Pregenerated sensors for TDRD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025081Ensembl transcript IDs: ENSMUST00000078723.11, ENSMUST00000111604.2, ENSMUST00000111606.8, ENSMUST00000121249.8
Found 439 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | AGAAAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTaGCTCATGCTGCTCATGGCTGGGATTACAGGTGTGCACCACCGC | + |
Preference number: 1 (lower is better) Translates to: RKHLTRPLLALSLRS*LMLLMAGITGVHHR Trigger: GCGGTGGTGCACACCTGTAATCCCAGCCATGAGCAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR GCA 90 bp | AGAGATGCTAGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTaGCTCGTACATGAGAGGCTCGAGCTTCTATACTCAGTAGAGCAA | + |
Preference number: 1 (lower is better) Translates to: RDARAGTVAQRKRRA*LVHERLELLYSVEQ Trigger: TTGCTCTACTGAGTATAGAAGCTCGAGCCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCTAGCATCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR TCA 90 bp | AGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATaGGAGGCTCGAGCTTCTATACTCAGTAGAGCAAATACATACACA | + |
Preference number: 1 (lower is better) Translates to: SWDCSSEEEESLPRT*EARASILSRANTYT Trigger: TGTGTATGTATTTGCTCTACTGAGTATAGAAGCTCGAGCCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR CCA 90 bp | TATGAGAGACTACTGGGCTGTCAGGAAGGCACACTCTGCTGCACATaGCTACGGTTAGGACAATCTCTGATCATGAGGTATGACAAATGT | + |
Preference number: 1 (lower is better) Translates to: YERLLGCQEGTLCCT*LRLGQSLIMRYDKC Trigger: ACATTTGTCATACCTCATGATCAGAGATTGTCCTAACCGTAGCCATGTGCAGCAGAGTGTGCCTTCCTGACAGCCCAGTAGTCTCTCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR-3UTR CCA 90 bp | AGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGGCCTCATGCTGCTCATaGCTGGGATTACAGGTGTGC | + |
Preference number: 2 (lower is better) Translates to: SYRPHLSMQHLASSSSALASCCS*LGLQVC Trigger: GCACACCTGTAATCCCAGCCATGAGCAGCATGAGGC...CAGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR-3UTR CCA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGGATTCATGTATTTCGTaGAAAGAATCGGGGAGAGGG | + |
Preference number: 2 (lower is better) Translates to: RAGTVAQRKRRACLVHERDSCIS*KESGRG Trigger: CCCTCTCCCCGATTCTTTCCACGAAATACATGAATC...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR CAA 90 bp | GTTTTGTTTGTGATGAGAAAGCATCTAACTAGGCCCTTGCTGGCTTaGAGCCTGAGGTCTTGCCTCATGCTGCTCATGGCTGGGATTACA | + |
Preference number: 2 (lower is better) Translates to: VLFVMRKHLTRPLLA*SLRSCLMLLMAGIT Trigger: TGTAATCCCAGCCATGAGCAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTTTCTCATCACAAACAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR-3UTR CCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGAGATTCATGTATTTCGTaGAAAGAATCGGGGAGAGGG | + |
Preference number: 2 (lower is better) Translates to: SAHPWSEPQVTQENMPPRDSCIS*KESGRG Trigger: CCCTCTCCCCGATTCTTTCCACGAAATACATGAATC...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR-3UTR CCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCGATTCATGTATTTCGTaGAAAGAATCGGGGAGAGGG | + |
Preference number: 2 (lower is better) Translates to: SKMKSQAIQAQLREAVHIDSCIS*KESGRG Trigger: CCCTCTCCCCGATTCTTTCCACGAAATACATGAATC...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR-3UTR TCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAACCATCCAAGCACAGCTaGGAGAAGCAGTGCACATCC | + |
Preference number: 2 (lower is better) Translates to: LYCLNQDKLNCLRHINIQPSKHS*EKQCTS Trigger: GGATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGG...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR-3UTR GCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAAGAAGGCACACTCTGCTaGACATGGCTACGGTTAGGA | + |
Preference number: 2 (lower is better) Translates to: LYCLNQDKLNCLRHINIQEGTLC*TWLRLG Trigger: TCCTAACCGTAGCCATGTGCAGCAGAGTGTGCCTTC...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR-3UTR CCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAACATGCTGCTCATGGCTaGGATTACAGGTGTGCACCA | + |
Preference number: 2 (lower is better) Translates to: LYCLNQDKLNCLRHINIQHAAHG*DYRCAP Trigger: TGGTGCACACCTGTAATCCCAGCCATGAGCAGCATG...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR-3UTR TCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAAACTGTGGGACAAGTATaGGAGACTACTGGGCTGTCA | + |
Preference number: 2 (lower is better) Translates to: LYCLNQDKLNCLRHINIQTVGQV*ETTGLS Trigger: TGACAGCCCAGTAGTCTCTCATACTTGTCCCACAGT...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR-3UTR CCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAAGATTCATGTATTTCGTaGAAAGAATCGGGGAGAGGG | + |
Preference number: 2 (lower is better) Translates to: LYCLNQDKLNCLRHINIQDSCIS*KESGRG Trigger: CCCTCTCCCCGATTCTTTCCACGAAATACATGAATC...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR-3UTR CCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAAGAGCATAAGTCTGAATaGCTACAGACTAGTGGGAAA | + |
Preference number: 2 (lower is better) Translates to: LYCLNQDKLNCLRHINIQEHKSE*LQTSGK Trigger: TTTCCCACTAGTCTGTAGCCATTCAGACTTATGCTC...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR-3UTR TCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAATCTGATCATGAGGTATaGCAAATGTGCTCTCCATTT | + |
Preference number: 2 (lower is better) Translates to: LYCLNQDKLNCLRHINIQSDHEV*QMCSPF Trigger: AAATGGAGAGCACATTTGTCATACCTCATGATCAGA...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR TCA 72 bp | GGAACCAAAGAGAGCGCATCGGGACGAGGCAGCAGATaGCAGGGAGCGTCCCACTGGCAAAGAAAGGCCTGG | + |
Preference number: 3 (lower is better) Translates to: GTKESASGRGSR*QGASHWQRKAW Trigger: CCAGGCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCGCTCTCTTTGGTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR-3UTR CAA 90 bp | AGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGAGGCCCTTGCTGGCTTaGAGCCTGAGGTCTTGCCTC | + |
Preference number: 3 (lower is better) Translates to: SYRPHLSMQHLASSSSALRPLLA*SLRSCL Trigger: GAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCT...CAGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR-3UTR CAA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCAGGCCCTTGCTGGCTTaGAGCCTGAGGTCTTGCCTC | + |
Preference number: 3 (lower is better) Translates to: ATSYPGKHATQKQGTKESRPLLA*SLRSCL Trigger: GAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCT...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR-3UTR CAA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCCATCTAACTAGGCCCTaGCTGGCTTTGAGCCTGAGG | + |
Preference number: 3 (lower is better) Translates to: ATSYPGKHATQKQGTKESHLTRP*LALSLR Trigger: CCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATG...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR-3UTR CAA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCTCTCAGGTCTGGCGTTaGCTGTCTCTTTCTTCCCAG | + |
Preference number: 3 (lower is better) Translates to: ATSYPGKHATQKQGTKESSQVWR*LSLSSQ Trigger: CTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGA...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR-3UTR CAA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCTCTCAGGTCTGGCGTTaGCTGTCTCTTTCTTCCCAG | + |
Preference number: 3 (lower is better) Translates to: SKMKSQAIQAQLREAVHISQVWR*LSLSSQ Trigger: CTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGA...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR CCA 72 bp | CATCCAAGCACAGCTGAGAGAAGCAGTGCACATCCTTaGAGTGAGCCACAAGTTACCCAGGAAAACATGCCA | + |
Preference number: 3 (lower is better) Translates to: HPSTAERSSAHP*SEPQVTQENMP Trigger: TGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACTGCTTCTCTCAGCTGTGCTTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR TCA 72 bp | TGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATaGGAGGCTCGAGCTTCTATACTCAGTAGAGCAAAT | + |
Preference number: 3 (lower is better) Translates to: CSSEEEESLPRT*EARASILSRAN Trigger: ATTTGCTCTACTGAGTATAGAAGCTCGAGCCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR-3UTR CAA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAATGTCAAGGCTGGAGCTaGTGGACACACTATGATCCA | + |
Preference number: 3 (lower is better) Translates to: LYCLNQDKLNCLRHINIQCQGWS*WTHYDP Trigger: TGGATCATAGTGTGTCCACAAGCTCCAGCCTTGACA...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR GCA 72 bp | AAAACACACACACAATTCTTTCTCAGGTCTGGCGTTTaGTGTCTCTTTCTTCCCAGTGTTTATTTCCAAGAG | + |
Preference number: 3 (lower is better) Translates to: KTHTQFFLRSGV*CLFLPSVYFQE Trigger: CTCTTGGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGTGTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCGCTCCACCAGGGCCCTaGTCCCCAGCATGCCCACCA | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGAPPGP*SPACPP Trigger: TGGTGGGCATGCTGGGGACCAGGGCCCTGGTGGAGC...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCGTGCTACAGGACTTCTaGGAGGGTCCTGGGGCGGGG | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGVLQDF*EGPGAG Trigger: CCCCGCCCCAGGACCCTCTCAGAAGTCCTGTAGCAC...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCCTTCTGAGAGGGTCCTaGGGCGGGGGCTTGCTTTCC | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGLLRGS*GGGLLS Trigger: GGAAAGCAAGCCCCCGCCCCAGGACCCTCTCAGAAG...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCCTGGCTGGGATGGGCTaGACTCTGGAAAGAGGCAGG | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGLAGMG*TLERGR Trigger: CCTGCCTCTTTCCAGAGTGCAGCCCATCCCAGCCAG...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCACGTGGGCCTTCCTCTaGAGCACATCCACGGCTTGT | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGTWAFL*STSTAC Trigger: ACAAGCCGTGGATGTGCTGCAGAGGAAGGCCCACGT...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCCTGTGGTCCACACTCTaGTCCGTGGAGCTCTGCTCA | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGLWSTL*SVELCS Trigger: TGAGCAGAGCTCCACGGAGCAGAGTGTGGACCACAG...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCAACAGGCCACAGCGGTaGCAGGTTGTTGACCGAAGG | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGNRPQR*QVVDRR Trigger: CCTTCGGTCAACAACCTGCCACCGCTGTGGCCTGTT...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGTGCTACAGGACTTCTaGGAGGGTCCTGGGGCGGGG | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTVLQDF*EGPGAG Trigger: CCCCGCCCCAGGACCCTCTCAGAAGTCCTGTAGCAC...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCAGTAGTACGTCTGCTTaGACTGGGAGCACCTCAGCG | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGSSTSA*TGSTSA Trigger: CGCTGAGGTGCTCCCAGTGCAAGCAGACGTACTACT...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGGCAGCTCCAGGTGGCTaGCTGGGATGGGCTGCACTC | + |
Preference number: 4 (lower is better) Translates to: SYRPHLSMQHLASSSSALAAPGG*LGWAAL Trigger: GAGTGCAGCCCATCCCAGCCAGCCACCTGGAGCTGC...CAGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGCAGCTCCAGGTGGCTaGCTGGGATGGGCTGCACTC | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTAAPGG*LGWAAL Trigger: GAGTGCAGCCCATCCCAGCCAGCCACCTGGAGCTGC...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCGGGGTGGTTATGCTGTaGTACAGGACTTCTGAGAGG | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGGVVML*YRTSER Trigger: CCTCTCAGAAGTCCTGTAGCACAGCATAACCACCCC...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGCTTCTGAGAGGGTCCTaGGGCGGGGGCTTGCTTTCC | + |
Preference number: 4 (lower is better) Translates to: SYRPHLSMQHLASSSSALLLRGS*GGGLLS Trigger: GGAAAGCAAGCCCCCGCCCCAGGACCCTCTCAGAAG...CAGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCCTACAGATGGTGCTGTaGGAAGACCAGTCTCTCCTC | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGLQMVL*EDQSLL Trigger: GAGGAGAGACTGGTCTTCCCACAGCACCATCTGTAG...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCTCAATGTACAGGACGTaGGCCTTCCTCTGCAGCACA | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGSMYRT*AFLCST Trigger: TGTGCTGCAGAGGAAGGCCCACGTCCTGTACATTGA...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCTCGAGCTTCTATACTCAGCTCCACCAGGGCCCTaGTCCCCAGCATGCCCACCA | + |
Preference number: 4 (lower is better) Translates to: QRKRRACLVHERLELLYSAPPGP*SPACPP Trigger: TGGTGGGCATGCTGGGGACCAGGGCCCTGGTGGAGC...TGAGTATAGAAGCTCGAGCCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCGAGCATCTAATGATCTaGAAGGGCAGCTCCAGGTGG | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGEHLMI*KGSSRW Trigger: CCACCTGGAGCTGCCCTTCCAGATCATTAGATGCTC...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCGTGCTACAGGACTTCTaGGAGGGTCCTGGGGCGGGG | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESVLQDF*EGPGAG Trigger: CCCCGCCCCAGGACCCTCTCAGAAGTCCTGTAGCAC...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCCCACGTCCTTTTCTTTaGTGGCAAAGCCCGAGTCTA | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGPRPFL*WQSPSL Trigger: TAGACTCGGGCTTTGCCATCAAAGAAAAGGACGTGG...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCAGCACATGGTCCAGCTaGTTTCCTGAGCTCTGTAGA | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGSTWSS*FPELCR Trigger: TCTACAGAGCTCAGGAAAGCAGCTGGACCATGTGCT...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGCTTCTGAGAGGGTCCTaGGGCGGGGGCTTGCTTTCC | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLLLRGS*GGGLLS Trigger: GGAAAGCAAGCCCCCGCCCCAGGACCCTCTCAGAAG...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCATTTCCACCAGCACATaGTCCAGCTGCTTTCCTGAG | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGISTST*SSCFPE Trigger: CTCAGGAAAGCAGCTGGACCATGTGCTGGTGGAAAT...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCGAGCGTGGAATCACATaGCCACAGTATTCACTGAGG | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGERGIT*PQYSLR Trigger: CCTCAGTGAATACTGTGGCCATGTGATTCCACGCTC...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCGCTCCACCAGGGCCCTaGTCCCCAGCATGCCCACCA | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHIAPPGP*SPACPP Trigger: TGGTGGGCATGCTGGGGACCAGGGCCCTGGTGGAGC...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGGGTGGCTGGCTGGGATaGGCTGCACTCTGGAAAGAG | + |
