Pregenerated sensors for TDP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021177Ensembl transcript IDs: ENSMUST00000021594.5, ENSMUST00000137653.2, ENSMUST00000153627.8
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | AGCCAAGAAGGACTTTTGCGAGGAGTCCTGTACGGGTaGAGGACTTTAAGGGGAGGTGAATGTTCAGTCGTC | + |
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Preference number: 3 (lower is better) Translates to: SQEGLLRGVLYG*RTLRGGECSVV Trigger: GACGACTGAACATTCACCTCCCCTTAAAGTCCTGCACCCGTACAGGACTCCTCGCAAAAGTCCTTCTTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR TCA 90 bp | TTGCGAGGAGTCCTGTACGGGTGCAGGACTTTAAGGGGAGGTGAATGTTCAGTCTGCCCAGCCTGGGGGTaGGAGGATGCTGACGGCTTA | + |
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Preference number: 4 (lower is better) Translates to: LRGVLYGCRTLRGGECSVCPAWG*EDADGL Trigger: TAAGCCGTCAGCATCCTCTCACCCCCAGGCTGGGCA...GACTGAACATTCACCTCCCCTTAAAGTCCTGCACCCGTACAGGACTCCTCGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR GCA 90 bp | CATAGCCAAGAAGGACTTTTGCGAGGAGTCCTGTACGGGTGCAGGACTTTAAGGGCTGGTCATCATCGCTaGTGGAGAGACACCAGCCGA | + |
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Preference number: 4 (lower is better) Translates to: HSQEGLLRGVLYGCRTLRAGHHR*WRDTSR Trigger: TCGGCTGGTGTCTCTCCAGCAGCGATGATGACCAGC...CCTTAAAGTCCTGCACCCGTACAGGACTCCTCGCAAAAGTCCTTCTTGGCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR TCA 90 bp | TTGCGAGGAGTCCTGTACGGGTGCAGGACTTTAAGGGGAGGTGAATGTTCAGTCCTGAGCAGGTGTATATaGGCTCCTTCGACACTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LRGVLYGCRTLRGGECSVLSRCI*APSTLP Trigger: AGGGAGTGTCGAAGGAGCTCATATACACCTGCTCAG...GACTGAACATTCACCTCCCCTTAAAGTCCTGCACCCGTACAGGACTCCTCGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR TCA 90 bp | ACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGGAGTCCGGTTGGAGGTGTGGATaGCAACTCGGAGGCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: TLTMTTRHIAKKDFCEESGWRCG*QLGGLL Trigger: AAGAAGGCCTCCGAGTTGTCATCCACACCTCCAACC...GGACTCCTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR GCA 90 bp | ACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGGAGTCCGGTGTGGACGGGGCATaGGCTTGCAGAAGCTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: TLTMTTRHIAKKDFCEESGVDGA*ACRSFL Trigger: TAGAAAGCTTCTGCAAGCGCATGCCCCGTCCACACC...GGACTCCTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| 3UTR CAA 72 bp | GACAATGACCACCAGACACATAGCCAAGAAGGACTTTaGCGAGGAGTCCTGTACGGGTGCAGGACTTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DNDHQTHSQEGL*RGVLYGCRTLR Trigger: CCTTAAAGTCCTGCACCCGTACAGGACTCCTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR TCA 90 bp | GACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGGAGTCCTGTACACAGATTCGCACTTGTaGCCAGGAACCAAGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: DNDHQTHSQEGLLRGVLYTDSHL*PGTKPV Trigger: AACTGGCTTGGTTCCTGGTCACAAGTGCGAATCTGT...GTACAGGACTCCTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR TCA 90 bp | TTGCGAGGAGTCCTGTACGGGTGCAGGACTTTAAGGGGAGGTGAATGTTCAGTCGCGTGTCAGGTGCTTTaGCATAAGGAATGTTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: LRGVLYGCRTLRGGECSVACQVL*HKECSK Trigger: TTTGGAACATTCCTTATGTCAAAGCACCTGACACGC...GACTGAACATTCACCTCCCCTTAAAGTCCTGCACCCGTACAGGACTCCTCGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR GCA 90 bp | GACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGGAGTCCTGTACATGTCTATCCACTCCTaGAGAGGGGGAGCGTTATAC | + |
|
Preference number: 4 (lower is better) Translates to: DNDHQTHSQEGLLRGVLYMSIHS*RGGALY Trigger: GTATAACGCTCCCCCTCTGCAGGAGTGGATAGACAT...GTACAGGACTCCTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR GCA 90 bp | TTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGCCGTTCTTCTCCAGTaGCCCCCAGGCAGCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LIRTLTMTTRHIAKKDFCAVLLQ*PPGSLG Trigger: TCCAAGGCTGCCTGGGGGGCACTGGAGAAGAACGGC...GCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR GCA 90 bp | ACCTCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGCCGTTCTTCTCCAGTaGCCCCCAGGCAGCCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: TSSLIRTLTMTTRHIAKKAVLLQ*PPGSLG Trigger: TCCAAGGCTGCCTGGGGGGCACTGGAGAAGAACGGC...CTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR GCA 90 bp | GACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGGAGTCCTGTACCCGTCGGCTCACAGCTaGTGGAGAAGAATTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DNDHQTHSQEGLLRGVLYPSAHS*WRRISV Trigger: AACAGAAATTCTTCTCCAGCAGCTGTGAGCCGACGG...GTACAGGACTCCTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR CCA 90 bp | CATAGCCAAGAAGGACTTTTGCGAGGAGTCCTGTACGGGTGCAGGACTTTAAGGACGGCTTATCAGGTTTaGGCTTCTCATCCTCGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HSQEGLLRGVLYGCRTLRTAYQV*ASHPRF Trigger: AAAGCGAGGATGAGAAGCCCAAACCTGATAAGCCGT...CCTTAAAGTCCTGCACCCGTACAGGACTCCTCGCAAAAGTCCTTCTTGGCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR CCA 90 bp | AGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGGAGATGAGGTTGGAGGTGTaGATGACAACTCGGAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: RTLTMTTRHIAKKDFCEEMRLEV*MTTRRP Trigger: AGGCCTCCGAGTTGTCATCCACACCTCCAACCTCAT...CTCCTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR TCA 90 bp | TTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTGCCCAGCCTGGGGGTaGGAGGATGCTGACGGCTTA | + |
