Trigger: TTCTGTGTACTGGCCAACCAAAAGAGGCATAACCAT...TCTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
||
| CDS TCA 90 bp | ATCTTCTTTGGCTTCCAGGACCCCTGCTGTAAACTCATACAGCTCTaGTGGAATTTTGGCATCTGCTCGCTCCAAGTATCTCAGGATACC | + |
|
Preference number: 5 (lower is better) Translates to: IFFGFQDPCCKLIQL*WNFGICSLQVSQDT Trigger: GGTATCCTGAGATACTTGGAGCGAGCAGATGCCAAAATTCCATCAGAGCTGTATGAGTTTACAGCAGGGGTCCTGGAAGCCAAAGAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS GCA 90 bp | ATACTTGGCAAAATCGACCAGGAAACACTCTGCCAGGTAATGGTCTaGAGAAGAGATGATGGACTTAATCAGAGCCCTGCACCAGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: ILGKIDQETLCQVMV*RRDDGLNQSPAPAL Trigger: AAGTGCTGGTGCAGGGCTCTGATTAAGTCCATCATCTCTTCTGCAGACCATTACCTGGCAGAGTGTTTCCTGGTCGATTTTGCCAAGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000127472.3 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 |
||
| CDS GCA 90 bp | GGCATCTGCTCGCTCCAAGTATCTCAGGATACCAACAGCATGGCTTaGATTCCTCTCCGTCAGCAGCAAGACAGATTTAGTTTTCTTATC | + |
|
Preference number: 5 (lower is better) Translates to: GICSLQVSQDTNSMA*IPLRQQQDRFSFLI Trigger: GATAAGAAAACTAAATCTGTCTTGCTGCTGACGGAGAGGAATGCAAGCCATGCTGTTGGTATCCTGAGATACTTGGAGCGAGCAGATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS GCA 90 bp | TTCCTCTCCGTCAGCAGCAAGACAGATTTAGTTTTCTTATCTCCCTaGTCTGCAGGTGAACCCTTACACACAGTCTCTGTCTCTGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: FLSVSSKTDLVFLSP*SAGEPLHTVSVSAT Trigger: TGTAGCAGAGACAGAGACTGTGTGTAAGGGTTCACCTGCAGAGCAGGGAGATAAGAAAACTAAATCTGTCTTGCTGCTGACGGAGAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193633.6 |
||
| CDS CCA 90 bp | CTAATGGTCTCGCTGCCAATGTCTTCAGATAAAACTCCAGGCTTTTaGTTATCTGAGTCCTCCTGGGAACCAGCTCCTCTTTCTGTACCT | + |
|
Preference number: 5 (lower is better) Translates to: LMVSLPMSSDKTPGF*LSESSWEPAPLSVP Trigger: AGGTACAGAAAGAGGAGCTGGTTCCCAGGAGGACTCAGATAACCAAAAGCCTGGAGTTTTATCTGAAGACATTGGCAGCGAGACCATTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193633.6 |
||
| CDS-3UTR CAA 90 bp | GTGATGAATGCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTTTACTGGAATATACTaGGCAAAATCGACCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: VMNACPGRAKPCISSPSLFTGIY*AKSTRK Trigger: TTTCCTGGTCGATTTTGCCAAGTATATTCCAGTAAA...GAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGCATTCATCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
||
| CDS-3UTR CAA 90 bp | GTGATGAATGCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCGGTTTTTATTCCCCATaGGTGACACATAATAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VMNACPGRAKPCISSPSLGFYSP*VTHNKQ Trigger: TTGCTTATTATGTGTCACCAATGGGGAATAAAAACC...GAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGCATTCATCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGACAAAGCAAAACGAGCAGGTCACCGAATaGAGACTCTGCCTGGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KALYFIPVTLRTEQTKQNEQVTE*RLCLGF Trigger: GAAACCCAGGCAGAGTCTCAATTCGGTGACCTGCTC...GTTTTGCTTTGTCTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
||
| CDS-3UTR CAA 90 bp | TATGGTTCAGTGATGAATGCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCATGGTTATGCCTCTTTaGGTTGGCCAGTACACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: YGSVMNACPGRAKPCISSMVMPL*VGQYTE Trigger: TTCTGTGTACTGGCCAACCAAAAGAGGCATAACCAT...GGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGCATTCATCACTGAACCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
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| CDS TCA 90 bp | GCACATAGTTTTGCTTCCACTTGGGTAGTTGCTCTTAGAAGGTTCTaGAAGTACTGGATGGCTGCACTGTCCCATTTTGTGGCAGGTACA | + |
|
