Pregenerated sensors for TDPOZ8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096879Ensembl transcript IDs: ENSMUST00000179064.2, ENSMUST00000194595.2, ENSMUST00000195847.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CTGAGCCCCTGGTCATCTTTTCTGTTAGCCCAATGCAGACACATTTCTCTGAAGCCTGGGCCACCATGCTaGCCTCCCCCAAATTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: LSPWSSFLLAQCRHISLKPGPPC*PPPNSV Trigger: CACTGAATTTGGGGGAGGGCAGCATGGTGGCCCAGG...CTTCAGAGAAATGTGTCTGCATTGGGCTAACAGAAAAGATGACCAGGGGCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| 3UTR-3UTR GCA 90 bp | AGACTGTTCCAGATTCCAATGCTGTCCATTTTCCCAACCACCATTCCAACATATCCTGGGCCACCATGCTaGCCTCCCCCAAATTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: RLFQIPMLSIFPTTIPTYPGPPC*PPPNSV Trigger: CACTGAATTTGGGGGAGGGCAGCATGGTGGCCCAGG...ATATGTTGGAATGGTGGTTGGGAAAATGGACAGCATTGGAATCTGGAACAGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| 3UTR-3UTR CCA 90 bp | GATTTTATTCCTCTCTCAATCCATCCCCATACCACTTCCCACACTTCCTCCCTGAACTATTGCAAATCCTaGGCCACCATGCTGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: DFIPLSIHPHTTSHTSSLNYCKS*ATMLPS Trigger: GGAGGGCAGCATGGTGGCCCAGGATTTGCAATAGTT...CAGGGAGGAAGTGTGGGAAGTGGTATGGGGATGGATTGAGAGAGGAATAAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194595.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTTGGTCTGTGCTTCAGGCCAATACCTAAGTTCAATCCCAGATTCCAAGACAACTATTGCAAATCCTaGGCCACCATGCTGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: PFGLCFRPIPKFNPRFQDNYCKS*ATMLPS Trigger: GGAGGGCAGCATGGTGGCCCAGGATTTGCAATAGTT...GTCTTGGAATCTGGGATTGAACTTAGGTATTGGCCTGAAGCACAGACCAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| 3UTR CAA 90 bp | ATGCTGTCCATTTTCCCAACCACCATTCCAACATATTTAGAACTATaGCAAATCCTGGGCCACCATGCTGCCCTCCCCCAAATTCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: MLSIFPTTIPTYLEL*QILGHHAALPQIQC Trigger: ACACTGAATTTGGGGGAGGGCAGCATGGTGGCCCAGGATTTGCAATAGTTCTAAATATGTTGGAATGGTGGTTGGGAAAATGGACAGCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| 3UTR CAA 90 bp | ATGCTGCCCTCCCCCAAATTCAGTGTAAATGTTCCAGCAATACCATaGTCTAAGGAGGAGTCACTGGGAAGAATATTTCCCAGTTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: MLPSPKFSVNVPAIP*SKEESLGRIFPSCC Trigger: ACAGCAACTGGGAAATATTCTTCCCAGTGACTCCTCCTTAGACAATGGTATTGCTGGAACATTTACACTGAATTTGGGGGAGGGCAGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| 3UTR-3UTR GCA 90 bp | AAACATGACAGTGTCCAAGCTGACATGATGTTGGAGGAGGAACTGAGCACCTTGTGTTCCAGATTCCAATaGTGTCCATTTTCCCAACCA | + |
|
Preference number: 2 (lower is better) Translates to: KHDSVQADMMLEEELSTLCSRFQ*CPFSQP Trigger: TGGTTGGGAAAATGGACAGCATTGGAATCTGGAACA...CAAGGTGCTCAGTTCCTCCTCCAACATCATGTCAGCTTGGACACTGTCATGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194595.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTTTGGTCTGTGCTTCAGGCCAATACCTAAGTTCAATCCCAGATTCCAAGACTGTTCCAGATTCCAATaGTGTCCATTTTCCCAACCA | + |
|
Preference number: 2 (lower is better) Translates to: PFGLCFRPIPKFNPRFQDCSRFQ*CPFSQP Trigger: TGGTTGGGAAAATGGACAGCATTGGAATCTGGAACA...GTCTTGGAATCTGGGATTGAACTTAGGTATTGGCCTGAAGCACAGACCAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| 3UTR CAA 90 bp | TTTTCTGTTAGCCCAATGCAGACACATTTCTCTGAAGAAACCCTTTaGGTCTGTGCTTCAGGCCAATACCTAAGTTCAATCCCAGATTCC | + |
|
Preference number: 2 (lower is better) Translates to: FSVSPMQTHFSEETL*VCASGQYLSSIPDS Trigger: GGAATCTGGGATTGAACTTAGGTATTGGCCTGAAGCACAGACCAAAAGGGTTTCTTCAGAGAAATGTGTCTGCATTGGGCTAACAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| 3UTR-3UTR GCA 90 bp | GGTAGACTGTTCCAGATTCCAATGCTGTCCATTTTCCCAACCACCATTCCAACAAGAATATTTCCCAGTTaGTGTTGGAAGACAGGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: GRLFQIPMLSIFPTTIPTRIFPS*CWKTGV Trigger: TACACCTGTCTTCCAACAGCAACTGGGAAATATTCT...TGTTGGAATGGTGGTTGGGAAAATGGACAGCATTGGAATCTGGAACAGTCTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| 3UTR-3UTR GCA 90 bp | CCAATACCTAAGTTCAATCCCAGATTCCAAGACATCAGACAAAAATTAAATGAGAATCCTGGGCCACCATaGTGCCCTCCCCCAAATTCA | + |
