Pregenerated sensors for TDPOZ1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000094084Ensembl transcript IDs: ENSMUST00000094413.5, ENSMUST00000181541.2
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGTTCACTGCAGATAGGTTTCTTCAAAGAAACTCAGTTAGCCCATaGCTAGGGCCAGCACCTAAATTATTCAGTTTGCAAGACATTAGA | + |
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Preference number: 1 (lower is better) Translates to: QFTADRFLQRNSVSP*LGPAPKLFSLQDIR Trigger: TCTAATGTCTTGCAAACTGAATAATTTAGGTGCTGGCCCTAGGCATGGGCTAACTGAGTTTCTTTGAAGAAACCTATCTGCAGTGAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| 3UTR-3UTR CCA 90 bp | ACTACTGGTGGGACAGCAAGGGTTCTGCACAAACATCCACAGCTGAGCTTGGCTAACTGTTTTTGGCTATaGAGACCAGAAGAGGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: TTGGTARVLHKHPQLSLANCFWL*RPEEGF Trigger: GAAGCCCTCTTCTGGTCTCCATAGCCAAAAACAGTT...AGCCAAGCTCAGCTGTGGATGTTTGTGCAGAACCCTTGCTGTCCCACCAGTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| 3UTR-3UTR TCA 90 bp | ACTACTGGTGGGACAGCAAGGGTTCTGCACAAACATCCACAGCTGAGCTTGGCTATTTCTCCTTTCCTCTaGCCAGTTATCTGTTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: TTGGTARVLHKHPQLSLAISPFL*PVICSA Trigger: AGCAGAACAGATAACTGGTCAGAGGAAAGGAGAAAT...AGCCAAGCTCAGCTGTGGATGTTTGTGCAGAACCCTTGCTGTCCCACCAGTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| 3UTR-3UTR GCA 90 bp | TCTACTACTGGTGGGACAGCAAGGGTTCTGCACAAACATCCACAGCTGAGCTTGTCCACCATGATGCCTTaGCCCAGATTCACTGTAAAT | + |
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Preference number: 2 (lower is better) Translates to: STTGGTARVLHKHPQLSLSTMMP*PRFTVN Trigger: ATTTACAGTGAATCTGGGGCAAGGCATCATGGTGGA...CAAGCTCAGCTGTGGATGTTTGTGCAGAACCCTTGCTGTCCCACCAGTAGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| 3UTR-3UTR CCA 90 bp | TCTACTACTGGTGGGACAGCAAGGGTTCTGCACAAACATCCACAGCTGAGCTTGCTACGGAACTGTTTTTaGCTATGGAGACCAGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: STTGGTARVLHKHPQLSLLRNCF*LWRPEE Trigger: CTCTTCTGGTCTCCATAGCCAAAAACAGTTCCGTAG...CAAGCTCAGCTGTGGATGTTTGTGCAGAACCCTTGCTGTCCCACCAGTAGTAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| 3UTR-3UTR TCA 90 bp | AGTAGACTCCCTCCAATTAGGCCTGCTCTTCTTAGTTGTCATAAGAGCATGATGCCAGTTACAGGTGGCTaGAAACTCCTCTGTGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: SRLPPIRPALLSCHKSMMPVTGG*KLLCVC Trigger: GCACACACAGAGGAGTTTTCAGCCACCTGTAACTGG...CATCATGCTCTTATGACAACTAAGAAGAGCAGGCCTAATTGGAGGGAGTCTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| 3UTR-3UTR TCA 90 bp | TCTACTACTGGTGGGACAGCAAGGGTTCTGCACAAACATCCACAGCTGAGCTTGGAAAACACTCATGTTTaGTTTCTCCTTTCCTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: STTGGTARVLHKHPQLSLENTHV*FLLSSD Trigger: GTCAGAGGAAAGGAGAAATCAAACATGAGTGTTTTC...CAAGCTCAGCTGTGGATGTTTGTGCAGAACCCTTGCTGTCCCACCAGTAGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| 3UTR-3UTR TCA 90 bp | CCCACAAACACTTCTCCCAGAAGGAGTAGACTCCCTCCAATTAGGCCTGCTCTTTTAAACAGAGTTCTCTaGGAGAGCAGTAATTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: PTNTSPRRSRLPPIRPALLNRVL*ESSNCF Trigger: AAAGCAATTACTGCTCTCTCAGAGAACTCTGTTTAA...AAGAGCAGGCCTAATTGGAGGGAGTCTACTCCTTCTGGGAGAAGTGTTTGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAGTAGACTCCCTCCAATTAGGCCTGCTCTTCTTAGTTGTCATAAGAGCATGTCCACCATGATGCCTTaGCCCAGATTCACTGTAAAT | + |