Preference number: 5 (lower is better) Translates to: AHSFASTWVVALRRF*KYWMAALSHFVAGT Trigger: TGTACCTGCCACAAAATGGGACAGTGCAGCCATCCAGTACTTTCAGAACCTTCTAAGAGCAACTACCCAAGTGGAAGCAAAACTATGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000127472.3 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 |
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| CDS TCA 90 bp | TGGTGGGATCATTTCTTCCATAGCAACTTTCATGTCCTCTGTATCTaGGTTCAGACAGGTCAAAGCCATGTGCTTCTTCAGGTCTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: WWDHFFHSNFHVLCI*VQTGQSHVLLQVCR Trigger: TCGGCAGACCTGAAGAAGCACATGGCTTTGACCTGTCTGAACTCAGATACAGAGGACATGAAAGTTGCTATGGAAGAAATGATCCCACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193633.6 |
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| CDS CCA 90 bp | ATTTTGGCATCTGCTCGCTCCAAGTATCTCAGGATACCAACAGCATaGCTTGCATTCCTCTCCGTCAGCAGCAAGACAGATTTAGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ILASARSKYLRIPTA*LAFLSVSSKTDLVF Trigger: GAAAACTAAATCTGTCTTGCTGCTGACGGAGAGGAATGCAAGCCATGCTGTTGGTATCCTGAGATACTTGGAGCGAGCAGATGCCAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
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| CDS CCA 90 bp | ATCTTTTTGGAACCACTTTATTTGTGGGTGAAAGCTTCTTCCATGTaGCTGTGGAGCGCTGCTAATGGTCTCGCTGCCAATGTCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: IFLEPLYLWVKASSM*LWSAANGLAANVFR Trigger: TCTGAAGACATTGGCAGCGAGACCATTAGCAGCGCTCCACAGCCACATGGAAGAAGCTTTCACCCACAAATAAAGTGGTTCCAAAAAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193633.6 |
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| CDS-3UTR CAA 90 bp | AGTGATGAATGCATGCCCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTTTTACTGGAATATACTaGGCAAAATCGACCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SDECMPRTRKALYFIPVTFTGIY*AKSTRK Trigger: TTTCCTGGTCGATTTTGCCAAGTATATTCCAGTAAA...AGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGGGCATGCATTCATCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
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| CDS GCA 90 bp | CTTTTGGTTGGCCAGTACACAGAAGATTCAGTACACTTCTCCGTGTaGTTTAAAGGGAGGCTCTGCTGCTGCTTCTCAAGCATCATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LLVGQYTEDSVHFSV*FKGRLCCCFSSIIL Trigger: TAAAATGATGCTTGAGAAGCAGCAGCAGAGCCTCCCTTTAAAGCACACGGAGAAGTGTACTGAATCTTCTGTGTACTGGCCAACCAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 |
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| CDS GCA 90 bp | CTGCAGGTGAACCCTGTTCAGTTAAACTCTGAAAATGATCAGACATaGAATACAGGCGTCCACCCAATACTTTTGGTGAGGAAGGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LQVNPVQLNSENDQT*NTGVHPILLVRKES Trigger: GCTTTCCTTCCTCACCAAAAGTATTGGGTGGACGCCTGTATTGCATGTCTGATCATTTTCAGAGTTTAACTGAACAGGGTTCACCTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187190.7 |
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| CDS CCA 90 bp | AATGTATCTAGTAACCTTTGGGTTCCATTCAATTTCACTGTCAGCTaGCTTAACCCTACAAACAATGAACTCCACAGCCTGAGGGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: NVSSNLWVPFNFTVS*LNPTNNELHSLRGQ Trigger: CTGCCCCCTCAGGCTGTGGAGTTCATTGTTTGTAGGGTTAAGCCAGCTGACAGTGAAATTGAATGGAACCCAAAGGTTACTAGATACATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
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| CDS-3UTR CAA 90 bp | CCAGGACGCGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGAGGTTTTTATTCCCCATaGGTGACACATAATAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PGRAKPCISSPSLLEQNRGFYSP*VTHNKQ Trigger: TTGCTTATTATGTGTCACCAATGGGGAATAAAAACC...TCTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCGCGTCCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 |