Preference number: 4 (lower is better) Translates to: RAGTVAQRKRRACLVHERGGWLG*AALWKE Trigger: CTCTTTCCAGAGTGCAGCCCATCCCAGCCAGCCACC...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCGCTCTGTTCCAGGTCTaGTCAACTGTGTATTTGGCA | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGALFQV*STVYLA Trigger: TGCCAAATACACAGTTGATCAGACCTGGAACAGAGC...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCGTACCATCTCTTTCATaGCACACACAGCTTCTGGAG | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGVPSLS*HTQLLE Trigger: CTCCAGAAGCTGTGTGTGTCATGAAAGAGATGGTAC...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGCTTCCACTGCTCTGCTaGAGGGCTGGCTTGCACCCT | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLLPLLC*RAGLHP Trigger: AGGGTGCAAGCCAGCCCTTCAGCAGAGCAGTGGAAG...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGACGTGGGCCTTCCTCTaGAGCACATCCACGGCTTGT | + |
Preference number: 4 (lower is better) Translates to: RAGTVAQRKRRACLVHERTWAFL*STSTAC Trigger: ACAAGCCGTGGATGTGCTGCAGAGGAAGGCCCACGT...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCTGTGGTCCACACTCTaGTCCGTGGAGCTCTGCTCA | + |
Preference number: 4 (lower is better) Translates to: RAGTVAQRKRRACLVHERLWSTL*SVELCS Trigger: TGAGCAGAGCTCCACGGAGCAGAGTGTGGACCACAG...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCCTTCTGAGAGGGTCCTaGGGCGGGGGCTTGCTTTCC | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESLLRGS*GGGLLS Trigger: GGAAAGCAAGCCCCCGCCCCAGGACCCTCTCAGAAG...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCTGTATTCCCGTTCTCTaGGCTTTTCAGCCTGAAGGT | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGCIPVL*AFQPEG Trigger: ACCTTCAGGCTGAAAAGCCCAGAGAACGGGAATACA...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTAACAGGCCACAGCGGTaGCAGGTTGTTGACCGAAGG | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTNRPQR*QVVDRR Trigger: CCTTCGGTCAACAACCTGCCACCGCTGTGGCCTGTT...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGGGTGGCTGGCTGGGATaGGCTGCACTCTGGAAAGAG | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLGGWLG*AALWKE Trigger: CTCTTTCCAGAGTGCAGCCCATCCCAGCCAGCCACC...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCGCGGTCCTAACGAGTTaGAGAGTGCTGGATTATTTA | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGAVLTS*RVLDYL Trigger: TAAATAATCCAGCACTCTTCAACTCGTTAGGACCGC...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGGGTCAACGGCACAGGTaGGTACCTCCTCCTCTAAGA | + |
Preference number: 4 (lower is better) Translates to: SYRPHLSMQHLASSSSALGQRHR*VPPPLR Trigger: TCTTAGAGGAGGAGGTACTCACCTGTGCCGTTGACC...CAGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGGGTCAACGGCACAGGTaGGTACCTCCTCCTCTAAGA | + |
Preference number: 4 (lower is better) Translates to: RAGTVAQRKRRACLVHERGQRHR*VPPPLR Trigger: TCTTAGAGGAGGAGGTACTCACCTGTGCCGTTGACC...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGCCGCTCTGCAGCTGCTaGCAAAAGAAGTCCTCTGGT | + |
Preference number: 4 (lower is better) Translates to: SYRPHLSMQHLASSSSALPLCSC*QKKSSG Trigger: ACCAGAGGACTTCTTTTGTCAGCAGCTGCAGAGCGG...CAGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGTCACTGAGGGATTCCTaGAGCTCCGCAAGCTTGTGG | + |
Preference number: 4 (lower is better) Translates to: RAGTVAQRKRRACLVHERSLRDS*SSASLW Trigger: CCACAAGCTTGCGGAGCTTCAGGAATCCCTCAGTGA...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGTCACTGAGGGATTCCTaGAGCTCCGCAAGCTTGTGG | + |
Preference number: 4 (lower is better) Translates to: SYRPHLSMQHLASSSSALSLRDS*SSASLW Trigger: CCACAAGCTTGCGGAGCTTCAGGAATCCCTCAGTGA...CAGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCTCGAGCTTCTATACTCACTTCCACTGCTCTGCTaGAGGGCTGGCTTGCACCCT | + |
Preference number: 4 (lower is better) Translates to: QRKRRACLVHERLELLYSLPLLC*RAGLHP Trigger: AGGGTGCAAGCCAGCCCTTCAGCAGAGCAGTGGAAG...TGAGTATAGAAGCTCGAGCCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGACTTCCACTGCTCTGCTaGAGGGCTGGCTTGCACCCT | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRLPLLC*RAGLHP Trigger: AGGGTGCAAGCCAGCCCTTCAGCAGAGCAGTGGAAG...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCTGCGTGGACATTCTTTaGAATGGCTTTCACAGAGAG | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGCVDIL*NGFHRE Trigger: CTCTCTGTGAAAGCCATTTCAAAGAATGTCCACGCA...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTAGTAGTACGTCTGCTTaGACTGGGAGCACCTCAGCG | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTSSTSA*TGSTSA Trigger: CGCTGAGGTGCTCCCAGTGCAAGCAGACGTACTACT...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCTCGAGCTTCTATACTCACTGGCTGGGATGGGCTaGACTCTGGAAAGAGGCAGG | + |
Preference number: 4 (lower is better) Translates to: QRKRRACLVHERLELLYSLAGMG*TLERGR Trigger: CCTGCCTCTTTCCAGAGTGCAGCCCATCCCAGCCAG...TGAGTATAGAAGCTCGAGCCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCCTGGCTGGGATGGGCTaGACTCTGGAAAGAGGCAGG | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESLAGMG*TLERGR Trigger: CCTGCCTCTTTCCAGAGTGCAGCCCATCCCAGCCAG...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCGTTTCTGTAACTCTGTaGAACAGCAGTCTCTGCTGT | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGVSVTL*NSSLCC Trigger: ACAGCAGAGACTGCTGTTGCACAGAGTTACAGAAAC...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTAAGTCCTCTGGTGTCTaGATGTGGGCAACCACGCCA | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTKSSGV*MWATTP Trigger: TGGCGTGGTTGCCCACATCCAGACACCAGAGGACTT...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGTGGCCAAGGGAACACTaGCTGTGTGCATACTGCTGC | + |
Preference number: 4 (lower is better) Translates to: RAGTVAQRKRRACLVHERWPREH*LCAYCC Trigger: GCAGCAGTATGCACACAGCCAGTGTTCCCTTGGCCA...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCTTTCTGACATTTCACTaGGGATGGCGTAGAACAAGG | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGFLTFH*GWRRTR Trigger: CCTTGTTCTACGCCATCCCCAGTGAAATGTCAGAAA...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCGGTGGCTGGCTGGGATaGGCTGCACTCTGGAAAGAG | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESGGWLG*AALWKE Trigger: CTCTTTCCAGAGTGCAGCCCATCCCAGCCAGCCACC...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTCAAACAGAAGGGCCTTaGCAGCTGCAACACAGCCTT | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTQTEGP*QLQHSL Trigger: AAGGCTGTGTTGCAGCTGTCAAGGCCCTTCTGTTTG...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGCAAACAGAAGGGCCTTaGCAGCTGCAACACAGCCTT | + |
Preference number: 4 (lower is better) Translates to: SYRPHLSMQHLASSSSALQTEGP*QLQHSL Trigger: AAGGCTGTGTTGCAGCTGTCAAGGCCCTTCTGTTTG...CAGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTCCACCACTCTCACTGTaGCCATCCTGTTCTGTACCA | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTPPLSL*PSCSVP Trigger: TGGTACAGAACAGGATGGTCACAGTGAGAGTGGTGG...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCTCGAGCTTCTATACTCACCACGCCGTTCGCGGTaGTTTCCACAACTCTGGCTT | + |
Preference number: 4 (lower is better) Translates to: QRKRRACLVHERLELLYSPRRSR*FPQLWL Trigger: AAGCCAGAGTTGTGGAAATCACCGCGAACGGCGTGG...TGAGTATAGAAGCTCGAGCCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCTCGAGCTTCTATACTCAACGTGGGCCTTCCTCTaGAGCACATCCACGGCTTGT | + |
Preference number: 4 (lower is better) Translates to: QRKRRACLVHERLELLYSTWAFL*STSTAC Trigger: ACAAGCCGTGGATGTGCTGCAGAGGAAGGCCCACGT...TGAGTATAGAAGCTCGAGCCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGACTGTGGTCCACACTCTaGTCCGTGGAGCTCTGCTCA | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRLWSTL*SVELCS Trigger: TGAGCAGAGCTCCACGGAGCAGAGTGTGGACCACAG...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGTCCATTGTCTTCCACTaGTCTGCTGAAGGGCTGGCT | + |
Preference number: 4 (lower is better) Translates to: RAGTVAQRKRRACLVHERSIVFH*SAEGLA Trigger: AGCCAGCCCTTCAGCAGAGCAGTGGAAGACAATGGA...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGTGGGTTTCCTGTTGGTaGCGGCTTCCTGTCTCCTTT | + |
Preference number: 4 (lower is better) Translates to: SYRPHLSMQHLASSSSALWVSCW*RLPVSF Trigger: AAAGGAGACAGGAAGCCGCCACCAACAGGAAACCCA...CAGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTCTACAGATGGTGCTGTaGGAAGACCAGTCTCTCCTC | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTLQMVL*EDQSLL Trigger: GAGGAGAGACTGGTCTTCCCACAGCACCATCTGTAG...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTCTGGCTTGCACCCTGTaGCTGTCGATCTGCTTATGT | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTLACTL*LSICLC Trigger: ACATAAGCAGATCGACAGCCACAGGGTGCAAGCCAG...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGGGATGGGCTGCACTCTaGAAAGAGGCAGGGTTTCGA | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLGWAAL*KEAGFR Trigger: TCGAAACCCTGCCTCTTTCCAGAGTGCAGCCCATCC...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGACTGGGCTTTTCAGCCTaGAGGTGGGGTGGTTATGCT | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRLGFSA*RWGGYA Trigger: AGCATAACCACCCCACCTTCAGGCTGAAAAGCCCAG...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCTCTCCATGGTTTTCTTaGGTTGGAGACTTCTCAAAT | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGSPWFS*VGDFSN Trigger: ATTTGAGAAGTCTCCAACTCAAGAAAACCATGGAGA...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGCAAACAGAAGGGCCTTaGCAGCTGCAACACAGCCTT | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLQTEGP*QLQHSL Trigger: AAGGCTGTGTTGCAGCTGTCAAGGCCCTTCTGTTTG...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCGGTCAACGGCACAGGTaGGTACCTCCTCCTCTAAGA | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESGQRHR*VPPPLR Trigger: TCTTAGAGGAGGAGGTACTCACCTGTGCCGTTGACC...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCCCGCTCTGCAGCTGCTaGCAAAAGAAGTCCTCTGGT | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESPLCSC*QKKSSG Trigger: ACCAGAGGACTTCTTTTGTCAGCAGCTGCAGAGCGG...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCTCACTGAGGGATTCCTaGAGCTCCGCAAGCTTGTGG | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESSLRDS*SSASLW Trigger: CCACAAGCTTGCGGAGCTTCAGGAATCCCTCAGTGA...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGCCACCACTCTCACTGTaGCCATCCTGTTCTGTACCA | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLPPLSL*PSCSVP Trigger: TGGTACAGAACAGGATGGTCACAGTGAGAGTGGTGG...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGCCACGTCCTTTTCTTTaGTGGCAAAGCCCGAGTCTA | + |
Preference number: 4 (lower is better) Translates to: SYRPHLSMQHLASSSSALPRPFL*WQSPSL Trigger: TAGACTCGGGCTTTGCCATCAAAGAAAAGGACGTGG...CAGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGTTGGTAAGATCTCCTTaGCTAGAGCCCGGTACCAGT | + |
Preference number: 4 (lower is better) Translates to: RAGTVAQRKRRACLVHERLVRSP*LEPGTS Trigger: ACTGGTACCGGGCTCTAGTCAAGGAGATCTTACCAA...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTCCCACAACACATGCTTaGAATCTTGCTGTGGCCTCT | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTPTTHA*NLAVAS Trigger: AGAGGCCACAGCAAGATTTCAAGCATGTGTTGTGGG...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCAGTAGTACGTCTGCTTaGACTGGGAGCACCTCAGCG | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESSSTSA*TGSTSA Trigger: CGCTGAGGTGCTCCCAGTGCAAGCAGACGTACTACT...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCTTCAGGCACCACATTTaGATATGTCTCTTTCAAGCT | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGFRHHI*ICLFQA Trigger: AGCTTGAAAGAGACATATGCAAATGTGGTGCCTGAA...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGTCCAACGTCCTCCAATaGACTGTGGTCCACACTCTG | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLSNVLQ*TVVHTL Trigger: CAGAGTGTGGACCACAGTGCATTGGAGGACGTTGGA...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTCTGTGTGCATACTGCTaGCTTTATCTGCCACGTCCT | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTLCAYC*LYLPRP Trigger: AGGACGTGGCAGATAAAGGCAGCAGTATGCACACAG...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCTGTGTGCATACTGCTaGCTTTATCTGCCACGTCCT | + |
Preference number: 4 (lower is better) Translates to: RAGTVAQRKRRACLVHERLCAYC*LYLPRP Trigger: AGGACGTGGCAGATAAAGGCAGCAGTATGCACACAG...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCTCGAGCTTCTATACTCACGGGACTGTACATCATaGAGACCACCACATCCACGG | + |
Preference number: 4 (lower is better) Translates to: QRKRRACLVHERLELLYSRDCTS*RPPHPR Trigger: CCGTGGATGTGGTGGTCTGCATGATGTACAGTCCCG...TGAGTATAGAAGCTCGAGCCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGACGGGACTGTACATCATaGAGACCACCACATCCACGG | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRRDCTS*RPPHPR Trigger: CCGTGGATGTGGTGGTCTGCATGATGTACAGTCCCG...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGGAGCCCCACAACACATaGTTGAAATCTTGCTGTGGC | + |
Preference number: 4 (lower is better) Translates to: RAGTVAQRKRRACLVHEREPHNT*LKSCCG Trigger: GCCACAGCAAGATTTCAAGCATGTGTTGTGGGGCTC...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTAGAAGTGAGGTTTTCTaGCAGGCCACACATCACCAG | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTRSEVF*QATHHQ Trigger: CTGGTGATGTGTGGCCTGGCAGAAAACCTCACTTCT...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCCACTCTTCACTTCAATaGCCTTTGTTTCAAATGGTG | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGHSSLQ*PLFQMV Trigger: CACCATTTGAAACAAAGGCCATTGAAGTGAAGAGTG...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTCCACGGCTTGTACTATaGCTCTGTTCCAGGTCTGAT | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTPRLVL*LCSRSD Trigger: ATCAGACCTGGAACAGAGCCATAGTACAAGCCGTGG...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTATTTCCACCAGCACATaGTCCAGCTGCTTTCCTGAG | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTISTST*SSCFPE Trigger: CTCAGGAAAGCAGCTGGACCATGTGCTGGTGGAAAT...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGAAAGTCCTCTGGTGTCTaGATGTGGGCAACCACGCCA | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRKSSGV*MWATTP Trigger: TGGCGTGGTTGCCCACATCCAGACACCAGAGGACTT...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTCACGTCCCCAATGGTTaGATAAAAGTCAGAGCGTGG | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTHVPNG*IKVRAW Trigger: CCACGCTCTGACTTTTATCCAACCATTGGGGACGTG...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGATGGCCAAGGGAACACTaGCTGTGTGCATACTGCTGC | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRWPREH*LCAYCC Trigger: GCAGCAGTATGCACACAGCCAGTGTTCCCTTGGCCA...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGTCCACAACTCTGGCTTaGAGTTTGAGCCCCACAACA | + |
Preference number: 4 (lower is better) Translates to: SYRPHLSMQHLASSSSALSTTLA*SLSPTT Trigger: TGTTGTGGGGCTCAAACTCCAAGCCAGAGTTGTGGA...CAGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGTCCACAACTCTGGCTTaGAGTTTGAGCCCCACAACA | + |