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Preference number: 2 (lower is better) Translates to: RSRLPPIRPALLSCHKSMSTMMP*PRFTVN Trigger: ATTTACAGTGAATCTGGGGCAAGGCATCATGGTGGA...CATGCTCTTATGACAACTAAGAAGAGCAGGCCTAATTGGAGGGAGTCTACTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| 3UTR-3UTR TCA 90 bp | AGTAGACTCCCTCCAATTAGGCCTGCTCTTCTTAGTTGTCATAAGAGCATGATGATTTCTCCTTTCCTCTaGCCAGTTATCTGTTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: SRLPPIRPALLSCHKSMMISPFL*PVICSA Trigger: AGCAGAACAGATAACTGGTCAGAGGAAAGGAGAAAT...CATCATGCTCTTATGACAACTAAGAAGAGCAGGCCTAATTGGAGGGAGTCTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTCTGAGAGAGCAGTAATTGCTTTTACAGCTGAGTTCCCACAAAATAAGTCTGAAAACACTCATGTTTaGTTTCTCCTTTCCTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: FSERAVIAFTAEFPQNKSENTHV*FLLSSD Trigger: GTCAGAGGAAAGGAGAAATCAAACATGAGTGTTTTC...AGACTTATTTTGTGGGAACTCAGCTGTAAAAGCAATTACTGCTCTCTCAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| 3UTR-3UTR GCA 90 bp | CCATGCCTAGGGCCAGCACCTAAATTATTCAGTTTGCAAGACATTAGACAAAAAGACGTTGTTGTTTGTTaGTCTTGGAAGAAAGATGTA | + |
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Preference number: 2 (lower is better) Translates to: PCLGPAPKLFSLQDIRQKDVVVC*SWKKDV Trigger: TACATCTTTCTTCCAAGAGCAACAAACAACAACGTC...TTTTTGTCTAATGTCTTGCAAACTGAATAATTTAGGTGCTGGCCCTAGGCATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTGAGAGAGCAGTAATTGCTTTTACAGCTGAGTTCCCACAAAATAAGTCTGACGTTGTTGTTTGTTaGTCTTGGAAGAAAGATGTA | + |
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Preference number: 2 (lower is better) Translates to: FSERAVIAFTAEFPQNKSDVVVC*SWKKDV Trigger: TACATCTTTCTTCCAAGAGCAACAAACAACAACGTC...AGACTTATTTTGTGGGAACTCAGCTGTAAAAGCAATTACTGCTCTCTCAGAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| 3UTR GCA 72 bp | TGTAGATGTCAGGTAGAAGGTCCCAGACTGCAGTGCTaGCCTTCCTACACCCACTATTTAACCATATTACAG | + |
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Preference number: 3 (lower is better) Translates to: CRCQVEGPRLQC*PSYTHYLTILQ Trigger: CTGTAATATGGTTAAATAGTGGGTGTAGGAAGGGCAGCACTGCAGTCTGGGACCTTCTACCTGACATCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| 3UTR GCA 72 bp | AAGTGTAGATGTCAGGTAGAAGGTCCCAGACTGCAGTaGTGCCCTTCCTACACCCACTATTTAACCATATTA | + |
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Preference number: 3 (lower is better) Translates to: KCRCQVEGPRLQ*CPSYTHYLTIL Trigger: TAATATGGTTAAATAGTGGGTGTAGGAAGGGCAGCACTGCAGTCTGGGACCTTCTACCTGACATCTACACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| 3UTR CCA 72 bp | ATTCCAAGAAAAAGGACAATGAGTTTCTACTACTGGTaGGACAGCAAGGGTTCTGCACAAACATCCACAGCT | + |
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Preference number: 3 (lower is better) Translates to: IPRKRTMSFYYW*DSKGSAQTSTA Trigger: AGCTGTGGATGTTTGTGCAGAACCCTTGCTGTCCCACCAGTAGTAGAAACTCATTGTCCTTTTTCTTGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| 3UTR-3UTR CAA 90 bp | AGGAGTAGACTCCCTCCAATTAGGCCTGCTCTTCTTAGTTGTCATAAGAGCATGAGACGTTGTTGTTTGTaGCTCTTGGAAGAAAGATGT | + |
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Preference number: 3 (lower is better) Translates to: RSRLPPIRPALLSCHKSMRRCCL*LLEERC Trigger: ACATCTTTCTTCCAAGAGCAACAAACAACAACGTCT...CATGCTCTTATGACAACTAAGAAGAGCAGGCCTAATTGGAGGGAGTCTACTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| 3UTR GCA 72 bp | GCAGATAGGTTTCTTCAAAGAAACTCAGTTAGCCCATaGCTAGGGCCAGCACCTAAATTATTCAGTTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: ADRFLQRNSVSP*LGPAPKLFSLQ Trigger: TTGCAAACTGAATAATTTAGGTGCTGGCCCTAGGCATGGGCTAACTGAGTTTCTTTGAAGAAACCTATCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| 3UTR-3UTR CAA 90 bp | AGTAGACTCCCTCCAATTAGGCCTGCTCTTCTTAGTTGTCATAAGAGCATGATGAGACGTTGTTGTTTGTaGCTCTTGGAAGAAAGATGT | + |