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Preference number: 4 (lower is better) Translates to: FFNKNVDNDHQTHSQEGLCPAWG*EDADGL Trigger: TAAGCCGTCAGCATCCTCTCACCCCCAGGCTGGGCA...AAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR TCA 90 bp | AAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGGACTGAGCAGGTGTATATaGGCTCCTTCGACACTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KNVDNDHQTHSQEGLLRGLSRCI*APSTLP Trigger: AGGGAGTGTCGAAGGAGCTCATATACACCTGCTCAG...TCCTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR GCA 90 bp | ACCTCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGCTGGTCATCATCGCTaGTGGAGAGACACCAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TSSLIRTLTMTTRHIAKKAGHHR*WRDTSR Trigger: TCGGCTGGTGTCTCTCCAGCAGCGATGATGACCAGC...CTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR GCA 90 bp | TTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCAGGGCACCCACATGTTaGCGTGCGTGTCAGGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LIRTLTMTTRHIAKKDFCRAPTC*RACQVL Trigger: AAGCACCTGACACGCACGGCAACATGTGGGTGCCCT...GCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR CCA 90 bp | AGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGGAGCATGTAAGTCTGCCTTaGCTTCCCTCTTATCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: RTLTMTTRHIAKKDFCEEHVSLP*LPSYHR Trigger: ACGGTGATAAGAGGGAAGCCAAGGCAGACTTACATG...CTCCTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR TCA 90 bp | AAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGGAGTGGATATTGCTTTATaGGCCAGTCCACGTCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: KNVDNDHQTHSQEGLLRGVDIAL*ASPRQS Trigger: GCTTTGACGTGGACTGGCTCATAAAGCAATATCCAC...TCCTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR TCA 90 bp | ATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGACAGATTCGCACTTGTaGCCAGGAACCAAGCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: IRTLTMTTRHIAKKDFCETDSHL*PGTKPV Trigger: AACTGGCTTGGTTCCTGGTCACAAGTGCGAATCTGT...CTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR GCA 90 bp | ACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGGAGTCCTGCAATATCCAACTTTaGCTGGCAGAGGGAAATGTT | + |
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Preference number: 4 (lower is better) Translates to: TLTMTTRHIAKKDFCEESCNIQL*LAEGNV Trigger: AACATTTCCCTCTGCCAGGCAAAGTTGGATATTGCA...GGACTCCTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR GCA 90 bp | ATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGCCGTCGGCTCACAGCTaGTGGAGAAGAATTTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: IRTLTMTTRHIAKKDFCEPSAHS*WRRISV Trigger: AACAGAAATTCTTCTCCAGCAGCTGTGAGCCGACGG...CTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR GCA 90 bp | TTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTAGGGCACCCACATGTTaGCGTGCGTGTCAGGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: FFNKNVDNDHQTHSQEGLRAPTC*RACQVL Trigger: AAGCACCTGACACGCACGGCAACATGTGGGTGCCCT...AAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR CCA 90 bp | CATAGCCAAGAAGGACTTTTGCGAGGAGTCCTGTACGGGTGCAGGACTTTAAGGAAAATATCCTTGATGTaGAGGGCTTTGGAGTTGTAC | + |
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Preference number: 4 (lower is better) Translates to: HSQEGLLRGVLYGCRTLRKISLM*RALELY Trigger: GTACAACTCCAAAGCCCTCCACATCAAGGATATTTT...CCTTAAAGTCCTGCACCCGTACAGGACTCCTCGCAAAAGTCCTTCTTGGCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR CCA 90 bp | ATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGCAGTTTACTGAAGTCTaGCGAGGGCCTCATGTACGT | + |
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Preference number: 4 (lower is better) Translates to: IRTLTMTTRHIAKKDFCEQFTEV*RGPHVR Trigger: ACGTACATGAGGCCCTCGCCAGACTTCAGTAAACTG...CTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR TCA 90 bp | TTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGGGTTGGAGGTGTGGATaGCAACTCGGAGGCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: FNKNVDNDHQTHSQEGLLGWRCG*QLGGLL Trigger: AAGAAGGCCTCCGAGTTGTCATCCACACCTCCAACC...CAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR GCA 90 bp | TTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGGGTGTGGACGGGGCATaGGCTTGCAGAAGCTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: FNKNVDNDHQTHSQEGLLGVDGA*ACRSFL Trigger: TAGAAAGCTTCTGCAAGCGCATGCCCCGTCCACACC...CAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR GCA 90 bp | TCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTCAGCCGTCTGGATaGTATAGGGAAGAGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: SSLIRTLTMTTRHIAKKDFQPSG*YREESP Trigger: GGGGCTCTCTTCCCTATAGCATCCAGACGGCTGAAA...GTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR GCA 90 bp | TCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACACCCACATGTTGCCGTaGGTGTCAGGTGCTTTGACA | + |
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Preference number: 4 (lower is better) Translates to: SSLIRTLTMTTRHIAKKDTHMLP*VSGALT Trigger: TGTCAAAGCACCTGACACGCACGGCAACATGTGGGT...GTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR CCA 90 bp | ATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGCGCTTTCGTCACTACTaGATATTGTCCACTTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: IRTLTMTTRHIAKKDFCERFRHY*ILSTSR Trigger: ACGGGAAGTGGACAATATCCAGTAGTGACGAAAGCG...CTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR CCA 90 bp | TCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACCTGCTGTGTCACATCTaGCTGCTGGTCATCATCGCT | + |