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| CDS-3UTR CAA 90 bp | CGCAAAGCCCTGTATTTCATCCCCGTCACTCTTAGAACAGAACAGACAAAGCAAATGGTTATGCCTCTTTaGGTTGGCCAGTACACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RKALYFIPVTLRTEQTKQMVMPL*VGQYTE Trigger: TTCTGTGTACTGGCCAACCAAAAGAGGCATAACCAT...TTGCTTTGTCTGTTCTGTTCTAAGAGTGACGGGGATGAAATACAGGGCTTTGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000205407.2 ENSMUST00000206641.2 |
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| CDS CCA 90 bp | TTAGAAGGTTCTGAAAGTACTGGATGGCTGCACTGTCCCATTTTGTaGCAGGTACAATCTCAGCATTGTCTTCACAGAAGTCAATGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LEGSESTGWLHCPIL*QVQSQHCLHRSQCA Trigger: TGCACATTGACTTCTGTGAAGACAATGCTGAGATTGTACCTGCCACAAAATGGGACAGTGCAGCCATCCAGTACTTTCAGAACCTTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000127472.3 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 |
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| CDS CCA 90 bp | TTACTGATGGAACATCTGGATCAGCATATATGGTTATGCCTCTTTTaGTTGGCCAGTACACAGAAGATTCAGTACACTTCTCCGTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLMEHLDQHIWLCLF*LASTQKIQYTSPCA Trigger: AGCACACGGAGAAGTGTACTGAATCTTCTGTGTACTGGCCAACCAAAAGAGGCATAACCATATATGCTGATCCAGATGTTCCATCAGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 ENSMUST00000206641.2 |
||
| CDS GCA 90 bp | AGATTTTACTGGAATATACTTGGCAAAATCGACCAGGAAACACTCTaGCAGGTAATGGTCTGCAGAAGAGATGATGGACTTAATCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RFYWNILGKIDQETL*QVMVCRRDDGLNQS Trigger: GCTCTGATTAAGTCCATCATCTCTTCTGCAGACCATTACCTGGCAGAGTGTTTCCTGGTCGATTTTGCCAAGTATATTCCAGTAAAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000127472.3 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 |
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| CDS GCA 90 bp | GCCCTTCTTCCAGCATTAATGGTTTCATTTCTACGTCCTGACACATaGTGTTATAGAAGTCATTCATGGCAGTGTTTAGTTTTTGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: ALLPALMVSFLRPDT*CYRSHSWQCLVFGS Trigger: ACTACCAAAAACTAAACACTGCCATGAATGACTTCTATAACAGCATGTGTCAGGACGTAGAAATGAAACCATTAATGCTGGAAGAAGGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 |
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| CDS GCA 72 bp | ACCACCCCAGGCTGCAGTGTGCCCAGCTTCACCTTCTaGAACTGGTGCAGGTCTGAGGTCCCATCAGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TTPGCSVPSFTF*NWCRSEVPSAL Trigger: GAGAGCTGATGGGACCTCAGACCTGCACCAGTTGCAGAAGGTGAAGCTGGGCACACTGCAGCCTGGGGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 |
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| CDS CCA 72 bp | CCAGGCTGCAGTGTGCCCAGCTTCACCTTCTGCAACTaGTGCAGGTCTGAGGTCCCATCAGCTCTCAAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PGCSVPSFTFCN*CRSEVPSALKG Trigger: TCCTTTGAGAGCTGATGGGACCTCAGACCTGCACCAGTTGCAGAAGGTGAAGCTGGGCACACTGCAGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 |
||
| CDS CCA 72 bp | GGCAGAGTGTGGAATTTCTCAGGGAGCAGCAGCAGCTaGTCTCTTGTGATGAGCTTGGTCCTGCCTTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: GRVWNFSGSSSS*SLVMSLVLPSS Trigger: AGATGAAGGCAGGACCAAGCTCATCACAAGAGACCAGCTGCTGCTGCTCCCTGAGAAATTCCACACTCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS CAA 72 bp | CTGGGAACCAGCTCCTCTTTCTGTACCTCCATCTCCTaGCTGAGTGCCCTGCAAACACACGGTGTCTTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: LGTSSSFCTSIS*LSALQTHGVFY Trigger: GTAGAAGACACCGTGTGTTTGCAGGGCACTCAGCAAGGAGATGGAGGTACAGAAAGAGGAGCTGGTTCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS TCA 72 bp | AGACATGCAATACAGGCGTCCACCCAATACTTTTGGTaGGGAAGGAAAGCTGAAGTGGACGACGCACGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RHAIQASTQYFW*GRKAEVDDARG Trigger: GCCACGTGCGTCGTCCACTTCAGCTTTCCTTCCTCACCAAAAGTATTGGGTGGACGCCTGTATTGCATGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187190.7 |