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Preference number: 3 (lower is better) Translates to: SRLPPIRPALLSCHKSMMRRCCL*LLEERC Trigger: ACATCTTTCTTCCAAGAGCAACAAACAACAACGTCT...CATCATGCTCTTATGACAACTAAGAAGAGCAGGCCTAATTGGAGGGAGTCTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CCA 90 bp | CCCACAAACACTTCTCCCAGAAGGAGTAGACTCCCTCCAATTAGGCCTGCTCTTTCACAGGCCATGGAGTaGCTGTGGAGGTGTGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: PTNTSPRRSRLPPIRPALSQAME*LWRCGA Trigger: GGCACCACACCTCCACAGCCACTCCATGGCCTGTGA...AAGAGCAGGCCTAATTGGAGGGAGTCTACTCCTTCTGGGAGAAGTGTTTGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CCA 90 bp | CCCACAAACACTTCTCCCAGAAGGAGTAGACTCCCTCCAATTAGGCCTGCTCTTGCACATCACAGGCCATaGAGTGGCTGTGGAGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: PTNTSPRRSRLPPIRPALAHHRP*SGCGGV Trigger: CACACCTCCACAGCCACTCCATGGCCTGTGATGTGC...AAGAGCAGGCCTAATTGGAGGGAGTCTACTCCTTCTGGGAGAAGTGTTTGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CCA 90 bp | TCTACTACTGGTGGGACAGCAAGGGTTCTGCACAAACATCCACAGCTGAGCTTGGCACATCACAGGCCATaGAGTGGCTGTGGAGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: STTGGTARVLHKHPQLSLAHHRP*SGCGGV Trigger: CACACCTCCACAGCCACTCCATGGCCTGTGATGTGC...CAAGCTCAGCTGTGGATGTTTGTGCAGAACCCTTGCTGTCCCACCAGTAGTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR TCA 90 bp | ACTACTGGTGGGACAGCAAGGGTTCTGCACAAACATCCACAGCTGAGCTTGGCTTTGCCTTGTGAGCCCTaGATTCATGGCCAGCTACCA | + |
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Preference number: 4 (lower is better) Translates to: TTGGTARVLHKHPQLSLALPCEP*IHGQLP Trigger: TGGTAGCTGGCCATGAATTCAGGGCTCACAAGGCAA...AGCCAAGCTCAGCTGTGGATGTTTGTGCAGAACCCTTGCTGTCCCACCAGTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR TCA 90 bp | ACTACTGGTGGGACAGCAAGGGTTCTGCACAAACATCCACAGCTGAGCTTGGCTACAGACAGCAGTCTGTaGAGAGGGAATTCTCCCACA | + |
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Preference number: 4 (lower is better) Translates to: TTGGTARVLHKHPQLSLATDSSL*RGNSPT Trigger: TGTGGGAGAATTCCCTCTTCACAGACTGCTGTCTGT...AGCCAAGCTCAGCTGTGGATGTTTGTGCAGAACCCTTGCTGTCCCACCAGTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR TCA 90 bp | CCCACAAACACTTCTCCCAGAAGGAGTAGACTCCCTCCAATTAGGCCTGCTCTTTTGCCTTGTGAGCCCTaGATTCATGGCCAGCTACCA | + |
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Preference number: 4 (lower is better) Translates to: PTNTSPRRSRLPPIRPALLPCEP*IHGQLP Trigger: TGGTAGCTGGCCATGAATTCAGGGCTCACAAGGCAA...AAGAGCAGGCCTAATTGGAGGGAGTCTACTCCTTCTGGGAGAAGTGTTTGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR GCA 90 bp | ACTACTGGTGGGACAGCAAGGGTTCTGCACAAACATCCACAGCTGAGCTTGGCTTCACAGAGAGGTTCCTaGAAAGGGCATCCTCACACA | + |
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Preference number: 4 (lower is better) Translates to: TTGGTARVLHKHPQLSLASQRGS*KGHPHT Trigger: TGTGTGAGGATGCCCTTTGCAGGAACCTCTCTGTGA...AGCCAAGCTCAGCTGTGGATGTTTGTGCAGAACCCTTGCTGTCCCACCAGTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CCA 90 bp | AGGAGTAGACTCCCTCCAATTAGGCCTGCTCTTCTTAGTTGTCATAAGAGCATGTCACAGGCCATGGAGTaGCTGTGGAGGTGTGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: RSRLPPIRPALLSCHKSMSQAME*LWRCGA Trigger: GGCACCACACCTCCACAGCCACTCCATGGCCTGTGA...CATGCTCTTATGACAACTAAGAAGAGCAGGCCTAATTGGAGGGAGTCTACTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CCA 90 bp | CCCACAAACACTTCTCCCAGAAGGAGTAGACTCCCTCCAATTAGGCCTGCTCTTGCCACCAAGTGGGGATaGGACTCCAATATCGACTTC | + |
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Preference number: 4 (lower is better) Translates to: PTNTSPRRSRLPPIRPALATKWG*DSNIDF Trigger: GAAGTCGATATTGGAGTCCCATCCCCACTTGGTGGC...AAGAGCAGGCCTAATTGGAGGGAGTCTACTCCTTCTGGGAGAAGTGTTTGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR TCA 90 bp | ACTACTGGTGGGACAGCAAGGGTTCTGCACAAACATCCACAGCTGAGCTTGGCTGGATCTGCAGATGGCTaGGCAAAACTAGGTAAACTG | + |
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Preference number: 4 (lower is better) Translates to: TTGGTARVLHKHPQLSLAGSADG*AKLGKL Trigger: CAGTTTACCTAGTTTTGCTCAGCCATCTGCAGATCC...AGCCAAGCTCAGCTGTGGATGTTTGTGCAGAACCCTTGCTGTCCCACCAGTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR TCA 90 bp | TCTACTACTGGTGGGACAGCAAGGGTTCTGCACAAACATCCACAGCTGAGCTTGACAGACAGCAGTCTGTaGAGAGGGAATTCTCCCACA | + |
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Preference number: 4 (lower is better) Translates to: STTGGTARVLHKHPQLSLTDSSL*RGNSPT Trigger: TGTGGGAGAATTCCCTCTTCACAGACTGCTGTCTGT...CAAGCTCAGCTGTGGATGTTTGTGCAGAACCCTTGCTGTCCCACCAGTAGTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR GCA 90 bp | ACTACTGGTGGGACAGCAAGGGTTCTGCACAAACATCCACAGCTGAGCTTGGCTCACCCTCAAACACCATaGCACTTCCTTATTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: TTGGTARVLHKHPQLSLAHPQTP*HFLILL Trigger: GAGGAGAATAAGGAAGTGGCATGGTGTTTGAGGGTG...AGCCAAGCTCAGCTGTGGATGTTTGTGCAGAACCCTTGCTGTCCCACCAGTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR GCA 90 bp | TCTACTACTGGTGGGACAGCAAGGGTTCTGCACAAACATCCACAGCTGAGCTTGGCCCAAACTGGGATCTaGAGATGGCTGAGCAAAACT | + |
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Preference number: 4 (lower is better) Translates to: STTGGTARVLHKHPQLSLAQTGI*RWLSKT Trigger: AGTTTTGCTCAGCCATCTGCAGATCCCAGTTTGGGC...CAAGCTCAGCTGTGGATGTTTGTGCAGAACCCTTGCTGTCCCACCAGTAGTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR GCA 90 bp | ACTACTGGTGGGACAGCAAGGGTTCTGCACAAACATCCACAGCTGAGCTTGGCTCCAGAACTTGAACTTTaGCCAAACTGGGATCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: TTGGTARVLHKHPQLSLAPELEL*PNWDLQ Trigger: CTGCAGATCCCAGTTTGGGCAAAGTTCAAGTTCTGG...AGCCAAGCTCAGCTGTGGATGTTTGTGCAGAACCCTTGCTGTCCCACCAGTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CCA 90 bp | CCCACAAACACTTCTCCCAGAAGGAGTAGACTCCCTCCAATTAGGCCTGCTCTTCAACACTGCTCTGTGTaGAGCCCCAGTTCTCGAATT | + |
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Preference number: 4 (lower is better) Translates to: PTNTSPRRSRLPPIRPALQHCSV*SPSSRI Trigger: AATTCGAGAACTGGGGCTCCACACAGAGCAGTGTTG...AAGAGCAGGCCTAATTGGAGGGAGTCTACTCCTTCTGGGAGAAGTGTTTGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CCA 90 bp | CCCACAAACACTTCTCCCAGAAGGAGTAGACTCCCTCCAATTAGGCCTGCTCTTGAACTTTGCCCAAACTaGGATCTGCAGATGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: PTNTSPRRSRLPPIRPALELCPN*DLQMAE Trigger: CTCAGCCATCTGCAGATCCCAGTTTGGGCAAAGTTC...AAGAGCAGGCCTAATTGGAGGGAGTCTACTCCTTCTGGGAGAAGTGTTTGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR TCA 90 bp | CCCACAAACACTTCTCCCAGAAGGAGTAGACTCCCTCCAATTAGGCCTGCTCTTGGTGCCTTGGATCCTTaGTTGCAGGTGTTATGTTTT | + |
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Preference number: 4 (lower is better) Translates to: PTNTSPRRSRLPPIRPALGALDP*LQVLCF Trigger: AAAACATAACACCTGCAATCAAGGATCCAAGGCACC...AAGAGCAGGCCTAATTGGAGGGAGTCTACTCCTTCTGGGAGAAGTGTTTGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR GCA 90 bp | ACTACTGGTGGGACAGCAAGGGTTCTGCACAAACATCCACAGCTGAGCTTGGCTCTGACAGGTAATCTTTaGTTTCTTTATCAGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: TTGGTARVLHKHPQLSLALTGNL*FLYQPP Trigger: AGGGGGCTGATAAAGAAAGCAAAGATTACCTGTCAG...AGCCAAGCTCAGCTGTGGATGTTTGTGCAGAACCCTTGCTGTCCCACCAGTAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR TCA 90 bp | AGTAGACTCCCTCCAATTAGGCCTGCTCTTCTTAGTTGTCATAAGAGCATGATGGCTAGGATTGCCTTGTaGGCCCTGAATTCATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: SRLPPIRPALLSCHKSMMARIAL*ALNSWP Trigger: TGGCCATGAATTCAGGGCTCACAAGGCAATCCTAGC...CATCATGCTCTTATGACAACTAAGAAGAGCAGGCCTAATTGGAGGGAGTCTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CCA 90 bp | AGGAGTAGACTCCCTCCAATTAGGCCTGCTCTTCTTAGTTGTCATAAGAGCATGCAACACTGCTCTGTGTaGAGCCCCAGTTCTCGAATT | + |
