Pregenerated sensors for TDH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021953Ensembl transcript IDs: ENSMUST00000022522.15, ENSMUST00000165776.7, ENSMUST00000168488.3, ENSMUST00000168669.8
Found 119 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCAGCTCTCCGCTATGGCCTGTCGGAGGGGATCCACGCAGTAGGTaGTCTGGAAGTCAGGCGCGTGCTTGCGGAGCGCCTGGGCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: ASSPLWPVGGDPRSR*SGSQARACGAPGPA Trigger: AGCTGGCCCAGGCGCTCCGCAAGCACGCGCCTGACTTCCAGATCACCTACTGCGTGGATCCCCTCCGACAGGCCATAGCGGAGAGCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| 3UTR GCA 90 bp | CTGGAAGATCAAAGTCATGCTTCCAGCCCCAGTCCTTCCGAGCATTaGTGTCATCTAGAATCATGGGCCAGCTCTCCGCTATGGCCTGTC | + |
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Preference number: 1 (lower is better) Translates to: LEDQSHASSPSPSEH*CHLESWASSPLWPV Trigger: GACAGGCCATAGCGGAGAGCTGGCCCATGATTCTAGATGACAGCAATGCTCGGAAGGACTGGGGCTGGAAGCATGACTTTGATCTTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| 3UTR CCA 90 bp | TCTGGTGCTGACGCCGTGGAAGTTGAGCATCGTAGCCACCAACTCTaGAAGATCAAAGTCATGCTTCCAGCCCCAGTCCTTCCGAGCATT | + |
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Preference number: 1 (lower is better) Translates to: SGADAVEVEHRSHQL*KIKVMLPAPVLPSI Trigger: AATGCTCGGAAGGACTGGGGCTGGAAGCATGACTTTGATCTTCCAGAGTTGGTGGCTACGATGCTCAACTTCCACGGCGTCAGCACCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| 3UTR GCA 90 bp | TGGAAGTTGAGCATCGTAGCCACCAACTCTGGAAGATCAAAGTCATaGTTCCAGCCCCAGTCCTTCCGAGCATTGCTGTCATCTAGAATC | + |
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Preference number: 1 (lower is better) Translates to: WKLSIVATNSGRSKS*FQPQSFRALLSSRI Trigger: GATTCTAGATGACAGCAATGCTCGGAAGGACTGGGGCTGGAAGCATGACTTTGATCTTCCAGAGTTGGTGGCTACGATGCTCAACTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGTCCCCTGGGAGAGGCTAGAATTCAGTCTGGCTCTCCAACTTAGAGACTGCGTGCGCCCTGCACTTTaGGGACACAGGGGCCGCTCC | + |
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Preference number: 2 (lower is better) Translates to: AVPWERLEFSLALQLRDCVRPAL*GHRGRS Trigger: GGAGCGGCCCCTGTGTCCTCAAAGTGCAGGGCGCAC...GCAGTCTCTAAGTTGGAGAGCCAGACTGAATTCTAGCCTCTCCCAGGGGACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| 3UTR-3UTR GCA 90 bp | AACTCTGGTGCTGACGCCGTGGAAGTTGAGCATCGTAGCCACCAACTCTGGAAGAGTCAGGCGCGTGCTTaGGGAGCGCCTGGGCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: NSGADAVEVEHRSHQLWKSQARA*GAPGPA Trigger: AGCTGGCCCAGGCGCTCCGCAAGCACGCGCCTGACT...CTTCCAGAGTTGGTGGCTACGATGCTCAACTTCCACGGCGTCAGCACCAGAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| 3UTR-3UTR GCA 90 bp | TCCAGCCCCAGTCCTTCCGAGCATTGCTGTCATCTAGAATCATGGGCCAGCTCTAGTCAGGCGCGTGCTTaGGGAGCGCCTGGGCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: SSPSPSEHCCHLESWASSSQARA*GAPGPA Trigger: AGCTGGCCCAGGCGCTCCGCAAGCACGCGCCTGACT...AGAGCTGGCCCATGATTCTAGATGACAGCAATGCTCGGAAGGACTGGGGCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| 3UTR-3UTR TCA 90 bp | GGTGCTGACGCCGTGGAAGTTGAGCATCGTAGCCACCAACTCTGGAAGATCAAAGTGCGCCCTGCACTTTaGGGACACAGGGGCCGCTCC | + |
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Preference number: 2 (lower is better) Translates to: GADAVEVEHRSHQLWKIKVRPAL*GHRGRS Trigger: GGAGCGGCCCCTGTGTCCTCAAAGTGCAGGGCGCAC...TTTGATCTTCCAGAGTTGGTGGCTACGATGCTCAACTTCCACGGCGTCAGCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168669.8 |
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| 3UTR-3UTR GCA 90 bp | ACGCAAGCTGTCCCCTGGGAGAGGCTAGAATTCAGTCTGGCTCTCCAACTTAGAGACTGCCGTGCGCCCTaGACTTTGAGGACACAGGGG | + |
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Preference number: 2 (lower is better) Translates to: TQAVPWERLEFSLALQLRDCRAP*TLRTQG Trigger: CCCCTGTGTCCTCAAAGTGCAGGGCGCACGGCAGTC...TCTAAGTTGGAGAGCCAGACTGAATTCTAGCCTCTCCCAGGGGACAGCTTGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| 3UTR-3UTR GCA 90 bp | CAAAGTCATGCTTCCAGCCCCAGTCCTTCCGAGCATTGCTGTCATCTAGAATCAGACTGCCGTGCGCCCTaGACTTTGAGGACACAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: QSHASSPSPSEHCCHLESDCRAP*TLRTQG Trigger: CCCCTGTGTCCTCAAAGTGCAGGGCGCACGGCAGTC...TGATTCTAGATGACAGCAATGCTCGGAAGGACTGGGGCTGGAAGCATGACTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168669.8 |