||
| CDS CAA 72 bp | AGTGATGGGCTGAGCTTACTGGAGCAGGTCACCGAATaGAGACTCTGCCTGGGTTTCTCCAAAGGATTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SDGLSLLEQVTE*RLCLGFSKGLR Trigger: CCTCAATCCTTTGGAGAAACCCAGGCAGAGTCTCAATTCGGTGACCTGCTCCAGTAAGCTCAGCCCATCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000127472.3 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 |
||
| CDS GCA 72 bp | GGCCAGTACACAGAAGATTCAGTACACTTCTCCGTGTaGTTTAAAGGGAGGCTCTGCTGCTGCTTCTCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: GQYTEDSVHFSV*FKGRLCCCFSS Trigger: GCTTGAGAAGCAGCAGCAGAGCCTCCCTTTAAAGCACACGGAGAAGTGTACTGAATCTTCTGTGTACTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 |
||
| CDS GCA 72 bp | CCCACAGTGAGAAATGACAACCATATCACAGCCACGTaGAATAGGAGGCCAGGAGTAAGATGCAGTGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PTVRNDNHITAT*NRRPGVRCSVA Trigger: AGCCACACTGCATCTTACTCCTGGCCTCCTATTGCACGTGGCTGTGATATGGTTGTCATTTCTCACTGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS CCA 72 bp | TTTGTTCCAGTGAACACCCACGGCTACAATCTGGTGTaGTGCAGACTCCCGCTCCTCCACTTCAACGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: FVPVNTHGYNLV*CRLPLLHFNVF Trigger: AAAAACGTTGAAGTGGAGGAGCGGGAGTCTGCACCACACCAGATTGTAGCCGTGGGTGTTCACTGGAACAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS CCA 72 bp | TCTGCTCGCTCCAAGTATCTCAGGATACCAACAGCATaGCTTGCATTCCTCTCCGTCAGCAGCAAGACAGAT | + |
|
Preference number: 6 (lower is better) Translates to: SARSKYLRIPTA*LAFLSVSSKTD Trigger: ATCTGTCTTGCTGCTGACGGAGAGGAATGCAAGCCATGCTGTTGGTATCCTGAGATACTTGGAGCGAGCAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS CAA 72 bp | AGATGCAGTGTGGCTGGGTCCCGGGAACTTGTTTCTTaGAAGAGCCTCTGGTGGGATCATTTCTTCCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: RCSVAGSRELVS*KSLWWDHFFHS Trigger: GCTATGGAAGAAATGATCCCACCAGAGGCTCTTCAAAGAAACAAGTTCCCGGGACCCAGCCACACTGCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193633.6 |
||
| CDS CAA 90 bp | GCTTCCAGGACCCCTGCTGTAAACTCATACAGCTCTGATGGAATTTaGGCATCTGCTCGCTCCAAGTATCTCAGGATACCAACAGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: ASRTPAVNSYSSDGI*ASARSKYLRIPTAW Trigger: CCATGCTGTTGGTATCCTGAGATACTTGGAGCGAGCAGATGCCAAAATTCCATCAGAGCTGTATGAGTTTACAGCAGGGGTCCTGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS TCA 72 bp | GGCTTCCAGGACCCCTGCTGTAAACTCATACAGCTCTaGTGGAATTTTGGCATCTGCTCGCTCCAAGTATCT | + |
|
Preference number: 6 (lower is better) Translates to: GFQDPCCKLIQL*WNFGICSLQVS Trigger: AGATACTTGGAGCGAGCAGATGCCAAAATTCCATCAGAGCTGTATGAGTTTACAGCAGGGGTCCTGGAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS GCA 72 bp | CAGCACTTCAGCTCCTGGCAGTACACCACACACACCTaGCCTTCTTCCAGCATTAATGGTTTCATTTCTACG | + |
|
Preference number: 6 (lower is better) Translates to: QHFSSWQYTTHT*PSSSINGFIST Trigger: CGTAGAAATGAAACCATTAATGCTGGAAGAAGGGCAGGTGTGTGTGGTGTACTGCCAGGAGCTGAAGTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS GCA 72 bp | TCCTCTGTATCTGAGTTCAGACAGGTCAAAGCCATGTaGTTCTTCAGGTCTGCCGACAGAGGTGATTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSVSEFRQVKAM*FFRSADRGDFS Trigger: GGAGAAATCACCTCTGTCGGCAGACCTGAAGAAGCACATGGCTTTGACCTGTCTGAACTCAGATACAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193633.6 |
||
| CDS GCA 72 bp | CAGTGGTCAAAGTCAAAAGCCACATTAGGATTCCTCTaGTTGAGGAGGCCACACCAGCACTCCTGTTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QWSKSKATLGFL*LRRPHQHSCFS Trigger: AGAGAAACAGGAGTGCTGGTGTGGCCTCCTCAAGCAGAGGAATCCTAATGTGGCTTTTGACTTTGACCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193633.6 |
