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Pregenerated sensors for TDPOZ4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000060256

Ensembl transcript IDs: ENSMUST00000075953.2

Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CTCACACATGACCATCAAGTCCTCCAGGCCATACCTGTCAGCAGCTaGCAGCAGATCACAGGCCATGGAGTGGCTGTGGAGGTGTGGCAC +
Preference number: 5 (lower is better)
Translates to: LTHDHQVLQAIPVSS*QQITGHGVAVEVWH
Trigger: GTGCCACACCTCCACAGCCACTCCATGGCCTGTGATCTGCTGGCAGCTGCTGACAGGTATGGCCTGGAGGACTTGATGGTCATGTGTGAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075953.2
CDS GCA 90 bp CTTCAGATGCTCTGTGCTGTGGAGGTCAGCCACGATGAGTGTGTGTaGAGCATTCTCCACAGAGAGGCTCCTGCACAGGGCATCCTCACA +
Preference number: 5 (lower is better)
Translates to: LQMLCAVEVSHDECV*SILHREAPAQGILT
Trigger: TGTGAGGATGCCCTGTGCAGGAGCCTCTCTGTGGAGAATGCTGCACACACACTCATCGTGGCTGACCTCCACAGCACAGAGCATCTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075953.2
CDS CCA 90 bp GACAAGAAGGAATCTCGAGTGATGAACTTTTCGAATCCAAAGGGCTaGTGTGGCTGTATTCTAGAAAAGCTTGGGATCCTTTCTGTATTG +
Preference number: 5 (lower is better)
Translates to: DKKESRVMNFSNPKG*CGCILEKLGILSVL
Trigger: CAATACAGAAAGGATCCCAAGCTTTTCTAGAATACAGCCACACCAGCCCTTTGGATTCGAAAAGTTCATCACTCGAGATTCCTTCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075953.2
CDS CCA 90 bp GAAGGAATCTCGAGTGATGAACTTTTCGAATCCAAAGGGCTGGTGTaGCTGTATTCTAGAAAAGCTTGGGATCCTTTCTGTATTGCATTT +
Preference number: 5 (lower is better)
Translates to: EGISSDELFESKGLV*LYSRKAWDPFCIAF
Trigger: AAATGCAATACAGAAAGGATCCCAAGCTTTTCTAGAATACAGCCACACCAGCCCTTTGGATTCGAAAAGTTCATCACTCGAGATTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075953.2
CDS GCA 72 bp GACCATCAAGTCCTCCAGGCCATACCTGTCAGCAGCTaGCAGCAGATCACAGGCCATGGAGTGGCTGTGGAG +
Preference number: 6 (lower is better)
Translates to: DHQVLQAIPVSS*QQITGHGVAVE
Trigger: CTCCACAGCCACTCCATGGCCTGTGATCTGCTGGCAGCTGCTGACAGGTATGGCCTGGAGGACTTGATGGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075953.2
CDS GCA 72 bp CTCTGTGCTGTGGAGGTCAGCCACGATGAGTGTGTGTaGAGCATTCTCCACAGAGAGGCTCCTGCACAGGGC +
Preference number: 6 (lower is better)
Translates to: LCAVEVSHDECV*SILHREAPAQG
Trigger: GCCCTGTGCAGGAGCCTCTCTGTGGAGAATGCTGCACACACACTCATCGTGGCTGACCTCCACAGCACAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075953.2
CDS TCA 72 bp CCACAGAGAGGCTCCTGCACAGGGCATCCTCACACATaGCCATCAAGTCCTCCAGGCCATACCTGTCAGCAG +
Preference number: 6 (lower is better)
Translates to: PQRGSCTGHPHT*PSSPPGHTCQQ
Trigger: CTGCTGACAGGTATGGCCTGGAGGACTTGATGGTCATGTGTGAGGATGCCCTGTGCAGGAGCCTCTCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075953.2
CDS TCA 72 bp CTGAAAACTGGAGAGCGAGCTGCCAGGATGGCCTTGTaGGCCCTGAATTCATGGCCAGCTACCAACAGGGAG +
Preference number: 6 (lower is better)
Translates to: LKTGERAARMAL*ALNSWPATNRE
Trigger: CTCCCTGTTGGTAGCTGGCCATGAATTCAGGGCTCACAAGGCCATCCTGGCAGCTCGCTCTCCAGTTTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075953.2