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Preference number: 4 (lower is better) Translates to: RSRLPPIRPALLSCHKSMQHCSV*SPSSRI Trigger: AATTCGAGAACTGGGGCTCCACACAGAGCAGTGTTG...CATGCTCTTATGACAACTAAGAAGAGCAGGCCTAATTGGAGGGAGTCTACTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CCA 90 bp | AGTAGACTCCCTCCAATTAGGCCTGCTCTTCTTAGTTGTCATAAGAGCATGATGGCTTCAGCCACCAAGTaGGGATGGGACTCCAATATC | + |
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Preference number: 4 (lower is better) Translates to: SRLPPIRPALLSCHKSMMASATK*GWDSNI Trigger: GATATTGGAGTCCCATCCCCACTTGGTGGCTGAAGC...CATCATGCTCTTATGACAACTAAGAAGAGCAGGCCTAATTGGAGGGAGTCTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR TCA 90 bp | AGGAGTAGACTCCCTCCAATTAGGCCTGCTCTTCTTAGTTGTCATAAGAGCATGGGATCTGCAGATGGCTaGGCAAAACTAGGTAAACTG | + |
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Preference number: 4 (lower is better) Translates to: RSRLPPIRPALLSCHKSMGSADG*AKLGKL Trigger: CAGTTTACCTAGTTTTGCTCAGCCATCTGCAGATCC...CATGCTCTTATGACAACTAAGAAGAGCAGGCCTAATTGGAGGGAGTCTACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR GCA 90 bp | AGTAGACTCCCTCCAATTAGGCCTGCTCTTCTTAGTTGTCATAAGAGCATGATGCCAGAACTTGAACTTTaGCCAAACTGGGATCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SRLPPIRPALLSCHKSMMPELEL*PNWDLQ Trigger: CTGCAGATCCCAGTTTGGGCAAAGTTCAAGTTCTGG...CATCATGCTCTTATGACAACTAAGAAGAGCAGGCCTAATTGGAGGGAGTCTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR GCA 90 bp | TTCTCTGAGAGAGCAGTAATTGCTTTTACAGCTGAGTTCCCACAAAATAAGTCTGCTGTGGAGGTGTGGTaGCTTCCCCGTGTAGATGAA | + |
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Preference number: 4 (lower is better) Translates to: FSERAVIAFTAEFPQNKSAVEVW*LPRVDE Trigger: TTCATCTACACGGGGAAGGCACCACACCTCCACAGC...AGACTTATTTTGTGGGAACTCAGCTGTAAAAGCAATTACTGCTCTCTCAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR GCA 90 bp | CTGCCCTTCCTACACCCACTATTTAACCATATTACAGGTGATTTAAATCCTCATGCTGTGGAGGTGTGGTaGCTTCCCCGTGTAGATGAA | + |
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Preference number: 4 (lower is better) Translates to: LPFLHPLFNHITGDLNPHAVEVW*LPRVDE Trigger: TTCATCTACACGGGGAAGGCACCACACCTCCACAGC...ATGAGGATTTAAATCACCTGTAATATGGTTAAATAGTGGGTGTAGGAAGGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR GCA 90 bp | AGTAGACTCCCTCCAATTAGGCCTGCTCTTCTTAGTTGTCATAAGAGCATGATGCAAGAAAGAACACTGTaGAGAAGCCAGGGACTGGAA | + |
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Preference number: 4 (lower is better) Translates to: SRLPPIRPALLSCHKSMMQERTL*RSQGLE Trigger: TTCCAGTCCCTGGCTTCTGCACAGTGTTCTTTCTTG...CATCATGCTCTTATGACAACTAAGAAGAGCAGGCCTAATTGGAGGGAGTCTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CCA 90 bp | CCATGCCTAGGGCCAGCACCTAAATTATTCAGTTTGCAAGACATTAGACAAAAAGCTTCAGCCACCAAGTaGGGATGGGACTCCAATATC | + |
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Preference number: 4 (lower is better) Translates to: PCLGPAPKLFSLQDIRQKASATK*GWDSNI Trigger: GATATTGGAGTCCCATCCCCACTTGGTGGCTGAAGC...TTTTTGTCTAATGTCTTGCAAACTGAATAATTTAGGTGCTGGCCCTAGGCATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CCA 90 bp | CCATGCCTAGGGCCAGCACCTAAATTATTCAGTTTGCAAGACATTAGACAAAAAATACTTGTCAGCAGCTaGCAGCACATCACAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: PCLGPAPKLFSLQDIRQKILVSS*QHITGH Trigger: ATGGCCTGTGATGTGCTGCCAGCTGCTGACAAGTAT...TTTTTGTCTAATGTCTTGCAAACTGAATAATTTAGGTGCTGGCCCTAGGCATGG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR TCA 90 bp | CCATGCCTAGGGCCAGCACCTAAATTATTCAGTTTGCAAGACATTAGACAAAAAATGAAATCAAGGGCCTaGGTCTTCAGCTTCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: PCLGPAPKLFSLQDIRQKMKSRA*VFSFSV Trigger: CACAGAGAAGCTGAAGACTCAGGCCCTTGATTTCAT...TTTTTGTCTAATGTCTTGCAAACTGAATAATTTAGGTGCTGGCCCTAGGCATGG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR GCA 90 bp | CCATGCCTAGGGCCAGCACCTAAATTATTCAGTTTGCAAGACATTAGACAAAAACACCCTCAAACACCATaGCACTTCCTTATTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: PCLGPAPKLFSLQDIRQKHPQTP*HFLILL Trigger: GAGGAGAATAAGGAAGTGGCATGGTGTTTGAGGGTG...TTTTTGTCTAATGTCTTGCAAACTGAATAATTTAGGTGCTGGCCCTAGGCATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR GCA 90 bp | CTGCCCTTCCTACACCCACTATTTAACCATATTACAGGTGATTTAAATCCTCATTCACAGAGAGGTTCCTaGAAAGGGCATCCTCACACA | + |
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Preference number: 4 (lower is better) Translates to: LPFLHPLFNHITGDLNPHSQRGS*KGHPHT Trigger: TGTGTGAGGATGCCCTTTGCAGGAACCTCTCTGTGA...ATGAGGATTTAAATCACCTGTAATATGGTTAAATAGTGGGTGTAGGAAGGGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR GCA 90 bp | CCATGCCTAGGGCCAGCACCTAAATTATTCAGTTTGCAAGACATTAGACAAAAACAAGAAAGAACACTGTaGAGAAGCCAGGGACTGGAA | + |
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Preference number: 4 (lower is better) Translates to: PCLGPAPKLFSLQDIRQKQERTL*RSQGLE Trigger: TTCCAGTCCCTGGCTTCTGCACAGTGTTCTTTCTTG...TTTTTGTCTAATGTCTTGCAAACTGAATAATTTAGGTGCTGGCCCTAGGCATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CCA 90 bp | TTCTCTGAGAGAGCAGTAATTGCTTTTACAGCTGAGTTCCCACAAAATAAGTCTGAACTTTGCCCAAACTaGGATCTGCAGATGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: FSERAVIAFTAEFPQNKSELCPN*DLQMAE Trigger: CTCAGCCATCTGCAGATCCCAGTTTGGGCAAAGTTC...AGACTTATTTTGTGGGAACTCAGCTGTAAAAGCAATTACTGCTCTCTCAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CCA 90 bp | TTCTCTGAGAGAGCAGTAATTGCTTTTACAGCTGAGTTCCCACAAAATAAGTCTTTTATCAGCCCCCTTTaGGTACACCCTCAAACACCA | + |
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Preference number: 4 (lower is better) Translates to: FSERAVIAFTAEFPQNKSFISPL*VHPQTP Trigger: TGGTGTTTGAGGGTGTACCCAAAGGGGGCTGATAAA...AGACTTATTTTGTGGGAACTCAGCTGTAAAAGCAATTACTGCTCTCTCAGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR TCA 90 bp | AGTAGACTCCCTCCAATTAGGCCTGCTCTTCTTAGTTGTCATAAGAGCATGATGGCAGGTGTTATGTTTTaGCTAGGCATGTTATATTTG | + |
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Preference number: 4 (lower is better) Translates to: SRLPPIRPALLSCHKSMMAGVMF*LGMLYL Trigger: CAAATATAACATGCCTAGTCAAAACATAACACCTGC...CATCATGCTCTTATGACAACTAAGAAGAGCAGGCCTAATTGGAGGGAGTCTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR GCA 90 bp | CCATGCCTAGGGCCAGCACCTAAATTATTCAGTTTGCAAGACATTAGACAAAAACTGACAGGTAATCTTTaGTTTCTTTATCAGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: PCLGPAPKLFSLQDIRQKLTGNL*FLYQPP Trigger: AGGGGGCTGATAAAGAAAGCAAAGATTACCTGTCAG...TTTTTGTCTAATGTCTTGCAAACTGAATAATTTAGGTGCTGGCCCTAGGCATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR TCA 90 bp | CCATGCCTAGGGCCAGCACCTAAATTATTCAGTTTGCAAGACATTAGACAAAAAGCAGGTGTTATGTTTTaGCTAGGCATGTTATATTTG | + |
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Preference number: 4 (lower is better) Translates to: PCLGPAPKLFSLQDIRQKAGVMF*LGMLYL Trigger: CAAATATAACATGCCTAGTCAAAACATAACACCTGC...TTTTTGTCTAATGTCTTGCAAACTGAATAATTTAGGTGCTGGCCCTAGGCATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS CCA 90 bp | AGCAGCTGGCAGCACATCACAGGCCATGGAGTGGCTGTGGAGGTGTaGTGCCTTCCCCGTGTAGATGAAACCCATCATCTCCTTGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: SSWQHITGHGVAVEV*CLPRVDETHHLLED Trigger: GTCTTCAAGGAGATGATGGGTTTCATCTACACGGGGAAGGCACCACACCTCCACAGCCACTCCATGGCCTGTGATGTGCTGCCAGCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS GCA 90 bp | AGCTGGCAGCACATCACAGGCCATGGAGTGGCTGTGGAGGTGTGGTaGCTTCCCCGTGTAGATGAAACCCATCATCTCCTTGAAGACTTG | + |