Preference number: 4 (lower is better) Translates to: RAGTVAQRKRRACLVHERSTTLA*SLSPTT Trigger: TGTTGTGGGGCTCAAACTCCAAGCCAGAGTTGTGGA...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTTCCACAACTCTGGCTTaGAGTTTGAGCCCCACAACA | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTSTTLA*SLSPTT Trigger: TGTTGTGGGGCTCAAACTCCAAGCCAGAGTTGTGGA...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCTCGAGCTTCTATACTCAGGATGGGCTGCACTCTaGAAAGAGGCAGGGTTTCGA | + |
Preference number: 4 (lower is better) Translates to: QRKRRACLVHERLELLYSGWAAL*KEAGFR Trigger: TCGAAACCCTGCCTCTTTCCAGAGTGCAGCCCATCC...TGAGTATAGAAGCTCGAGCCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTGCAGCTCCAGGTGGCTaGCTGGGATGGGCTGCACTC | + |
Preference number: 4 (lower is better) Translates to: THNSFSGLAFAVSFFPVFAAPGG*LGWAAL Trigger: GAGTGCAGCCCATCCCAGCCAGCCACCTGGAGCTGC...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTCACTCTGGTTCAGCATaGCATTTCTCAGCAGCTCCA | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTHSGSA*HFSAAP Trigger: TGGAGCTGCTGAGAAATGCCATGCTGAACCAGAGTG...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCGGACATTCTTTGAAATaGCTTTCACAGAGAGAACCA | + |
Preference number: 4 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGGHSLK*LSQREP Trigger: TGGTTCTCTCTGTGAAAGCCATTTCAAAGAATGTCC...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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3UTR CAA 72 bp | GTGATGAGAAAGCATCTAACTAGGCCCTTGCTGGCTTaGAGCCTGAGGTCTTGCCTCATGCTGCTCATGGCT | + |
Preference number: 4 (lower is better) Translates to: VMRKHLTRPLLA*SLRSCLMLLMA Trigger: AGCCATGAGCAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTTTCTCATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGAGTGCTACAGGACTTCTaGGAGGGTCCTGGGGCGGGG | + |
Preference number: 4 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGVLQDF*EGPGAG Trigger: CCCCGCCCCAGGACCCTCTCAGAAGTCCTGTAGCAC...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGAGACAACAGCAGGGTTTaGAGAGACCACCGAACTGTC | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRDNSRV*RDHRTV Trigger: GACAGTTCGGTGGTCTCTTCAAACCCTGCTGTTGTC...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCTCGAGCTTCTATACTCAGACAACAGCAGGGTTTaGAGAGACCACCGAACTGTC | + |
Preference number: 4 (lower is better) Translates to: QRKRRACLVHERLELLYSDNSRV*RDHRTV Trigger: GACAGTTCGGTGGTCTCTTCAAACCCTGCTGTTGTC...TGAGTATAGAAGCTCGAGCCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCCCGCTCTGCAGCTGCTaGCAAAAGAAGTCCTCTGGT | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHIPLCSC*QKKSSG Trigger: ACCAGAGGACTTCTTTTGTCAGCAGCTGCAGAGCGG...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGTACCATCTCTTTCATaGCACACACAGCTTCTGGAG | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTVPSLS*HTQLLE Trigger: CTCCAGAAGCTGTGTGTGTCATGAAAGAGATGGTAC...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGGTACCATCTCTTTCATaGCACACACAGCTTCTGGAG | + |
Preference number: 4 (lower is better) Translates to: SYRPHLSMQHLASSSSALVPSLS*HTQLLE Trigger: CTCCAGAAGCTGTGTGTGTCATGAAAGAGATGGTAC...CAGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCCCACCACTCTCACTGTaGCCATCCTGTTCTGTACCA | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESPPLSL*PSCSVP Trigger: TGGTACAGAACAGGATGGTCACAGTGAGAGTGGTGG...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGCCACGTCCTTTTCTTTaGTGGCAAAGCCCGAGTCTA | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLPRPFL*WQSPSL Trigger: TAGACTCGGGCTTTGCCATCAAAGAAAAGGACGTGG...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGAAGGTGGGGTGGTTATaGTGTGCTACAGGACTTCTG | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLKVGWL*CATGLL Trigger: CAGAAGTCCTGTAGCACAGCATAACCACCCCACCTT...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCTCGAGCTTCTATACTCAAAGGGCCTTGACAGCTaGAACACAGCCTTCACTCCA | + |
Preference number: 4 (lower is better) Translates to: QRKRRACLVHERLELLYSKGLDS*NTAFTP Trigger: TGGAGTGAAGGCTGTGTTGCAGCTGTCAAGGCCCTT...TGAGTATAGAAGCTCGAGCCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGAAAGGGCCTTGACAGCTaGAACACAGCCTTCACTCCA | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRKGLDS*NTAFTP Trigger: TGGAGTGAAGGCTGTGTTGCAGCTGTCAAGGCCCTT...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCTCGAGCTTCTATACTCATCCATTGTCTTCCACTaGTCTGCTGAAGGGCTGGCT | + |
Preference number: 4 (lower is better) Translates to: QRKRRACLVHERLELLYSSIVFH*SAEGLA Trigger: AGCCAGCCCTTCAGCAGAGCAGTGGAAGACAATGGA...TGAGTATAGAAGCTCGAGCCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTAGCTCCATCACTAACTaGGAACAGCTTCCATTCAGC | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTSSITN*EQLPFS Trigger: GCTGAATGGAAGCTGTTCGCAGTTAGTGATGGAGCT...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGAGCTCCATCACTAACTaGGAACAGCTTCCATTCAGC | + |
Preference number: 4 (lower is better) Translates to: SYRPHLSMQHLASSSSALSSITN*EQLPFS Trigger: GCTGAATGGAAGCTGTTCGCAGTTAGTGATGGAGCT...CAGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGAGCTCCATCACTAACTaGGAACAGCTTCCATTCAGC | + |
Preference number: 4 (lower is better) Translates to: RAGTVAQRKRRACLVHERSSITN*EQLPFS Trigger: GCTGAATGGAAGCTGTTCGCAGTTAGTGATGGAGCT...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGAGAAGTGAGGTTTTCTaGCAGGCCACACATCACCAG | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLRSEVF*QATHHQ Trigger: CTGGTGATGTGTGGCCTGGCAGAAAACCTCACTTCT...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCCTGAAGGTGGGGTaGTTATGCTGTGCTACAGGA | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRSLKVG*LCCATG Trigger: TCCTGTAGCACAGCATAACCACCCCACCTTCAGGCT...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGTGTATTCCCGTTCTCTaGGCTTTTCAGCCTGAAGGT | + |
Preference number: 4 (lower is better) Translates to: SYRPHLSMQHLASSSSALCIPVL*AFQPEG Trigger: ACCTTCAGGCTGAAAAGCCCAGAGAACGGGAATACA...CAGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGACTACAGATGGTGCTGTaGGAAGACCAGTCTCTCCTC | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRLQMVL*EDQSLL Trigger: GAGGAGAGACTGGTCTTCCCACAGCACCATCTGTAG...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCCTACAGATGGTGCTGTaGGAAGACCAGTCTCTCCTC | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESLQMVL*EDQSLL Trigger: GAGGAGAGACTGGTCTTCCCACAGCACCATCTGTAG...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGATCAATGTACAGGACGTaGGCCTTCCTCTGCAGCACA | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRSMYRT*AFLCST Trigger: TGTGCTGCAGAGGAAGGCCCACGTCCTGTACATTGA...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCTCGAGCTTCTATACTCATCAATGTACAGGACGTaGGCCTTCCTCTGCAGCACA | + |
Preference number: 4 (lower is better) Translates to: QRKRRACLVHERLELLYSSMYRT*AFLCST Trigger: TGTGCTGCAGAGGAAGGCCCACGTCCTGTACATTGA...TGAGTATAGAAGCTCGAGCCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCAAGTCCTCTGGTGTCTaGATGTGGGCAACCACGCCA | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHIKSSGV*MWATTP Trigger: TGGCGTGGTTGCCCACATCCAGACACCAGAGGACTT...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGGAGCGTGGAATCACATaGCCACAGTATTCACTGAGG | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLERGIT*PQYSLR Trigger: CCTCAGTGAATACTGTGGCCATGTGATTCCACGCTC...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCTGGCCAAGGGAACACTaGCTGTGTGCATACTGCTGC | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHIWPREH*LCAYCC Trigger: GCAGCAGTATGCACACAGCCAGTGTTCCCTTGGCCA...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGACGTTTCCAGAACAATaGCCCGGTACCAGAAGTCAT | + |
Preference number: 4 (lower is better) Translates to: SYRPHLSMQHLASSSSALTFPEQ*PGTRSH Trigger: ATGACTTCTGGTACCGGGCCATTGTTCTGGAAACGT...CAGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCGCAGCTCCAGGTGGCTaGCTGGGATGGGCTGCACTC | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISAAPGG*LGWAAL Trigger: GAGTGCAGCCCATCCCAGCCAGCCACCTGGAGCTGC...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGAGAGCATCTAATGATCTaGAAGGGCAGCTCCAGGTGG | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPREHLMI*KGSSRW Trigger: CCACCTGGAGCTGCCCTTCCAGATCATTAGATGCTC...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGCACTCTGGTTCAGCATaGCATTTCTCAGCAGCTCCA | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLHSGSA*HFSAAP Trigger: TGGAGCTGCTGAGAAATGCCATGCTGAACCAGAGTG...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGGCAGTCTCTGCTGTGTaGTATCTCTTTAGTGGAAGC | + |
Preference number: 4 (lower is better) Translates to: RAGTVAQRKRRACLVHERAVSAV*YLFSGS Trigger: GCTTCCACTAAAGAGATACCACACAGCAGAGACTGC...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGCAGTCTCTGCTGTGTaGTATCTCTTTAGTGGAAGC | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTAVSAV*YLFSGS Trigger: GCTTCCACTAAAGAGATACCACACAGCAGAGACTGC...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGGCTCTGTTCCAGGTCTaGTCAACTGTGTATTTGGCA | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLALFQV*STVYLA Trigger: TGCCAAATACACAGTTGATCAGACCTGGAACAGAGC...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCCCACGTCCTTTTCTTTaGTGGCAAAGCCCGAGTCTA | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESPRPFL*WQSPSL Trigger: TAGACTCGGGCTTTGCCATCAAAGAAAAGGACGTGG...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCTTGGTAAGATCTCCTTaGCTAGAGCCCGGTACCAGT | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESLVRSP*LEPGTS Trigger: ACTGGTACCGGGCTCTAGTCAAGGAGATCTTACCAA...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCCCCACAACACATGCTTaGAATCTTGCTGTGGCCTCT | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESPTTHA*NLAVAS Trigger: AGAGGCCACAGCAAGATTTCAAGCATGTGTTGTGGG...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGTCGATCTGCTTATGTTaGTTAGCAGGTCTGCTCATC | + |
Preference number: 4 (lower is better) Translates to: RAGTVAQRKRRACLVHERSICLC*LAGLLI Trigger: GATGAGCAGACCTGCTAATCAACATAAGCAGATCGA...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGCTTCTCTTGATTTTCTaGCATTTCACTGGGGATGGC | + |
Preference number: 4 (lower is better) Translates to: SYRPHLSMQHLASSSSALLLLIF*HFTGDG Trigger: GCCATCCCCAGTGAAATGTCAGAAAATCAAGAGAAG...CAGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTTGCGTGGACATTCTTTaGAATGGCTTTCACAGAGAG | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTCVDIL*NGFHRE Trigger: CTCTCTGTGAAAGCCATTTCAAAGAATGTCCACGCA...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCAAGGTGGGGTGGTTATaGTGTGCTACAGGACTTCTG | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESKVGWL*CATGLL Trigger: CAGAAGTCCTGTAGCACAGCATAACCACCCCACCTT...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCTCGAGCTTCTATACTCAAAGGTGGGGTGGTTATaGTGTGCTACAGGACTTCTG | + |
Preference number: 4 (lower is better) Translates to: QRKRRACLVHERLELLYSKVGWL*CATGLL Trigger: CAGAAGTCCTGTAGCACAGCATAACCACCCCACCTT...TGAGTATAGAAGCTCGAGCCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCAAGGGCCTTGACAGCTaGAACACAGCCTTCACTCCA | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHIKGLDS*NTAFTP Trigger: TGGAGTGAAGGCTGTGTTGCAGCTGTCAAGGCCCTT...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCTCCAACGTCCTCCAATaGACTGTGGTCCACACTCTG | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHISNVLQ*TVVHTL Trigger: CAGAGTGTGGACCACAGTGCATTGGAGGACGTTGGA...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGACTGTGTGCATACTGCTaGCTTTATCTGCCACGTCCT | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRLCAYC*LYLPRP Trigger: AGGACGTGGCAGATAAAGGCAGCAGTATGCACACAG...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCTCGAGCTTCTATACTCAGAGCCCCACAACACATaGTTGAAATCTTGCTGTGGC | + |
Preference number: 4 (lower is better) Translates to: QRKRRACLVHERLELLYSEPHNT*LKSCCG Trigger: GCCACAGCAAGATTTCAAGCATGTGTTGTGGGGCTC...TGAGTATAGAAGCTCGAGCCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGAGAGCCCCACAACACATaGTTGAAATCTTGCTGTGGC | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPREPHNT*LKSCCG Trigger: GCCACAGCAAGATTTCAAGCATGTGTTGTGGGGCTC...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCTCCATTGTCTTCCACTaGTCTGCTGAAGGGCTGGCT | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHISIVFH*SAEGLA Trigger: AGCCAGCCCTTCAGCAGAGCAGTGGAAGACAATGGA...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGACCACGGCTTGTACTATaGCTCTGTTCCAGGTCTGAT | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRPRLVL*LCSRSD Trigger: ATCAGACCTGGAACAGAGCCATAGTACAAGCCGTGG...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCATTTCCACCAGCACATaGTCCAGCTGCTTTCCTGAG | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESISTST*SSCFPE Trigger: CTCAGGAAAGCAGCTGGACCATGTGCTGGTGGAAAT...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGTCAAAGTCAGCACTTTaGGGATCAGGGCATTTCTGT | + |
Preference number: 4 (lower is better) Translates to: RAGTVAQRKRRACLVHERSKSAL*GSGHFC Trigger: ACAGAAATGCCCTGATCCCCAAAGTGCTGACTTTGA...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTTCAAAGTCAGCACTTTaGGGATCAGGGCATTTCTGT | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTSKSAL*GSGHFC Trigger: ACAGAAATGCCCTGATCCCCAAAGTGCTGACTTTGA...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGACACGTCCCCAATGGTTaGATAAAAGTCAGAGCGTGG | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRHVPNG*IKVRAW Trigger: CCACGCTCTGACTTTTATCCAACCATTGGGGACGTG...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGATCCACAACTCTGGCTTaGAGTTTGAGCCCCACAACA | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRSTTLA*SLSPTT Trigger: TGTTGTGGGGCTCAAACTCCAAGCCAGAGTTGTGGA...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCGAGCATCTAATGATCTaGAAGGGCAGCTCCAGGTGG | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHIEHLMI*KGSSRW Trigger: CCACCTGGAGCTGCCCTTCCAGATCATTAGATGCTC...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCCACTCTGGTTCAGCATaGCATTTCTCAGCAGCTCCA | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESHSGSA*HFSAAP Trigger: TGGAGCTGCTGAGAAATGCCATGCTGAACCAGAGTG...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGGCGGTCCTAACGAGTTaGAGAGTGCTGGATTATTTA | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLAVLTS*RVLDYL Trigger: TAAATAATCCAGCACTCTTCAACTCGTTAGGACCGC...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGAGCTCTGTTCCAGGTCTaGTCAACTGTGTATTTGGCA | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRALFQV*STVYLA Trigger: TGCCAAATACACAGTTGATCAGACCTGGAACAGAGC...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCTTGGTAAGATCTCCTTaGCTAGAGCCCGGTACCAGT | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHILVRSP*LEPGTS Trigger: ACTGGTACCGGGCTCTAGTCAAGGAGATCTTACCAA...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCCCCACAACACATGCTTaGAATCTTGCTGTGGCCTCT | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHIPTTHA*NLAVAS Trigger: AGAGGCCACAGCAAGATTTCAAGCATGTGTTGTGGG...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTCCACGCCGTTCGCGGTaGTTTCCACAACTCTGGCTT | + |