CDS TCA 72 bp AGGGCCCAGAAAACACGCTGTGCAGAAGCTAGAGAGTaGAATGCTTCAGCCACCAAGCGGGGATGTGACTCC +
Preference number: 6 (lower is better)
Translates to: RAQKTRCAEARE*NASATKRGCDS
Trigger: GGAGTCACATCCCCGCTTGGTGGCTGAAGCATTTCACTCTCTAGCTTCTGCACAGCGTGTTTTCTGGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075953.2
CDS CAA 72 bp CCCTGTGTAGATGAAGCCCATCATCTCCTTGAAGACTaGGGGATCCAGGTCATGGATCTCAACACAGTTTGT +
Preference number: 6 (lower is better)
Translates to: PCVDEAHHLLED*GIQVMDLNTVC
Trigger: ACAAACTGTGTTGAGATCCATGACCTGGATCCCCAAGTCTTCAAGGAGATGATGGGCTTCATCTACACAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075953.2
CDS CCA 72 bp TTCCAATGTGCACCTTGTAACCTTGATTGCAGGTCTTaGGTTCTGTCCAGAAATGCTGAAGGAGTCTTGGAG +
Preference number: 6 (lower is better)
Translates to: FQCAPCNLDCRS*VLSRNAEGVLE
Trigger: CTCCAAGACTCCTTCAGCATTTCTGGACAGAACCCAAGACCTGCAATCAAGGTTACAAGGTGCACATTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075953.2
CDS CCA 72 bp TCCAAAGGGCTGGTGTGGCTGTATTCTAGAAAAGCTTaGGATCCTTTCTGTATTGCATTTTTCACCCTTGGC +
Preference number: 6 (lower is better)
Translates to: SKGLVWLYSRKA*DPFCIAFFTLG
Trigger: GCCAAGGGTGAAAAATGCAATACAGAAAGGATCCCAAGCTTTTCTAGAATACAGCCACACCAGCCCTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000075953.2
CDS CCA 72 bp TCGAGTGATGAACTTTTCGAATCCAAAGGGCTGGTGTaGCTGTATTCTAGAAAAGCTTGGGATCCTTTCTGT +
Preference number: 6 (lower is better)
Translates to: SSDELFESKGLV*LYSRKAWDPFC
Trigger: ACAGAAAGGATCCCAAGCTTTTCTAGAATACAGCCACACCAGCCCTTTGGATTCGAAAAGTTCATCACTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075953.2
CDS CCA 72 bp GAATCTCGAGTGATGAACTTTTCGAATCCAAAGGGCTaGTGTGGCTGTATTCTAGAAAAGCTTGGGATCCTT +
Preference number: 6 (lower is better)
Translates to: ESRVMNFSNPKG*CGCILEKLGIL
Trigger: AAGGATCCCAAGCTTTTCTAGAATACAGCCACACCAGCCCTTTGGATTCGAAAAGTTCATCACTCGAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075953.2
CDS CAA 72 bp ACCCCGGTTGGGTATACTCTCAAACACCATGTCATTTaGTCATTGTCCTCTAATGAGAACACTAGGCTTGTA +
Preference number: 6 (lower is better)
Translates to: TPVGYTLKHHVI*SLSSNENTRLV
Trigger: TACAAGCCTAGTGTTCTCATTAGAGGACAATGACAAAATGACATGGTGTTTGAGAGTATACCCAACCGGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075953.2
CDS CAA 90 bp TCAACCCCGGTTGGGTATACTCTCAAACACCATGTCATTTTGTCATaGTCCTCTAATGAGAACACTAGGCTTGTAATATATTCCTCCGTT +
Preference number: 6 (lower is better)
Translates to: STPVGYTLKHHVILS*SSNENTRLVIYSSV
Trigger: AACGGAGGAATATATTACAAGCCTAGTGTTCTCATTAGAGGACAATGACAAAATGACATGGTGTTTGAGAGTATACCCAACCGGGGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075953.2
CDS CAA 90 bp TTTTCATCAACCCCGGTTGGGTATACTCTCAAACACCATGTCATTTaGTCATTGTCCTCTAATGAGAACACTAGGCTTGTAATATATTCC +
Preference number: 6 (lower is better)
Translates to: FSSTPVGYTLKHHVI*SLSSNENTRLVIYS
Trigger: GGAATATATTACAAGCCTAGTGTTCTCATTAGAGGACAATGACAAAATGACATGGTGTTTGAGAGTATACCCAACCGGGGTTGATGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075953.2