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Preference number: 5 (lower is better) Translates to: SWQHITGHGVAVEVW*LPRVDETHHLLEDL Trigger: CAAGTCTTCAAGGAGATGATGGGTTTCATCTACACGGGGAAGGCACCACACCTCCACAGCCACTCCATGGCCTGTGATGTGCTGCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CAA 90 bp | ACTACTGGTGGGACAGCAAGGGTTCTGCACAAACATCCACAGCTGAGCTTGGCTCTCACCAGGCCATACTaGTCAGCAGCTGGCAGCACA | + |
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Preference number: 5 (lower is better) Translates to: TTGGTARVLHKHPQLSLALTRPY*SAAGST Trigger: TGTGCTGCCAGCTGCTGACAAGTATGGCCTGGTGAG...AGCCAAGCTCAGCTGTGGATGTTTGTGCAGAACCCTTGCTGTCCCACCAGTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS CCA 90 bp | TGTGCAGAAGCCAGGGACTGGAATGCTTCAGCCACCAAGTGGGGATaGGACTCCAATATCGACTTCCACTCTGAGGTCTCACAGACCTCA | + |
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Preference number: 5 (lower is better) Translates to: CAEARDWNASATKWG*DSNIDFHSEVSQTS Trigger: TGAGGTCTGTGAGACCTCAGAGTGGAAGTCGATATTGGAGTCCCATCCCCACTTGGTGGCTGAAGCATTCCAGTCCCTGGCTTCTGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS TCA 90 bp | TTCAGCCACCAAGTGGGGATGGGACTCCAATATCGACTTCCACTCTaGGGTCTCACAGACCTCAGAGGCATAGTAGGCAATGAAATCAAG | + |
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Preference number: 5 (lower is better) Translates to: FSHQVGMGLQYRLPL*GLTDLRGIVGNEIK Trigger: CTTGATTTCATTGCCTACTATGCCTCTGAGGTCTGTGAGACCTCAGAGTGGAAGTCGATATTGGAGTCCCATCCCCACTTGGTGGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CAA 90 bp | CCCACAAACACTTCTCCCAGAAGGAGTAGACTCCCTCCAATTAGGCCTGCTCTTAAACCCATCATCTCCTaGAAGACTTGGGGATTCAGG | + |
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Preference number: 5 (lower is better) Translates to: PTNTSPRRSRLPPIRPALKPIIS*KTWGFR Trigger: CCTGAATCCCCAAGTCTTCAAGGAGATGATGGGTTT...AAGAGCAGGCCTAATTGGAGGGAGTCTACTCCTTCTGGGAGAAGTGTTTGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS TCA 90 bp | GGCAATTCCGATGGGAGAGGAGGAGATCTCGAGGGAGAAACTTTTTaGATCCATTCTGTTCATTTGTCAGAAAGCATTCCACAGTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: GNSDGRGGDLEGETF*IHSVHLSESIPQWG Trigger: GCCCCACTGTGGAATGCTTTCTGACAAATGAACAGAATGGATTCAAAAAGTTTCTCCCTCGAGATCTCCTCCTCTCCCATCGGAATTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CAA 90 bp | ACTACTGGTGGGACAGCAAGGGTTCTGCACAAACATCCACAGCTGAGCTTGGCTATCCATTCTGTTCATTaGTCAGAAAGCATTCCACAG | + |
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Preference number: 5 (lower is better) Translates to: TTGGTARVLHKHPQLSLAIHSVH*SESIPQ Trigger: CTGTGGAATGCTTTCTGACAAATGAACAGAATGGAT...AGCCAAGCTCAGCTGTGGATGTTTGTGCAGAACCCTTGCTGTCCCACCAGTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CAA 90 bp | TTCTCTGAGAGAGCAGTAATTGCTTTTACAGCTGAGTTCCCACAAAATAAGTCTCTCACCAGGCCATACTaGTCAGCAGCTGGCAGCACA | + |
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Preference number: 5 (lower is better) Translates to: FSERAVIAFTAEFPQNKSLTRPY*SAAGST Trigger: TGTGCTGCCAGCTGCTGACAAGTATGGCCTGGTGAG...AGACTTATTTTGTGGGAACTCAGCTGTAAAAGCAATTACTGCTCTCTCAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CAA 90 bp | AGTAGACTCCCTCCAATTAGGCCTGCTCTTCTTAGTTGTCATAAGAGCATGATGAAACCCATCATCTCCTaGAAGACTTGGGGATTCAGG | + |
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Preference number: 5 (lower is better) Translates to: SRLPPIRPALLSCHKSMMKPIIS*KTWGFR Trigger: CCTGAATCCCCAAGTCTTCAAGGAGATGATGGGTTT...CATCATGCTCTTATGACAACTAAGAAGAGCAGGCCTAATTGGAGGGAGTCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CAA 90 bp | AGGAGTAGACTCCCTCCAATTAGGCCTGCTCTTCTTAGTTGTCATAAGAGCATGCATCTCCTTGAAGACTaGGGGATTCAGGTTATGAAT | + |