||
| CDS CCA 72 bp | TTTTCAGTCAACCGCAGTGGCTTCTCATTCGGCCTCTaGCTAGACCCACTTACTGATGGAACATCTGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: FSVNRSGFSFGL*LDPLTDGTSGS Trigger: TGATCCAGATGTTCCATCAGTAAGTGGGTCTAGCCAGAGGCCGAATGAGAAGCCACTGCGGTTGACTGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 ENSMUST00000206641.2 |
||
| CDS CCA 72 bp | CAAGCTTCGGTACGTAAGAAGTCTCAAAAGGCTGTGTaGCGTTGTGACAATCACATCACACCCCCTTGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QASVRKKSQKAV*RCDNHITPPWK Trigger: CTTCCAAGGGGGTGTGATGTGATTGTCACAACGCCACACAGCCTTTTGAGACTTCTTACGTACCGAAGCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS CCA 72 bp | GAACCACTTTATTTGTGGGTGAAAGCTTCTTCCATGTaGCTGTGGAGCGCTGCTAATGGTCTCGCTGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: EPLYLWVKASSM*LWSAANGLAAN Trigger: ATTGGCAGCGAGACCATTAGCAGCGCTCCACAGCCACATGGAAGAAGCTTTCACCCACAAATAAAGTGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193633.6 |
||
| CDS CAA 72 bp | GCCACTTTGCAGGACAGGTTTTTAGAATTTACAACCTaGGAGAAAGGGCTGTCCTCCTCACACTCCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ATLQDRFLEFTT*EKGLSSSHSSQ Trigger: CTGGGAGGAGTGTGAGGAGGACAGCCCTTTCTCCAAGGTTGTAAATTCTAAAAACCTGTCCTGCAAAGTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000193633.6 |
||
| CDS CAA 90 bp | CCAGGAGTAAGATGCAGTGTGGCTGGGTCCCGGGAACTTGTTTCTTaGAAGAGCCTCTGGTGGGATCATTTCTTCCATAGCAACTTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: PGVRCSVAGSRELVS*KSLWWDHFFHSNFH Trigger: ATGAAAGTTGCTATGGAAGAAATGATCCCACCAGAGGCTCTTCAAAGAAACAAGTTCCCGGGACCCAGCCACACTGCATCTTACTCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193633.6 |
||
| CDS CAA 90 bp | TCCTCCCAGTGGTCAAAGTCAAAAGCCACATTAGGATTCCTCTGCTaGAGGAGGCCACACCAGCACTCCTGTTTCTCTTTTGCAAGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SSQWSKSKATLGFLC*RRPHQHSCFSFASV Trigger: AACACTTGCAAAAGAGAAACAGGAGTGCTGGTGTGGCCTCCTCAAGCAGAGGAATCCTAATGTGGCTTTTGACTTTGACCACTGGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193633.6 |
||
| CDS TCA 72 bp | TGGCTTCTCATTCGGCCTCTGGCTAGACCCACTTACTaGTGGAACATCTGGATCAGCATATATGGTTATGCC | + |
|
Preference number: 6 (lower is better) Translates to: WLLIRPLARPTY*WNIWISIYGYA Trigger: GGCATAACCATATATGCTGATCCAGATGTTCCATCAGTAAGTGGGTCTAGCCAGAGGCCGAATGAGAAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 ENSMUST00000206641.2 |
||
| CDS TCA 72 bp | AGCGGTGGCAAGTACAACAAGGGGTCATTCCCACAGTaGGAAATGACAACCATATCACAGCCACGTGCAATA | + |
|
Preference number: 6 (lower is better) Translates to: SGGKYNKGSFPQ*EMTTISQPRAI Trigger: TATTGCACGTGGCTGTGATATGGTTGTCATTTCTCACTGTGGGAATGACCCCTTGTTGTACTTGCCACCGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS CCA 72 bp | GGGTCCCGGGAACTTGTTTCTTTGAAGAGCCTCTGGTaGGATCATTTCTTCCATAGCAACTTTCATGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GSRELVSLKSLW*DHFFHSNFHVL Trigger: GAGGACATGAAAGTTGCTATGGAAGAAATGATCCCACCAGAGGCTCTTCAAAGAAACAAGTTCCCGGGACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193633.6 |
||
| CDS CCA 72 bp | GATAAAACTCCAGGCTTTTGGTTATCTGAGTCCTCCTaGGAACCAGCTCCTCTTTCTGTACCTCCATCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: DKTPGFWLSESS*EPAPLSVPPSP Trigger: AGGAGATGGAGGTACAGAAAGAGGAGCTGGTTCCCAGGAGGACTCAGATAACCAAAAGCCTGGAGTTTTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193633.6 |
||
| CDS CAA 90 bp | TGGATGGCTGCACTGTCCCATTTTGTGGCAGGTACAATCTCAGCATaGTCTTCACAGAAGTCAATGTGCAATGTCACAGGCTTTGTACCG | + |
|