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| 3UTR CAA 90 bp | TCTGGAAGATCAAAGTCATGCTTCCAGCCCCAGTCCTTCCGAGCATaGCTGTCATCTAGAATCATGGGCCAGCTCTCCGCTATGGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SGRSKSCFQPQSFRA*LSSRIMGQLSAMAC Trigger: ACAGGCCATAGCGGAGAGCTGGCCCATGATTCTAGATGACAGCAATGCTCGGAAGGACTGGGGCTGGAAGCATGACTTTGATCTTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| 3UTR-3UTR GCA 90 bp | AACTCTGGTGCTGACGCCGTGGAAGTTGAGCATCGTAGCCACCAACTCTGGAAGAGTCCTTCCGAGCATTaGTGTCATCTAGAATCATGG | + |
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Preference number: 2 (lower is better) Translates to: NSGADAVEVEHRSHQLWKSPSEH*CHLESW Trigger: CCATGATTCTAGATGACAGCAATGCTCGGAAGGACT...CTTCCAGAGTTGGTGGCTACGATGCTCAACTTCCACGGCGTCAGCACCAGAGTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTTGGACCAATTTAGGCACAGGACAAAGGCAGTGTGTAAAGGAACTCCAACCACGCAAGCTGTCCCCTaGGAGAGGCTAGAATTCAGT | + |
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Preference number: 2 (lower is better) Translates to: CLDQFRHRTKAVCKGTPTTQAVP*ERLEFS Trigger: ACTGAATTCTAGCCTCTCCCAGGGGACAGCTTGCGT...GGTTGGAGTTCCTTTACACACTGCCTTTGTCCTGTGCCTAAATTGGTCCAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| 3UTR CCA 72 bp | GTGATCTGGAAGTCAGGCGCGTGCTTGCGGAGCGCCTaGGCCAGCTCTTCGGGGGTGAAGCTCATGGCGCTG | + |
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Preference number: 3 (lower is better) Translates to: VIWKSGACLRSA*ASSSGVKLMAL Trigger: CAGCGCCATGAGCTTCACCCCCGAAGAGCTGGCCCAGGCGCTCCGCAAGCACGCGCCTGACTTCCAGATCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| 3UTR-3UTR CAA 90 bp | TCCAGCCCCAGTCCTTCCGAGCATTGCTGTCATCTAGAATCATGGGCCAGCTCTAAGTCAGGCGCGTGCTaGCGGAGCGCCTGGGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSPSPSEHCCHLESWASSKSGAC*RSAWAS Trigger: GCTGGCCCAGGCGCTCCGCAAGCACGCGCCTGACTT...AGAGCTGGCCCATGATTCTAGATGACAGCAATGCTCGGAAGGACTGGGGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| 3UTR-3UTR CAA 90 bp | CCGTGGAAGTTGAGCATCGTAGCCACCAACTCTGGAAGATCAAAGTCATGCTTCAAGTCAGGCGCGTGCTaGCGGAGCGCCTGGGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PWKLSIVATNSGRSKSCFKSGAC*RSAWAS Trigger: GCTGGCCCAGGCGCTCCGCAAGCACGCGCCTGACTT...GAAGCATGACTTTGATCTTCCAGAGTTGGTGGCTACGATGCTCAACTTCCACGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| 3UTR GCA 72 bp | AGGCTAGAATTCAGTCTGGCTCTCCAACTTAGAGACTaGCGTGCGCCCTGCACTTTGAGGACACAGGGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: RLEFSLALQLRD*RAPCTLRTQGP Trigger: CGGCCCCTGTGTCCTCAAAGTGCAGGGCGCACGGCAGTCTCTAAGTTGGAGAGCCAGACTGAATTCTAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| 3UTR GCA 72 bp | CAAAGTCATGCTTCCAGCCCCAGTCCTTCCGAGCATTaGTGTCATCTAGAATCATGGGCCAGCTCTCCGCTA | + |
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Preference number: 3 (lower is better) Translates to: QSHASSPSPSEH*CHLESWASSPL Trigger: TAGCGGAGAGCTGGCCCATGATTCTAGATGACAGCAATGCTCGGAAGGACTGGGGCTGGAAGCATGACTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| 3UTR CCA 72 bp | GACGCCGTGGAAGTTGAGCATCGTAGCCACCAACTCTaGAAGATCAAAGTCATGCTTCCAGCCCCAGTCCTT | + |
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Preference number: 3 (lower is better) Translates to: DAVEVEHRSHQL*KIKVMLPAPVL Trigger: AAGGACTGGGGCTGGAAGCATGACTTTGATCTTCCAGAGTTGGTGGCTACGATGCTCAACTTCCACGGCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| 3UTR-3UTR CAA 90 bp | GCAACTCTGGTGCTGACGCCGTGGAAGTTGAGCATCGTAGCCACCAACTCTGGACAGTCCTTCCGAGCATaGCTGTCATCTAGAATCATG | + |
|
Preference number: 3 (lower is better) Translates to: ATLVLTPWKLSIVATNSGQSFRA*LSSRIM Trigger: CATGATTCTAGATGACAGCAATGCTCGGAAGGACTG...TCCAGAGTTGGTGGCTACGATGCTCAACTTCCACGGCGTCAGCACCAGAGTTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| 3UTR-3UTR CAA 90 bp | TTGGGCAACTCTGGTGCTGACGCCGTGGAAGTTGAGCATCGTAGCCACCAACTCCAGTCCTTCCGAGCATaGCTGTCATCTAGAATCATG | + |