Preference number: 4 (lower is better) Translates to: THNSFSGLAFAVSFFPVFPRRSR*FPQLWL Trigger: AAGCCAGAGTTGTGGAAATCACCGCGAACGGCGTGG...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCCTTCCACTGCTCTGCTaGAGGGCTGGCTTGCACCCT | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISLPLLC*RAGLHP Trigger: AGGGTGCAAGCCAGCCCTTCAGCAGAGCAGTGGAAG...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGTGCGTGGACATTCTTTaGAATGGCTTTCACAGAGAG | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLCVDIL*NGFHRE Trigger: CTCTCTGTGAAAGCCATTTCAAAGAATGTCCACGCA...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGAGCTTGTTCAAACTTTaGTGTACAGGCCTACAGATG | + |
Preference number: 4 (lower is better) Translates to: RAGTVAQRKRRACLVHERSLFKL*CTGLQM Trigger: CATCTGTAGGCCTGTACAGCAAAGTTTGAACAAGCT...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTCTGTGGTCCACACTCTaGTCCGTGGAGCTCTGCTCA | + |
Preference number: 4 (lower is better) Translates to: THNSFSGLAFAVSFFPVFLWSTL*SVELCS Trigger: TGAGCAGAGCTCCACGGAGCAGAGTGTGGACCACAG...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGACTGCTGCCTTTATCTaGCACGTCCTTTTCTTTGAT | + |
Preference number: 4 (lower is better) Translates to: SYRPHLSMQHLASSSSALTAAFI*HVLFFD Trigger: ATCAAAGAAAAGGACGTGGCAGATAAAGGCAGCAGT...CAGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCGGAACACTGGCTGTGTaGATACTGCTGCCTTTATCT | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESGTLAV*ILLPLS Trigger: AGATAAAGGCAGCAGTATGCACACAGCCAGTGTTCC...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCTCGAGCTTCTATACTCAGGAACACTGGCTGTGTaGATACTGCTGCCTTTATCT | + |
Preference number: 4 (lower is better) Translates to: QRKRRACLVHERLELLYSGTLAV*ILLPLS Trigger: AGATAAAGGCAGCAGTATGCACACAGCCAGTGTTCC...TGAGTATAGAAGCTCGAGCCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGAGGAACACTGGCTGTGTaGATACTGCTGCCTTTATCT | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRGTLAV*ILLPLS Trigger: AGATAAAGGCAGCAGTATGCACACAGCCAGTGTTCC...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGCACCTTAAGACCAACTaGTCTCTGATGAGCACATCA | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLHLKTN*SLMSTS Trigger: TGATGTGCTCATCAGAGAGCAGTTGGTCTTAAGGTG...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGATCAACTGTGTATTTaGCAACACAAACTTCCCCCT | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTDQLCI*QHKLPP Trigger: AGGGGGAAGTTTGTGTTGCCAAATACACAGTTGATC...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGACACACAGCACTTTATaGCAGAAGGAGGAAACAAGT | + |
Preference number: 4 (lower is better) Translates to: SYRPHLSMQHLASSSSALTHSTL*QKEETS Trigger: ACTTGTTTCCTCCTTCTGCCATAAAGTGCTGTGTGT...CAGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGTCAAAGTCAGCACTTTaGGGATCAGGGCATTTCTGT | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLSKSAL*GSGHFC Trigger: ACAGAAATGCCCTGATCCCCAAAGTGCTGACTTTGA...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCCACGTCCCCAATGGTTaGATAAAAGTCAGAGCGTGG | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHIHVPNG*IKVRAW Trigger: CCACGCTCTGACTTTTATCCAACCATTGGGGACGTG...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCTTGAAATCTTGCTGTaGCCTCTTTTGTCCAATGCT | + |
Preference number: 4 (lower is better) Translates to: RAGTVAQRKRRACLVHERLEILL*PLLSNA Trigger: AGCATTGGACAAAAGAGGCCACAGCAAGATTTCAAG...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCTCGAGCTTCTATACTCAGAGAGAACCACACTCTaGTTCAGCATGGCATTTCTC | + |
Preference number: 4 (lower is better) Translates to: QRKRRACLVHERLELLYSERTTL*FSMAFL Trigger: GAGAAATGCCATGCTGAACCAGAGTGTGGTTCTCTC...TGAGTATAGAAGCTCGAGCCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTCCGCTCTGCAGCTGCTaGCAAAAGAAGTCCTCTGGT | + |
Preference number: 4 (lower is better) Translates to: THNSFSGLAFAVSFFPVFPLCSC*QKKSSG Trigger: ACCAGAGGACTTCTTTTGTCAGCAGCTGCAGAGCGG...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCGTACCATCTCTTTCATaGCACACACAGCTTCTGGAG | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHIVPSLS*HTQLLE Trigger: CTCCAGAAGCTGTGTGTGTCATGAAAGAGATGGTAC...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCCCACGCCGTTCGCGGTaGTTTCCACAACTCTGGCTT | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISPRRSR*FPQLWL Trigger: AAGCCAGAGTTGTGGAAATCACCGCGAACGGCGTGG...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCTCGATCTGCTTATGTTaGTTAGCAGGTCTGCTCATC | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESSICLC*LAGLLI Trigger: GATGAGCAGACCTGCTAATCAACATAAGCAGATCGA...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
||
CDS-3UTR TCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGACTTCTCTTGATTTTCTaGCATTTCACTGGGGATGGC | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRLLLIF*HFTGDG Trigger: GCCATCCCCAGTGAAATGTCAGAAAATCAAGAGAAG...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGACACACAGCTTCTCTTaGTTTTCTGACATTTCACTG | + |
Preference number: 4 (lower is better) Translates to: RAGTVAQRKRRACLVHERTHSFS*FSDISL Trigger: CAGTGAAATGTCAGAAAATCAAGAGAAGCTGTGTGT...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGATGCGTGGACATTCTTTaGAATGGCTTTCACAGAGAG | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRCVDIL*NGFHRE Trigger: CTCTCTGTGAAAGCCATTTCAAAGAATGTCCACGCA...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGAGCTTGTTCAAACTTTaGTGTACAGGCCTACAGATG | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLSLFKL*CTGLQM Trigger: CATCTGTAGGCCTGTACAGCAAAGTTTGAACAAGCT...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTTTCAGGCACCACATTTaGATATGTCTCTTTCAAGCT | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTFRHHI*ICLFQA Trigger: AGCTTGAAAGAGACATATGCAAATGTGGTGCCTGAA...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCACGTGGGCCTTCCTCTaGAGCACATCCACGGCTTGT | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISTWAFL*STSTAC Trigger: ACAAGCCGTGGATGTGCTGCAGAGGAAGGCCCACGT...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGACTGCTGCCTTTATCTaGCACGTCCTTTTCTTTGAT | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLTAAFI*HVLFFD Trigger: ATCAAAGAAAAGGACGTGGCAGATAAAGGCAGCAGT...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCCACCTTAAGACCAACTaGTCTCTGATGAGCACATCA | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESHLKTN*SLMSTS Trigger: TGATGTGCTCATCAGAGAGCAGTTGGTCTTAAGGTG...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCAGCTCCATCACTAACTaGGAACAGCTTCCATTCAGC | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHISSITN*EQLPFS Trigger: GCTGAATGGAAGCTGTTCGCAGTTAGTGATGGAGCT...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCGTTTCTGTAACTCTGTaGAACAGCAGTCTCTGCTGT | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESVSVTL*NSSLCC Trigger: ACAGCAGAGACTGCTGTTGCACAGAGTTACAGAAAC...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCTGTATTCCCGTTCTCTaGGCTTTTCAGCCTGAAGGT | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHICIPVL*AFQPEG Trigger: ACCTTCAGGCTGAAAAGCCCAGAGAACGGGAATACA...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGAAACAGGCCACAGCGGTaGCAGGTTGTTGACCGAAGG | + |
Preference number: 4 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGNRPQR*QVVDRR Trigger: CCTTCGGTCAACAACCTGCCACCGCTGTGGCCTGTT...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGACACACAGCACTTTATaGCAGAAGGAGGAAACAAGT | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLTHSTL*QKEETS Trigger: ACTTGTTTCCTCCTTCTGCCATAAAGTGCTGTGTGT...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCACAAAAGAAGTCCTCTaGTGTCTGGATGTGGGCAAC | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHITKEVL*CLDVGN Trigger: GTTGCCCACATCCAGACACCAGAGGACTTCTTTTGT...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCTTTCTGACATTTCACTaGGGATGGCGTAGAACAAGG | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESFLTFH*GWRRTR Trigger: CCTTGTTCTACGCCATCCCCAGTGAAATGTCAGAAA...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGATTTCTGACATTTCACTaGGGATGGCGTAGAACAAGG | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRFLTFH*GWRRTR Trigger: CCTTGTTCTACGCCATCCCCAGTGAAATGTCAGAAA...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCACGTTTCCAGAACAATaGCCCGGTACCAGAAGTCAT | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHITFPEQ*PGTRSH Trigger: ATGACTTCTGGTACCGGGCCATTGTTCTGGAAACGT...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTGGATGGGCTGCACTCTaGAAAGAGGCAGGGTTTCGA | + |
Preference number: 4 (lower is better) Translates to: THNSFSGLAFAVSFFPVFGWAAL*KEAGFR Trigger: TCGAAACCCTGCCTCTTTCCAGAGTGCAGCCCATCC...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCGAGAGAACCACACTCTaGTTCAGCATGGCATTTCTC | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHIERTTL*FSMAFL Trigger: GAGAAATGCCATGCTGAACCAGAGTGTGGTTCTCTC...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGGACATTCTTTGAAATaGCTTTCACAGAGAGAACCA | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTGHSLK*LSQREP Trigger: TGGTTCTCTCTGTGAAAGCCATTTCAAAGAATGTCC...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGTCAACTGACACTGCGTaGACATTCTTTGAAATGGCT | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLSTDTA*TFFEMA Trigger: AGCCATTTCAAAGAATGTCCACGCAGTGTCAGTTGA...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCTCACTGAGGGATTCCTaGAGCTCCGCAAGCTTGTGG | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISSLRDS*SSASLW Trigger: CCACAAGCTTGCGGAGCTTCAGGAATCCCTCAGTGA...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTAAAGTCTTTTCAGACTaGGAATCTCAAAGTTCCCAT | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTKVFSD*ESQSSH Trigger: ATGGGAACTTTGAGATTCTCAGTCTGAAAAGACTTT...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCTCGATCTGCTTATGTTaGTTAGCAGGTCTGCTCATC | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHISICLC*LAGLLI Trigger: GATGAGCAGACCTGCTAATCAACATAAGCAGATCGA...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTGGGGTGGTTATGCTGTaGTACAGGACTTCTGAGAGG | + |
Preference number: 4 (lower is better) Translates to: THNSFSGLAFAVSFFPVFGVVML*YRTSER Trigger: CCTCTCAGAAGTCCTGTAGCACAGCATAACCACCCC...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCAGTAGTACGTCTGCTTaGACTGGGAGCACCTCAGCG | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISSSTSA*TGSTSA Trigger: CGCTGAGGTGCTCCCAGTGCAAGCAGACGTACTACT...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCCGGGACTGTACATCATaGAGACCACCACATCCACGG | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISRDCTS*RPPHPR Trigger: CCGTGGATGTGGTGGTCTGCATGATGTACAGTCCCG...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTTGGGTTTCCTGTTGGTaGCGGCTTCCTGTCTCCTTT | + |
Preference number: 4 (lower is better) Translates to: THNSFSGLAFAVSFFPVFWVSCW*RLPVSF Trigger: AAAGGAGACAGGAAGCCGCCACCAACAGGAAACCCA...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGCACTCTTCACTTCAATaGCCTTTGTTTCAAATGGTG | + |
Preference number: 4 (lower is better) Translates to: KHLTRPLLALSLRSCLMLHSSLQ*PLFQMV Trigger: CACCATTTGAAACAAAGGCCATTGAAGTGAAGAGTG...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCTCAAAGTCAGCACTTTaGGGATCAGGGCATTTCTGT | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHISKSAL*GSGHFC Trigger: ACAGAAATGCCCTGATCCCCAAAGTGCTGACTTTGA...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGAAAGTCCTCTGGTGTCTaGATGTGGGCAACCACGCCA | + |
Preference number: 4 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGKSSGV*MWATTP Trigger: TGGCGTGGTTGCCCACATCCAGACACCAGAGGACTT...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGAGGATGGGCTGCACTCTaGAAAGAGGCAGGGTTTCGA | + |
Preference number: 4 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGGWAAL*KEAGFR Trigger: TCGAAACCCTGCCTCTTTCCAGAGTGCAGCCCATCC...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGAGACAACAGCAGGGTTTaGAGAGACCACCGAACTGTC | + |
Preference number: 4 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGDNSRV*RDHRTV Trigger: GACAGTTCGGTGGTCTCTTCAAACCCTGCTGTTGTC...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGATCTCCATGGTTTTCTTaGGTTGGAGACTTCTCAAAT | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRSPWFS*VGDFSN Trigger: ATTTGAGAAGTCTCCAACTCAAGAAAACCATGGAGA...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCTCTCCATGGTTTTCTTaGGTTGGAGACTTCTCAAAT | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESSPWFS*VGDFSN Trigger: ATTTGAGAAGTCTCCAACTCAAGAAAACCATGGAGA...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCCAAACAGAAGGGCCTTaGCAGCTGCAACACAGCCTT | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISQTEGP*QLQHSL Trigger: AAGGCTGTGTTGCAGCTGTCAAGGCCCTTCTGTTTG...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCACACACAGCTTCTCTTaGTTTTCTGACATTTCACTG | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESTHSFS*FSDISL Trigger: CAGTGAAATGTCAGAAAATCAAGAGAAGCTGTGTGT...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGAACATTTTTCAACTaGCACTGCGTGGACATTCTT | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRRTFFN*HCVDIL Trigger: AAGAATGTCCACGCAGTGTCAGTTGAAAAATGTTCT...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCGGGGTGGTTATGCTGTaGTACAGGACTTCTGAGAGG | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISGVVML*YRTSER Trigger: CCTCTCAGAAGTCCTGTAGCACAGCATAACCACCCC...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGATTCAGGCACCACATTTaGATATGTCTCTTTCAAGCT | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRFRHHI*ICLFQA Trigger: AGCTTGAAAGAGACATATGCAAATGTGGTGCCTGAA...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGAAAGGGCCTTGACAGCTaGAACACAGCCTTCACTCCA | + |