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Preference number: 4 (lower is better) Translates to: SSLIRTLTMTTRHIAKKDLLCHI*LLVIIA Trigger: AGCGATGATGACCAGCAGCCAGATGTGACACAGCAG...GTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR CCA 90 bp | ATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGCATGTAAGTCTGCCTTaGCTTCCCTCTTATCACCGT | + |
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Preference number: 4 (lower is better) Translates to: IRTLTMTTRHIAKKDFCEHVSLP*LPSYHR Trigger: ACGGTGATAAGAGGGAAGCCAAGGCAGACTTACATG...CTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR CCA 90 bp | CACCTCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAATGAGGTTGGAGGTGTaGATGACAACTCGGAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: HLFFNKNVDNDHQTHSQEMRLEV*MTTRRP Trigger: AGGCCTCCGAGTTGTCATCCACACCTCCAACCTCAT...TTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGAGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR GCA 90 bp | ATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGGTCTCAGAGAGGTCATaGTCTTGGATGATGTCTATC | + |
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Preference number: 4 (lower is better) Translates to: IRTLTMTTRHIAKKDFCEVSERS*SWMMSI Trigger: GATAGACATCATCCAAGAGCATGACCTCTCTGAGAC...CTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR CCA 90 bp | TCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACCAGTTTACTGAAGTCTaGCGAGGGCCTCATGTACGT | + |
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Preference number: 4 (lower is better) Translates to: SSLIRTLTMTTRHIAKKDQFTEV*RGPHVR Trigger: ACGTACATGAGGCCCTCGCCAGACTTCAGTAAACTG...GTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR GCA 90 bp | TTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGCCGTGCGTGTCAGGTaGTTTGACATAAGGAATGTT | + |
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Preference number: 4 (lower is better) Translates to: LIRTLTMTTRHIAKKDFCAVRVR*FDIRNV Trigger: AACATTCCTTATGTCAAAGCACCTGACACGCACGGC...GCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR CCA 90 bp | TCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACGGTATCCTTCTAAGCTaGTCCGCACATTTTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: SSLIRTLTMTTRHIAKKDGILLS*SAHFPQ Trigger: CTGTGGAAAATGTGCGGACCAGCTTAGAAGGATACC...GTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR TCA 90 bp | TTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCATTTCTGTTTCACTTTaGAGGTGTCCAGGCCAAACG | + |
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Preference number: 4 (lower is better) Translates to: LIRTLTMTTRHIAKKDFCISVSL*RCPGQT Trigger: CGTTTGGCCTGGACACCTTCAAAGTGAAACAGAAAT...GCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR TCA 90 bp | ACCTCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGCGTGTCAGGTGCTTTaGCATAAGGAATGTTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: TSSLIRTLTMTTRHIAKKACQVL*HKECSK Trigger: TTTGGAACATTCCTTATGTCAAAGCACCTGACACGC...CTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR GCA 90 bp | CACCTCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAAATTCCGGTGGATATTaGTTTATGAGCCAGTCCACG | + |
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Preference number: 4 (lower is better) Translates to: HLFFNKNVDNDHQTHSQENSGGY*FMSQST Trigger: CGTGGACTGGCTCATAAAGCAATATCCACCGGAATT...TTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR GCA 90 bp | TTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGTCTCAGAGAGGTCATaGTCTTGGATGATGTCTATC | + |
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Preference number: 4 (lower is better) Translates to: LIRTLTMTTRHIAKKDFCVSERS*SWMMSI Trigger: GATAGACATCATCCAAGAGCATGACCTCTCTGAGAC...GCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR GCA 90 bp | GAAAATAACACCTCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATATTTCAGCCGTCTGGATaGTATAGGGAAGAGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ENNTSSLIRTLTMTTRHIFQPSG*YREESP Trigger: GGGGCTCTCTTCCCTATAGCATCCAGACGGCTGAAA...TATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGAGGTGTTATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR GCA 90 bp | GAAAATAACACCTCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAACCCACATGTTGCCGTaGGTGTCAGGTGCTTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: ENNTSSLIRTLTMTTRHITHMLP*VSGALT Trigger: TGTCAAAGCACCTGACACGCACGGCAACATGTGGGT...TATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGAGGTGTTATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTCGCTTTCGTCACTACTaGATATTGTCCACTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: FFNKNVDNDHQTHSQEGLRFRHY*ILSTSR Trigger: ACGGGAAGTGGACAATATCCAGTAGTGACGAAAGCG...AAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTACGGCTTATCAGGTTTaGGCTTCTCATCCTCGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FFNKNVDNDHQTHSQEGLTAYQV*ASHPRF Trigger: AAAGCGAGGATGAGAAGCCCAAACCTGATAAGCCGT...AAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTGGTATCCTTCTAAGCTaGTCCGCACATTTTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FFNKNVDNDHQTHSQEGLGILLS*SAHFPQ Trigger: CTGTGGAAAATGTGCGGACCAGCTTAGAAGGATACC...AAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CCA 90 bp | ACCTCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGTCGGCTCACAGCTGCTaGAGAAGAATTTCTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TSSLIRTLTMTTRHIAKKSAHSC*RRISVS Trigger: TGAAACAGAAATTCTTCTCCAGCAGCTGTGAGCCGA...CTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR GCA 90 bp | TTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGAATTCCGGTGGATATTaGTTTATGAGCCAGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: FNKNVDNDHQTHSQEGLLNSGGY*FMSQST Trigger: CGTGGACTGGCTCATAAAGCAATATCCACCGGAATT...CAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACGTGGTGTGTTCCAAATaGAATATCCAACTTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLIRTLTMTTRHIAKKDVVCSK*NIQLCL Trigger: CAGGCAAAGTTGGATATTGCATTTGGAACACACCAC...GTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR GCA 90 bp | CACCTCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGTGGTGTGTTCCAAATaGAATATCCAACTTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HLFFNKNVDNDHQTHSQEVVCSK*NIQLCL Trigger: CAGGCAAAGTTGGATATTGCATTTGGAACACACCAC...TTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGAGGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR GCA 90 bp | GAAAATAACACCTCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCGTGCGTGTCAGGTaGTTTGACATAAGGAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: ENNTSSLIRTLTMTTRHIAVRVR*FDIRNV Trigger: AACATTCCTTATGTCAAAGCACCTGACACGCACGGC...TATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGAGGTGTTATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACAAAATATCCTTGATGTaGAGGGCTTTGGAGTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLIRTLTMTTRHIAKKDKISLM*RALELY Trigger: GTACAACTCCAAAGCCCTCCACATCAAGGATATTTT...GTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CCA 90 bp | TTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCAGCATCATTTTCGTGTaGTGTGTTCCAAATGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: LIRTLTMTTRHIAKKDFCSIIFV*CVPNAI Trigger: TATTGCATTTGGAACACACCACACGAAAATGATGCT...GCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTAGCATCATTTTCGTGTaGTGTGTTCCAAATGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: FFNKNVDNDHQTHSQEGLSIIFV*CVPNAI Trigger: TATTGCATTTGGAACACACCACACGAAAATGATGCT...AAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CCA 90 bp | GGCAGCACTCTCTTAGGCTGTTCCTGCTGTGTCACATCTGGCTGCTaGTCATCATCGCTGCTGGAGAGACACCAGCCGAGACCTTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GSTLLGCSCCVTSGC*SSSLLERHQPRPSG Trigger: CCCGGAAGGTCTCGGCTGGTGTCTCTCCAGCAGCGATGATGACCAGCAGCCAGATGTGACACAGCAGGAACAGCCTAAGAGAGTGCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CAA 90 bp | CATAGCCAAGAAGGACTTTTGCGAGGAGTCCTGTACGGGTGCAGGACTTTAAGGGGCCAGCACTCGCCCTaGGGTGTGGACGGGGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: HSQEGLLRGVLYGCRTLRGQHSP*GVDGAC Trigger: GCATGCCCCGTCCACACCCAAGGGCGAGTGCTGGCC...CCTTAAAGTCCTGCACCCGTACAGGACTCCTCGCAAAAGTCCTTCTTGGCTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS TCA 90 bp | GAGCTCCTTCGACACTCCCTGCCCAGCCTGGGGGTGAGAGGATGCTaGCGGCTTATCAGGTTTGGGCTTCTCATCCTCGCTTTCGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: ELLRHSLPSLGVRGC*RLIRFGLLILAFVT Trigger: AGTGACGAAAGCGAGGATGAGAAGCCCAAACCTGATAAGCCGTCAGCATCCTCTCACCCCCAGGCTGGGCAGGGAGTGTCGAAGGAGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021594.5 ENSMUST00000137653.2 ENSMUST00000153627.8 |
||
| CDS TCA 90 bp | TCTGTCTCTTGTGTGCAACCTTGCGGGCCTCTGAGCAGGTGTATATaGGCTCCTTCGACACTCCCTGCCCAGCCTGGGGGTGAGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SVSCVQPCGPLSRCI*APSTLPAQPGGERM Trigger: CATCCTCTCACCCCCAGGCTGGGCAGGGAGTGTCGAAGGAGCTCATATACACCTGCTCAGAGGCCCGCAAGGTTGCACACAAGAGACAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS GCA 90 bp | GAGCTCGTAGGAGCGTATCATCAGCTGGGTGCCGTTCTTCTCCAGTaGCCCCCAGGCAGCCTTGGACAGATTCGCACTTGTGACCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ELVGAYHQLGAVLLQ*PPGSLGQIRTCDQE Trigger: TTCCTGGTCACAAGTGCGAATCTGTCCAAGGCTGCCTGGGGGGCACTGGAGAAGAACGGCACCCAGCTGATGATACGCTCCTACGAGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CCA 90 bp | GCTGTTCCTGCTGTGTCACATCTGGCTGCTGGTCATCATCGCTGCTaGAGAGACACCAGCCGAGACCTTCCGGGGAGTCACTCTTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AVPAVSHLAAGHHRC*RDTSRDLPGSHSSA Trigger: AGCAGAAGAGTGACTCCCCGGAAGGTCTCGGCTGGTGTCTCTCCAGCAGCGATGATGACCAGCAGCCAGATGTGACACAGCAGGAACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CAA 90 bp | GACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGGAGTCCTGTACGGCCAGCACTCGCCCTaGGGTGTGGACGGGGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: DNDHQTHSQEGLLRGVLYGQHSP*GVDGAC Trigger: GCATGCCCCGTCCACACCCAAGGGCGAGTGCTGGCC...GTACAGGACTCCTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS TCA 90 bp | CAGGTGTATATGAGCTCCTTCGACACTCCCTGCCCAGCCTGGGGGTaGGAGGATGCTGACGGCTTATCAGGTTTGGGCTTCTCATCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: QVYMSSFDTPCPAWG*EDADGLSGLGFSSS Trigger: CGAGGATGAGAAGCCCAAACCTGATAAGCCGTCAGCATCCTCTCACCCCCAGGCTGGGCAGGGAGTGTCGAAGGAGCTCATATACACCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021594.5 ENSMUST00000137653.2 ENSMUST00000153627.8 |