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Preference number: 3 (lower is better) Translates to: LGNSGADAVEVEHRSHQLQSFRA*LSSRIM Trigger: CATGATTCTAGATGACAGCAATGCTCGGAAGGACTG...GAGTTGGTGGCTACGATGCTCAACTTCCACGGCGTCAGCACCAGAGTTGCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| 3UTR GCA 72 bp | CCACCACCACTCAGGACTTCATTTCTCTGGCCTTTGTaGTTGGACCAATTTAGGCACAGGACAAAGGCAGTG | + |
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Preference number: 3 (lower is better) Translates to: PPPLRTSFLWPL*LDQFRHRTKAV Trigger: CACTGCCTTTGTCCTGTGCCTAAATTGGTCCAAGCACAAAGGCCAGAGAAATGAAGTCCTGAGTGGTGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| CDS-3UTR TCA 90 bp | CTTAGAGACTGCCGTGCGCCCTGCACTTTGAGGACACAGGGGCCGCTCCTCTTCCCACTGTGGAAGACATaGGCAGGGGGCTTCCTTATG | + |
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Preference number: 4 (lower is better) Translates to: LRDCRAPCTLRTQGPLLFPLWKT*AGGFLM Trigger: CATAAGGAAGCCCCCTGCTCATGTCTTCCACAGTGG...GAAGAGGAGCGGCCCCTGTGTCCTCAAAGTGCAGGGCGCACGGCAGTCTCTAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022522.15 ENSMUST00000168669.8 |
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| CDS-3UTR TCA 90 bp | GTGCTTGCGGAGCGCCTGGGCCAGCTCTTCGGGGGTGAAGCTCATGGCGCTGATATGGTCCTAGGCCTTTaGATACAGAGATCGGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: VLAERLGQLFGGEAHGADMVLGL*IQRSGA Trigger: TGCACCCGATCTCTGTATTCAAAGGCCTAGGACCAT...ATCAGCGCCATGAGCTTCACCCCCGAAGAGCTGGCCCAGGCGCTCCGCAAGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS-3UTR TCA 90 bp | GGTTCTCATGGACAGGCGCTCGGCAGGGGCTTCCATGACCTCCAGGGTGGCCCTATGGTCCTAGGCCTTTaGATACAGAGATCGGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: GSHGQALGRGFHDLQGGPMVLGL*IQRSGA Trigger: TGCACCCGATCTCTGTATTCAAAGGCCTAGGACCAT...AGGGCCACCCTGGAGGTCATGGAAGCCCCTGCCGAGCGCCTGTCCATGAGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS-3UTR CCA 90 bp | TTCGGGGGTGAAGCTCATGGCGCTGATGTTGTAGGTTCTCATGGACAGGCGCTCAGGTGGAGTGGAAGTTaGCATCGGCTGGGATCCGGT | + |
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Preference number: 4 (lower is better) Translates to: FGGEAHGADVVGSHGQALRWSGS*HRLGSG Trigger: ACCGGATCCCAGCCGATGCCAACTTCCACTCCACCT...GAGCGCCTGTCCATGAGAACCTACAACATCAGCGCCATGAGCTTCACCCCCGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS-3UTR TCA 90 bp | GGCCAGCTCTTCGGGGGTGAAGCTCATGGCGCTGATGTTGTAGGTTCTCATGGACCACTGTGGAAGACATaGGCAGGGGGCTTCCTTATG | + |
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Preference number: 4 (lower is better) Translates to: GQLFGGEAHGADVVGSHGPLWKT*AGGFLM Trigger: CATAAGGAAGCCCCCTGCTCATGTCTTCCACAGTGG...TCCATGAGAACCTACAACATCAGCGCCATGAGCTTCACCCCCGAAGAGCTGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS-3UTR GCA 90 bp | TTGGACCAATTTAGGCACAGGACAAAGGCAGTGTGTAAAGGAACTCCAACCCCAAGTCAGGCGCGTGCTTaGGGAGCGCCTGGGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LDQFRHRTKAVCKGTPTPSQARA*GAPGPA Trigger: AGCTGGCCCAGGCGCTCCGCAAGCACGCGCCTGACT...TGGGGTTGGAGTTCCTTTACACACTGCCTTTGTCCTGTGCCTAAATTGGTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| CDS-3UTR CCA 90 bp | TCCGAGCATTGCTGTCATCTAGAATCATGGGCCAGCTCTCCGCTATGGCCTGTCAGGTGGAGTGGAAGTTaGCATCGGCTGGGATCCGGT | + |
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Preference number: 4 (lower is better) Translates to: SEHCCHLESWASSPLWPVRWSGS*HRLGSG Trigger: ACCGGATCCCAGCCGATGCCAACTTCCACTCCACCT...GACAGGCCATAGCGGAGAGCTGGCCCATGATTCTAGATGACAGCAATGCTCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS-3UTR CCA 90 bp | GCATTGCTGTCATCTAGAATCATGGGCCAGCTCTCCGCTATGGCCTGTCGGAGGAGCCAGCTGATACGGTaGTTCACCACGATCTCACGG | + |
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Preference number: 4 (lower is better) Translates to: ALLSSRIMGQLSAMACRRSQLIR*FTTISR Trigger: CCGTGAGATCGTGGTGAACCACCGTATCAGCTGGCT...CCTCCGACAGGCCATAGCGGAGAGCTGGCCCATGATTCTAGATGACAGCAATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168669.8 |
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| CDS-3UTR TCA 90 bp | TCCAGCCCCAGTCCTTCCGAGCATTGCTGTCATCTAGAATCATGGGCCAGCTCTCCACTGTGGAAGACATaGGCAGGGGGCTTCCTTATG | + |