Preference number: 4 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGKGLDS*NTAFTP Trigger: TGGAGTGAAGGCTGTGTTGCAGCTGTCAAGGCCCTT...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
||
CDS-3UTR GCA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTAGCACATGGTCCAGCTaGTTTCCTGAGCTCTGTAGA | + |
Preference number: 4 (lower is better) Translates to: THNSFSGLAFAVSFFPVFSTWSS*FPELCR Trigger: TCTACAGAGCTCAGGAAAGCAGCTGGACCATGTGCT...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
||
CDS-3UTR GCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCTCCAACGTCCTCCAATaGACTGTGGTCCACACTCTG | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISSNVLQ*TVVHTL Trigger: CAGAGTGTGGACCACAGTGCATTGGAGGACGTTGGA...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
||
CDS-3UTR GCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCACTGCTGCCTTTATCTaGCACGTCCTTTTCTTTGAT | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHITAAFI*HVLFFD Trigger: ATCAAAGAAAAGGACGTGGCAGATAAAGGCAGCAGT...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
||
CDS-3UTR GCA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTAGAAGTGAGGTTTTCTaGCAGGCCACACATCACCAG | + |
Preference number: 4 (lower is better) Translates to: THNSFSGLAFAVSFFPVFRSEVF*QATHHQ Trigger: CTGGTGATGTGTGGCCTGGCAGAAAACCTCACTTCT...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
||
CDS-3UTR CCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCTGGGTTTCCTGTTGGTaGCGGCTTCCTGTCTCCTTT | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISWVSCW*RLPVSF Trigger: AAAGGAGACAGGAAGCCGCCACCAACAGGAAACCCA...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
||
CDS-3UTR CCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAAAACAGGCCACAGCGGTaGCAGGTTGTTGACCGAAGG | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQNRPQR*QVVDRR Trigger: CCTTCGGTCAACAACCTGCCACCGCTGTGGCCTGTT...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
||
CDS-3UTR CCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCCACTCTTCACTTCAATaGCCTTTGTTTCAAATGGTG | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESHSSLQ*PLFQMV Trigger: CACCATTTGAAACAAAGGCCATTGAAGTGAAGAGTG...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
||
CDS-3UTR CCA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTCCACGGCTTGTACTATaGCTCTGTTCCAGGTCTGAT | + |
Preference number: 4 (lower is better) Translates to: THNSFSGLAFAVSFFPVFPRLVL*LCSRSD Trigger: ATCAGACCTGGAACAGAGCCATAGTACAAGCCGTGG...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
||
CDS-3UTR CCA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTACAACTTTGGAATTATaGGACAAAGTCTTTTCAGAC | + |
Preference number: 4 (lower is better) Translates to: QLPTTPIHATPSLLLFSTTTLEL*DKVFSD Trigger: GTCTGAAAAGACTTTGTCCCATAATTCCAAAGTTGT...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
||
CDS-3UTR CCA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGACTGGCTTGCACCCTGTaGCTGTCGATCTGCTTATGT | + |
Preference number: 4 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGLACTL*LSICLC Trigger: ACATAAGCAGATCGACAGCCACAGGGTGCAAGCCAG...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCCTGGCTTGCACCCTGTaGCTGTCGATCTGCTTATGT | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISLACTL*LSICLC Trigger: ACATAAGCAGATCGACAGCCACAGGGTGCAAGCCAG...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCTCAACTGACACTGCGTaGACATTCTTTGAAATGGCT | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHISTDTA*TFFEMA Trigger: AGCCATTTCAAAGAATGTCCACGCAGTGTCAGTTGA...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCTCTCCATGGTTTTCTTaGGTTGGAGACTTCTCAAAT | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHISPWFS*VGDFSN Trigger: ATTTGAGAAGTCTCCAACTCAAGAAAACCATGGAGA...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCACACACAGCTTCTCTTaGTTTTCTGACATTTCACTG | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHITHSFS*FSDISL Trigger: CAGTGAAATGTCAGAAAATCAAGAGAAGCTGTGTGT...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCGATTCTCAGCTATATTaGTCATTCCGTTCTCAGAAC | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHIDSQLY*SFRSQN Trigger: GTTCTGAGAACGGAATGATCAATATAGCTGAGAATC...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGAGCTTTTTCATCTCTGTaGATTTACTTTGGTTGGTTG | + |
Preference number: 4 (lower is better) Translates to: SAHPWSEPQVTQENMPPRAFSSL*IYFGWL Trigger: CAACCAACCAAAGTAAATTCACAGAGATGAAAAAGC...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCGCTTTTTCATCTCTGTaGATTTACTTTGGTTGGTTG | + |
Preference number: 4 (lower is better) Translates to: ATSYPGKHATQKQGTKESAFSSL*IYFGWL Trigger: CAACCAACCAAAGTAAATTCACAGAGATGAAAAAGC...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCAAGGTGGGGTGGTTATaGTGTGCTACAGGACTTCTG | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISKVGWL*CATGLL Trigger: CAGAAGTCCTGTAGCACAGCATAACCACCCCACCTT...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCAGCACATGGTCCAGCTaGTTTCCTGAGCTCTGTAGA | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISSTWSS*FPELCR Trigger: TCTACAGAGCTCAGGAAAGCAGCTGGACCATGTGCT...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCCTGTGTGCATACTGCTaGCTTTATCTGCCACGTCCT | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISLCAYC*LYLPRP Trigger: AGGACGTGGCAGATAAAGGCAGCAGTATGCACACAG...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTGGAACACTGGCTGTGTaGATACTGCTGCCTTTATCT | + |
Preference number: 4 (lower is better) Translates to: THNSFSGLAFAVSFFPVFGTLAV*ILLPLS Trigger: AGATAAAGGCAGCAGTATGCACACAGCCAGTGTTCC...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAACGGGACTGTACATCATaGAGACCACCACATCCACGG | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQRDCTS*RPPHPR Trigger: CCGTGGATGTGGTGGTCTGCATGATGTACAGTCCCG...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCGAGCCCCACAACACATaGTTGAAATCTTGCTGTGGC | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISEPHNT*LKSCCG Trigger: GCCACAGCAAGATTTCAAGCATGTGTTGTGGGGCTC...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGACCACGGCTTGTACTATaGCTCTGTTCCAGGTCTGAT | + |
Preference number: 4 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGPRLVL*LCSRSD Trigger: ATCAGACCTGGAACAGAGCCATAGTACAAGCCGTGG...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGAATTTCCACCAGCACATaGTCCAGCTGCTTTCCTGAG | + |
Preference number: 4 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGISTST*SSCFPE Trigger: CTCAGGAAAGCAGCTGGACCATGTGCTGGTGGAAAT...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAATGGCCAAGGGAACACTaGCTGTGTGCATACTGCTGC | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQWPREH*LCAYCC Trigger: GCAGCAGTATGCACACAGCCAGTGTTCCCTTGGCCA...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTACGTTTCCAGAACAATaGCCCGGTACCAGAAGTCAT | + |
Preference number: 4 (lower is better) Translates to: THNSFSGLAFAVSFFPVFTFPEQ*PGTRSH Trigger: ATGACTTCTGGTACCGGGCCATTGTTCTGGAAACGT...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCCACTCTGGTTCAGCATaGCATTTCTCAGCAGCTCCA | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISHSGSA*HFSAAP Trigger: TGGAGCTGCTGAGAAATGCCATGCTGAACCAGAGTG...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTGAGAGAACCACACTCTaGTTCAGCATGGCATTTCTC | + |
Preference number: 4 (lower is better) Translates to: THNSFSGLAFAVSFFPVFERTTL*FSMAFL Trigger: GAGAAATGCCATGCTGAACCAGAGTGTGGTTCTCTC...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTGCAGTCTCTGCTGTGTaGTATCTCTTTAGTGGAAGC | + |
Preference number: 4 (lower is better) Translates to: THNSFSGLAFAVSFFPVFAVSAV*YLFSGS Trigger: GCTTCCACTAAAGAGATACCACACAGCAGAGACTGC...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAAGACAACAGCAGGGTTTaGAGAGACCACCGAACTGTC | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQDNSRV*RDHRTV Trigger: GACAGTTCGGTGGTCTCTTCAAACCCTGCTGTTGTC...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTGCGGTCCTAACGAGTTaGAGAGTGCTGGATTATTTA | + |
Preference number: 4 (lower is better) Translates to: THNSFSGLAFAVSFFPVFAVLTS*RVLDYL Trigger: TAAATAATCCAGCACTCTTCAACTCGTTAGGACCGC...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCAAAGTCTTTTCAGACTaGGAATCTCAAAGTTCCCAT | + |
Preference number: 4 (lower is better) Translates to: SKMKSQAIQAQLREAVHIKVFSD*ESQSSH Trigger: ATGGGAACTTTGAGATTCTCAGTCTGAAAAGACTTT...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAATCCAACGTCCTCCAATaGACTGTGGTCCACACTCTG | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQSNVLQ*TVVHTL Trigger: CAGAGTGTGGACCACAGTGCATTGGAGGACGTTGGA...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTCACCTTAAGACCAACTaGTCTCTGATGAGCACATCA | + |
Preference number: 4 (lower is better) Translates to: THNSFSGLAFAVSFFPVFHLKTN*SLMSTS Trigger: TGATGTGCTCATCAGAGAGCAGTTGGTCTTAAGGTG...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCTGTATTCCCGTTCTCTaGGCTTTTCAGCCTGAAGGT | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISCIPVL*AFQPEG Trigger: ACCTTCAGGCTGAAAAGCCCAGAGAACGGGAATACA...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAATGGGTTTCCTGTTGGTaGCGGCTTCCTGTCTCCTTT | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQWVSCW*RLPVSF Trigger: AAAGGAGACAGGAAGCCGCCACCAACAGGAAACCCA...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAATCAATGTACAGGACGTaGGCCTTCCTCTGCAGCACA | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQSMYRT*AFLCST Trigger: TGTGCTGCAGAGGAAGGCCCACGTCCTGTACATTGA...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
||
CDS-3UTR CCA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGAACAAAAGAAGTCCTCTaGTGTCTGGATGTGGGCAAC | + |
Preference number: 4 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGTKEVL*CLDVGN Trigger: GTTGCCCACATCCAGACACCAGAGGACTTCTTTTGT...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCTCGAGCTTCTATACTCAACAACTTTGGAATTATaGGACAAAGTCTTTTCAGAC | + |
Preference number: 4 (lower is better) Translates to: QRKRRACLVHERLELLYSTTLEL*DKVFSD Trigger: GTCTGAAAAGACTTTGTCCCATAATTCCAAAGTTGT...TGAGTATAGAAGCTCGAGCCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGAACGTTTCCAGAACAATaGCCCGGTACCAGAAGTCAT | + |
Preference number: 4 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGTFPEQ*PGTRSH Trigger: ATGACTTCTGGTACCGGGCCATTGTTCTGGAAACGT...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGAGAGAGAACCACACTCTaGTTCAGCATGGCATTTCTC | + |
Preference number: 4 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGERTTL*FSMAFL Trigger: GAGAAATGCCATGCTGAACCAGAGTGTGGTTCTCTC...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCGCGGTCCTAACGAGTTaGAGAGTGCTGGATTATTTA | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISAVLTS*RVLDYL Trigger: TAAATAATCCAGCACTCTTCAACTCGTTAGGACCGC...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAATTGGTAAGATCTCCTTaGCTAGAGCCCGGTACCAGT | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQLVRSP*LEPGTS Trigger: ACTGGTACCGGGCTCTAGTCAAGGAGATCTTACCAA...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCCTTCTCTTGATTTTCTaGCATTTCACTGGGGATGGC | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISLLLIF*HFTGDG Trigger: GCCATCCCCAGTGAAATGTCAGAAAATCAAGAGAAG...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAAAGCACATGGTCCAGCTaGTTTCCTGAGCTCTGTAGA | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQSTWSS*FPELCR Trigger: TCTACAGAGCTCAGGAAAGCAGCTGGACCATGTGCT...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAAAGAAGTGAGGTTTTCTaGCAGGCCACACATCACCAG | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQRSEVF*QATHHQ Trigger: CTGGTGATGTGTGGCCTGGCAGAAAACCTCACTTCT...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGAGTTTCTGTAACTCTGTaGAACAGCAGTCTCTGCTGT | + |
Preference number: 4 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGVSVTL*NSSLCC Trigger: ACAGCAGAGACTGCTGTTGCACAGAGTTACAGAAAC...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAAGAGCGTGGAATCACATaGCCACAGTATTCACTGAGG | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQERGIT*PQYSLR Trigger: CCTCAGTGAATACTGTGGCCATGTGATTCCACGCTC...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAACACGTCCCCAATGGTTaGATAAAAGTCAGAGCGTGG | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQHVPNG*IKVRAW Trigger: CCACGCTCTGACTTTTATCCAACCATTGGGGACGTG...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTAGAACATTTTTCAACTaGCACTGCGTGGACATTCTT | + |
Preference number: 4 (lower is better) Translates to: THNSFSGLAFAVSFFPVFRTFFN*HCVDIL Trigger: AAGAATGTCCACGCAGTGTCAGTTGAAAAATGTTCT...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCACTGCTGCCTTTATCTaGCACGTCCTTTTCTTTGAT | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISTAAFI*HVLFFD Trigger: ATCAAAGAAAAGGACGTGGCAGATAAAGGCAGCAGT...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGAGATCAACTGTGTATTTaGCAACACAAACTTCCCCCT | + |
Preference number: 4 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGDQLCI*QHKLPP Trigger: AGGGGGAAGTTTGTGTTGCCAAATACACAGTTGATC...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCACACACAGCACTTTATaGCAGAAGGAGGAAACAAGT | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISTHSTL*QKEETS Trigger: ACTTGTTTCCTCCTTCTGCCATAAAGTGCTGTGTGT...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAAACAAAAGAAGTCCTCTaGTGTCTGGATGTGGGCAAC | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQTKEVL*CLDVGN Trigger: GTTGCCCACATCCAGACACCAGAGGACTTCTTTTGT...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGACTTGAAATCTTGCTGTaGCCTCTTTTGTCCAATGCT | + |
Preference number: 4 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGLEILL*PLLSNA Trigger: AGCATTGGACAAAAGAGGCCACAGCAAGATTTCAAG...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAACTTCTCTTGATTTTCTaGCATTTCACTGGGGATGGC | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQLLLIF*HFTGDG Trigger: GCCATCCCCAGTGAAATGTCAGAAAATCAAGAGAAG...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGAGATTCTCAGCTATATTaGTCATTCCGTTCTCAGAAC | + |