|
Preference number: 2 (lower is better) Translates to: PIPKFNPRFQDIRQKLNENPGPP*CPPPNS Trigger: TGAATTTGGGGGAGGGCAGCATGGTGGCCCAGGATT...CTCATTTAATTTTTGTCTGATGTCTTGGAATCTGGGATTGAACTTAGGTATTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| 3UTR-3UTR CCA 90 bp | GTTAGCCCAATGCAGACACATTTCTCTGAAGAAACCCTTTTGGTCTGTGCTTCACTAAGGAGGAGTCACTaGGAAGAATATTTCCCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: VSPMQTHFSEETLLVCASLRRSH*EEYFPV Trigger: AACTGGGAAATATTCTTCCCAGTGACTCCTCCTTAG...TGAAGCACAGACCAAAAGGGTTTCTTCAGAGAAATGTGTCTGCATTGGGCTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| 3UTR-3UTR GCA 90 bp | CCAACCACCATTCCAACATATTTAGAACTATTGCAAATCCTGGGCCACCATGCTAGAATATTTCCCAGTTaGTGTTGGAAGACAGGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: PTTIPTYLELLQILGHHARIFPS*CWKTGV Trigger: TACACCTGTCTTCCAACAGCAACTGGGAAATATTCT...AGCATGGTGGCCCAGGATTTGCAATAGTTCTAAATATGTTGGAATGGTGGTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTTTTCTGTTAGCCCAATGCAGACACATTTCTCTGAAGAAACCCTTTTGGTCCTAAGGAGGAGTCACTaGGAAGAATATTTCCCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: IFSVSPMQTHFSEETLLVLRRSH*EEYFPV Trigger: AACTGGGAAATATTCTTCCCAGTGACTCCTCCTTAG...GACCAAAAGGGTTTCTTCAGAGAAATGTGTCTGCATTGGGCTAACAGAAAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| 3UTR-3UTR CAA 90 bp | CTTTGCTCTGAGCCCCTGGTCATCTTTTCTGTTAGCCCAATGCAGACACATTTCGTTCCAGCAATACCATaGTCTAAGGAGGAGTCACTG | + |
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Preference number: 3 (lower is better) Translates to: LCSEPLVIFSVSPMQTHFVPAIP*SKEESL Trigger: CAGTGACTCCTCCTTAGACAATGGTATTGCTGGAAC...GAAATGTGTCTGCATTGGGCTAACAGAAAAGATGACCAGGGGCTCAGAGCAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| 3UTR TCA 72 bp | AAGGCAGTCAGGAAGAAACTGACACTGGCTAGAGCTTaGCCACATATATTACCTCAAAGCCATGCCTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: KAVRKKLTLARA*PHILPQSHAST Trigger: TGTGGAGGCATGGCTTTGAGGTAATATATGTGGTCAAGCTCTAGCCAGTGTCAGTTTCTTCCTGACTGCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194595.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGAAACCCTTTTGGTCTGTGCTTCAGGCCAATACCTAAGTTCAATCCCAGATGTTCCAGCAATACCATaGTCTAAGGAGGAGTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: EETLLVCASGQYLSSIPDVPAIP*SKEESL Trigger: CAGTGACTCCTCCTTAGACAATGGTATTGCTGGAAC...ATCTGGGATTGAACTTAGGTATTGGCCTGAAGCACAGACCAAAAGGGTTTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| 3UTR-3UTR CAA 90 bp | CTGCCCTCCCCCAAATTCAGTGTAAATGTTCCAGCAATACCATTGTCTAAGGAGAAGAATATTTCCCAGTaGCTGTTGGAAGACAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LPSPKFSVNVPAIPLSKEKNISQ*LLEDRC Trigger: ACACCTGTCTTCCAACAGCAACTGGGAAATATTCTT...CTCCTTAGACAATGGTATTGCTGGAACATTTACACTGAATTTGGGGGAGGGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| 3UTR TCA 72 bp | GACCACATATATTACCTCAAAGCCATGCCTCCACAGTaGGGACAAACTTCCTATAACAAGAGCACACTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: DHIYYLKAMPPQ*GQTSYNKSTLP Trigger: AGGAAGTGTGCTCTTGTTATAGGAAGTTTGTCCTCACTGTGGAGGCATGGCTTTGAGGTAATATATGTGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194595.2 |
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| 3UTR CCA 72 bp | ATGTTCCAGCAATACCATTGTCTAAGGAGGAGTCACTaGGAAGAATATTTCCCAGTTGCTGTTGGAAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: MFQQYHCLRRSH*EEYFPVAVGRQ Trigger: CTGTCTTCCAACAGCAACTGGGAAATATTCTTCCCAGTGACTCCTCCTTAGACAATGGTATTGCTGGAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