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Preference number: 4 (lower is better) Translates to: SSPSPSEHCCHLESWASSPLWKT*AGGFLM Trigger: CATAAGGAAGCCCCCTGCTCATGTCTTCCACAGTGG...AGAGCTGGCCCATGATTCTAGATGACAGCAATGCTCGGAAGGACTGGGGCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS-3UTR TCA 90 bp | CTGGCTCTCCAACTTAGAGACTGCCGTGCGCCCTGCACTTTGAGGACACAGGGGAATAGTATTCTCCCATaGGCTCTGTGTGGACCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LALQLRDCRAPCTLRTQGNSILP*ALCGPW Trigger: CCAAGGTCCACACAGAGCTCATGGGAGAATACTATT...CCCCTGTGTCCTCAAAGTGCAGGGCGCACGGCAGTCTCTAAGTTGGAGAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| CDS-3UTR GCA 90 bp | CTGGCTCTCCAACTTAGAGACTGCCGTGCGCCCTGCACTTTGAGGACACAGGGGCAAAGGCTCCAATCGTaGTGGGCACAAACAATCTCA | + |
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Preference number: 4 (lower is better) Translates to: LALQLRDCRAPCTLRTQGQRLQS*WAQTIS Trigger: TGAGATTGTTTGTGCCCAGCACGATTGGAGCCTTTG...CCCCTGTGTCCTCAAAGTGCAGGGCGCACGGCAGTCTCTAAGTTGGAGAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| CDS-3UTR CCA 90 bp | GTCCCCTGGGAGAGGCTAGAATTCAGTCTGGCTCTCCAACTTAGAGACTGCCGTAGCCAGCTGATACGGTaGTTCACCACGATCTCACGG | + |
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Preference number: 4 (lower is better) Translates to: VPWERLEFSLALQLRDCRSQLIR*FTTISR Trigger: CCGTGAGATCGTGGTGAACCACCGTATCAGCTGGCT...ACGGCAGTCTCTAAGTTGGAGAGCCAGACTGAATTCTAGCCTCTCCCAGGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| CDS-3UTR CCA 90 bp | CACAGGGGCCGCTCCTCTTCTTTAGTTCACTTGGGCAACTCTGGTGCTGACGCCAGGCTCCAATCGTGCTaGGCACAAACAATCTCACGT | + |
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Preference number: 4 (lower is better) Translates to: HRGRSSSLVHLGNSGADARLQSC*AQTISR Trigger: ACGTGAGATTGTTTGTGCCCAGCACGATTGGAGCCT...GGCGTCAGCACCAGAGTTGCCCAAGTGAACTAAAGAAGAGGAGCGGCCCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168669.8 |
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| CDS-3UTR TCA 90 bp | CTCTGGAAGATCAAAGTCATGCTTCCAGCCCCAGTCCTTCCGAGCATTGCTGTCCCACTGTGGAAGACATaGGCAGGGGGCTTCCTTATG | + |
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Preference number: 4 (lower is better) Translates to: LWKIKVMLPAPVLPSIAVPLWKT*AGGFLM Trigger: CATAAGGAAGCCCCCTGCTCATGTCTTCCACAGTGG...GACAGCAATGCTCGGAAGGACTGGGGCTGGAAGCATGACTTTGATCTTCCAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS-3UTR TCA 90 bp | GCTGTCCCCTGGGAGAGGCTAGAATTCAGTCTGGCTCTCCAACTTAGAGACTGCAGTGAAACAGCCAGCTaGTACGGTGGTTCACCACGA | + |
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Preference number: 4 (lower is better) Translates to: AVPWERLEFSLALQLRDCSETAS*YGGSPR Trigger: TCGTGGTGAACCACCGTATCAGCTGGCTGTTTCACT...GCAGTCTCTAAGTTGGAGAGCCAGACTGAATTCTAGCCTCTCCCAGGGGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| CDS-3UTR TCA 90 bp | GCATTGCTGTCATCTAGAATCATGGGCCAGCTCTCCGCTATGGCCTGTCGGAGGATGGTCCTAGGCCTTTaGATACAGAGATCGGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: ALLSSRIMGQLSAMACRRMVLGL*IQRSGA Trigger: TGCACCCGATCTCTGTATTCAAAGGCCTAGGACCAT...CCTCCGACAGGCCATAGCGGAGAGCTGGCCCATGATTCTAGATGACAGCAATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS-3UTR GCA 90 bp | GTCCCCTGGGAGAGGCTAGAATTCAGTCTGGCTCTCCAACTTAGAGACTGCCGTAGAGGCTTTGCTCTGTaGAGTCCCATTGACCACCTG | + |
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Preference number: 4 (lower is better) Translates to: VPWERLEFSLALQLRDCRRGFAL*SPIDHL Trigger: CAGGTGGTCAATGGGACTGCACAGAGCAAAGCCTCT...ACGGCAGTCTCTAAGTTGGAGAGCCAGACTGAATTCTAGCCTCTCCCAGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| CDS-3UTR CCA 90 bp | CCCCACGCAAGCTGTCCCCTGGGAGAGGCTAGAATTCAGTCTGGCTCTCCAACTGTTCCTCCTCCAGGCTaGGAATCTGCAGAAATGATT | + |
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Preference number: 4 (lower is better) Translates to: PHASCPLGEARIQSGSPTVPPPG*ESAEMI Trigger: AATCATTTCTGCAGATTCCCAGCCTGGAGGAGGAAC...AGTTGGAGAGCCAGACTGAATTCTAGCCTCTCCCAGGGGACAGCTTGCGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| 3UTR CAA 72 bp | TCAAAGTCATGCTTCCAGCCCCAGTCCTTCCGAGCATaGCTGTCATCTAGAATCATGGGCCAGCTCTCCGCT | + |