||
| CDS GCA 90 bp | CTGCTGGAGAGACACCAGCCGAGACCTTCCGGGGAGTCACTCTTCTaGTTCTTGTGGGGTAGCACCGAGTCTGCGTCGTTGAACTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LLERHQPRPSGESLF*FLWGSTESASLNFT Trigger: TGTGAAGTTCAACGACGCAGACTCGGTGCTACCCCACAAGAAGCAGAAGAGTGACTCCCCGGAAGGTCTCGGCTGGTGTCTCTCCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CCA 90 bp | CTCTTGAGGCAGCACTCTCTTAGGCTGTTCCTGCTGTGTCACATCTaGCTGCTGGTCATCATCGCTGCTGGAGAGACACCAGCCGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: LLRQHSLRLFLLCHI*LLVIIAAGETPAET Trigger: GGTCTCGGCTGGTGTCTCTCCAGCAGCGATGATGACCAGCAGCCAGATGTGACACAGCAGGAACAGCCTAAGAGAGTGCTGCCTCAAGAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CCA 90 bp | ATGTCCTGGCCTTCCCCTGAGGTCTCGTACTCATCGTCTGCCCTTTaGGGCCTAAGGCTGGCAGGAGGGCTTCTATCCACAACTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: MSWPSPEVSYSSSAL*GLRLAGGLLSTTFW Trigger: CCAGAAAGTTGTGGATAGAAGCCCTCCTGCCAGCCTTAGGCCCCAAAGGGCAGACGATGAGTACGAGACCTCAGGGGAAGGCCAGGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS TCA 90 bp | AGGCCGTCGGCTCACAGCTGCTGGAGAAGAATTTCTGTTTCACTTTaGAGGTGTCCAGGCCAAACGCAGACGGGAGGAAGAGGACCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: RPSAHSCWRRISVSL*RCPGQTQTGGRGPR Trigger: TCGGGGTCCTCTTCCTCCCGTCTGCGTTTGGCCTGGACACCTTCAAAGTGAAACAGAAATTCTTCTCCAGCAGCTGTGAGCCGACGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CCA 90 bp | AGACACCAGCCGAGACCTTCCGGGGAGTCACTCTTCTGCTTCTTGTaGGGTAGCACCGAGTCTGCGTCGTTGAACTTCACAGGTGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: RHQPRPSGESLFCFL*GSTESASLNFTGEI Trigger: GATCTCACCTGTGAAGTTCAACGACGCAGACTCGGTGCTACCCCACAAGAAGCAGAAGAGTGACTCCCCGGAAGGTCTCGGCTGGTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS GCA 90 bp | AAGAGGAACTGCACTCTTGCCCGGAGGTCGGCCTTCCTCTCTCAGTaGCAGCAAGCTGTCTTTAAACTCCGAGCACAGCCACTTGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: KRNCTLARRSAFLSQ*QQAVFKLRAQPLGF Trigger: GAATCCAAGTGGCTGTGCTCGGAGTTTAAAGACAGCTTGCTGGCACTGAGAGAGGAAGGCCGACCTCCGGGCAAGAGTGCAGTTCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS GCA 90 bp | TGTGGAAGTAGGAGTGCAGCCACCTCTGCTTTTCAGCCGTCTGGATaGTATAGGGAAGAGAGCCCCCAGCAGGGTATCCTTCTAAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CGSRSAATSAFQPSG*YREESPQQGILLSW Trigger: CCAGCTTAGAAGGATACCCTGCTGGGGGCTCTCTTCCCTATAGCATCCAGACGGCTGAAAAGCAGAGGTGGCTGCACTCCTACTTCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CCA 90 bp | GGGAAATGTTCGCATAGGGCTTCGCCTGGGCATGTAAGTCTGCCTTaGCTTCCCTCTTATCACCGTGCACAAGCAGGATCGGGTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GKCSHRASPGHVSLP*LPSYHRAQAGSGSS Trigger: GGAAGAACCCGATCCTGCTTGTGCACGGTGATAAGAGGGAAGCCAAGGCAGACTTACATGCCCAGGCGAAGCCCTATGCGAACATTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CAA 90 bp | ACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGGAGTCCGAGGGCACCCACATGTaGCCGTGCGTGTCAGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TLTMTTRHIAKKDFCEESEGTHM*PCVSGA Trigger: AGCACCTGACACGCACGGCAACATGTGGGTGCCCTC...GGACTCCTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CAA 90 bp | GACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGGAGTCCTGTACCTCTTGTGTGCAACCTaGCGGGCCTCTGAGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DNDHQTHSQEGLLRGVLYLLCAT*RASEQV Trigger: CACCTGCTCAGAGGCCCGCAAGGTTGCACACAAGAG...GTACAGGACTCCTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CAA 90 bp | CATAGCCAAGAAGGACTTTTGCGAGGAGTCCTGTACGGGTGCAGGACTTTAAGGGGTGAGATCTGTCTCTaGTGTGCAACCTTGCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HSQEGLLRGVLYGCRTLRGEICL*CATLRA Trigger: GGCCCGCAAGGTTGCACACAAGAGACAGATCTCACC...CCTTAAAGTCCTGCACCCGTACAGGACTCCTCGCAAAAGTCCTTCTTGGCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS TCA 90 bp | AGTCACTCTTCTGCTTCTTGTGGGGTAGCACCGAGTCTGCGTCGTTaGACTTCACAGGTGAGATCTGTCTCTTGTGTGCAACCTTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SHSSASCGVAPSLRR*TSQVRSVSCVQPCG Trigger: CCCGCAAGGTTGCACACAAGAGACAGATCTCACCTGTGAAGTTCAACGACGCAGACTCGGTGCTACCCCACAAGAAGCAGAAGAGTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS TCA 90 bp | CGTCTTAATGTGTGGCATGGCATTACTTCGGCCGGATGTCTCTGCTaGCCACTTGTGGAAGTAGGAGTGCAGCCACCTCTGCTTTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RLNVWHGITSAGCLC*PLVEVGVQPPLLFS Trigger: GCTGAAAAGCAGAGGTGGCTGCACTCCTACTTCCACAAGTGGTCAGCAGAGACATCCGGCCGAAGTAATGCCATGCCACACATTAAGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS GCA 90 bp | TTCGCCTGGGCATGTAAGTCTGCCTTGGCTTCCCTCTTATCACCGTaGACAAGCAGGATCGGGTTCTTCCTGAATTCCGGTGGATATTGC | + |
|
Preference number: 5 (lower is better) Translates to: FAWACKSALASLLSP*TSRIGFFLNSGGYC Trigger: GCAATATCCACCGGAATTCAGGAAGAACCCGATCCTGCTTGTGCACGGTGATAAGAGGGAAGCCAAGGCAGACTTACATGCCCAGGCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS GCA 90 bp | CATTTTCCACAGAGGGATAGATCAGATGAAGAGGAACTGCACTCTTaGCCGGAGGTCGGCCTTCCTCTCTCAGTGCCAGCAAGCTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HFPQRDRSDEEELHS*PEVGLPLSVPASCL Trigger: AAGACAGCTTGCTGGCACTGAGAGAGGAAGGCCGACCTCCGGGCAAGAGTGCAGTTCCTCTTCATCTGATCTATCCCTCTGTGGAAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CCA 90 bp | CTGGTGAGGTCAGCTTTGAAACGGGTGCTTGACTCTCCAGCTGTGTaGCTTCCCTGGTCAATTCTTGGGTACAAAGGGCTCAACCATATT | + |
|