||
| 3UTR CCA 72 bp | CAAACTTCCTATAACAAGAGCACACTTCCTCCAACATaGCCACAGTTCCTAGTAGTGTCAATTTTCATGGGC | + |
|
Preference number: 3 (lower is better) Translates to: QTSYNKSTLPPT*PQFLVVSIFMG Trigger: GCCCATGAAAATTGACACTACTAGGAACTGTGGCCATGTTGGAGGAAGTGTGCTCTTGTTATAGGAAGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194595.2 |
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| 3UTR GCA 72 bp | CAGAATAGATGTCAGGTAGACTGTTCCAGATTCCAATaGTGTCCATTTTCCCAACCACCATTCCAACATATT | + |
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Preference number: 3 (lower is better) Translates to: QNRCQVDCSRFQ*CPFSQPPFQHI Trigger: AATATGTTGGAATGGTGGTTGGGAAAATGGACAGCATTGGAATCTGGAACAGTCTACCTGACATCTATTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| 3UTR-3UTR CAA 90 bp | GTTCCAGATTCCAATGCTGTCCATTTTCCCAACCACCATTCCAACATATTTAGAAAGAATATTTCCCAGTaGCTGTTGGAAGACAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: VPDSNAVHFPNHHSNIFRKNISQ*LLEDRC Trigger: ACACCTGTCTTCCAACAGCAACTGGGAAATATTCTT...TCTAAATATGTTGGAATGGTGGTTGGGAAAATGGACAGCATTGGAATCTGGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR GCA 90 bp | TCCAACATATTTAGAACTATTGCAAATCCTGGGCCACCATGCTGCCCTCCCCCAAGCCAGAGAGTGGAATaGTTGAGCCACCAAGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SNIFRTIANPGPPCCPPPSQRVE*LSHQVG Trigger: CCCCACTTGGTGGCTCAAGCATTCCACTCTCTGGCT...TGGGGGAGGGCAGCATGGTGGCCCAGGATTTGCAATAGTTCTAAATATGTTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR GCA 90 bp | CCTTTTGGTCTGTGCTTCAGGCCAATACCTAAGTTCAATCCCAGATTCCAAGACACACCTGTCAGCAGCTaGCAGCACATCACTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: PFGLCFRPIPKFNPRFQDTPVSS*QHITGH Trigger: ATGGCCAGTGATGTGCTGGCAGCTGCTGACAGGTGT...GTCTTGGAATCTGGGATTGAACTTAGGTATTGGCCTGAAGCACAGACCAAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR TCA 90 bp | CCAATGCAGACACATTTCTCTGAAGAAACCCTTTTGGTCTGTGCTTCAGGCCAAGTAGCTGTGGAGGTGTaGTGCCTTCCCAGTGTAGAT | + |
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Preference number: 4 (lower is better) Translates to: PMQTHFSEETLLVCASGQVAVEV*CLPSVD Trigger: ATCTACACTGGGAAGGCATCACACCTCCACAGCTAC...TTGGCCTGAAGCACAGACCAAAAGGGTTTCTTCAGAGAAATGTGTCTGCATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR TCA 90 bp | TTGTCTAAGGAGGAGTCACTGGGAAGAATATTTCCCAGTTGCTGTTGGAAGACAGGGCATCCTCACACATaGCCTTCAAGCCCTTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: LSKEESLGRIFPSCCWKTGHPHT*PSSPSV Trigger: GACTGAAGGGCTTGAAGGTCATGTGTGAGGATGCCC...TGTCTTCCAACAGCAACTGGGAAATATTCTTCCCAGTGACTCCTCCTTAGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR GCA 90 bp | ATACCATTGTCTAAGGAGGAGTCACTGGGAAGAATATTTCCCAGTTGCTGTTGGACACCTGTCAGCAGCTaGCAGCACATCACTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: IPLSKEESLGRIFPSCCWTPVSS*QHITGH Trigger: ATGGCCAGTGATGTGCTGGCAGCTGCTGACAGGTGT...CCAACAGCAACTGGGAAATATTCTTCCCAGTGACTCCTCCTTAGACAATGGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR GCA 90 bp | CAATGCAGACACATTTCTCTGAAGAAACCCTTTTGGTCTGTGCTTCAGGCCAATCCACAGAGAGGTTCCTaGAGAGGGCATCCTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: QCRHISLKKPFWSVLQANPQRGS*RGHPHT Trigger: TGTGTGAGGATGCCCTCTGCAGGAACCTCTCTGTGG...ATTGGCCTGAAGCACAGACCAAAAGGGTTTCTTCAGAGAAATGTGTCTGCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR GCA 90 bp | ATGCTGCCCTCCCCCAAATTCAGTGTAAATGTTCCAGCAATACCATTGTCTAAGAGCCAGAGAGTGGAATaGTTGAGCCACCAAGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MLPSPKFSVNVPAIPLSKSQRVE*LSHQVG Trigger: CCCCACTTGGTGGCTCAAGCATTCCACTCTCTGGCT...CTTAGACAATGGTATTGCTGGAACATTTACACTGAATTTGGGGGAGGGCAGCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR CCA 90 bp | TGGGCCACCATGCTGCCCTCCCCCAAATTCAGTGTAAATGTTCCAGCAATACCATCTGGTGTTAGCACTTaGGCTAGAGACAAGAAGGTA | + |