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Preference number: 4 (lower is better) Translates to: SKSCFQPQSFRA*LSSRIMGQLSA Trigger: AGCGGAGAGCTGGCCCATGATTCTAGATGACAGCAATGCTCGGAAGGACTGGGGCTGGAAGCATGACTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS-3UTR GCA 90 bp | CCCCACGCAAGCTGTCCCCTGGGAGAGGCTAGAATTCAGTCTGGCTCTCCAACTAGTCCTTCCGAGCATTaGTGTCATCTAGAATCATGG | + |
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Preference number: 4 (lower is better) Translates to: PHASCPLGEARIQSGSPTSPSEH*CHLESW Trigger: CCATGATTCTAGATGACAGCAATGCTCGGAAGGACT...AGTTGGAGAGCCAGACTGAATTCTAGCCTCTCCCAGGGGACAGCTTGCGTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| CDS-3UTR CCA 90 bp | CCGTGGAAGTTGAGCATCGTAGCCACCAACTCTGGAAGATCAAAGTCATGCTTCAGGTGGAGTGGAAGTTaGCATCGGCTGGGATCCGGT | + |
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Preference number: 4 (lower is better) Translates to: PWKLSIVATNSGRSKSCFRWSGS*HRLGSG Trigger: ACCGGATCCCAGCCGATGCCAACTTCCACTCCACCT...GAAGCATGACTTTGATCTTCCAGAGTTGGTGGCTACGATGCTCAACTTCCACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS-3UTR CCA 90 bp | TTCCAGCCCCAGTCCTTCCGAGCATTGCTGTCATCTAGAATCATGGGCCAGCTCAGGCTCCAATCGTGCTaGGCACAAACAATCTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: FQPQSFRALLSSRIMGQLRLQSC*AQTISR Trigger: ACGTGAGATTGTTTGTGCCCAGCACGATTGGAGCCT...GAGCTGGCCCATGATTCTAGATGACAGCAATGCTCGGAAGGACTGGGGCTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGCAACTCTGGTGCTGACGCCGTGGAAGTTGAGCATCGTAGCCACCAACTCGTTCCTCCTCCAGGCTaGGAATCTGCAGAAATGATT | + |
|
Preference number: 4 (lower is better) Translates to: LGNSGADAVEVEHRSHQLVPPPG*ESAEMI Trigger: AATCATTTCTGCAGATTCCCAGCCTGGAGGAGGAAC...GAGTTGGTGGCTACGATGCTCAACTTCCACGGCGTCAGCACCAGAGTTGCCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165776.7 |
||
| 3UTR CAA 72 bp | TTCACTTGGGCAACTCTGGTGCTGACGCCGTGGAAGTaGAGCATCGTAGCCACCAACTCTGGAAGATCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FTWATLVLTPWK*SIVATNSGRSK Trigger: CTTTGATCTTCCAGAGTTGGTGGCTACGATGCTCAACTTCCACGGCGTCAGCACCAGAGTTGCCCAAGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
||
| CDS-3UTR GCA 90 bp | AACTCTGGTGCTGACGCCGTGGAAGTTGAGCATCGTAGCCACCAACTCTGGAAGCAAAGGCTCCAATCGTaGTGGGCACAAACAATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NSGADAVEVEHRSHQLWKQRLQS*WAQTIS Trigger: TGAGATTGTTTGTGCCCAGCACGATTGGAGCCTTTG...CTTCCAGAGTTGGTGGCTACGATGCTCAACTTCCACGGCGTCAGCACCAGAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
||
| CDS-3UTR GCA 90 bp | CCCACGCAAGCTGTCCCCTGGGAGAGGCTAGAATTCAGTCTGGCTCTCCAACTTTCCAGGCTGGGAATCTaGAGAAATGATTCCAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: PTQAVPWERLEFSLALQLSRLGI*RNDSRI Trigger: TATCCTGGAATCATTTCTGCAGATTCCCAGCCTGGA...AAGTTGGAGAGCCAGACTGAATTCTAGCCTCTCCCAGGGGACAGCTTGCGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
||
| CDS-3UTR CCA 90 bp | TGCTTGGACCAATTTAGGCACAGGACAAAGGCAGTGTGTAAAGGAACTCCAACCAGGTGGAGTGGAAGTTaGCATCGGCTGGGATCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLDQFRHRTKAVCKGTPTRWSGS*HRLGSG Trigger: ACCGGATCCCAGCCGATGCCAACTTCCACTCCACCT...GGTTGGAGTTCCTTTACACACTGCCTTTGTCCTGTGCCTAAATTGGTCCAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
||
| CDS-3UTR GCA 90 bp | AACTCTGGTGCTGACGCCGTGGAAGTTGAGCATCGTAGCCACCAACTCTGGAAGTCCAGGCTGGGAATCTaGAGAAATGATTCCAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: NSGADAVEVEHRSHQLWKSRLGI*RNDSRI Trigger: TATCCTGGAATCATTTCTGCAGATTCCCAGCCTGGA...CTTCCAGAGTTGGTGGCTACGATGCTCAACTTCCACGGCGTCAGCACCAGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165776.7 |
||
| CDS-3UTR CCA 90 bp | CCCACGCAAGCTGTCCCCTGGGAGAGGCTAGAATTCAGTCTGGCTCTCCAACTTTGTAATCCAAGATGTTaGCATAAACAAACGGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PTQAVPWERLEFSLALQLCNPRC*HKQTGH Trigger: GTGGCCCGTTTGTTTATGCCAACATCTTGGATTACA...AAGTTGGAGAGCCAGACTGAATTCTAGCCTCTCCCAGGGGACAGCTTGCGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
||
| CDS-3UTR CCA 90 bp | AAGTTGAGCATCGTAGCCACCAACTCTGGAAGATCAAAGTCATGCTTCCAGCCCAGGCTCCAATCGTGCTaGGCACAAACAATCTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: KLSIVATNSGRSKSCFQPRLQSC*AQTISR Trigger: ACGTGAGATTGTTTGTGCCCAGCACGATTGGAGCCT...GGGCTGGAAGCATGACTTTGATCTTCCAGAGTTGGTGGCTACGATGCTCAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