Preference number: 4 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGDSQLY*SFRSQN Trigger: GTTCTGAGAACGGAATGATCAATATAGCTGAGAATC...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTGCTTTTTCATCTCTGTaGATTTACTTTGGTTGGTTG | + |
Preference number: 4 (lower is better) Translates to: THNSFSGLAFAVSFFPVFAFSSL*IYFGWL Trigger: CAACCAACCAAAGTAAATTCACAGAGATGAAAAAGC...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCTTCAGGCACCACATTTaGATATGTCTCTTTCAAGCT | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISFRHHI*ICLFQA Trigger: AGCTTGAAAGAGACATATGCAAATGTGGTGCCTGAA...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAAGTTTCTGTAACTCTGTaGAACAGCAGTCTCTGCTGT | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQVSVTL*NSSLCC Trigger: ACAGCAGAGACTGCTGTTGCACAGAGTTACAGAAAC...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAATTTCTGACATTTCACTaGGGATGGCGTAGAACAAGG | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQFLTFH*GWRRTR Trigger: CCTTGTTCTACGCCATCCCCAGTGAAATGTCAGAAA...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGAGGACATTCTTTGAAATaGCTTTCACAGAGAGAACCA | + |
Preference number: 4 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGGHSLK*LSQREP Trigger: TGGTTCTCTCTGTGAAAGCCATTTCAAAGAATGTCC...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGAAAAGTCTTTTCAGACTaGGAATCTCAAAGTTCCCAT | + |
Preference number: 4 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGKVFSD*ESQSSH Trigger: ATGGGAACTTTGAGATTCTCAGTCTGAAAAGACTTT...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGAGCTTTTTCATCTCTGTaGATTTACTTTGGTTGGTTG | + |
Preference number: 4 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGAFSSL*IYFGWL Trigger: CAACCAACCAAAGTAAATTCACAGAGATGAAAAAGC...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTAAAATTAAATGGCTCTaGCATTTTACAAGTAGAGGC | + |
Preference number: 4 (lower is better) Translates to: THNSFSGLAFAVSFFPVFKIKWL*HFTSRG Trigger: GCCTCTACTTGTAAAATGGCAGAGCCATTTAATTTT...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAACTTGAAATCTTGCTGTaGCCTCTTTTGTCCAATGCT | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQLEILL*PLLSNA Trigger: AGCATTGGACAAAAGAGGCCACAGCAAGATTTCAAG...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAATCAACTGACACTGCGTaGACATTCTTTGAAATGGCT | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQSTDTA*TFFEMA Trigger: AGCCATTTCAAAGAATGTCCACGCAGTGTCAGTTGA...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAAGATTCTCAGCTATATTaGTCATTCCGTTCTCAGAAC | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQDSQLY*SFRSQN Trigger: GTTCTGAGAACGGAATGATCAATATAGCTGAGAATC...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR GCA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCAAAATTAAATGGCTCTaGCATTTTACAAGTAGAGGC | + |
Preference number: 4 (lower is better) Translates to: NSFSGLAFAVSFFPVFISKIKWL*HFTSRG Trigger: GCCTCTACTTGTAAAATGGCAGAGCCATTTAATTTT...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAACACTCTTCACTTCAATaGCCTTTGTTTCAAATGGTG | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQHSSLQ*PLFQMV Trigger: CACCATTTGAAACAAAGGCCATTGAAGTGAAGAGTG...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAAGGACATTCTTTGAAATaGCTTTCACAGAGAGAACCA | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQGHSLK*LSQREP Trigger: TGGTTCTCTCTGTGAAAGCCATTTCAAAGAATGTCC...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR TCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAAAAAGTCTTTTCAGACTaGGAATCTCAAAGTTCCCAT | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQKVFSD*ESQSSH Trigger: ATGGGAACTTTGAGATTCTCAGTCTGAAAAGACTTT...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CCA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAAACAACTTTGGAATTATaGGACAAAGTCTTTTCAGAC | + |
Preference number: 4 (lower is better) Translates to: LYCLNQDKLNCLRHINIQTTLEL*DKVFSD Trigger: GTCTGAAAAGACTTTGTCCCATAATTCCAAAGTTGT...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 90 bp | ACCAGTCTCTCCTCTGGCAGGCCGTGGAGCAGTAGTACGTCTGCTTaGACTGGGAGCACCTCAGCGACCCAAACAGGCCACAGCGGTGGC | + |
Preference number: 5 (lower is better) Translates to: TSLSSGRPWSSSTSA*TGSTSATQTGHSGG Trigger: GCCACCGCTGTGGCCTGTTTGGGTCGCTGAGGTGCTCCCAGTGCAAGCAGACGTACTACTGCTCCACGGCCTGCCAGAGGAGAGACTGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 90 bp | TACAGATGGTGCTGTGGGAAGACCAGTCTCTCCTCTGGCAGGCCGTaGAGCAGTAGTACGTCTGCTTGCACTGGGAGCACCTCAGCGACC | + |
Preference number: 5 (lower is better) Translates to: YRWCCGKTSLSSGRP*SSSTSACTGSTSAT Trigger: GGTCGCTGAGGTGCTCCCAGTGCAAGCAGACGTACTACTGCTCCACGGCCTGCCAGAGGAGAGACTGGTCTTCCCACAGCACCATCTGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 90 bp | CTTCCATTCAGCTCCATCGGCCCCTCTAGTGAGCATCTAATGATCTaGAAGGGCAGCTCCAGGTGGCTGGCTGGGATGGGCTGCACTCTG | + |
Preference number: 5 (lower is better) Translates to: LPFSSIGPSSEHLMI*KGSSRWLAGMGCTL Trigger: CAGAGTGCAGCCCATCCCAGCCAGCCACCTGGAGCTGCCCTTCCAGATCATTAGATGCTCACTAGAGGGGCCGATGGAGCTGAATGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCCAGCACATCCACGGCTaGTACTATGGCTCTGTTCCA | + |
Preference number: 5 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGQHIHG*YYGSVP Trigger: TGGAACAGAGCCATAGTACAAGCCGTGGATGTGCTG...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS TCA 90 bp | TTGATGGCAAAGCCCGAGTCTATGAGAGCTTTAGAAGCGCTGACGTaGGGAGCCACCGACTTGTCGATGAGCTCCACCAGGGCCCTGGTC | + |
Preference number: 5 (lower is better) Translates to: LMAKPESMRALEALT*GATDLSMSSTRALV Trigger: GACCAGGGCCCTGGTGGAGCTCATCGACAAGTCGGTGGCTCCTCACGTCAGCGCTTCTAAAGCTCTCATAGACTCGGGCTTTGCCATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 90 bp | CTCGTCAACAGTGAACTCCACCCACGTCCACTCCAACGCCTCTGCTaGACCTTCAATGGCCAAGGGAACACTGGCTGTGTGCATACTGCT | + |
Preference number: 5 (lower is better) Translates to: LVNSELHPRPLQRLC*TFNGQGNTGCVHTA Trigger: AGCAGTATGCACACAGCCAGTGTTCCCTTGGCCATTGAAGGTCCAGCAGAGGCGTTGGAGTGGACGTGGGTGGAGTTCACTGTTGACGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGGCTTCCTGTCTCCTTaGGACCCACCGACTTCTCCA | + |
Preference number: 5 (lower is better) Translates to: QLPTTPIHATPSLLLFSTGFLSP*DPPTSP Trigger: TGGAGAAGTCGGTGGGTCCAAAGGAGACAGGAAGCC...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS TCA 90 bp | TTGGTGGCGGCTTCCTGTCTCCTTTGGACCCACCGACTTCTCCATTaGCAACAGCAGGGTTTGAAGAGACCACCGAACTGTCCTCCTGAC | + |
Preference number: 5 (lower is better) Translates to: LVAASCLLWTHRLLH*QQQGLKRPPNCPPD Trigger: GTCAGGAGGACAGTTCGGTGGTCTCTTCAAACCCTGCTGTTGTCAATGGAGAAGTCGGTGGGTCCAAAGGAGACAGGAAGCCGCCACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 90 bp | TGTCACAATCTTGCTCTCAACTGTCACTCTTCCAACGTCCTCCAATaGACTGTGGTCCACACTCTGCTCCGTGGAGCTCTGCTCACCGGG | + |
Preference number: 5 (lower is better) Translates to: CHNLALNCHSSNVLQ*TVVHTLLRGALLTG Trigger: CCCGGTGAGCAGAGCTCCACGGAGCAGAGTGTGGACCACAGTGCATTGGAGGACGTTGGAAGAGTGACAGTTGAGAGCAAGATTGTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTTCCTGGGGCGGGGGCTaGCTTTCCTTCTTCTCAAAA | + |
Preference number: 5 (lower is better) Translates to: QLPTTPIHATPSLLLFSTSWGGG*LSFFSK Trigger: TTTTGAGAAGAAGGAAAGCAAGCCCCCGCCCCAGGA...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGGGCTTCCTGTCTCCTTaGGACCCACCGACTTCTCCA | + |
Preference number: 5 (lower is better) Translates to: KHLTRPLLALSLRSCLMLGFLSP*DPPTSP Trigger: TGGAGAAGTCGGTGGGTCCAAAGGAGACAGGAAGCC...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCCTGCGTGGACATTCTTaGAAATGGCTTTCACAGAGA | + |
Preference number: 5 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGLRGHS*KWLSQR Trigger: TCTCTGTGAAAGCCATTTCAAAGAATGTCCACGCAG...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS TCA 90 bp | GCTGAAGGGCTGGCTTGCACCCTGTGGCTGTCGATCTGCTTATGTTaGTTAGCAGGTCTGCTCATCAGTGAGTCCTGTGGTGAACCACAC | + |
Preference number: 5 (lower is better) Translates to: AEGLACTLWLSICLC*LAGLLISESCGEPH Trigger: GTGTGGTTCACCACAGGACTCACTGATGAGCAGACCTGCTAATCAACATAAGCAGATCGACAGCCACAGGGTGCAAGCCAGCCCTTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 90 bp | CCGGGTTTCACTCCATACCCCATTTCCACCAGCACATGGTCCAGCTaGTTTCCTGAGCTCTGTAGAACAAGGTCAACGGCACAGGTGAGT | + |
Preference number: 5 (lower is better) Translates to: PGFTPYPISTSTWSS*FPELCRTRSTAQVS Trigger: ACTCACCTGTGCCGTTGACCTTGTTCTACAGAGCTCAGGAAAGCAGCTGGACCATGTGCTGGTGGAAATGGGGTATGGAGTGAAACCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 90 bp | CTCTGCTCACCGGGTTTCACTCCATACCCCATTTCCACCAGCACATaGTCCAGCTGCTTTCCTGAGCTCTGTAGAACAAGGTCAACGGCA | + |
Preference number: 5 (lower is better) Translates to: LCSPGFTPYPISTST*SSCFPELCRTRSTA Trigger: TGCCGTTGACCTTGTTCTACAGAGCTCAGGAAAGCAGCTGGACCATGTGCTGGTGGAAATGGGGTATGGAGTGAAACCCGGTGAGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCGGCTTCCTGTCTCCTTaGGACCCACCGACTTCTCCA | + |
Preference number: 5 (lower is better) Translates to: ATSYPGKHATQKQGTKESGFLSP*DPPTSP Trigger: TGGAGAAGTCGGTGGGTCCAAAGGAGACAGGAAGCC...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCAAGCTTGTTCAAACTTaGCTGTACAGGCCTACAGAT | + |
Preference number: 5 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGKLVQT*LYRPTD Trigger: ATCTGTAGGCCTGTACAGCAAAGTTTGAACAAGCTT...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGTCAAACAGAAGGGCCTaGACAGCTGCAACACAGCCT | + |
Preference number: 5 (lower is better) Translates to: RAGTVAQRKRRACLVHERSNRRA*TAATQP Trigger: AGGCTGTGTTGCAGCTGTCAAGGCCCTTCTGTTTGA...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTTCAAACAGAAGGGCCTaGACAGCTGCAACACAGCCT | + |
Preference number: 5 (lower is better) Translates to: QLPTTPIHATPSLLLFSTSNRRA*TAATQP Trigger: AGGCTGTGTTGCAGCTGTCAAGGCCCTTCTGTTTGA...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCTTGGTAAGATCTCCTaGACTAGAGCCCGGTACCAG | + |
Preference number: 5 (lower is better) Translates to: RAGTVAQRKRRACLVHERLGKIS*TRARYQ Trigger: CTGGTACCGGGCTCTAGTCAAGGAGATCTTACCAAG...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCCCCACAACACATGCTaGAAATCTTGCTGTGGCCTC | + |
Preference number: 5 (lower is better) Translates to: RAGTVAQRKRRACLVHERPHNTC*KSCCGL Trigger: GAGGCCACAGCAAGATTTCAAGCATGTGTTGTGGGG...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCTCCTGGGGCGGGGGCTaGCTTTCCTTCTTCTCAAAA | + |
Preference number: 5 (lower is better) Translates to: ATSYPGKHATQKQGTKESSWGGG*LSFFSK Trigger: TTTTGAGAAGAAGGAAAGCAAGCCCCCGCCCCAGGA...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGCAGCACATCCACGGCTaGTACTATGGCTCTGTTCCA | + |
Preference number: 5 (lower is better) Translates to: KHLTRPLLALSLRSCLMLQHIHG*YYGSVP Trigger: TGGAACAGAGCCATAGTACAAGCCGTGGATGTGCTG...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGCTTGGTAAGATCTCCTaGACTAGAGCCCGGTACCAG | + |
Preference number: 5 (lower is better) Translates to: KHLTRPLLALSLRSCLMLLGKIS*TRARYQ Trigger: CTGGTACCGGGCTCTAGTCAAGGAGATCTTACCAAG...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS TCA 90 bp | TTGGATAAAAGTCAGAGCGTGGAATCACATGGCCACAGTATTCACTaGGGGATTCCTGAAGCTCCGCAAGCTTGTGGCCGCTCTGCAGCT | + |
Preference number: 5 (lower is better) Translates to: LDKSQSVESHGHSIH*GIPEAPQACGRSAA Trigger: AGCTGCAGAGCGGCCACAAGCTTGCGGAGCTTCAGGAATCCCTCAGTGAATACTGTGGCCATGTGATTCCACGCTCTGACTTTTATCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 90 bp | AACGCCTCTGCTGGACCTTCAATGGCCAAGGGAACACTGGCTGTGTaGATACTGCTGCCTTTATCTGCCACGTCCTTTTCTTTGATGGCA | + |
Preference number: 5 (lower is better) Translates to: NASAGPSMAKGTLAV*ILLPLSATSFSLMA Trigger: TGCCATCAAAGAAAAGGACGTGGCAGATAAAGGCAGCAGTATGCACACAGCCAGTGTTCCCTTGGCCATTGAAGGTCCAGCAGAGGCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 90 bp | ACACTCTGGTTCAGCATGGCATTTCTCAGCAGCTCCATCACTAACTaGGAACAGCTTCCATTCAGCTCCATCGGCCCCTCTAGTGAGCAT | + |
Preference number: 5 (lower is better) Translates to: TLWFSMAFLSSSITN*EQLPFSSIGPSSEH Trigger: ATGCTCACTAGAGGGGCCGATGGAGCTGAATGGAAGCTGTTCGCAGTTAGTGATGGAGCTGCTGAGAAATGCCATGCTGAACCAGAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGGCGGTCCTAACGAGTaGAAGAGTGCTGGATTATTT | + |
Preference number: 5 (lower is better) Translates to: QLPTTPIHATPSLLLFSTGGPNE*KSAGLF Trigger: AAATAATCCAGCACTCTTCAACTCGTTAGGACCGCC...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | AGTGCACATCCTTGGAGTGAGCCACAAGTTACCCAGGAAAACATGCCACCCAGATCAAACAGAAGGGCCTaGACAGCTGCAACACAGCCT | + |
Preference number: 5 (lower is better) Translates to: SAHPWSEPQVTQENMPPRSNRRA*TAATQP Trigger: AGGCTGTGTTGCAGCTGTCAAGGCCCTTCTGTTTGA...TCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGCTCACTCCAAGGATGTGCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCCTTGGTAAGATCTCCTaGACTAGAGCCCGGTACCAG | + |
Preference number: 5 (lower is better) Translates to: ATSYPGKHATQKQGTKESLGKIS*TRARYQ Trigger: CTGGTACCGGGCTCTAGTCAAGGAGATCTTACCAAG...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | CGCATCGGGACGAGGCAGCAGATGACAGGGAGCGTCCCACTGGCAAAGAAAGGCTTTGCTGCTATAGTCTaGTTAACTGGCAATTCCATT | + |
Preference number: 5 (lower is better) Translates to: RIGTRQQMTGSVPLAKKGFAAIV*LTGNSI Trigger: AATGGAATTGCCAGTTAACAAGACTATAGCAGCAAA...GCCTTTCTTTGCCAGTGGGACGCTCCCTGTCATCTGCTGCCTCGTCCCGATGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 90 bp | AGTACCTCCTCCTCTAAGATGTCCATGACCTTGACAGAGCAGAACTaGTCAAACAGAAGGGCCTTGACAGCTGCAACACAGCCTTCACTC | + |
Preference number: 5 (lower is better) Translates to: STSSSKMSMTLTEQN*SNRRALTAATQPSL Trigger: GAGTGAAGGCTGTGTTGCAGCTGTCAAGGCCCTTCTGTTTGAGCAGTTCTGCTCTGTCAAGGTCATGGACATCTTAGAGGAGGAGGTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 90 bp | TTTGCTGCTATAGTCTTGTTAACTGGCAATTCCATTGTCTTCCACTaGTCTGCTGAAGGGCTGGCTTGCACCCTGTGGCTGTCGATCTGC | + |
Preference number: 5 (lower is better) Translates to: FAAIVLLTGNSIVFH*SAEGLACTLWLSIC Trigger: GCAGATCGACAGCCACAGGGTGCAAGCCAGCCCTTCAGCAGAGCAGTGGAAGACAATGGAATTGCCAGTTAACAAGACTATAGCAGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 90 bp | TATTATCTTCAAGCTTGTTCAAACTTTGCTGTACAGGCCTACAGATaGTGCTGTGGGAAGACCAGTCTCTCCTCTGGCAGGCCGTGGAGC | + |
Preference number: 5 (lower is better) Translates to: YYLQACSNFAVQAYR*CCGKTSLSSGRPWS Trigger: GCTCCACGGCCTGCCAGAGGAGAGACTGGTCTTCCCACAGCACCATCTGTAGGCCTGTACAGCAAAGTTTGAACAAGCTTGAAGATAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCCTTGGTAAGATCTCCTaGACTAGAGCCCGGTACCAG | + |