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Preference number: 4 (lower is better) Translates to: WATMLPSPKFSVNVPAIPSGVST*ARDKKV Trigger: TACCTTCTTGTCTCTAGCCCAAGTGCTAACACCAGA...TGGTATTGCTGGAACATTTACACTGAATTTGGGGGAGGGCAGCATGGTGGCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195847.2 |
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| CDS-3UTR TCA 90 bp | CAATGCAGACACATTTCTCTGAAGAAACCCTTTTGGTCTGTGCTTCAGGCCAATGGAGATCAGCCAGGATaGGAGTGTGTGCAGCATTCT | + |
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Preference number: 4 (lower is better) Translates to: QCRHISLKKPFWSVLQANGDQPG*ECVQHS Trigger: AGAATGCTGCACACACTCTCATCCTGGCTGATCTCC...ATTGGCCTGAAGCACAGACCAAAAGGGTTTCTTCAGAGAAATGTGTCTGCATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR GCA 90 bp | TGGGCCACCATGCTGCCCTCCCCCAAATTCAGTGTAAATGTTCCAGCAATACCATACGTCATCTTCCAATaGGCACCTTGTAACCTTGAT | + |
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Preference number: 4 (lower is better) Translates to: WATMLPSPKFSVNVPAIPYVIFQ*APCNLD Trigger: ATCAAGGTTACAAGGTGCGCATTGGAAGATGACGTA...TGGTATTGCTGGAACATTTACACTGAATTTGGGGGAGGGCAGCATGGTGGCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR GCA 90 bp | CCAATGCAGACACATTTCTCTGAAGAAACCCTTTTGGTCTGTGCTTCAGGCCAACAGGATGAGAGTGTGTaGAGCATTCTCCACAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: PMQTHFSEETLLVCASGQQDESV*SILHRE Trigger: CTCTCTGTGGAGAATGCTGCACACACTCTCATCCTG...TTGGCCTGAAGCACAGACCAAAAGGGTTTCTTCAGAGAAATGTGTCTGCATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR TCA 90 bp | TTGTCTAAGGAGGAGTCACTGGGAAGAATATTTCCCAGTTGCTGTTGGAAGACAAGCCCATCATCTCTTTaGAGACTTGGGGATCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LSKEESLGRIFPSCCWKTSPSSL*RLGDPG Trigger: ACCTGGATCCCCAAGTCTTCAAAGAGATGATGGGCT...TGTCTTCCAACAGCAACTGGGAAATATTCTTCCCAGTGACTCCTCCTTAGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR TCA 90 bp | CAATGCAGACACATTTCTCTGAAGAAACCCTTTTGGTCTGTGCTTCAGGCCAATAGCCCATCATCTCTTTaGAGACTTGGGGATCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: QCRHISLKKPFWSVLQANSPSSL*RLGDPG Trigger: ACCTGGATCCCCAAGTCTTCAAAGAGATGATGGGCT...ATTGGCCTGAAGCACAGACCAAAAGGGTTTCTTCAGAGAAATGTGTCTGCATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR TCA 90 bp | GTTCCAGATTCCAATGCTGTCCATTTTCCCAACCACCATTCCAACATATTTAGAGGGCATCCTCACACATaGCCTTCAAGCCCTTCAGTC | + |
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Preference number: 4 (lower is better) Translates to: VPDSNAVHFPNHHSNIFRGHPHT*PSSPSV Trigger: GACTGAAGGGCTTGAAGGTCATGTGTGAGGATGCCC...TCTAAATATGTTGGAATGGTGGTTGGGAAAATGGACAGCATTGGAATCTGGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR GCA 90 bp | AGAAACCCTTTTGGTCTGTGCTTCAGGCCAATACCTAAGTTCAATCCCAGATTCCAGGATGAGAGTGTGTaGAGCATTCTCCACAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: RNPFGLCFRPIPKFNPRFQDESV*SILHRE Trigger: CTCTCTGTGGAGAATGCTGCACACACTCTCATCCTG...GAATCTGGGATTGAACTTAGGTATTGGCCTGAAGCACAGACCAAAAGGGTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR CCA 90 bp | AAACATGACAGTGTCCAAGCTGACATGATGTTGGAGGAGGAACTGAGCACCTTGCTTGATTGCAGGTCTTaGGTTCTGTCCAGAAATGCT | + |
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Preference number: 4 (lower is better) Translates to: KHDSVQADMMLEEELSTLLDCRS*VLSRNA Trigger: AGCATTTCTGGACAGAACCCAAGACCTGCAATCAAG...CAAGGTGCTCAGTTCCTCCTCCAACATCATGTCAGCTTGGACACTGTCATGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194595.2 |