Preference number: 5 (lower is better) Translates to: LVRSALKRVLDSPAV*LPWSILGYKGLNHI Trigger: AATATGGTTGAGCCCTTTGTACCCAAGAATTGACCAGGGAAGCCACACAGCTGGAGAGTCAAGCACCCGTTTCAAAGCTGACCTCACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CAA 90 bp | ACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGGAGTCCGCATGTAAGTCTGCCTaGGCTTCCCTCTTATCACCG | + |
|
Preference number: 5 (lower is better) Translates to: TLTMTTRHIAKKDFCEESACKSA*ASLLSP Trigger: CGGTGATAAGAGGGAAGCCAAGGCAGACTTACATGC...GGACTCCTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CCA 90 bp | TCAGCTTTGAAACGGGTGCTTGACTCTCCAGCTGTGTGGCTTCCCTaGTCAATTCTTGGGTACAAAGGGCTCAACCATATTCCTTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SALKRVLDSPAVWLP*SILGYKGLNHIPWV Trigger: AACCCAAGGAATATGGTTGAGCCCTTTGTACCCAAGAATTGACCAGGGAAGCCACACAGCTGGAGAGTCAAGCACCCGTTTCAAAGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CCA 90 bp | CAGATTCGCACTTGTGACCAGGAACCAAGCCAGTTTACTGAAGTCTaGCGAGGGCCTCATGTACGTCTTAATGTGTGGCATGGCATTACT | + |
|
Preference number: 5 (lower is better) Translates to: QIRTCDQEPSQFTEV*RGPHVRLNVWHGIT Trigger: AGTAATGCCATGCCACACATTAAGACGTACATGAGGCCCTCGCCAGACTTCAGTAAACTGGCTTGGTTCCTGGTCACAAGTGCGAATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CAA 90 bp | CACCTCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAACTCTTGTGTGCAACCTaGCGGGCCTCTGAGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: HLFFNKNVDNDHQTHSQELLCAT*RASEQV Trigger: CACCTGCTCAGAGGCCCGCAAGGTTGCACACAAGAG...TTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CAA 90 bp | AGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGGAGGCTCAACCATATTCCTaGGGTTTTCTGGTGCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RTLTMTTRHIAKKDFCEEAQPYS*GFLVPV Trigger: GACTGGCACCAGAAAACCCAAGGAATATGGTTGAGC...CTCCTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CAA 90 bp | TTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGGAGGGCACCCACATGTaGCCGTGCGTGTCAGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FNKNVDNDHQTHSQEGLLEGTHM*PCVSGA Trigger: AGCACCTGACACGCACGGCAACATGTGGGTGCCCTC...CAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTGGTGAGATCTGTCTCTaGTGTGCAACCTTGCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FFNKNVDNDHQTHSQEGLGEICL*CATLRA Trigger: GGCCCGCAAGGTTGCACACAAGAGACAGATCTCACC...AAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CAA 90 bp | ACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGGAGTCCAATTTCTGTTTCACTTaGAAGGTGTCCAGGCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TLTMTTRHIAKKDFCEESNFCFT*KVSRPN Trigger: GTTTGGCCTGGACACCTTCAAAGTGAAACAGAAATT...GGACTCCTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CAA 90 bp | AAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGGATTGATGTGGAGGGCTTaGGAGTTGTACTTTGCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: KNVDNDHQTHSQEGLLRGLMWRA*ELYFAL Trigger: TAAGGCAAAGTACAACTCCAAAGCCCTCCACATCAA...TCCTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS-3UTR CAA 90 bp | ATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGGGGGATAAAATATCCTaGATGTGGAGGGCTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: IRTLTMTTRHIAKKDFCEGDKIS*MWRALE Trigger: CTCCAAAGCCCTCCACATCAAGGATATTTTATCCCC...CTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTGCATGTAAGTCTGCCTaGGCTTCCCTCTTATCACCG | + |
|
Preference number: 5 (lower is better) Translates to: FFNKNVDNDHQTHSQEGLACKSA*ASLLSP Trigger: CGGTGATAAGAGGGAAGCCAAGGCAGACTTACATGC...AAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CAA 90 bp | ATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCGAGATGCAATATCCAACTTaGCCTGGCAGAGGGAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: IRTLTMTTRHIAKKDFCEMQYPT*PGRGKC Trigger: ACATTTCCCTCTGCCAGGCAAAGTTGGATATTGCAT...CTCGCAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CAA 90 bp | CACCTCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGCTCAACCATATTCCTaGGGTTTTCTGGTGCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: HLFFNKNVDNDHQTHSQEAQPYS*GFLVPV Trigger: GACTGGCACCAGAAAACCCAAGGAATATGGTTGAGC...TTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTCTGGTGAGGTCAGCTTaGAAACGGGTGCTTGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: FFNKNVDNDHQTHSQEGLLVRSA*KRVLDS Trigger: AGAGTCAAGCACCCGTTTCAAAGCTGACCTCACCAG...AAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CAA 90 bp | TTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGACTTTTGCTGGTGAGGTCAGCTTaGAAACGGGTGCTTGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: FNKNVDNDHQTHSQEGLLLVRSA*KRVLDS Trigger: AGAGTCAAGCACCCGTTTCAAAGCTGACCTCACCAG...CAAAAGTCCTTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CAA 90 bp | CACCTCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAGGGGATAAAATATCCTaGATGTGGAGGGCTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HLFFNKNVDNDHQTHSQEGDKIS*MWRALE Trigger: CTCCAAAGCCCTCCACATCAAGGATATTTTATCCCC...TTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGAGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CAA 90 bp | CACCTCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAATGCAATATCCAACTTaGCCTGGCAGAGGGAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: HLFFNKNVDNDHQTHSQEMQYPT*PGRGKC Trigger: ACATTTCCCTCTGCCAGGCAAAGTTGGATATTGCAT...TTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGAGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS-3UTR CAA 90 bp | CACCTCTTCTTTAATAAGAACGTTGACAATGACCACCAGACACATAGCCAAGAAAATTTCTGTTTCACTTaGAAGGTGTCCAGGCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: HLFFNKNVDNDHQTHSQENFCFT*KVSRPN Trigger: GTTTGGCCTGGACACCTTCAAAGTGAAACAGAAATT...TTCTTGGCTATGTGTCTGGTGGTCATTGTCAACGTTCTTATTAAAGAAGAGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS TCA 72 bp | TGTGTGCAACCTTGCGGGCCTCTGAGCAGGTGTATATaGGCTCCTTCGACACTCCCTGCCCAGCCTGGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: CVQPCGPLSRCI*APSTLPAQPGG Trigger: ACCCCCAGGCTGGGCAGGGAGTGTCGAAGGAGCTCATATACACCTGCTCAGAGGCCCGCAAGGTTGCACACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS TCA 72 bp | CCACTTGGATTCATCGGGCCCCAGGGAGCCGATGCTTaGGAACTGACCCACGATAGGCCAGCACTCGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PLGFIGPQGADA*ELTHDRPALAL Trigger: AAGGGCGAGTGCTGGCCTATCGTGGGTCAGTTCTCAAGCATCGGCTCCCTGGGGCCCGATGAATCCAAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS GCA 72 bp | CCTGCTGTGTCACATCTGGCTGCTGGTCATCATCGCTaGTGGAGAGACACCAGCCGAGACCTTCCGGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: PAVSHLAAGHHR*WRDTSRDLPGS Trigger: ACTCCCCGGAAGGTCTCGGCTGGTGTCTCTCCAGCAGCGATGATGACCAGCAGCCAGATGTGACACAGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CAA 90 bp | GAGAGACACCAGCCGAGACCTTCCGGGGAGTCACTCTTCTGCTTCTaGTGGGGTAGCACCGAGTCTGCGTCGTTGAACTTCACAGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ERHQPRPSGESLFCF*WGSTESASLNFTGE Trigger: CTCACCTGTGAAGTTCAACGACGCAGACTCGGTGCTACCCCACAAGAAGCAGAAGAGTGACTCCCCGGAAGGTCTCGGCTGGTGTCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CAA 90 bp | GAGGCCGTCGGCTCACAGCTGCTGGAGAAGAATTTCTGTTTCACTTaGAAGGTGTCCAGGCCAAACGCAGACGGGAGGAAGAGGACCCCG | + |
|
Preference number: 6 (lower is better) Translates to: EAVGSQLLEKNFCFT*KVSRPNADGRKRTP Trigger: CGGGGTCCTCTTCCTCCCGTCTGCGTTTGGCCTGGACACCTTCAAAGTGAAACAGAAATTCTTCTCCAGCAGCTGTGAGCCGACGGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CAA 72 bp | CAGCCGAGACCTTCCGGGGAGTCACTCTTCTGCTTCTaGTGGGGTAGCACCGAGTCTGCGTCGTTGAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: QPRPSGESLFCF*WGSTESASLNF Trigger: GAAGTTCAACGACGCAGACTCGGTGCTACCCCACAAGAAGCAGAAGAGTGACTCCCCGGAAGGTCTCGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS TCA 72 bp | GTGTGGCATGGCATTACTTCGGCCGGATGTCTCTGCTaGCCACTTGTGGAAGTAGGAGTGCAGCCACCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VWHGITSAGCLC*PLVEVGVQPPL Trigger: CAGAGGTGGCTGCACTCCTACTTCCACAAGTGGTCAGCAGAGACATCCGGCCGAAGTAATGCCATGCCACAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS GCA 72 bp | ACTCTCTTAGGCTGTTCCTGCTGTGTCACATCTGGCTaGTGGTCATCATCGCTGCTGGAGAGACACCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: TLLGCSCCVTSG*WSSSLLERHQP Trigger: CGGCTGGTGTCTCTCCAGCAGCGATGATGACCAGCAGCCAGATGTGACACAGCAGGAACAGCCTAAGAGAGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS GCA 72 bp | ATAGGCCAGCACTCGCCCTTGGGTGTGGACGGGGCATaGGCTTGCAGAAGCTTTCTAAGCCTAAAATGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: IGQHSPLGVDGA*ACRSFLSLKCP Trigger: GGGACATTTTAGGCTTAGAAAGCTTCTGCAAGCGCATGCCCCGTCCACACCCAAGGGCGAGTGCTGGCCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS GCA 72 bp | CAGAGGGATAGATCAGATGAAGAGGAACTGCACTCTTaGCCGGAGGTCGGCCTTCCTCTCTCAGTGCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QRDRSDEEELHS*PEVGLPLSVPA Trigger: TGCTGGCACTGAGAGAGGAAGGCCGACCTCCGGGCAAGAGTGCAGTTCCTCTTCATCTGATCTATCCCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CCA 72 bp | CCGAGACCTTCCGGGGAGTCACTCTTCTGCTTCTTGTaGGGTAGCACCGAGTCTGCGTCGTTGAACTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: PRPSGESLFCFL*GSTESASLNFT Trigger: TGTGAAGTTCAACGACGCAGACTCGGTGCTACCCCACAAGAAGCAGAAGAGTGACTCCCCGGAAGGTCTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CCA 72 bp | TCGCATAGGGCTTCGCCTGGGCATGTAAGTCTGCCTTaGCTTCCCTCTTATCACCGTGCACAAGCAGGATCG | + |
|
Preference number: 6 (lower is better) Translates to: SHRASPGHVSLP*LPSYHRAQAGS Trigger: CGATCCTGCTTGTGCACGGTGATAAGAGGGAAGCCAAGGCAGACTTACATGCCCAGGCGAAGCCCTATGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS CAA 90 bp | GCGTCGTTGAACTTCACAGGTGAGATCTGTCTCTTGTGTGCAACCTaGCGGGCCTCTGAGCAGGTGTATATGAGCTCCTTCGACACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: ASLNFTGEICLLCAT*RASEQVYMSSFDTP Trigger: GGGAGTGTCGAAGGAGCTCATATACACCTGCTCAGAGGCCCGCAAGGTTGCACACAAGAGACAGATCTCACCTGTGAAGTTCAACGACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
