RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TDPOZ3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000058005

Ensembl transcript IDs: ENSMUST00000081780.4

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CTCACACAGGACCTTCAGGCCCACCAGGCCATACTTGTCAGCAGCTaGCAGCACATCACAGGCCATGGAGTGGCTGTGGAGGTGTGGTGC +
Preference number: 5 (lower is better)
Translates to: LTQDLQAHQAILVSS*QHITGHGVAVEVWC
Trigger: GCACCACACCTCCACAGCCACTCCATGGCCTGTGATGTGCTGCCAGCTGCTGACAAGTATGGCCTGGTGGGCCTGAAGGTCCTGTGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS GCA 90 bp CTTCAGCTTCTCTGTGCTGTTGAGGTCAGCCAGGATGAGAGTGTGTaGAGCAGTCTTCACAGAGAGGTTCCTGCAGAGGACATCCTCACA +
Preference number: 5 (lower is better)
Translates to: LQLLCAVEVSQDESV*SSLHREVPAEDILT
Trigger: TGTGAGGATGTCCTCTGCAGGAACCTCTCTGTGAAGACTGCTGCACACACTCTCATCCTGGCTGACCTCAACAGCACAGAGAAGCTGAAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS GCA 90 bp AAGAGGGAATTCTCCCATAGCTCCCCTAGATCATCTGTCAACATGTaGCTTGGGTCCTTGATTGCAGGTGTCCTCTTCTGTACAGGCATG +
Preference number: 5 (lower is better)
Translates to: KREFSHSSPRSSVNM*LGSLIAGVLFCTGM
Trigger: CATGCCTGTACAGAAGAGGACACCTGCAATCAAGGACCCAAGGCACATGTTGACAGATGATCTAGGGGAGCTATGGGAGAATTCCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS TCA 90 bp GCATGTCAAATACGGTTCCAACTATGCTCACCTTGCAGCATATGGTaGACTGGTCTTCAGGGAGAAACCAATTCATATGGGAAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: ACQIRFQLCSPCSIW*TGLQGETNSYGKGE
Trigger: TTCTCCTTTCCCATATGAATTGGTTTCTCCCTGAAGACCAGTTCACCATATGCTGCAAGGTGAGCATAGTTGGAACCGTATTTGACATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS CCA 90 bp TCAAATACGGTTCCAACTATGCTCACCTTGCAGCATATGGTGAACTaGTCTTCAGGGAGAAACCAATTCATATGGGAAAGGAGAAGACCT +
Preference number: 5 (lower is better)
Translates to: SNTVPTMLTLQHMVN*SSGRNQFIWERRRP
Trigger: AGGTCTTCTCCTTTCCCATATGAATTGGTTTCTCCCTGAAGACCAGTTCACCATATGCTGCAAGGTGAGCATAGTTGGAACCGTATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS CCA 72 bp GACCTTCAGGCCCACCAGGCCATACTTGTCAGCAGCTaGCAGCACATCACAGGCCATGGAGTGGCTGTGGAG +
Preference number: 6 (lower is better)
Translates to: DLQAHQAILVSS*QHITGHGVAVE
Trigger: CTCCACAGCCACTCCATGGCCTGTGATGTGCTGCCAGCTGCTGACAAGTATGGCCTGGTGGGCCTGAAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS TCA 72 bp CTGGAGAGCGAGCTGCTAGGATTGCCTTGTGAGCCTTaGATTCATGGCCAGCTACCAGCAGGCAGCAATCTG +
Preference number: 6 (lower is better)
Translates to: LESELLGLPCEP*IHGQLPAGSNL
Trigger: CAGATTGCTGCCTGCTGGTAGCTGGCCATGAATTCAAGGCTCACAAGGCAATCCTAGCAGCTCGCTCTCCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS GCA 72 bp CTCTGTGCTGTTGAGGTCAGCCAGGATGAGAGTGTGTaGAGCAGTCTTCACAGAGAGGTTCCTGCAGAGGAC +
Preference number: 6 (lower is better)
Translates to: LCAVEVSQDESV*SSLHREVPAED
Trigger: GTCCTCTGCAGGAACCTCTCTGTGAAGACTGCTGCACACACTCTCATCCTGGCTGACCTCAACAGCACAGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS CCA 72 bp GCCAGGGAGTGGAATGCTTCAGCCACCAAGTGGGGATaGGACTTCCACATTGACTTCCACTCTGAGGTCTCA +
Preference number: 6 (lower is better)
Translates to: AREWNASATKWG*DFHIDFHSEVS