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| CDS-3UTR CCA 90 bp | AGACTGTTCCAGATTCCAATGCTGTCCATTTTCCCAACCACCATTCCAACATATCATGGCTCTGAAAACTaGAGAGCGAGCTGCCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: RLFQIPMLSIFPTTIPTYHGSEN*RASCQD Trigger: ATCCTGGCAGCTCGCTCTCCAGTTTTCAGAGCCATG...ATATGTTGGAATGGTGGTTGGGAAAATGGACAGCATTGGAATCTGGAACAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| 3UTR CAA 72 bp | ATTTTCCCAACCACCATTCCAACATATTTAGAACTATaGCAAATCCTGGGCCACCATGCTGCCCTCCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IFPTTIPTYLEL*QILGHHAALPQ Trigger: TTGGGGGAGGGCAGCATGGTGGCCCAGGATTTGCAATAGTTCTAAATATGTTGGAATGGTGGTTGGGAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR GCA 90 bp | ACCACCATTCCAACATATTTAGAACTATTGCAAATCCTGGGCCACCATGCTGCCCCAAGGGCCTGGTACTaGAGTATTCTAGAAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TTIPTYLELLQILGHHAAPRAWY*SILEKL Trigger: AAGCTTTTCTAGAATACTGCAGTACCAGGCCCTTGG...GGCAGCATGGTGGCCCAGGATTTGCAATAGTTCTAAATATGTTGGAATGGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195847.2 |
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| CDS-3UTR TCA 90 bp | TTTACTTTAAGCTCCAGATTTTATTCCTCTCTCAATCCATCCCCATACCACTTCGGAGATCAGCCAGGATaGGAGTGTGTGCAGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTLSSRFYSSLNPSPYHFGDQPG*ECVQHS Trigger: AGAATGCTGCACACACTCTCATCCTGGCTGATCTCC...GAAGTGGTATGGGGATGGATTGAGAGAGGAATAAAATCTGGAGCTTAAAGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194595.2 |
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| CDS-3UTR GCA 90 bp | CCTTTTGGTCTGTGCTTCAGGCCAATACCTAAGTTCAATCCCAGATTCCAAGACTACGTCATCTTCCAATaGGCACCTTGTAACCTTGAT | + |
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Preference number: 4 (lower is better) Translates to: PFGLCFRPIPKFNPRFQDYVIFQ*APCNLD Trigger: ATCAAGGTTACAAGGTGCGCATTGGAAGATGACGTA...GTCTTGGAATCTGGGATTGAACTTAGGTATTGGCCTGAAGCACAGACCAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR CCA 90 bp | GAAGAAACCCTTTTGGTCTGTGCTTCAGGCCAATACCTAAGTTCAATCCCAGATCTTGATTGCAGGTCTTaGGTTCTGTCCAGAAATGCT | + |
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Preference number: 4 (lower is better) Translates to: EETLLVCASGQYLSSIPDLDCRS*VLSRNA Trigger: AGCATTTCTGGACAGAACCCAAGACCTGCAATCAAG...ATCTGGGATTGAACTTAGGTATTGGCCTGAAGCACAGACCAAAAGGGTTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| 3UTR CAA 72 bp | AGCCCAATGCAGACACATTTCTCTGAAGAAACCCTTTaGGTCTGTGCTTCAGGCCAATACCTAAGTTCAATC | + |
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Preference number: 4 (lower is better) Translates to: SPMQTHFSEETL*VCASGQYLSSI Trigger: GATTGAACTTAGGTATTGGCCTGAAGCACAGACCAAAAGGGTTTCTTCAGAGAAATGTGTCTGCATTGGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR TCA 90 bp | ATTTCAGAGGTACAGTCTATTATCATCATCACAAGAAACATGACAGTGTCCAAGACAGGCAGCAGTCTGTaGAGAGGGAATTCTCCCACA | + |
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Preference number: 4 (lower is better) Translates to: ISEVQSIIIITRNMTVSKTGSSL*RGNSPT Trigger: TGTGGGAGAATTCCCTCTTCACAGACTGCTGCCTGT...CTTGGACACTGTCATGTTTCTTGTGATGATGATAATAGACTGTACCTCTGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194595.2 |
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| CDS-3UTR CCA 90 bp | CATTTCTCTGAAGAAACCCTTTTGGTCTGTGCTTCAGGCCAATACCTAAGTTCATCTGGTGTTAGCACTTaGGCTGTAGCACAATTTCTG | + |
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Preference number: 4 (lower is better) Translates to: HFSEETLLVCASGQYLSSSGVST*AVAQFL Trigger: CAGAAATTGTGCTACAGCCCAAGTGCTAACACCAGA...TGAACTTAGGTATTGGCCTGAAGCACAGACCAAAAGGGTTTCTTCAGAGAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194595.2 |
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| CDS-3UTR TCA 90 bp | CCAATACCTAAGTTCAATCCCAGATTCCAAGACATCAGACAAAAATTAAATGAGACAGGCAGCAGTCTGTaGAGAGGGAATTCTCCCACA | + |