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Preference number: 5 (lower is better) Translates to: RSRLPPIRPALLSCHKSMHLLED*GIQVMN Trigger: ATTCATAACCTGAATCCCCAAGTCTTCAAGGAGATG...CATGCTCTTATGACAACTAAGAAGAGCAGGCCTAATTGGAGGGAGTCTACTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CAA 90 bp | AGTAGACTCCCTCCAATTAGGCCTGCTCTTCTTAGTTGTCATAAGAGCATGATGTTTATGATCCAGAACTaGAACTTTGCCCAAACTGGG | + |
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Preference number: 5 (lower is better) Translates to: SRLPPIRPALLSCHKSMMFMIQN*NFAQTG Trigger: CCCAGTTTGGGCAAAGTTCAAGTTCTGGATCATAAA...CATCATGCTCTTATGACAACTAAGAAGAGCAGGCCTAATTGGAGGGAGTCTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CAA 90 bp | AGTAGACTCCCTCCAATTAGGCCTGCTCTTCTTAGTTGTCATAAGAGCATGATGATCCATTCTGTTCATTaGTCAGAAAGCATTCCACAG | + |
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Preference number: 5 (lower is better) Translates to: SRLPPIRPALLSCHKSMMIHSVH*SESIPQ Trigger: CTGTGGAATGCTTTCTGACAAATGAACAGAATGGAT...CATCATGCTCTTATGACAACTAAGAAGAGCAGGCCTAATTGGAGGGAGTCTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS-3UTR CAA 90 bp | CCATGCCTAGGGCCAGCACCTAAATTATTCAGTTTGCAAGACATTAGACAAAAATTTATGATCCAGAACTaGAACTTTGCCCAAACTGGG | + |
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Preference number: 5 (lower is better) Translates to: PCLGPAPKLFSLQDIRQKFMIQN*NFAQTG Trigger: CCCAGTTTGGGCAAAGTTCAAGTTCTGGATCATAAA...TTTTTGTCTAATGTCTTGCAAACTGAATAATTTAGGTGCTGGCCCTAGGCATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS CAA 90 bp | CAAAGGGCATCCTCACACAGGACCTTCAGGCTCACCAGGCCATACTaGTCAGCAGCTGGCAGCACATCACAGGCCATGGAGTGGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: QRASSHRTFRLTRPY*SAAGSTSQAMEWLW Trigger: CCACAGCCACTCCATGGCCTGTGATGTGCTGCCAGCTGCTGACAAGTATGGCCTGGTGAGCCTGAAGGTCCTGTGTGAGGATGCCCTTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS CCA 72 bp | GCCAGGGACTGGAATGCTTCAGCCACCAAGTGGGGATaGGACTCCAATATCGACTTCCACTCTGAGGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: ARDWNASATKWG*DSNIDFHSEVS Trigger: TGAGACCTCAGAGTGGAAGTCGATATTGGAGTCCCATCCCCACTTGGTGGCTGAAGCATTCCAGTCCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS TCA 72 bp | CAAGTGGGGATGGGACTCCAATATCGACTTCCACTCTaGGGTCTCACAGACCTCAGAGGCATAGTAGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: QVGMGLQYRLPL*GLTDLRGIVGN Trigger: ATTGCCTACTATGCCTCTGAGGTCTGTGAGACCTCAGAGTGGAAGTCGATATTGGAGTCCCATCCCCACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS GCA 72 bp | CTCTCCTTGGGAATTTATGATCCAGAACTTGAACTTTaGCCAAACTGGGATCTGCAGATGGCTGAGCAAAAC | + |
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Preference number: 6 (lower is better) Translates to: LSLGIYDPELEL*PNWDLQMAEQN Trigger: GTTTTGCTCAGCCATCTGCAGATCCCAGTTTGGGCAAAGTTCAAGTTCTGGATCATAAATTCCCAAGGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS CCA 72 bp | TCCATTTATAGCAGAATTTCTCAACACTGCTCTGTGTaGAGCCCCAGTTCTCGAATTCCATGTCCTCTGACA | + |
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Preference number: 6 (lower is better) Translates to: SIYSRISQHCSV*SPSSRIPCPLT Trigger: TGTCAGAGGACATGGAATTCGAGAACTGGGGCTCCACACAGAGCAGTGTTGAGAAATTCTGCTATAAATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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| CDS CAA 90 bp | CTGTTCATTTGTCAGAAAGCATTCCACAGTGGGGCTCTTTATTTTTaGATATTTCTCTCCTTGGGAATTTATGATCCAGAACTTGAACTT | + |
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Preference number: 6 (lower is better) Translates to: LFICQKAFHSGALYF*IFLSLGIYDPELEL Trigger: AAGTTCAAGTTCTGGATCATAAATTCCCAAGGAGAGAAATATCAAAAAATAAAGAGCCCCACTGTGGAATGCTTTCTGACAAATGAACAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094413.5 ENSMUST00000181541.2 |
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