||
| CDS-3UTR CCA 90 bp | ACGCAAGCTGTCCCCTGGGAGAGGCTAGAATTCAGTCTGGCTCTCCAACTTAGACGTAGCCACCAACTCTaGAAGATCAAAGTCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQAVPWERLEFSLALQLRRSHQL*KIKVML Trigger: AAGCATGACTTTGATCTTCCAGAGTTGGTGGCTACG...TCTAAGTTGGAGAGCCAGACTGAATTCTAGCCTCTCCCAGGGGACAGCTTGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
||
| 3UTR CAA 72 bp | CCACCACTCAGGACTTCATTTCTCTGGCCTTTGTGCTaGGACCAATTTAGGCACAGGACAAAGGCAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPLRTSFLWPLC*DQFRHRTKAVC Trigger: ACACACTGCCTTTGTCCTGTGCCTAAATTGGTCCAAGCACAAAGGCCAGAGAAATGAAGTCCTGAGTGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
||
| CDS-3UTR TCA 90 bp | TGCTTGGACCAATTTAGGCACAGGACAAAGGCAGTGTGTAAAGGAACTCCAACCATGGTCCTAGGCCTTTaGATACAGAGATCGGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLDQFRHRTKAVCKGTPTMVLGL*IQRSGA Trigger: TGCACCCGATCTCTGTATTCAAAGGCCTAGGACCAT...GGTTGGAGTTCCTTTACACACTGCCTTTGTCCTGTGCCTAAATTGGTCCAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
||
| CDS-3UTR GCA 90 bp | CAAAGTCATGCTTCCAGCCCCAGTCCTTCCGAGCATTGCTGTCATCTAGAATCACAAAGGCTCCAATCGTaGTGGGCACAAACAATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSHASSPSPSEHCCHLESQRLQS*WAQTIS Trigger: TGAGATTGTTTGTGCCCAGCACGATTGGAGCCTTTG...TGATTCTAGATGACAGCAATGCTCGGAAGGACTGGGGCTGGAAGCATGACTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
||
| CDS-3UTR GCA 90 bp | AGATCAAAGTCATGCTTCCAGCCCCAGTCCTTCCGAGCATTGCTGTCATCTAGACAAAGGCTCCAATCGTaGTGGGCACAAACAATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSKSCFQPQSFRALLSSRQRLQS*WAQTIS Trigger: TGAGATTGTTTGTGCCCAGCACGATTGGAGCCTTTG...TCTAGATGACAGCAATGCTCGGAAGGACTGGGGCTGGAAGCATGACTTTGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
||
| CDS-3UTR CCA 90 bp | TTGGACCAATTTAGGCACAGGACAAAGGCAGTGTGTAAAGGAACTCCAACCCCAAGGCTCCAATCGTGCTaGGCACAAACAATCTCACGT | + |
|
Preference number: 4 (lower is better) Translates to: LDQFRHRTKAVCKGTPTPRLQSC*AQTISR Trigger: ACGTGAGATTGTTTGTGCCCAGCACGATTGGAGCCT...TGGGGTTGGAGTTCCTTTACACACTGCCTTTGTCCTGTGCCTAAATTGGTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
||
| CDS-3UTR CCA 90 bp | GTCCCCTGGGAGAGGCTAGAATTCAGTCTGGCTCTCCAACTTAGAGACTGCCGTTTATATTCACATCTCTaGCTAAGGACACATTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VPWERLEFSLALQLRDCRLYSHL*LRTHLP Trigger: AGGCAAATGTGTCCTTAGCCAGAGATGTGAATATAA...ACGGCAGTCTCTAAGTTGGAGAGCCAGACTGAATTCTAGCCTCTCCCAGGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
||
| CDS-3UTR CCA 90 bp | TCCGAGCATTGCTGTCATCTAGAATCATGGGCCAGCTCTCCGCTATGGCCTGTCTTATATTCACATCTCTaGCTAAGGACACATTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SEHCCHLESWASSPLWPVLYSHL*LRTHLP Trigger: AGGCAAATGTGTCCTTAGCCAGAGATGTGAATATAA...GACAGGCCATAGCGGAGAGCTGGCCCATGATTCTAGATGACAGCAATGCTCGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168669.8 |
||
| CDS-3UTR CAA 90 bp | TCAGGCGCGTGCTTGCGGAGCGCCTGGGCCAGCTCTTCGGGGGTGAAGCTCATGGAGGTGGAGTGGAAGTaGGCATCGGCTGGGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SGACLRSAWASSSGVKLMEVEWK*ASAGIR Trigger: CCGGATCCCAGCCGATGCCAACTTCCACTCCACCTC...CATGAGCTTCACCCCCGAAGAGCTGGCCCAGGCGCTCCGCAAGCACGCGCCTGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
||
| CDS-3UTR CAA 90 bp | GGTTCTCATGGACAGGCGCTCGGCAGGGGCTTCCATGACCTCCAGGGTGGCCCTGAGGTGGAGTGGAAGTaGGCATCGGCTGGGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GSHGQALGRGFHDLQGGPEVEWK*ASAGIR Trigger: CCGGATCCCAGCCGATGCCAACTTCCACTCCACCTC...AGGGCCACCCTGGAGGTCATGGAAGCCCCTGCCGAGCGCCTGTCCATGAGAACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCTCTCCAACTTAGAGACTGCCGTGCGCCCTGCACTTTGAGGACACAGGGGAAGTCAGGCGCGTGCTaGCGGAGCGCCTGGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LALQLRDCRAPCTLRTQGKSGAC*RSAWAS Trigger: GCTGGCCCAGGCGCTCCGCAAGCACGCGCCTGACTT...CCCCTGTGTCCTCAAAGTGCAGGGCGCACGGCAGTCTCTAAGTTGGAGAGCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
||
| CDS-3UTR CAA 90 bp | CTGGCTCTCCAACTTAGAGACTGCCGTGCGCCCTGCACTTTGAGGACACAGGGGGAGGTGGAGTGGAAGTaGGCATCGGCTGGGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LALQLRDCRAPCTLRTQGEVEWK*ASAGIR Trigger: CCGGATCCCAGCCGATGCCAACTTCCACTCCACCTC...CCCCTGTGTCCTCAAAGTGCAGGGCGCACGGCAGTCTCTAAGTTGGAGAGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