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Preference number: 4 (lower is better) Translates to: PIPKFNPRFQDIRQKLNETGSSL*RGNSPT Trigger: TGTGGGAGAATTCCCTCTTCACAGACTGCTGCCTGT...CTCATTTAATTTTTGTCTGATGTCTTGGAATCTGGGATTGAACTTAGGTATTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR GCA 90 bp | TTAGCCCAATGCAGACACATTTCTCTGAAGAAACCCTTTTGGTCTGTGCTTCAGGGATCCTTTCTGTATTaGATTTTTCACCCTTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: LAQCRHISLKKPFWSVLQGSFLY*IFHPWH Trigger: ATGCCAAGGGTGAAAAATGCAATACAGAAAGGATCC...CTGAAGCACAGACCAAAAGGGTTTCTTCAGAGAAATGTGTCTGCATTGGGCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195847.2 |
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| CDS-3UTR CCA 90 bp | TTTACTTTAAGCTCCAGATTTTATTCCTCTCTCAATCCATCCCCATACCACTTCTGGGGATCCAGGTCATaGATCTCAACACGGTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: FTLSSRFYSSLNPSPYHFWGSRS*ISTRFV Trigger: AACAAACCGTGTTGAGATCCATGACCTGGATCCCCA...GAAGTGGTATGGGGATGGATTGAGAGAGGAATAAAATCTGGAGCTTAAAGTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000194595.2 |
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| CDS-3UTR CCA 90 bp | CAATGCAGACACATTTCTCTGAAGAAACCCTTTTGGTCTGTGCTTCAGGCCAATTGCATTTTTCACCCTTaGCATTTAAGATACAAACCT | + |
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Preference number: 4 (lower is better) Translates to: QCRHISLKKPFWSVLQANCIFHP*HLRYKP Trigger: AGGTTTGTATCTTAAATGCCAAGGGTGAAAAATGCA...ATTGGCCTGAAGCACAGACCAAAAGGGTTTCTTCAGAGAAATGTGTCTGCATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195847.2 |
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| CDS-3UTR CCA 90 bp | AGAAACCCTTTTGGTCTGTGCTTCAGGCCAATACCTAAGTTCAATCCCAGATTCTATTCTAGAAAAGCTTaGGATCCTTTCTGTATTGCA | + |
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Preference number: 4 (lower is better) Translates to: RNPFGLCFRPIPKFNPRFYSRKA*DPFCIA Trigger: TGCAATACAGAAAGGATCCCAAGCTTTTCTAGAATA...GAATCTGGGATTGAACTTAGGTATTGGCCTGAAGCACAGACCAAAAGGGTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195847.2 |
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| CDS TCA 90 bp | GGGCCTGAATCTTCAGATGCTCTATGCTGTGGAGATCAGCCAGGATaGGAGTGTGTGCAGCATTCTCCACAGAGAGGTTCCTGCAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: GPESSDALCCGDQPG*ECVQHSPQRGSCRG Trigger: CCCTCTGCAGGAACCTCTCTGTGGAGAATGCTGCACACACTCTCATCCTGGCTGATCTCCACAGCATAGAGCATCTGAAGATTCAGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179064.2 ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS GCA 90 bp | TGTGAAGAGGGAATTCTCCCACAGCTCCCCTACGTCATCTTCCAATaGGCACCTTGTAACCTTGATTGCAGGTCTTGGGTTCTGTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: CEEGILPQLPYVIFQ*APCNLDCRSWVLSR Trigger: TCTGGACAGAACCCAAGACCTGCAATCAAGGTTACAAGGTGCGCATTGGAAGATGACGTAGGGGAGCTGTGGGAGAATTCCCTCTTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179064.2 ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR CAA 90 bp | TGGGCCACCATGCTGCCCTCCCCCAAATTCAGTGTAAATGTTCCAGCAATACCAGATGTGACTCCCTCATaGACATCCACCCTGAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: WATMLPSPKFSVNVPAIPDVTPS*TSTLKS Trigger: AGACTTCAGGGTGGATGTCAATGAGGGAGTCACATC...TGGTATTGCTGGAACATTTACACTGAATTTGGGGGAGGGCAGCATGGTGGCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR CAA 90 bp | GATTTTATTCCTCTCTCAATCCATCCCCATACCACTTCCCACACTTCCTCCCTGCAGAGAGTGGAATGCTaGAGCCACCAAGTGGGGATG | + |
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Preference number: 5 (lower is better) Translates to: DFIPLSIHPHTTSHTSSLQRVEC*SHQVGM Trigger: CATCCCCACTTGGTGGCTCAAGCATTCCACTCTCTG...CAGGGAGGAAGTGTGGGAAGTGGTATGGGGATGGATTGAGAGAGGAATAAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000194595.2 |
