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Pregenerated sensors for TDPOZ7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000095251

Ensembl transcript IDs: ENSMUST00000091692.4

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp AACAGGGAATTCTCCCACAGCTCTCCTAGGTCATCTGTCAACAGGTaGCTTGGATCCTTGATTGCAGGTGTTATGTTCTGTCCAGGCATG +
Preference number: 5 (lower is better)
Translates to: NREFSHSSPRSSVNR*LGSLIAGVMFCPGM
Trigger: CATGCCTGGACAGAACATAACACCTGCAATCAAGGATCCAAGGCACCTGTTGACAGATGACCTAGGAGAGCTGTGGGAGAATTCCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091692.4
CDS TCA 90 bp ACTTCCACTCTGAGGTCTCAGAGACCACAGAAGCATGAAGTGCAATaGAATACAGGGCCTGAGTCTTCAGCTGCTCTCTTTTGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: TSTLRSQRPQKHEVQ*NTGPESSAALFCGG
Trigger: ACCTCCACAAAAGAGAGCAGCTGAAGACTCAGGCCCTGTATTTCATTGCACTTCATGCTTCTGTGGTCTCTGAGACCTCAGAGTGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091692.4
CDS TCA 72 bp CTGAAAACTGGAGAGCGAGCTGCTAGGATGGCCTTGTaGGCCCTGAATTCATGGCCAGCTACCAACAGGCAG +
Preference number: 6 (lower is better)
Translates to: LKTGERAARMAL*ALNSWPATNRQ
Trigger: CTGCCTGTTGGTAGCTGGCCATGAATTCAGGGCTCACAAGGCCATCCTAGCAGCTCGCTCTCCAGTTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091692.4
CDS CCA 72 bp CAGCACATCAGTGGCCATGGAGTGGCTTTGGAGGTGTaGCGCCTTCCCAGTGTAAATGAAGCCCATCATCTC +
Preference number: 6 (lower is better)
Translates to: QHISGHGVALEV*RLPSVNEAHHL
Trigger: GAGATGATGGGCTTCATTTACACTGGGAAGGCGCCACACCTCCAAAGCCACTCCATGGCCACTGATGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091692.4
CDS TCA 72 bp AGACAGATCCTACTATGCTCACCTTGCAGCAGAGGGTaGGCTTGTTTTCAGGGAGAAACCGACGTGGATGAG +
Preference number: 6 (lower is better)
Translates to: RQILLCSPCSRG*ACFQGETDVDE
Trigger: CTCATCCACGTCGGTTTCTCCCTGAAAACAAGCTCACCCTCTGCTGCAAGGTGAGCATAGTAGGATCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091692.4
CDS TCA 72 bp CTCCTAGGTCATCTGTCAACAGGTGCCTTGGATCCTTaGTTGCAGGTGTTATGTTCTGTCCAGGCATGCCAA +
Preference number: 6 (lower is better)
Translates to: LLGHLSTGALDP*LQVLCSVQACQ
Trigger: TTGGCATGCCTGGACAGAACATAACACCTGCAATCAAGGATCCAAGGCACCTGTTGACAGATGACCTAGGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091692.4
CDS CCA 72 bp GGAAGTTGTGATCCAGAACTCGTACTTTGCCCAAACTaGGCTCTTTCGACAGCTGAGCAACTCCAGGAAAAC +
Preference number: 6 (lower is better)
Translates to: GSCDPELVLCPN*ALSTAEQLQEN
Trigger: GTTTTCCTGGAGTTGCTCAGCTGTCGAAAGAGCCCAGTTTGGGCAAAGTACGAGTTCTGGATCACAACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091692.4
CDS TCA 72 bp ACTCGTACTTTGCCCAAACTGGGCTCTTTCGACAGCTaGGCAACTCCAGGAAAACTGACATGTAACATTCGC +
Preference number: 6 (lower is better)
Translates to: TRTLPKLGSFDS*ATPGKLTCNIR
Trigger: GCGAATGTTACATGTCAGTTTTCCTGGAGTTGCTCAGCTGTCGAAAGAGCCCAGTTTGGGCAAAGTACGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091692.4
CDS TCA 72 bp CTGAGGTCTCAGAGACCACAGAAGCATGAAGTGCAATaGAATACAGGGCCTGAGTCTTCAGCTGCTCTCTTT +
Preference number: 6 (lower is better)
Translates to: LRSQRPQKHEVQ*NTGPESSAALF
Trigger: AAAGAGAGCAGCTGAAGACTCAGGCCCTGTATTTCATTGCACTTCATGCTTCTGTGGTCTCTGAGACCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091692.4
CDS GCA 72 bp TTCTCCCACAGCTCTCCTAGGTCATCTGTCAACAGGTaGCTTGGATCCTTGATTGCAGGTGTTATGTTCTGT +
Preference number: 6 (lower is better)
Translates to: FSHSSPRSSVNR*LGSLIAGVMFC
Trigger: ACAGAACATAACACCTGCAATCAAGGATCCAAGGCACCTGTTGACAGATGACCTAGGAGAGCTGTGGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091692.4
CDS CCA 72 bp CCCATCATCTCCTTAAAGACTTTGGGATCCAGGTCATaGATCTCAGTGGGGTTTCCTAGTCTCTCCTCCATT +
Preference number: 6 (lower is better)
Translates to: PIISLKTLGSRS*ISVGFPSLSSI
Trigger: AATGGAGGAGAGACTAGGAAACCCCACTGAGATCCATGACCTGGATCCCAAAGTCTTTAAGGAGATGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091692.4
CDS TCA 72 bp AGGGTGAGCTTGTTTTCAGGGAGAAACCGACGTGGATaGGAGATGAGGAAATCTCCAAGGATGAACTTTTTG +
Preference number: 6 (lower is better)
Translates to: RVSLFSGRNRRG*EMRKSPRMNFL
Trigger: CAAAAAGTTCATCCTTGGAGATTTCCTCATCTCTCATCCACGTCGGTTTCTCCCTGAAAACAAGCTCACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091692.4