||
| CDS CCA 90 bp | AGACCCGAGGAGGCTCAGCTTCCGAGATCGAGGTGGAGTGGAAGTTaGCATCGGCTGGGATCCGGTGCTGGGAGGTGCCTAGAAACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RPEEAQLPRSRWSGS*HRLGSGAGRCLETS Trigger: TGAAGTTTCTAGGCACCTCCCAGCACCGGATCCCAGCCGATGCCAACTTCCACTCCACCTCGATCTCGGAAGCTGAGCCTCCTCGGGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022522.15 ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
||
| CDS GCA 90 bp | TCCGAGATCGAGGTGGAGTGGAAGTTGGCATCGGCTGGGATCCGGTaGTGGGAGGTGCCTAGAAACTTCAAGGGCAAGACAAGCTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SEIEVEWKLASAGIR*WEVPRNFKGKTSFR Trigger: CCGGAAGCTTGTCTTGCCCTTGAAGTTTCTAGGCACCTCCCAGCACCGGATCCCAGCCGATGCCAACTTCCACTCCACCTCGATCTCGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022522.15 ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS CCA 90 bp | GAGATCGAGGTGGAGTGGAAGTTGGCATCGGCTGGGATCCGGTGCTaGGAGGTGCCTAGAAACTTCAAGGGCAAGACAAGCTTCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EIEVEWKLASAGIRC*EVPRNFKGKTSFRQ Trigger: CTGCCGGAAGCTTGTCTTGCCCTTGAAGTTTCTAGGCACCTCCCAGCACCGGATCCCAGCCGATGCCAACTTCCACTCCACCTCGATCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022522.15 ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS CCA 90 bp | CATGACCTCCAGGGTGGCCCTGAGGCAGTCACTGATGTACATCATTaGGAGCCTGGTGCCAGCCTCGAGGTTGCACTCGAATGTGCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: HDLQGGPEAVTDVHH*EPGASLEVALECAV Trigger: AACGGCACATTCGAGTGCAACCTCGAGGCTGGCACCAGGCTCCCAATGATGTACATCAGTGACTGCCTCAGGGCCACCCTGGAGGTCATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| CDS-3UTR CAA 90 bp | CATGGGCCAGCTCTCCGCTATGGCCTGTCGGAGGGGATCCACGCAGTAGGTGATGATGGTCCTAGGCCTTaGAATACAGAGATCGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HGPALRYGLSEGIHAVGDDGPRP*NTEIGC Trigger: GCACCCGATCTCTGTATTCAAAGGCCTAGGACCATC...ATCACCTACTGCGTGGATCCCCTCCGACAGGCCATAGCGGAGAGCTGGCCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS GCA 90 bp | CCTGGTGCCAGCCTCGAGGTTGCACTCGAATGTGCCGTTCTTTGCTaGAGCGTGGAAAATCTGGACGGCGTAGTCAGTTGTTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PGASLEVALECAVLC*SVENLDGVVSCSSS Trigger: GGAGGAGGAACAACTGACTACGCCGTCCAGATTTTCCACGCTGCAGCAAAGAACGGCACATTCGAGTGCAACCTCGAGGCTGGCACCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022522.15 ENSMUST00000165776.7 |
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| CDS GCA 90 bp | GAGCCTGGTGCCAGCCTCGAGGTTGCACTCGAATGTGCCGTTCTTTaGTGCAGCGTGGAAAATCTGGACGGCGTAGTCAGTTGTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EPGASLEVALECAVL*CSVENLDGVVSCSS Trigger: GGAGGAACAACTGACTACGCCGTCCAGATTTTCCACGCTGCAGCAAAGAACGGCACATTCGAGTGCAACCTCGAGGCTGGCACCAGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022522.15 ENSMUST00000165776.7 |
||
| CDS GCA 90 bp | GAGCCTGGTGCCAGCCTCGAGGTTGCACTCGAATGTGCCGTTCTTTaGTGCAGCGTGGAAAATCTGGACGGCGTAGTTTCTCCCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: EPGASLEVALECAVL*CSVENLDGVVSPMS Trigger: GCTCATGGGAGAAACTACGCCGTCCAGATTTTCCACGCTGCAGCAAAGAACGGCACATTCGAGTGCAACCTCGAGGCTGGCACCAGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168488.3 ENSMUST00000168669.8 |
||
| CDS-3UTR CAA 90 bp | TCAGGCGCGTGCTTGCGGAGCGCCTGGGCCAGCTCTTCGGGGGTGAAGCTCATGTCTGATAGGATCACATaGTCCTTCCCAAATCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGACLRSAWASSSGVKLMSDRIT*SFPNRF Trigger: GAAACGATTTGGGAAGGACAATGTGATCCTATCAGA...CATGAGCTTCACCCCCGAAGAGCTGGCCCAGGCGCTCCGCAAGCACGCGCCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS-3UTR CAA 90 bp | ACGCAAGCTGTCCCCTGGGAGAGGCTAGAATTCAGTCTGGCTCTCCAACTTAGAGGACGGCGTAGTCAGTaGTTCCTCCTCCAGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TQAVPWERLEFSLALQLRGRRSQ*FLLQAG Trigger: CCCAGCCTGGAGGAGGAACAACTGACTACGCCGTCC...TCTAAGTTGGAGAGCCAGACTGAATTCTAGCCTCTCCCAGGGGACAGCTTGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| CDS-3UTR CAA 90 bp | GAGCATCGTAGCCACCAACTCTGGAAGATCAAAGTCATGCTTCCAGCCCCAGTCGGACGGCGTAGTCAGTaGTTCCTCCTCCAGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: EHRSHQLWKIKVMLPAPVGRRSQ*FLLQAG Trigger: CCCAGCCTGGAGGAGGAACAACTGACTACGCCGTCC...GACTGGGGCTGGAAGCATGACTTTGATCTTCCAGAGTTGGTGGCTACGATGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165776.7 |