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| CDS-3UTR CAA 90 bp | CCAGCAATACCATTGTCTAAGGAGGAGTCACTGGGAAGAATATTTCCCAGTTGCGATGTGACTCCCTCATaGACATCCACCCTGAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: PAIPLSKEESLGRIFPSCDVTPS*TSTLKS Trigger: AGACTTCAGGGTGGATGTCAATGAGGGAGTCACATC...GCAACTGGGAAATATTCTTCCCAGTGACTCCTCCTTAGACAATGGTATTGCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR CAA 90 bp | CAATGCAGACACATTTCTCTGAAGAAACCCTTTTGGTCTGTGCTTCAGGCCAATAAGCCCATCATCTCTTaGAAGACTTGGGGATCCAGG | + |
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Preference number: 5 (lower is better) Translates to: QCRHISLKKPFWSVLQANKPIIS*KTWGSR Trigger: CCTGGATCCCCAAGTCTTCAAAGAGATGATGGGCTT...ATTGGCCTGAAGCACAGACCAAAAGGGTTTCTTCAGAGAAATGTGTCTGCATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR CAA 90 bp | ATCTTTTCTGTTAGCCCAATGCAGACACATTTCTCTGAAGAAACCCTTTTGGTCAAGCCCATCATCTCTTaGAAGACTTGGGGATCCAGG | + |
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Preference number: 5 (lower is better) Translates to: IFSVSPMQTHFSEETLLVKPIIS*KTWGSR Trigger: CCTGGATCCCCAAGTCTTCAAAGAGATGATGGGCTT...GACCAAAAGGGTTTCTTCAGAGAAATGTGTCTGCATTGGGCTAACAGAAAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS-3UTR CAA 90 bp | CCAACCACCATTCCAACATATTTAGAACTATTGCAAATCCTGGGCCACCATGCTGGGATCCTTTCTGTATaGCATTTTTCACCCTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: PTTIPTYLELLQILGHHAGILSV*HFSPLA Trigger: TGCCAAGGGTGAAAAATGCAATACAGAAAGGATCCC...AGCATGGTGGCCCAGGATTTGCAATAGTTCTAAATATGTTGGAATGGTGGTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195847.2 |
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| CDS-3UTR CAA 90 bp | GTTAGCCCAATGCAGACACATTTCTCTGAAGAAACCCTTTTGGTCTGTGCTTCATTGCATTTTTCACCCTaGGCATTTAAGATACAAACC | + |
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Preference number: 5 (lower is better) Translates to: VSPMQTHFSEETLLVCASLHFSP*AFKIQT Trigger: GGTTTGTATCTTAAATGCCAAGGGTGAAAAATGCAA...TGAAGCACAGACCAAAAGGGTTTCTTCAGAGAAATGTGTCTGCATTGGGCTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195847.2 |
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| CDS GCA 90 bp | AAGGTATGTCGAATGATAAACTTTTCAAATCCAAGGGCCTGGTACTaGAGTATTCTAGAAAAGCTTGGGATCCTTTCTGTATTGCATTTT | + |
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Preference number: 5 (lower is better) Translates to: KVCRMINFSNPRAWY*SILEKLGILSVLHF Trigger: AAAATGCAATACAGAAAGGATCCCAAGCTTTTCTAGAATACTGCAGTACCAGGCCCTTGGATTTGAAAAGTTTATCATTCGACATACCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195847.2 |
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| CDS GCA 72 bp | GACCTTCAAGCCCTTCAGTCCACACCTGTCAGCAGCTaGCAGCACATCACTGGCCATAGAGTAGCTGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: DLQALQSTPVSS*QHITGHRVAVE Trigger: CTCCACAGCTACTCTATGGCCAGTGATGTGCTGGCAGCTGCTGACAGGTGTGGACTGAAGGGCTTGAAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179064.2 ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS TCA 72 bp | CTGAAAACTGGAGAGCGAGCTGCCAGGATGACCTTGTaGGCCCTGAATTCATGGCCAGCTACCAACAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LKTGERAARMTL*ALNSWPATNRQ Trigger: CTGCCTGTTGGTAGCTGGCCATGAATTCAGGGCTCACAAGGTCATCCTGGCAGCTCGCTCTCCAGTTTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179064.2 ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS TCA 72 bp | TCTTCAGATGCTCTATGCTGTGGAGATCAGCCAGGATaGGAGTGTGTGCAGCATTCTCCACAGAGAGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SSDALCCGDQPG*ECVQHSPQRGS Trigger: GGAACCTCTCTGTGGAGAATGCTGCACACACTCTCATCCTGGCTGATCTCCACAGCATAGAGCATCTGAAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179064.2 ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS GCA 72 bp | GGAATTCTCCCACAGCTCCCCTACGTCATCTTCCAATaGGCACCTTGTAACCTTGATTGCAGGTCTTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: GILPQLPYVIFQ*APCNLDCRSWV Trigger: AACCCAAGACCTGCAATCAAGGTTACAAGGTGCGCATTGGAAGATGACGTAGGGGAGCTGTGGGAGAATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179064.2 ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS TCA 72 bp | AAAATACGATGTGTAGAAGCCAGAGAGTGGAATGCTTaGGCCACCAAGTGGGGATGTGACTCCCTCATTGAC | + |