Preference number: 6 (lower is better) Translates to: WMAALSHFVAGTISA*SSQKSMCNVTGFVP Trigger: CGGTACAAAGCCTGTGACATTGCACATTGACTTCTGTGAAGACAATGCTGAGATTGTACCTGCCACAAAATGGGACAGTGCAGCCATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000127472.3 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 |
||
| CDS GCA 72 bp | GTCAGCAGCAAGACAGATTTAGTTTTCTTATCTCCCTaGTCTGCAGGTGAACCCTTACACACAGTCTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VSSKTDLVFLSP*SAGEPLHTVSV Trigger: GACAGAGACTGTGTGTAAGGGTTCACCTGCAGAGCAGGGAGATAAGAAAACTAAATCTGTCTTGCTGCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193633.6 |
||
| CDS CAA 72 bp | GCACTGTCCCATTTTGTGGCAGGTACAATCTCAGCATaGTCTTCACAGAAGTCAATGTGCAATGTCACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ALSHFVAGTISA*SSQKSMCNVTG Trigger: GCCTGTGACATTGCACATTGACTTCTGTGAAGACAATGCTGAGATTGTACCTGCCACAAAATGGGACAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000127472.3 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 |
||
| CDS CAA 72 bp | GGTTCTGAAAGTACTGGATGGCTGCACTGTCCCATTTaGTGGCAGGTACAATCTCAGCATTGTCTTCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: GSESTGWLHCPI*WQVQSQHCLHR Trigger: TCTGTGAAGACAATGCTGAGATTGTACCTGCCACAAAATGGGACAGTGCAGCCATCCAGTACTTTCAGAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000127472.3 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 |
||
| CDS CAA 72 bp | ACCCCTGCTGTAAACTCATACAGCTCTGATGGAATTTaGGCATCTGCTCGCTCCAAGTATCTCAGGATACCA | + |
|
Preference number: 6 (lower is better) Translates to: TPAVNSYSSDGI*ASARSKYLRIP Trigger: TGGTATCCTGAGATACTTGGAGCGAGCAGATGCCAAAATTCCATCAGAGCTGTATGAGTTTACAGCAGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS CAA 72 bp | TATGGACAAAGAGGTCTTCTGGCCTTCTTATCTTCTTaGGCTTCCAGGACCCCTGCTGTAAACTCATACAGC | + |
|
Preference number: 6 (lower is better) Translates to: YGQRGLLAFLSS*ASRTPAVNSYS Trigger: GCTGTATGAGTTTACAGCAGGGGTCCTGGAAGCCAAAGAAGATAAGAAGGCCAGAAGACCTCTTTGTCCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS CAA 72 bp | TGGTCAAAGTCAAAAGCCACATTAGGATTCCTCTGCTaGAGGAGGCCACACCAGCACTCCTGTTTCTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: WSKSKATLGFLC*RRPHQHSCFSF Trigger: AAAAGAGAAACAGGAGTGCTGGTGTGGCCTCCTCAAGCAGAGGAATCCTAATGTGGCTTTTGACTTTGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193633.6 |
||
| CDS CAA 90 bp | GCTTTAAGATATGGACAAAGAGGTCTTCTGGCCTTCTTATCTTCTTaGGCTTCCAGGACCCCTGCTGTAAACTCATACAGCTCTGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: ALRYGQRGLLAFLSS*ASRTPAVNSYSSDG Trigger: TCCATCAGAGCTGTATGAGTTTACAGCAGGGGTCCTGGAAGCCAAAGAAGATAAGAAGGCCAGAAGACCTCTTTGTCCATATCTTAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS TCA 72 bp | TTTGCTTCCACTTGGGTAGTTGCTCTTAGAAGGTTCTaGAAGTACTGGATGGCTGCACTGTCCCATTTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FASTWVVALRRF*KYWMAALSHFV Trigger: CACAAAATGGGACAGTGCAGCCATCCAGTACTTTCAGAACCTTCTAAGAGCAACTACCCAAGTGGAAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000127472.3 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 |
||
| CDS CCA 72 bp | TCTGAAAGTACTGGATGGCTGCACTGTCCCATTTTGTaGCAGGTACAATCTCAGCATTGTCTTCACAGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: SESTGWLHCPIL*QVQSQHCLHRS Trigger: ACTTCTGTGAAGACAATGCTGAGATTGTACCTGCCACAAAATGGGACAGTGCAGCCATCCAGTACTTTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000127472.3 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 |
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| CDS CCA 72 bp | GCTGTGTGGCGTTGTGACAATCACATCACACCCCCTTaGAAGCTTCATATTTTTGGCTTCATCTTTGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: AVWRCDNHITPP*KLHIFGFIFVK Trigger: CTTCACAAAGATGAAGCCAAAAATATGAAGCTTCCAAGGGGGTGTGATGTGATTGTCACAACGCCACACAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