Preference number: 5 (lower is better) Translates to: SKMKSQAIQAQLREAVHILGKIS*TRARYQ Trigger: CTGGTACCGGGCTCTAGTCAAGGAGATCTTACCAAG...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCGGCGGTCCTAACGAGTaGAAGAGTGCTGGATTATTT | + |
Preference number: 5 (lower is better) Translates to: ATSYPGKHATQKQGTKESGGPNE*KSAGLF Trigger: AAATAATCCAGCACTCTTCAACTCGTTAGGACCGCC...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 90 bp | CAACCACGCCACAGAACTCATCACCCACATTCAAAGTCAGCACTTTaGGGATCAGGGCATTTCTGTCTGTCACAATCTTGCTCTCAACTG | + |
Preference number: 5 (lower is better) Translates to: QPRHRTHHPHSKSAL*GSGHFCLSQSCSQL Trigger: CAGTTGAGAGCAAGATTGTGACAGACAGAAATGCCCTGATCCCCAAAGTGCTGACTTTGAATGTGGGTGATGAGTTCTGTGGCGTGGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 90 bp | ACCACTGATCATCCTCTGAGAACTGAGCACAGCACACGTCCCCAATaGTTGGATAAAAGTCAGAGCGTGGAATCACATGGCCACAGTATT | + |
Preference number: 5 (lower is better) Translates to: TTDHPLRTEHSTRPQ*LDKSQSVESHGHSI Trigger: AATACTGTGGCCATGTGATTCCACGCTCTGACTTTTATCCAACCATTGGGGACGTGTGCTGTGCTCAGTTCTCAGAGGATGATCAGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCGGCTTCCTGTCTCCTTaGGACCCACCGACTTCTCCA | + |
Preference number: 5 (lower is better) Translates to: NSFSGLAFAVSFFPVFISGFLSP*DPPTSP Trigger: TGGAGAAGTCGGTGGGTCCAAAGGAGACAGGAAGCC...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCGGCGGTCCTAACGAGTaGAAGAGTGCTGGATTATTT | + |
Preference number: 5 (lower is better) Translates to: SKMKSQAIQAQLREAVHIGGPNE*KSAGLF Trigger: AAATAATCCAGCACTCTTCAACTCGTTAGGACCGCC...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | AGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTGCATGGTTTTCTTGAGTaGGAGACTTCTCAAATCAGA | + |
Preference number: 5 (lower is better) Translates to: SYRPHLSMQHLASSSSALHGFLE*ETSQIR Trigger: TCTGATTTGAGAAGTCTCCAACTCAAGAAAACCATG...CAGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | AGAGCTGGGACTGTAGCTCAGAGGAAGAGGAGAGCTTGCCTCGTACATGAGAGGCATGGTTTTCTTGAGTaGGAGACTTCTCAAATCAGA | + |
Preference number: 5 (lower is better) Translates to: RAGTVAQRKRRACLVHERHGFLE*ETSQIR Trigger: TCTGATTTGAGAAGTCTCCAACTCAAGAAAACCATG...CCTCTCATGTACGAGGCAAGCTCTCCTCTTCCTCTGAGCTACAGTCCCAGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 90 bp | GGTGATTTCCACAACTCTGGCTTGGAGTTTGAGCCCCACAACACATaGTTGAAATCTTGCTGTGGCCTCTTTTGTCCAATGCTTGTTTGG | + |
Preference number: 5 (lower is better) Translates to: GDFHNSGLEFEPHNT*LKSCCGLFCPMLVW Trigger: CCAAACAAGCATTGGACAAAAGAGGCCACAGCAAGATTTCAAGCATGTGTTGTGGGGCTCAAACTCCAAGCCAGAGTTGTGGAAATCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 90 bp | GCGTGGACATTCTTTGAAATGGCTTTCACAGAGAGAACCACACTCTaGTTCAGCATGGCATTTCTCAGCAGCTCCATCACTAACTGCGAA | + |
Preference number: 5 (lower is better) Translates to: AWTFFEMAFTERTTL*FSMAFLSSSITNCE Trigger: TTCGCAGTTAGTGATGGAGCTGCTGAGAAATGCCATGCTGAACCAGAGTGTGGTTCTCTCTGTGAAAGCCATTTCAAAGAATGTCCACGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCTCCTGGGGCGGGGGCTaGCTTTCCTTCTTCTCAAAA | + |
Preference number: 5 (lower is better) Translates to: NSFSGLAFAVSFFPVFISSWGGG*LSFFSK Trigger: TTTTGAGAAGAAGGAAAGCAAGCCCCCGCCCCAGGA...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGATCCTGGGGCGGGGGCTaGCTTTCCTTCTTCTCAAAA | + |
Preference number: 5 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGSWGGG*LSFFSK Trigger: TTTTGAGAAGAAGGAAAGCAAGCCCCCGCCCCAGGA...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | TCCAAGATGAAAAGCCAAGCCATCCAAGCACAGCTGAGAGAAGCAGTGCACATCGCAAAAAGTTGTTCTTaGTATTCCCGTTCTCTGGGC | + |
Preference number: 5 (lower is better) Translates to: SKMKSQAIQAQLREAVHIAKSCS*YSRSLG Trigger: GCCCAGAGAACGGGAATACAAAGAACAACTTTTTGC...GATGTGCACTGCTTCTCTCAGCTGTGCTTGGATGGCTTGGCTTTTCATCTTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCAAGCTTGTTCAAACTTaGCTGTACAGGCCTACAGAT | + |
Preference number: 5 (lower is better) Translates to: ATSYPGKHATQKQGTKESKLVQT*LYRPTD Trigger: ATCTGTAGGCCTGTACAGCAAAGTTTGAACAAGCTT...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGCATGGTTTTCTTGAGTaGGAGACTTCTCAAATCAGA | + |
Preference number: 5 (lower is better) Translates to: KHLTRPLLALSLRSCLMLHGFLE*ETSQIR Trigger: TCTGATTTGAGAAGTCTCCAACTCAAGAAAACCATG...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTCAGCACATCCACGGCTaGTACTATGGCTCTGTTCCA | + |
Preference number: 5 (lower is better) Translates to: THNSFSGLAFAVSFFPVFQHIHG*YYGSVP Trigger: TGGAACAGAGCCATAGTACAAGCCGTGGATGTGCTG...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTCCCCACAACACATGCTaGAAATCTTGCTGTGGCCTC | + |
Preference number: 5 (lower is better) Translates to: THNSFSGLAFAVSFFPVFPHNTC*KSCCGL Trigger: GAGGCCACAGCAAGATTTCAAGCATGTGTTGTGGGG...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | CAGCTACCGACCACACCTATCCATGCAACACCTAGCCTCCTCCTCTTCAGCACTAGATTCTCAGCTATATaGATCATTCCGTTCTCAGAA | + |
Preference number: 5 (lower is better) Translates to: QLPTTPIHATPSLLLFSTRFSAI*IIPFSE Trigger: TTCTGAGAACGGAATGATCAATATAGCTGAGAATCT...AGTGCTGAAGAGGAGGAGGCTAGGTGTTGCATGGATAGGTGTGGTCGGTAGCTG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCCATGGTTTTCTTGAGTaGGAGACTTCTCAAATCAGA | + |
Preference number: 5 (lower is better) Translates to: ATSYPGKHATQKQGTKESHGFLE*ETSQIR Trigger: TCTGATTTGAGAAGTCTCCAACTCAAGAAAACCATG...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGACAGCACATCCACGGCTaGTACTATGGCTCTGTTCCA | + |
Preference number: 5 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGQHIHG*YYGSVP Trigger: TGGAACAGAGCCATAGTACAAGCCGTGGATGTGCTG...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGACCCCACAACACATGCTaGAAATCTTGCTGTGGCCTC | + |
Preference number: 5 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGPHNTC*KSCCGL Trigger: GAGGCCACAGCAAGATTTCAAGCATGTGTTGTGGGG...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | AAGCATCTAACTAGGCCCTTGCTGGCTTTGAGCCTGAGGTCTTGCCTCATGCTGTTTGCTGCTATAGTCTaGTTAACTGGCAATTCCATT | + |
Preference number: 5 (lower is better) Translates to: KHLTRPLLALSLRSCLMLFAAIV*LTGNSI Trigger: AATGGAATTGCCAGTTAACAAGACTATAGCAGCAAA...CAGCATGAGGCAAGACCTCAGGCTCAAAGCCAGCAAGGGCCTAGTTAGATGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | GCCACAAGTTACCCAGGAAAACATGCCACCCAGAAGCAAGGAACCAAAGAGAGCTTTGCTGCTATAGTCTaGTTAACTGGCAATTCCATT | + |
Preference number: 5 (lower is better) Translates to: ATSYPGKHATQKQGTKESFAAIV*LTGNSI Trigger: AATGGAATTGCCAGTTAACAAGACTATAGCAGCAAA...GCTCTCTTTGGTTCCTTGCTTCTGGGTGGCATGTTTTCCTGGGTAACTTGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCGGCGGTCCTAACGAGTaGAAGAGTGCTGGATTATTT | + |
Preference number: 5 (lower is better) Translates to: NSFSGLAFAVSFFPVFISGGPNE*KSAGLF Trigger: AAATAATCCAGCACTCTTCAACTCGTTAGGACCGCC...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | CTTTATTGCCTGAATCAGGACAAACTTAACTGTCTGAGACACATCAACATCCAACCCCACAACACATGCTaGAAATCTTGCTGTGGCCTC | + |
Preference number: 5 (lower is better) Translates to: LYCLNQDKLNCLRHINIQPHNTC*KSCCGL Trigger: GAGGCCACAGCAAGATTTCAAGCATGTGTTGTGGGG...TTGGATGTTGATGTGTCTCAGACAGTTAAGTTTGTCCTGATTCAGGCAATAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTCTGCGTGGACATTCTTaGAAATGGCTTTCACAGAGA | + |
Preference number: 5 (lower is better) Translates to: THNSFSGLAFAVSFFPVFLRGHS*KWLSQR Trigger: TCTCTGTGAAAGCCATTTCAAAGAATGTCCACGCAG...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 90 bp | ATTCCTAATGATGGCTTCACGCCTGCCAGCACACAATTTAGAGCTTaGATCGGCAAATCCAACAACTTTGGAATTATGGGACAAAGTCTT | + |
Preference number: 5 (lower is better) Translates to: IPNDGFTPASTQFRA*IGKSNNFGIMGQSL Trigger: AAGACTTTGTCCCATAATTCCAAAGTTGTTGGATTTGCCGATGCAAGCTCTAAATTGTGTGCTGGCAGGCGTGAAGCCATCATTAGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGACTGCGTGGACATTCTTaGAAATGGCTTTCACAGAGA | + |
Preference number: 5 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGLRGHS*KWLSQR Trigger: TCTCTGTGAAAGCCATTTCAAAGAATGTCCACGCAG...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCAAGCTTGTTCAAACTTaGCTGTACAGGCCTACAGAT | + |
Preference number: 5 (lower is better) Translates to: NSFSGLAFAVSFFPVFISKLVQT*LYRPTD Trigger: ATCTGTAGGCCTGTACAGCAAAGTTTGAACAAGCTT...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 90 bp | TTTGTTTCAAATGGTGATTTATTATCTTCAAGCTTGTTCAAACTTTaGTGTACAGGCCTACAGATGGTGCTGTGGGAAGACCAGTCTCTC | + |
Preference number: 5 (lower is better) Translates to: FVSNGDLLSSSLFKL*CTGLQMVLWEDQSL Trigger: GAGAGACTGGTCTTCCCACAGCACCATCTGTAGGCCTGTACAGCAAAGTTTGAACAAGCTTGAAGATAATAAATCACCATTTGAAACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 90 bp | AACTTCCCCCTTAACAGGAAGATAACCATCTTCAGGCACCACATTTaGATATGTCTCTTTCAAGCTTGTAGAGAGTTGGTTCATGTTTTC | + |
Preference number: 5 (lower is better) Translates to: NFPLNRKITIFRHHI*ICLFQACRELVHVF Trigger: GAAAACATGAACCAACTCTCTACAAGCTTGAAAGAGACATATGCAAATGTGGTGCCTGAAGATGGTTATCTTCCTGTTAAGGGGGAAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 90 bp | TTTGATTTTTCAGGAGTCACATTACTGCTGGGCTTAGTTTTTACTTaGTTAGGAGGTGAACTGTTTCCAAGACTTAATGGTGACACTGGG | + |
Preference number: 5 (lower is better) Translates to: FDFSGVTLLLGLVFT*LGGELFPRLNGDTG Trigger: CCCAGTGTCACCATTAAGTCTTGGAAACAGTTCACCTCCTAACCAAGTAAAAACTAAGCCCAGCAGTAATGTGACTCCTGAAAAATCAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | ACACACAATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTAGATTCTCAGCTATATaGATCATTCCGTTCTCAGAA | + |
Preference number: 5 (lower is better) Translates to: THNSFSGLAFAVSFFPVFRFSAI*IIPFSE Trigger: TTCTGAGAACGGAATGATCAATATAGCTGAGAATCT...AAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATTGTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS TCA 90 bp | GCAAATCCAACAACTTTGGAATTATGGGACAAAGTCTTTTCAGACTaGGAATCTCAAAGTTCCCATAATCGACATATCCAACCAGGACAG | + |
Preference number: 5 (lower is better) Translates to: ANPTTLELWDKVFSD*ESQSSHNRHIQPGQ Trigger: CTGTCCTGGTTGGATATGTCGATTATGGGAACTTTGAGATTCTCAGTCTGAAAAGACTTTGTCCCATAATTCCAAAGTTGTTGGATTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | AATTCTTTCTCAGGTCTGGCGTTTGCTGTCTCTTTCTTCCCAGTGTTTATTTCCTTTGCTGCTATAGTCTaGTTAACTGGCAATTCCATT | + |
Preference number: 5 (lower is better) Translates to: NSFSGLAFAVSFFPVFISFAAIV*LTGNSI Trigger: AATGGAATTGCCAGTTAACAAGACTATAGCAGCAAA...GGAAATAAACACTGGGAAGAAAGAGACAGCAAACGCCAGACCTGAGAAAGAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS-3UTR CAA 90 bp | ACCGCGCCTAGCTCATACATGAATCTCTTCTGTAAGATTCATGTATTTCGTGGAAGATTCTCAGCTATATaGATCATTCCGTTCTCAGAA | + |
Preference number: 5 (lower is better) Translates to: TAPSSYMNLFCKIHVFRGRFSAI*IIPFSE Trigger: TTCTGAGAACGGAATGATCAATATAGCTGAGAATCT...TCCACGAAATACATGAATCTTACAGAAGAGATTCATGTATGAGCTAGGCGCGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 72 bp | TGGGAGCACCTCAGCGACCCAAACAGGCCACAGCGGTaGCAGGTTGTTGACCGAAGGGGCGGTCCTAACGAG | + |
Preference number: 6 (lower is better) Translates to: WEHLSDPNRPQR*QVVDRRGGPNE Trigger: CTCGTTAGGACCGCCCCTTCGGTCAACAACCTGCCACCGCTGTGGCCTGTTTGGGTCGCTGAGGTGCTCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 72 bp | TCCTCTGGCAGGCCGTGGAGCAGTAGTACGTCTGCTTaGACTGGGAGCACCTCAGCGACCCAAACAGGCCAC | + |
Preference number: 6 (lower is better) Translates to: SSGRPWSSSTSA*TGSTSATQTGH Trigger: GTGGCCTGTTTGGGTCGCTGAGGTGCTCCCAGTGCAAGCAGACGTACTACTGCTCCACGGCCTGCCAGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 72 bp | AGCTCCATCGGCCCCTCTAGTGAGCATCTAATGATCTaGAAGGGCAGCTCCAGGTGGCTGGCTGGGATGGGC | + |
Preference number: 6 (lower is better) Translates to: SSIGPSSEHLMI*KGSSRWLAGMG Trigger: GCCCATCCCAGCCAGCCACCTGGAGCTGCCCTTCCAGATCATTAGATGCTCACTAGAGGGGCCGATGGAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS TCA 72 bp | GGCCAGAACCGAGGCGCGGTACCACTGATCATCCTCTaGGAACTGAGCACAGCACACGTCCCCAATGGTTGG | + |
Preference number: 6 (lower is better) Translates to: GQNRGAVPLIIL*ELSTAHVPNGW Trigger: CCAACCATTGGGGACGTGTGCTGTGCTCAGTTCTCAGAGGATGATCAGTGGTACCGCGCCTCGGTTCTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS TCA 72 bp | TCATGCAGACCACCACATCCACGGTCTCGTCAACAGTaGACTCCACCCACGTCCACTCCAACGCCTCTGCTG | + |
Preference number: 6 (lower is better) Translates to: SCRPPHPRSRQQ*TPPTSTPTPLL Trigger: CAGCAGAGGCGTTGGAGTGGACGTGGGTGGAGTTCACTGTTGACGAGACCGTGGATGTGGTGGTCTGCATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 72 bp | AGAGCAGAACTGCTCAAACAGAAGGGCCTTGACAGCTaGAACACAGCCTTCACTCCACTCGCCCGCAGTGGG | + |
Preference number: 6 (lower is better) Translates to: RAELLKQKGLDS*NTAFTPLARSG Trigger: CCCACTGCGGGCGAGTGGAGTGAAGGCTGTGTTGCAGCTGTCAAGGCCCTTCTGTTTGAGCAGTTCTGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 72 bp | AGTGAACTCCACCCACGTCCACTCCAACGCCTCTGCTaGACCTTCAATGGCCAAGGGAACACTGGCTGTGTG | + |
Preference number: 6 (lower is better) Translates to: SELHPRPLQRLC*TFNGQGNTGCV Trigger: CACACAGCCAGTGTTCCCTTGGCCATTGAAGGTCCAGCAGAGGCGTTGGAGTGGACGTGGGTGGAGTTCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 90 bp | GAGCTCCACGCCCACGCCGTTCGCGGTGATTTCCACAACTCTGGCTaGGAGTTTGAGCCCCACAACACATGCTTGAAATCTTGCTGTGGC | + |
Preference number: 6 (lower is better) Translates to: ELHAHAVRGDFHNSG*EFEPHNTCLKSCCG Trigger: GCCACAGCAAGATTTCAAGCATGTGTTGTGGGGCTCAAACTCCAAGCCAGAGTTGTGGAAATCACCGCGAACGGCGTGGGCGTGGAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS TCA 72 bp | GGAATCACATGGCCACAGTATTCACTGAGGGATTCCTaGAGCTCCGCAAGCTTGTGGCCGCTCTGCAGCTGC | + |
Preference number: 6 (lower is better) Translates to: GITWPQYSLRDS*SSASLWPLCSC Trigger: GCAGCTGCAGAGCGGCCACAAGCTTGCGGAGCTTCAGGAATCCCTCAGTGAATACTGTGGCCATGTGATTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 72 bp | AATGCACTGTGGTCCACACTCTGCTCCGTGGAGCTCTaGTCACCGGGTTTCACTCCATACCCCATTTCCACC | + |
Preference number: 6 (lower is better) Translates to: NALWSTLCSVEL*SPGFTPYPIST Trigger: GGTGGAAATGGGGTATGGAGTGAAACCCGGTGAGCAGAGCTCCACGGAGCAGAGTGTGGACCACAGTGCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 72 bp | AACAGTGAACTCCACCCACGTCCACTCCAACGCCTCTaGTGGACCTTCAATGGCCAAGGGAACACTGGCTGT | + |