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Preference number: 6 (lower is better) Translates to: KIRCVEAREWNA*ATKWGCDSLID Trigger: GTCAATGAGGGAGTCACATCCCCACTTGGTGGCTCAAGCATTCCACTCTCTGGCTTCTACACATCGTATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000179064.2 ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS CCA 72 bp | TTCCAATGCGCACCTTGTAACCTTGATTGCAGGTCTTaGGTTCTGTCCAGAAATGCTGAAGGAGTCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: FQCAPCNLDCRS*VLSRNAEGVLE Trigger: CTCCAAGACTCCTTCAGCATTTCTGGACAGAACCCAAGACCTGCAATCAAGGTTACAAGGTGCGCATTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000179064.2 ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS CAA 72 bp | AGACTTGGGGATCCAGGTCATGGATCTCAACACGGTTaGTTAGTCTCACCTTCATTTCATGTTCAAACATGG | + |
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Preference number: 6 (lower is better) Translates to: RLGDPGHGSQHG*LVSPSFHVQTW Trigger: CCATGTTTGAACATGAAATGAAGGTGAGACTAACAAACCGTGTTGAGATCCATGACCTGGATCCCCAAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000179064.2 ENSMUST00000194595.2 ENSMUST00000195847.2 |
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| CDS TCA 72 bp | CCTCGAACTTTGCCCAAACTGAGCCCTTTTCACAGCTaGGCAAAATCAGATAAAGTGACACGTAATCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: PRTLPKLSPFHS*AKSDKVTRNLC Trigger: ACAAAGATTACGTGTCACTTTATCTGATTTTGCTCAGCTGTGAAAAGGGCTCAGTTTGGGCAAAGTTCGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195847.2 |
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| CDS GCA 72 bp | CGAATGATAAACTTTTCAAATCCAAGGGCCTGGTACTaGAGTATTCTAGAAAAGCTTGGGATCCTTTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: RMINFSNPRAWY*SILEKLGILSV Trigger: TACAGAAAGGATCCCAAGCTTTTCTAGAATACTGCAGTACCAGGCCCTTGGATTTGAAAAGTTTATCATTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195847.2 |
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| CDS CCA 72 bp | AGCTTGGGATCCTTTCTGTATTGCATTTTTCACCCTTaGCATTTAAGATACAAACCTCGAACTTTGCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: SLGSFLYCIFHP*HLRYKPRTLPK Trigger: TTTGGGCAAAGTTCGAGGTTTGTATCTTAAATGCCAAGGGTGAAAAATGCAATACAGAAAGGATCCCAAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195847.2 |
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| CDS CCA 72 bp | GTATGTCGAATGATAAACTTTTCAAATCCAAGGGCCTaGTACTGCAGTATTCTAGAAAAGCTTGGGATCCTT | + |
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Preference number: 6 (lower is better) Translates to: VCRMINFSNPRA*YCSILEKLGIL Trigger: AAGGATCCCAAGCTTTTCTAGAATACTGCAGTACCAGGCCCTTGGATTTGAAAAGTTTATCATTCGACATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195847.2 |
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| CDS CAA 72 bp | AAGCTTGGGATCCTTTCTGTATTGCATTTTTCACCCTaGGCATTTAAGATACAAACCTCGAACTTTGCCCAA | + |
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Preference number: 6 (lower is better) Translates to: KLGILSVLHFSP*AFKIQTSNFAQ Trigger: TTGGGCAAAGTTCGAGGTTTGTATCTTAAATGCCAAGGGTGAAAAATGCAATACAGAAAGGATCCCAAGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195847.2 |
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