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| CDS CCA 72 bp | TCAAAGAACAGCATGTGCACTTCATCCAGAACCAGGTaGCAGAGTCTAAGGAATAACAAGCTTCGGTACGTA | + |
|
Preference number: 6 (lower is better) Translates to: SKNSMCTSSRTR*QSLRNNKLRYV Trigger: TACGTACCGAAGCTTGTTATTCCTTAGACTCTGCCACCTGGTTCTGGATGAAGTGCACATGCTGTTCTTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS CAA 90 bp | CTCTTAGAAGGTTCTGAAAGTACTGGATGGCTGCACTGTCCCATTTaGTGGCAGGTACAATCTCAGCATTGTCTTCACAGAAGTCAATGT | + |
|
Preference number: 6 (lower is better) Translates to: LLEGSESTGWLHCPI*WQVQSQHCLHRSQC Trigger: ACATTGACTTCTGTGAAGACAATGCTGAGATTGTACCTGCCACAAAATGGGACAGTGCAGCCATCCAGTACTTTCAGAACCTTCTAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000127472.3 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 |
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| CDS CAA 90 bp | CTTACTGATGGAACATCTGGATCAGCATATATGGTTATGCCTCTTTaGGTTGGCCAGTACACAGAAGATTCAGTACACTTCTCCGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LTDGTSGSAYMVMPL*VGQYTEDSVHFSVC Trigger: GCACACGGAGAAGTGTACTGAATCTTCTGTGTACTGGCCAACCAAAAGAGGCATAACCATATATGCTGATCCAGATGTTCCATCAGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 ENSMUST00000206641.2 |
||
| CDS GCA 72 bp | TGGAATATACTTGGCAAAATCGACCAGGAAACACTCTaGCAGGTAATGGTCTGCAGAAGAGATGATGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: WNILGKIDQETL*QVMVCRRDDGL Trigger: AAGTCCATCATCTCTTCTGCAGACCATTACCTGGCAGAGTGTTTCCTGGTCGATTTTGCCAAGTATATTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000127472.3 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 |
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| CDS GCA 72 bp | GTCCCATCAGCTCTCAAAGGATCAGGATTTAGAAACTaGAGTAATTTTACACAGCCGTTCTTCTCGTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: VPSALKGSGFRN*SNFTQPFFSSQ Trigger: CTGTGACGAGAAGAACGGCTGTGTAAAATTACTGCAGTTTCTAAATCCTGATCCTTTGAGAGCTGATGGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 ENSMUST00000206641.2 |
||
| CDS GCA 72 bp | ATTGCTTTCTACTACCTTACACACAGTCTCTGTCTCTaGTACAGAACAGGTAAAGATCAAGGTCTTCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: IAFYYLTHSLCL*YRTGKDQGLLG Trigger: GCCCAGAAGACCTTGATCTTTACCTGTTCTGTAGCAGAGACAGAGACTGTGTGTAAGGTAGTAGAAAGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187190.7 |
||
| CDS CAA 72 bp | CATCTGGATCAGCATATATGGTTATGCCTCTTTTGGTaGGCCAGTACACAGAAGATTCAGTACACTTCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: HLDQHIWLCLFW*ASTQKIQYTSP Trigger: CGGAGAAGTGTACTGAATCTTCTGTGTACTGGCCAACCAAAAGAGGCATAACCATATATGCTGATCCAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 ENSMUST00000206641.2 |
||
| CDS CAA 90 bp | CTGATGGAACATCTGGATCAGCATATATGGTTATGCCTCTTTTGGTaGGCCAGTACACAGAAGATTCAGTACACTTCTCCGTGTGCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: LMEHLDQHIWLCLFW*ASTQKIQYTSPCAL Trigger: TAAAGCACACGGAGAAGTGTACTGAATCTTCTGTGTACTGGCCAACCAAAAGAGGCATAACCATATATGCTGATCCAGATGTTCCATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 ENSMUST00000206641.2 |
||
| CDS TCA 72 bp | CATTTCTTCCATAGCAACTTTCATGTCCTCTGTATCTaGGTTCAGACAGGTCAAAGCCATGTGCTTCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: HFFHSNFHVLCI*VQTGQSHVLLQ Trigger: CTGAAGAAGCACATGGCTTTGACCTGTCTGAACTCAGATACAGAGGACATGAAAGTTGCTATGGAAGAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193633.6 |
||