Trigger: TGAGACCTCAGAGTGGAAGTCAATGTGGAAGTCCCATCCCCACTTGGTGGCTGAAGCATTCCACTCCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS TCA 72 bp CTGAAAACTGGAGAGCGAGCTGCTAGGATTGCCTTGTaGGCCTTGAATTCATGGCCAGCTACCAGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: LKTGERAARIAL*ALNSWPATSRQ
Trigger: CTGCCTGCTGGTAGCTGGCCATGAATTCAAGGCTCACAAGGCAATCCTAGCAGCTCGCTCTCCAGTTTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS CAA 72 bp ATGCTTCAGCCACCAAGTGGGGATGGGACTTCCACATaGACTTCCACTCTGAGGTCTCAGAAACCTCACAGG +
Preference number: 6 (lower is better)
Translates to: MLQPPSGDGTST*TSTLRSQKPHR
Trigger: CCTGTGAGGTTTCTGAGACCTCAGAGTGGAAGTCAATGTGGAAGTCCCATCCCCACTTGGTGGCTGAAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS GCA 72 bp CAAGAAAGAACACTTTGCAGAAGCCAGGGAGTGGAATaGTTCAGCCACCAAGTGGGGATGGGACTTCCACAT +
Preference number: 6 (lower is better)
Translates to: QERTLCRSQGVE*FSHQVGMGLPH
Trigger: ATGTGGAAGTCCCATCCCCACTTGGTGGCTGAAGCATTCCACTCCCTGGCTTCTGCAAAGTGTTCTTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS TCA 72 bp CCCCTAGATCATCTGTCAACATGTGCCTTGGGTCCTTaGTTGCAGGTGTCCTCTTCTGTACAGGCATGTCAA +
Preference number: 6 (lower is better)
Translates to: PLDHLSTCALGP*LQVSSSVQACQ
Trigger: TTGACATGCCTGTACAGAAGAGGACACCTGCAATCAAGGACCCAAGGCACATGTTGACAGATGATCTAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS GCA 72 bp TTCTCCCATAGCTCCCCTAGATCATCTGTCAACATGTaGCTTGGGTCCTTGATTGCAGGTGTCCTCTTCTGT +
Preference number: 6 (lower is better)
Translates to: FSHSSPRSSVNM*LGSLIAGVLFC
Trigger: ACAGAAGAGGACACCTGCAATCAAGGACCCAAGGCACATGTTGACAGATGATCTAGGGGAGCTATGGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS CAA 72 bp TCCCCTAGATCATCTGTCAACATGTGCCTTGGGTCCTaGATTGCAGGTGTCCTCTTCTGTACAGGCATGTCA +
Preference number: 6 (lower is better)
Translates to: SPRSSVNMCLGS*IAGVLFCTGMS
Trigger: TGACATGCCTGTACAGAAGAGGACACCTGCAATCAAGGACCCAAGGCACATGTTGACAGATGATCTAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS TCA 72 bp ACTCGAACTTTGCCAGAATTGGGCTCTCCAGAGCGCTaGGCAACTCCAGATAAACTGACAGGTAATCTTTGC +
Preference number: 6 (lower is better)
Translates to: TRTLPELGSPER*ATPDKLTGNLC
Trigger: GCAAAGATTACCTGTCAGTTTATCTGGAGTTGCTCAGCGCTCTGGAGAGCCCAATTCTGGCAAAGTTCGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS CAA 72 bp ATTCTAAGACCACATTTGGCTCCAAGAAAGAACACTTaGCAGAAGCCAGGGAGTGGAATGCTTCAGCCACCA +
Preference number: 6 (lower is better)
Translates to: ILRPHLAPRKNT*QKPGSGMLQPP
Trigger: TGGTGGCTGAAGCATTCCACTCCCTGGCTTCTGCAAAGTGTTCTTTCTTGGAGCCAAATGTGGTCTTAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS TCA 72 bp ATACGGTTCCAACTATGCTCACCTTGCAGCATATGGTaGACTGGTCTTCAGGGAGAAACCAATTCATATGGG +
Preference number: 6 (lower is better)
Translates to: IRFQLCSPCSIW*TGLQGETNSYG
Trigger: CCCATATGAATTGGTTTCTCCCTGAAGACCAGTTCACCATATGCTGCAAGGTGAGCATAGTTGGAACCGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS CAA 90 bp CCAGATAAACTGACAGGTAATCTTTGCTTTCTTCATCAACCCCATTaGGGTACAACCTCAAACACCATGCCACTTCCTTACTGGCCTCTA +
Preference number: 6 (lower is better)