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| CDS CAA 90 bp | AGCACCGAGTCTGCGTCGTTGAACTTCACAGGTGAGATCTGTCTCTaGTGTGCAACCTTGCGGGCCTCTGAGCAGGTGTATATGAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: STESASLNFTGEICL*CATLRASEQVYMSS Trigger: GGAGCTCATATACACCTGCTCAGAGGCCCGCAAGGTTGCACACAAGAGACAGATCTCACCTGTGAAGTTCAACGACGCAGACTCGGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS GCA 72 bp | TCAGGAGGGCACCCACATGTTGCCGTGCGTGTCAGGTaGTTTGACATAAGGAATGTTCCAAATCCAAGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SGGHPHVAVRVR*FDIRNVPNPRP Trigger: CGGCCTTGGATTTGGAACATTCCTTATGTCAAAGCACCTGACACGCACGGCAACATGTGGGTGCCCTCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CAA 90 bp | GAGTCACTCTTCTGCTTCTTGTGGGGTAGCACCGAGTCTGCGTCGTaGAACTTCACAGGTGAGATCTGTCTCTTGTGTGCAACCTTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: ESLFCFLWGSTESAS*NFTGEICLLCATLR Trigger: CCGCAAGGTTGCACACAAGAGACAGATCTCACCTGTGAAGTTCAACGACGCAGACTCGGTGCTACCCCACAAGAAGCAGAAGAGTGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS GCA 72 bp | GCATGTAAGTCTGCCTTGGCTTCCCTCTTATCACCGTaGACAAGCAGGATCGGGTTCTTCCTGAATTCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: ACKSALASLLSP*TSRIGFFLNSG Trigger: ACCGGAATTCAGGAAGAACCCGATCCTGCTTGTGCACGGTGATAAGAGGGAAGCCAAGGCAGACTTACATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CAA 90 bp | AACGGGTGCTTGACTCTCCAGCTGTGTGGCTTCCCTGGTCAATTCTaGGGTACAAAGGGCTCAACCATATTCCTTGGGTTTTCTGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: NGCLTLQLCGFPGQF*GTKGSTIFLGFSGA Trigger: GGCACCAGAAAACCCAAGGAATATGGTTGAGCCCTTTGTACCCAAGAATTGACCAGGGAAGCCACACAGCTGGAGAGTCAAGCACCCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS TCA 72 bp | TCTGCTTCTTGTGGGGTAGCACCGAGTCTGCGTCGTTaGACTTCACAGGTGAGATCTGTCTCTTGTGTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SASCGVAPSLRR*TSQVRSVSCVQ Trigger: TTGCACACAAGAGACAGATCTCACCTGTGAAGTTCAACGACGCAGACTCGGTGCTACCCCACAAGAAGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS TCA 72 bp | GCTCACAGCTGCTGGAGAAGAATTTCTGTTTCACTTTaGAGGTGTCCAGGCCAAACGCAGACGGGAGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: AHSCWRRISVSL*RCPGQTQTGGR Trigger: TCTTCCTCCCGTCTGCGTTTGGCCTGGACACCTTCAAAGTGAAACAGAAATTCTTCTCCAGCAGCTGTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CCA 72 bp | CAGGTTTGGGCTTCTCATCCTCGCTTTCGTCACTACTaGATATTGTCCACTTCCCGTAGCTGCTTTCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: QVWASHPRFRHY*ILSTSRSCFLG Trigger: CCCAAGAAAGCAGCTACGGGAAGTGGACAATATCCAGTAGTGACGAAAGCGAGGATGAGAAGCCCAAACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021594.5 ENSMUST00000137653.2 ENSMUST00000153627.8 |
||
| CDS CAA 72 bp | AACTTCACAGGTGAGATCTGTCTCTTGTGTGCAACCTaGCGGGCCTCTGAGCAGGTGTATATGAGCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: NFTGEICLLCAT*RASEQVYMSSF Trigger: GAAGGAGCTCATATACACCTGCTCAGAGGCCCGCAAGGTTGCACACAAGAGACAGATCTCACCTGTGAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CAA 72 bp | TTCTGCTTCTTGTGGGGTAGCACCGAGTCTGCGTCGTaGAACTTCACAGGTGAGATCTGTCTCTTGTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: FCFLWGSTESAS*NFTGEICLLCA Trigger: TGCACACAAGAGACAGATCTCACCTGTGAAGTTCAACGACGCAGACTCGGTGCTACCCCACAAGAAGCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS TCA 72 bp | GGTAAACATTGGTCTCAGAGAGGTCATGCTCTTGGATaGTGTCTATCCACTCCTGCAGAGGGGGAGCGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: GKHWSQRGHALG*CLSTPAEGERY Trigger: ATAACGCTCCCCCTCTGCAGGAGTGGATAGACATCATCCAAGAGCATGACCTCTCTGAGACCAATGTTTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CCA 72 bp | AAACGGGTGCTTGACTCTCCAGCTGTGTGGCTTCCCTaGTCAATTCTTGGGTACAAAGGGCTCAACCATATT | + |
|
Preference number: 6 (lower is better) Translates to: KRVLDSPAVWLP*SILGYKGLNHI Trigger: AATATGGTTGAGCCCTTTGTACCCAAGAATTGACCAGGGAAGCCACACAGCTGGAGAGTCAAGCACCCGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CCA 72 bp | ACTTGTGACCAGGAACCAAGCCAGTTTACTGAAGTCTaGCGAGGGCCTCATGTACGTCTTAATGTGTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: TCDQEPSQFTEV*RGPHVRLNVWH Trigger: ATGCCACACATTAAGACGTACATGAGGCCCTCGCCAGACTTCAGTAAACTGGCTTGGTTCCTGGTCACAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CAA 90 bp | AGAGCATCATTTTCGTGTGGTGTGTTCCAAATGCAATATCCAACTTaGCCTGGCAGAGGGAAATGTTCGCATAGGGCTTCGCCTGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RASFSCGVFQMQYPT*PGRGKCSHRASPGH Trigger: ATGCCCAGGCGAAGCCCTATGCGAACATTTCCCTCTGCCAGGCAAAGTTGGATATTGCATTTGGAACACACCACACGAAAATGATGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CAA 72 bp | TTGACTCTCCAGCTGTGTGGCTTCCCTGGTCAATTCTaGGGTACAAAGGGCTCAACCATATTCCTTGGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LTLQLCGFPGQF*GTKGSTIFLGF Trigger: AAACCCAAGGAATATGGTTGAGCCCTTTGTACCCAAGAATTGACCAGGGAAGCCACACAGCTGGAGAGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CAA 72 bp | AAGCAGGATCGGGTTCTTCCTGAATTCCGGTGGATATaGCTTTATGAGCCAGTCCACGTCAAAGCAGTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: KQDRVLPEFRWI*LYEPVHVKAVV Trigger: AACTACTGCTTTGACGTGGACTGGCTCATAAAGCAATATCCACCGGAATTCAGGAAGAACCCGATCCTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS CCA 72 bp | AGTGTCCCAAACAGAGGGGATAAAATATCCTTGATGTaGAGGGCTTTGGAGTTGTACTTTGCCTTAATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SVPNRGDKISLM*RALELYFALIP Trigger: GGGGATTAAGGCAAAGTACAACTCCAAAGCCCTCCACATCAAGGATATTTTATCCCCTCTGTTTGGGACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS GCA 72 bp | GAGCAAGAGCATCATTTTCGTGTGGTGTGTTCCAAATaGAATATCCAACTTTGCCTGGCAGAGGGAAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: EQEHHFRVVCSK*NIQLCLAEGNV Trigger: AACATTTCCCTCTGCCAGGCAAAGTTGGATATTGCATTTGGAACACACCACACGAAAATGATGCTCTTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||
| CDS GCA 72 bp | AATATCCTTGATGTGGAGGGCTTTGGAGTTGTACTTTaGCTTAATCCCCGACACTCTAGTGAGATAAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: NILDVEGFGVVL*LNPRHSSEIKL Trigger: CAGTTTTATCTCACTAGAGTGTCGGGGATTAAGGCAAAGTACAACTCCAAAGCCCTCCACATCAAGGATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021594.5 ENSMUST00000153627.8 |
||