Preference number: 6 (lower is better) Translates to: NSELHPRPLQRL*WTFNGQGNTGC Trigger: ACAGCCAGTGTTCCCTTGGCCATTGAAGGTCCAGCAGAGGCGTTGGAGTGGACGTGGGTGGAGTTCACTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 72 bp | ATTTGTGTACTTAGCACAGCACGCGTCGCCGGTCCGTaGTCTGTAGGCTGGCTGGCCCTTCTGAGCATTACA | + |
Preference number: 6 (lower is better) Translates to: ICVLSTARVAGP*SVGWLALLSIT Trigger: TGTAATGCTCAGAAGGGCCAGCCAGCCTACAGACCACGGACCGGCGACGCGTGCTGTGCTAAGTACACAAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 72 bp | ACTGGGTTTCCTGTTGGTGGCGGCTTCCTGTCTCCTTaGGACCCACCGACTTCTCCATTGACAACAGCAGGG | + |
Preference number: 6 (lower is better) Translates to: TGFPVGGGFLSP*DPPTSPLTTAG Trigger: CCCTGCTGTTGTCAATGGAGAAGTCGGTGGGTCCAAAGGAGACAGGAAGCCGCCACCAACAGGAAACCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 72 bp | CTTGCTCTCAACTGTCACTCTTCCAACGTCCTCCAATaGACTGTGGTCCACACTCTGCTCCGTGGAGCTCTG | + |
Preference number: 6 (lower is better) Translates to: LALNCHSSNVLQ*TVVHTLLRGAL Trigger: CAGAGCTCCACGGAGCAGAGTGTGGACCACAGTGCATTGGAGGACGTTGGAAGAGTGACAGTTGAGAGCAAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 72 bp | CAGGACGTGGGCCTTCCTCTGCAGCACATCCACGGCTaGTACTATGGCTCTGTTCCAGGTCTGATCAACTGT | + |
Preference number: 6 (lower is better) Translates to: QDVGLPLQHIHG*YYGSVPGLINC Trigger: ACAGTTGATCAGACCTGGAACAGAGCCATAGTACAAGCCGTGGATGTGCTGCAGAGGAAGGCCCACGTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 72 bp | ACCTTGACAGAGCAGAACTGCTCAAACAGAAGGGCCTaGACAGCTGCAACACAGCCTTCACTCCACTCGCCC | + |
Preference number: 6 (lower is better) Translates to: TLTEQNCSNRRA*TAATQPSLHSP Trigger: GGGCGAGTGGAGTGAAGGCTGTGTTGCAGCTGTCAAGGCCCTTCTGTTTGAGCAGTTCTGCTCTGTCAAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 72 bp | CCGGGTTTCACTCCATACCCCATTTCCACCAGCACATaGTCCAGCTGCTTTCCTGAGCTCTGTAGAACAAGG | + |
Preference number: 6 (lower is better) Translates to: PGFTPYPISTST*SSCFPELCRTR Trigger: CCTTGTTCTACAGAGCTCAGGAAAGCAGCTGGACCATGTGCTGGTGGAAATGGGGTATGGAGTGAAACCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 72 bp | GGCTTCCTGTCTCCTTTGGACCCACCGACTTCTCCATaGACAACAGCAGGGTTTGAAGAGACCACCGAACTG | + |
Preference number: 6 (lower is better) Translates to: GFLSPLDPPTSP*TTAGFEETTEL Trigger: CAGTTCGGTGGTCTCTTCAAACCCTGCTGTTGTCAATGGAGAAGTCGGTGGGTCCAAAGGAGACAGGAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 72 bp | GCCCACGCCGTTCGCGGTGATTTCCACAACTCTGGCTaGGAGTTTGAGCCCCACAACACATGCTTGAAATCT | + |
Preference number: 6 (lower is better) Translates to: AHAVRGDFHNSG*EFEPHNTCLKS Trigger: AGATTTCAAGCATGTGTTGTGGGGCTCAAACTCCAAGCCAGAGTTGTGGAAATCACCGCGAACGGCGTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS TCA 72 bp | GCTTCCTGTCTCCTTTGGACCCACCGACTTCTCCATTaGCAACAGCAGGGTTTGAAGAGACCACCGAACTGT | + |
Preference number: 6 (lower is better) Translates to: ASCLLWTHRLLH*QQQGLKRPPNC Trigger: ACAGTTCGGTGGTCTCTTCAAACCCTGCTGTTGTCAATGGAGAAGTCGGTGGGTCCAAAGGAGACAGGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 72 bp | ACTCCATACCCCATTTCCACCAGCACATGGTCCAGCTaGTTTCCTGAGCTCTGTAGAACAAGGTCAACGGCA | + |
Preference number: 6 (lower is better) Translates to: TPYPISTSTWSS*FPELCRTRSTA Trigger: TGCCGTTGACCTTGTTCTACAGAGCTCAGGAAAGCAGCTGGACCATGTGCTGGTGGAAATGGGGTATGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 72 bp | GGGAACACTGGCTGTGTGCATACTGCTGCCTTTATCTaGCACGTCCTTTTCTTTGATGGCAAAGCCCGAGTC | + |
Preference number: 6 (lower is better) Translates to: GNTGCVHTAAFI*HVLFFDGKARV Trigger: GACTCGGGCTTTGCCATCAAAGAAAAGGACGTGGCAGATAAAGGCAGCAGTATGCACACAGCCAGTGTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 72 bp | GGGCCTTCCTCTGCAGCACATCCACGGCTTGTACTATaGCTCTGTTCCAGGTCTGATCAACTGTGTATTTGG | + |
Preference number: 6 (lower is better) Translates to: GPSSAAHPRLVL*LCSRSDQLCIW Trigger: CCAAATACACAGTTGATCAGACCTGGAACAGAGCCATAGTACAAGCCGTGGATGTGCTGCAGAGGAAGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 72 bp | GCAATTCCATTGTCTTCCACTGCTCTGCTGAAGGGCTaGCTTGCACCCTGTGGCTGTCGATCTGCTTATGTT | + |
Preference number: 6 (lower is better) Translates to: AIPLSSTALLKG*LAPCGCRSAYV Trigger: AACATAAGCAGATCGACAGCCACAGGGTGCAAGCCAGCCCTTCAGCAGAGCAGTGGAAGACAATGGAATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 72 bp | TGTTTCCAAGACTTAATGGTGACACTGGGTTTCCTGTaGGTGGCGGCTTCCTGTCTCCTTTGGACCCACCGA | + |
Preference number: 6 (lower is better) Translates to: CFQDLMVTLGFL*VAASCLLWTHR Trigger: TCGGTGGGTCCAAAGGAGACAGGAAGCCGCCACCAACAGGAAACCCAGTGTCACCATTAAGTCTTGGAAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 90 bp | GAGGTGAACTGTTTCCAAGACTTAATGGTGACACTGGGTTTCCTGTaGGTGGCGGCTTCCTGTCTCCTTTGGACCCACCGACTTCTCCAT | + |
Preference number: 6 (lower is better) Translates to: EVNCFQDLMVTLGFL*VAASCLLWTHRLLH Trigger: ATGGAGAAGTCGGTGGGTCCAAAGGAGACAGGAAGCCGCCACCAACAGGAAACCCAGTGTCACCATTAAGTCTTGGAAACAGTTCACCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 90 bp | GTCAATGTACAGGACGTGGGCCTTCCTCTGCAGCACATCCACGGCTaGTACTATGGCTCTGTTCCAGGTCTGATCAACTGTGTATTTGGC | + |
Preference number: 6 (lower is better) Translates to: VNVQDVGLPLQHIHG*YYGSVPGLINCVFG Trigger: GCCAAATACACAGTTGATCAGACCTGGAACAGAGCCATAGTACAAGCCGTGGATGTGCTGCAGAGGAAGGCCCACGTCCTGTACATTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 90 bp | TCAACGGCACAGGTGAGTACCTCCTCCTCTAAGATGTCCATGACCTaGACAGAGCAGAACTGCTCAAACAGAAGGGCCTTGACAGCTGCA | + |
Preference number: 6 (lower is better) Translates to: STAQVSTSSSKMSMT*TEQNCSNRRALTAA Trigger: TGCAGCTGTCAAGGCCCTTCTGTTTGAGCAGTTCTGCTCTGTCAAGGTCATGGACATCTTAGAGGAGGAGGTACTCACCTGTGCCGTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 72 bp | ATAGTCTTGTTAACTGGCAATTCCATTGTCTTCCACTaGTCTGCTGAAGGGCTGGCTTGCACCCTGTGGCTG | + |
Preference number: 6 (lower is better) Translates to: IVLLTGNSIVFH*SAEGLACTLWL Trigger: CAGCCACAGGGTGCAAGCCAGCCCTTCAGCAGAGCAGTGGAAGACAATGGAATTGCCAGTTAACAAGACTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 72 bp | TGGTTATGCTGTGCTACAGGACTTCTGAGAGGGTCCTaGGGCGGGGGCTTGCTTTCCTTCTTCTCAAAATTA | + |
Preference number: 6 (lower is better) Translates to: WLCCATGLLRGS*GGGLLSFFSKL Trigger: TAATTTTGAGAAGAAGGAAAGCAAGCCCCCGCCCCAGGACCCTCTCAGAAGTCCTGTAGCACAGCATAACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 72 bp | CATCCTCTGAGAACTGAGCACAGCACACGTCCCCAATaGTTGGATAAAAGTCAGAGCGTGGAATCACATGGC | + |
Preference number: 6 (lower is better) Translates to: HPLRTEHSTRPQ*LDKSQSVESHG Trigger: GCCATGTGATTCCACGCTCTGACTTTTATCCAACCATTGGGGACGTGTGCTGTGCTCAGTTCTCAGAGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 72 bp | CAGGTGAGTACCTCCTCCTCTAAGATGTCCATGACCTaGACAGAGCAGAACTGCTCAAACAGAAGGGCCTTG | + |
Preference number: 6 (lower is better) Translates to: QVSTSSSKMSMT*TEQNCSNRRAL Trigger: CAAGGCCCTTCTGTTTGAGCAGTTCTGCTCTGTCAAGGTCATGGACATCTTAGAGGAGGAGGTACTCACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 72 bp | GCACACGTCCCCAATGGTTGGATAAAAGTCAGAGCGTaGAATCACATGGCCACAGTATTCACTGAGGGATTC | + |
Preference number: 6 (lower is better) Translates to: AHVPNGWIKVRA*NHMATVFTEGF Trigger: GAATCCCTCAGTGAATACTGTGGCCATGTGATTCCACGCTCTGACTTTTATCCAACCATTGGGGACGTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 90 bp | GCAACCACGCCACAGAACTCATCACCCACATTCAAAGTCAGCACTTaGGGGATCAGGGCATTTCTGTCTGTCACAATCTTGCTCTCAACT | + |
Preference number: 6 (lower is better) Translates to: ATTPQNSSPTFKVST*GIRAFLSVTILLST Trigger: AGTTGAGAGCAAGATTGTGACAGACAGAAATGCCCTGATCCCCAAAGTGCTGACTTTGAATGTGGGTGATGAGTTCTGTGGCGTGGTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 90 bp | GATTTCCACAACTCTGGCTTGGAGTTTGAGCCCCACAACACATGCTaGAAATCTTGCTGTGGCCTCTTTTGTCCAATGCTTGTTTGGGGG | + |
Preference number: 6 (lower is better) Translates to: DFHNSGLEFEPHNTC*KSCCGLFCPMLVWG Trigger: CCCCCAAACAAGCATTGGACAAAAGAGGCCACAGCAAGATTTCAAGCATGTGTTGTGGGGCTCAAACTCCAAGCCAGAGTTGTGGAAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS TCA 72 bp | GGGGGCTGTATATCTACTAGCCAGCACTGCATCCCCTaGAATGGAAGTAGTAAGAACTGTGGTAATATCGCC | + |
Preference number: 6 (lower is better) Translates to: GGCISTSQHCIP*NGSSKNCGNIA Trigger: GGCGATATTACCACAGTTCTTACTACTTCCATTTCAGGGGATGCAGTGCTGGCTAGTAGATATACAGCCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 72 bp | CTTTGGGGATCAGGGCATTTCTGTCTGTCACAATCTTaGTCTCAACTGTCACTCTTCCAACGTCCTCCAATG | + |
Preference number: 6 (lower is better) Translates to: LWGSGHFCLSQS*SQLSLFQRPPM Trigger: CATTGGAGGACGTTGGAAGAGTGACAGTTGAGAGCAAGATTGTGACAGACAGAAATGCCCTGATCCCCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 72 bp | TTGGAGTTTGAGCCCCACAACACATGCTTGAAATCTTaGTGTGGCCTCTTTTGTCCAATGCTTGTTTGGGGG | + |
Preference number: 6 (lower is better) Translates to: LEFEPHNTCLKS*CGLFCPMLVWG Trigger: CCCCCAAACAAGCATTGGACAAAAGAGGCCACAGCAAGATTTCAAGCATGTGTTGTGGGGCTCAAACTCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 72 bp | CACAACTCTGGCTTGGAGTTTGAGCCCCACAACACATaGTTGAAATCTTGCTGTGGCCTCTTTTGTCCAATG | + |
Preference number: 6 (lower is better) Translates to: HNSGLEFEPHNT*LKSCCGLFCPM Trigger: CATTGGACAAAAGAGGCCACAGCAAGATTTCAAGCATGTGTTGTGGGGCTCAAACTCCAAGCCAGAGTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 72 bp | GAAATCTTGCTGTGGCCTCTTTTGTCCAATGCTTGTTaGGGGGCTGTATATCTACTAGCCAGCACTGCATCC | + |
Preference number: 6 (lower is better) Translates to: EILLWPLLSNAC*GAVYLLASTAS Trigger: GGATGCAGTGCTGGCTAGTAGATATACAGCCCCCAAACAAGCATTGGACAAAAGAGGCCACAGCAAGATTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 72 bp | GATGGCTTCACGCCTGCCAGCACACAATTTAGAGCTTaGATCGGCAAATCCAACAACTTTGGAATTATGGGA | + |
Preference number: 6 (lower is better) Translates to: DGFTPASTQFRA*IGKSNNFGIMG Trigger: TCCCATAATTCCAAAGTTGTTGGATTTGCCGATGCAAGCTCTAAATTGTGTGCTGGCAGGCGTGAAGCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 72 bp | CACAGAACTCATCACCCACATTCAAAGTCAGCACTTTaGGGATCAGGGCATTTCTGTCTGTCACAATCTTGC | + |
Preference number: 6 (lower is better) Translates to: HRTHHPHSKSAL*GSGHFCLSQSC Trigger: GCAAGATTGTGACAGACAGAAATGCCCTGATCCCCAAAGTGCTGACTTTGAATGTGGGTGATGAGTTCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 72 bp | ACTTTGGGGATCAGGGCATTTCTGTCTGTCACAATCTaGCTCTCAACTGTCACTCTTCCAACGTCCTCCAAT | + |
Preference number: 6 (lower is better) Translates to: TLGIRAFLSVTI*LSTVTLPTSSN Trigger: ATTGGAGGACGTTGGAAGAGTGACAGTTGAGAGCAAGATTGTGACAGACAGAAATGCCCTGATCCCCAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 72 bp | CCACAGAACTCATCACCCACATTCAAAGTCAGCACTTaGGGGATCAGGGCATTTCTGTCTGTCACAATCTTG | + |
Preference number: 6 (lower is better) Translates to: PQNSSPTFKVST*GIRAFLSVTIL Trigger: CAAGATTGTGACAGACAGAAATGCCCTGATCCCCAAAGTGCTGACTTTGAATGTGGGTGATGAGTTCTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 72 bp | AACTCTGGCTTGGAGTTTGAGCCCCACAACACATGCTaGAAATCTTGCTGTGGCCTCTTTTGTCCAATGCTT | + |
Preference number: 6 (lower is better) Translates to: NSGLEFEPHNTC*KSCCGLFCPML Trigger: AAGCATTGGACAAAAGAGGCCACAGCAAGATTTCAAGCATGTGTTGTGGGGCTCAAACTCCAAGCCAGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 72 bp | TTCTTTGAAATGGCTTTCACAGAGAGAACCACACTCTaGTTCAGCATGGCATTTCTCAGCAGCTCCATCACT | + |
Preference number: 6 (lower is better) Translates to: FFEMAFTERTTL*FSMAFLSSSIT Trigger: AGTGATGGAGCTGCTGAGAAATGCCATGCTGAACCAGAGTGTGGTTCTCTCTGTGAAAGCCATTTCAAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 90 bp | AACAAGGCTGGGCTTATGATCTCTAGTACATTTGCTGCTATAGTCTaGTTAACTGGCAATTCCATTGTCTTCCACTGCTCTGCTGAAGGG | + |
Preference number: 6 (lower is better) Translates to: NKAGLMISSTFAAIV*LTGNSIVFHCSAEG Trigger: CCCTTCAGCAGAGCAGTGGAAGACAATGGAATTGCCAGTTAACAAGACTATAGCAGCAAATGTACTAGAGATCATAAGCCCAGCCTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS TCA 72 bp | ACAGCAGGGTTTGAAGAGACCACCGAACTGTCCTCCTaGCTAGCTAAATACTGTTTGTTTTGTTCACAAAGC | + |
Preference number: 6 (lower is better) Translates to: TAGFEETTELSS*LAKYCLFCSQS Trigger: GCTTTGTGAACAAAACAAACAGTATTTAGCTAGTCAGGAGGACAGTTCGGTGGTCTCTTCAAACCCTGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 72 bp | CCACAACACATGCTTGAAATCTTGCTGTGGCCTCTTTaGTCCAATGCTTGTTTGGGGGCTGTATATCTACTA | + |
Preference number: 6 (lower is better) Translates to: PQHMLEILLWPL*SNACLGAVYLL Trigger: TAGTAGATATACAGCCCCCAAACAAGCATTGGACAAAAGAGGCCACAGCAAGATTTCAAGCATGTGTTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 90 bp | CTTGAATTCAGTAACTGTACCCTTTATCTCCATGGTTTTCTTGAGTaGGAGACTTCTCAAATCAGAGAACATTACTCTCTCAGCACCCGC | + |
Preference number: 6 (lower is better) Translates to: LEFSNCTLYLHGFLE*ETSQIREHYSLSTR Trigger: GCGGGTGCTGAGAGAGTAATGTTCTCTGATTTGAGAAGTCTCCAACTCAAGAAAACCATGGAGATAAAGGGTACAGTTACTGAATTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CCA 72 bp | TCAGGAGTCACATTACTGCTGGGCTTAGTTTTTACTTaGTTAGGAGGTGAACTGTTTCCAAGACTTAATGGT | + |
Preference number: 6 (lower is better) Translates to: SGVTLLLGLVFT*LGGELFPRLNG Trigger: ACCATTAAGTCTTGGAAACAGTTCACCTCCTAACCAAGTAAAAACTAAGCCCAGCAGTAATGTGACTCCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 72 bp | GGGCTTATGATCTCTAGTACATTTGCTGCTATAGTCTaGTTAACTGGCAATTCCATTGTCTTCCACTGCTCT | + |
Preference number: 6 (lower is better) Translates to: GLMISSTFAAIV*LTGNSIVFHCS Trigger: AGAGCAGTGGAAGACAATGGAATTGCCAGTTAACAAGACTATAGCAGCAAATGTACTAGAGATCATAAGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS GCA 72 bp | CTTAACAGGAAGATAACCATCTTCAGGCACCACATTTaGATATGTCTCTTTCAAGCTTGTAGAGAGTTGGTT | + |
Preference number: 6 (lower is better) Translates to: LNRKITIFRHHI*ICLFQACRELV Trigger: AACCAACTCTCTACAAGCTTGAAAGAGACATATGCAAATGTGGTGCCTGAAGATGGTTATCTTCCTGTTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 72 bp | GGGGACAGTCAACCTCACTCTTCACTTCAATGGCCTTaGTTTCAAATGGTGATTTATTATCTTCAAGCTTGT | + |
Preference number: 6 (lower is better) Translates to: GDSQPHSSLQWP*FQMVIYYLQAC Trigger: ACAAGCTTGAAGATAATAAATCACCATTTGAAACAAAGGCCATTGAAGTGAAGAGTGAGGTTGACTGTCCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |
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CDS CAA 72 bp | AGTAACTGTACCCTTTATCTCCATGGTTTTCTTGAGTaGGAGACTTCTCAAATCAGAGAACATTACTCTCTC | + |
Preference number: 6 (lower is better) Translates to: SNCTLYLHGFLE*ETSQIREHYSL Trigger: GAGAGAGTAATGTTCTCTGATTTGAGAAGTCTCCAACTCAAGAAAACCATGGAGATAAAGGGTACAGTTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000078723.11 ENSMUST00000111604.2 ENSMUST00000111606.8 ENSMUST00000121249.8 |