Translates to: PDKLTGNLCFLHQPH*GTTSNTMPLPYWPL
Trigger: TAGAGGCCAGTAAGGAAGTGGCATGGTGTTTGAGGTTGTACCCAAATGGGGTTGATGAAGAAAGCAAAGATTACCTGTCAGTTTATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS TCA 72 bp TATGGGAAAGGAGAAGACCTCGAAGGAGAAACTTTTTaGATCCCCTGTGTTCGTATTGCAGAAAGCATTGGA +
Preference number: 6 (lower is better)
Translates to: YGKGEDLEGETF*IPCVRIAESIG
Trigger: TCCAATGCTTTCTGCAATACGAACACAGGGGATTCAAAAAGTTTCTCCTTCGAGGTCTTCTCCTTTCCCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS CCA 72 bp ATGGTGAACTGGTCTTCAGGGAGAAACCAATTCATATaGGAAAGGAGAAGACCTCGAAGGAGAAACTTTTTG +
Preference number: 6 (lower is better)
Translates to: MVNWSSGRNQFI*ERRRPRRRNFL
Trigger: CAAAAAGTTTCTCCTTCGAGGTCTTCTCCTTTCCCATATGAATTGGTTTCTCCCTGAAGACCAGTTCACCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS CAA 72 bp ATATGGGAAAGGAGAAGACCTCGAAGGAGAAACTTTTaGAATCCCCTGTGTTCGTATTGCAGAAAGCATTGG +
Preference number: 6 (lower is better)
Translates to: IWERRRPRRRNF*NPLCSYCRKHW
Trigger: CCAATGCTTTCTGCAATACGAACACAGGGGATTCAAAAAGTTTCTCCTTCGAGGTCTTCTCCTTTCCCATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS GCA 72 bp CGAAGGAGAAACTTTTTGAATCCCCTGTGTTCGTATTaGAGAAAGCATTGGACATTGGAGATCTTCCTACTT +
Preference number: 6 (lower is better)
Translates to: RRRNFLNPLCSY*RKHWTLEIFLL
Trigger: AAGTAGGAAGATCTCCAATGTCCAATGCTTTCTGCAATACGAACACAGGGGATTCAAAAAGTTTCTCCTTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS TCA 72 bp TCTTCCTACTTTGATATTTCTCTCCTTGGGAATTTATaGTCCAGAACTCGAACTTTGCCAGAATTGGGCTCT +
Preference number: 6 (lower is better)
Translates to: SSYFDISLLGNL*SRTRTLPELGS
Trigger: AGAGCCCAATTCTGGCAAAGTTCGAGTTCTGGATCATAAATTCCCAAGGAGAGAAATATCAAAGTAGGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS CAA 72 bp GACATTGGAGATCTTCCTACTTTGATATTTCTCTCCTaGGGAATTTATGATCCAGAACTCGAACTTTGCCAG +
Preference number: 6 (lower is better)
Translates to: DIGDLPTLIFLS*GIYDPELELCQ
Trigger: CTGGCAAAGTTCGAGTTCTGGATCATAAATTCCCAAGGAGAGAAATATCAAAGTAGGAAGATCTCCAATGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS CAA 90 bp GTGTTCGTATTGCAGAAAGCATTGGACATTGGAGATCTTCCTACTTaGATATTTCTCTCCTTGGGAATTTATGATCCAGAACTCGAACTT +
Preference number: 6 (lower is better)
Translates to: VFVLQKALDIGDLPT*IFLSLGIYDPELEL
Trigger: AAGTTCGAGTTCTGGATCATAAATTCCCAAGGAGAGAAATATCAAAGTAGGAAGATCTCCAATGTCCAATGCTTTCTGCAATACGAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS TCA 72 bp TGCAGAAAGCATTGGACATTGGAGATCTTCCTACTTTaGTATTTCTCTCCTTGGGAATTTATGATCCAGAAC +
Preference number: 6 (lower is better)
Translates to: CRKHWTLEIFLL*YFSPWEFMIQN
Trigger: GTTCTGGATCATAAATTCCCAAGGAGAGAAATATCAAAGTAGGAAGATCTCCAATGTCCAATGCTTTCTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4
CDS CAA 72 bp TTGCAGAAAGCATTGGACATTGGAGATCTTCCTACTTaGATATTTCTCTCCTTGGGAATTTATGATCCAGAA +
Preference number: 6 (lower is better)
Translates to: LQKALDIGDLPT*IFLSLGIYDPE
Trigger: TTCTGGATCATAAATTCCCAAGGAGAGAAATATCAAAGTAGGAAGATCTCCAATGTCCAATGCTTTCTGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000081780.4