| CDS GCA 72 bp | AACCCTGTTCAGTTAAACTCTGAAAATGATCAGACATaGAATACAGGCGTCCACCCAATACTTTTGGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: NPVQLNSENDQT*NTGVHPILLVR Trigger: CCTCACCAAAAGTATTGGGTGGACGCCTGTATTGCATGTCTGATCATTTTCAGAGTTTAACTGAACAGGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187190.7 |
||
| CDS CCA 72 bp | ATCTGGATCAGCATATATGGTTATGCCTCTTTTGGTTaGCCAGTACACAGAAGATTCAGTACACTTCTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: IWISIYGYASFG*PVHRRFSTLLR Trigger: ACGGAGAAGTGTACTGAATCTTCTGTGTACTGGCCAACCAAAAGAGGCATAACCATATATGCTGATCCAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 ENSMUST00000206641.2 |
||
| CDS CCA 72 bp | GATAATTTCCTTGGGATGTCCATTTCTGGATTAATGTaGTGCCGGTCAGGACAGATCCTTTTGTCTTTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: DNFLGMSISGLM*CRSGQILLSLQ Trigger: TTGCAAAGACAAAAGGATCTGTCCTGACCGGCACCACATTAATCCAGAAATGGACATCCCAAGGAAATTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS CAA 72 bp | GGAACATCTGGATCAGCATATATGGTTATGCCTCTTTaGGTTGGCCAGTACACAGAAGATTCAGTACACTTC | + |
|
Preference number: 6 (lower is better) Translates to: GTSGSAYMVMPL*VGQYTEDSVHF Trigger: GAAGTGTACTGAATCTTCTGTGTACTGGCCAACCAAAAGAGGCATAACCATATATGCTGATCCAGATGTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 ENSMUST00000206641.2 |
||
| CDS GCA 72 bp | TTACTGATGGAACATCTGGATCAGCATATATGGTTATaGCTCTTTTGGTTGGCCAGTACACAGAAGATTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLMEHLDQHIWL*LFWLASTQKIQ Trigger: CTGAATCTTCTGTGTACTGGCCAACCAAAAGAGGCATAACCATATATGCTGATCCAGATGTTCCATCAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 ENSMUST00000206641.2 |
||
| CDS CCA 72 bp | ATGACTACATCCTTTTATAATTACCCAGAAGCAACCTaGATCTTCAATCTTCAGCACCAGGACCTCGAACAT | + |
|
Preference number: 6 (lower is better) Translates to: MTTSFYNYPEAT*IFNLQHQDLEH Trigger: ATGTTCGAGGTCCTGGTGCTGAAGATTGAAGATCCAGGTTGCTTCTGGGTAATTATAAAAGGATGTAGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS CCA 72 bp | GAACATCTGGATCAGCATATATGGTTATGCCTCTTTTaGTTGGCCAGTACACAGAAGATTCAGTACACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: EHLDQHIWLCLF*LASTQKIQYTS Trigger: AGAAGTGTACTGAATCTTCTGTGTACTGGCCAACCAAAAGAGGCATAACCATATATGCTGATCCAGATGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 ENSMUST00000205407.2 ENSMUST00000206641.2 |
||
| CDS CAA 72 bp | TCTGGATTAATGTGGTGCCGGTCAGGACAGATCCTTTaGTCTTTGCAAAAGCCAAAAGCTTTAAGATATGGA | + |
|
Preference number: 6 (lower is better) Translates to: SGLMWCRSGQIL*SLQKPKALRYG Trigger: TCCATATCTTAAAGCTTTTGGCTTTTGCAAAGACAAAAGGATCTGTCCTGACCGGCACCACATTAATCCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS GCA 72 bp | CCAGCATTAATGGTTTCATTTCTACGTCCTGACACATaGTGTTATAGAAGTCATTCATGGCAGTGTTTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: PALMVSFLRPDT*CYRSHSWQCLV Trigger: AACTAAACACTGCCATGAATGACTTCTATAACAGCATGTGTCAGGACGTAGAAATGAAACCATTAATGCTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS CCA 72 bp | CTACGTCCTGACACATGCTGTTATAGAAGTCATTCATaGCAGTGTTTAGTTTTTGGTAGTCAACTTCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LRPDTCCYRSHS*QCLVFGSQLLV Trigger: AACAAGAAGTTGACTACCAAAAACTAAACACTGCCATGAATGACTTCTATAACAGCATGTGTCAGGACGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032701.14 ENSMUST00000187190.7 ENSMUST00000193633.6 |
||
| CDS CCA 72 bp | CAATCACATCACACCCCCTTGGAAGCTTCATATTTTTaGCTTCATCTTTGTGAAGTCCAATTGTTAATAACA | + |
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Preference number: 6 (lower is better) Translates to: QSHHTPLEASYF*LHLCEVQLLIT Trigger: TGTTATTAACAATTGGACTTCACAAAGATGAAGCCAAAAATATGAAGCTTCCAAGGGGGTGTGATGTGATTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000187190.7 ENSMUST00000193633.6 |
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