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| CDS TCA 90 bp | CCTCTCCCACGGCACTCAGCAGGGCACTGTAGTGAAACAGCCAGCTaGTACGGTGGTTCACCACGATCTCACGGAGGCTCTTGTAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLPRHSAGHCSETAS*YGGSPRSHGGSCNP Trigger: TGGATTACAAGAGCCTCCGTGAGATCGTGGTGAACCACCGTATCAGCTGGCTGTTTCACTACAGTGCCCTGCTGAGTGCCGTGGGAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022522.15 ENSMUST00000168669.8 |
||
| CDS GCA 90 bp | ACATCATTGGGAGCCTGGTGCCAGCCTCGAGGTTGCACTCGAATGTaGCGTTCTTTGCTGCAGCGTGGAAAATCTGGACGGCGTAGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TSLGAWCQPRGCTRM*RSLLQRGKSGRRSQ Trigger: CTGACTACGCCGTCCAGATTTTCCACGCTGCAGCAAAGAACGGCACATTCGAGTGCAACCTCGAGGCTGGCACCAGGCTCCCAATGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
||
| CDS GCA 90 bp | CCTGGTGCCAGCCTCGAGGTTGCACTCGAATGTGCCGTTCTTTGCTaGAGCGTGGAAAATCTGGACGGCGTAGTTTCTCCCATGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGASLEVALECAVLC*SVENLDGVVSPMSS Trigger: AGAGCTCATGGGAGAAACTACGCCGTCCAGATTTTCCACGCTGCAGCAAAGAACGGCACATTCGAGTGCAACCTCGAGGCTGGCACCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168488.3 ENSMUST00000168669.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTCCCCTGGGAGAGGCTAGAATTCAGTCTGGCTCTCCAACTTAGAGACTGCTGGCTAAGGACACATTaGCCTCTCCCACGGCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: AVPWERLEFSLALQLRDCWLRTH*PLPRHS Trigger: TGAGTGCCGTGGGAGAGGCAAATGTGTCCTTAGCCA...GCAGTCTCTAAGTTGGAGAGCCAGACTGAATTCTAGCCTCTCCCAGGGGACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
||
| CDS-3UTR CAA 90 bp | GACCAATTTAGGCACAGGACAAAGGCAGTGTGTAAAGGAACTCCAACCCCACGCCGGCAGCTAGAGGCTTaGCTCTGTGCAGTCCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: DQFRHRTKAVCKGTPTPRRQLEA*LCAVPL Trigger: CAATGGGACTGCACAGAGCAAAGCCTCTAGCTGCCG...GCGTGGGGTTGGAGTTCCTTTACACACTGCCTTTGTCCTGTGCCTAAATTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
||
| CDS-3UTR CAA 90 bp | AACTCTGGTGCTGACGCCGTGGAAGTTGAGCATCGTAGCCACCAACTCTGGAAGGATGGTCCTAGGCCTTaGAATACAGAGATCGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: NSGADAVEVEHRSHQLWKDGPRP*NTEIGC Trigger: GCACCCGATCTCTGTATTCAAAGGCCTAGGACCATC...CTTCCAGAGTTGGTGGCTACGATGCTCAACTTCCACGGCGTCAGCACCAGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
||
| CDS-3UTR CAA 90 bp | CATGGGCCAGCTCTCCGCTATGGCCTGTCGGAGGGGATCCACGCAGTAGGTGATACAAACAATCTCACGTaGTATTCAGCTGCAACATCT | + |
|
Preference number: 5 (lower is better) Translates to: HGPALRYGLSEGIHAVGDTNNLT*YSAATS Trigger: AGATGTTGCAGCTGAATACAACGTGAGATTGTTTGT...ATCACCTACTGCGTGGATCCCCTCCGACAGGCCATAGCGGAGAGCTGGCCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
||
| CDS-3UTR CAA 90 bp | AGATCAAAGTCATGCTTCCAGCCCCAGTCCTTCCGAGCATTGCTGTCATCTAGATGGCTAAGGACACATTaGCCTCTCCCACGGCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSKSCFQPQSFRALLSSRWLRTH*PLPRHS Trigger: TGAGTGCCGTGGGAGAGGCAAATGTGTCCTTAGCCA...TCTAGATGACAGCAATGCTCGGAAGGACTGGGGCTGGAAGCATGACTTTGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168669.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCTCTCCAACTTAGAGACTGCCGTGCGCCCTGCACTTTGAGGACACAGGGGACAAACAATCTCACGTaGTATTCAGCTGCAACATCT | + |
|
Preference number: 5 (lower is better) Translates to: LALQLRDCRAPCTLRTQGTNNLT*YSAATS Trigger: AGATGTTGCAGCTGAATACAACGTGAGATTGTTTGT...CCCCTGTGTCCTCAAAGTGCAGGGCGCACGGCAGTCTCTAAGTTGGAGAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
||
| CDS-3UTR CAA 90 bp | ACCAACTCTGGAAGATCAAAGTCATGCTTCCAGCCCCAGTCCTTCCGAGCATTGGATGGTCCTAGGCCTTaGAATACAGAGATCGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TNSGRSKSCFQPQSFRALDGPRP*NTEIGC Trigger: GCACCCGATCTCTGTATTCAAAGGCCTAGGACCATC...CAATGCTCGGAAGGACTGGGGCTGGAAGCATGACTTTGATCTTCCAGAGTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
||
| CDS-3UTR CAA 90 bp | GGCAACTCTGGTGCTGACGCCGTGGAAGTTGAGCATCGTAGCCACCAACTCTGGACAAACAATCTCACGTaGTATTCAGCTGCAACATCT | + |
|
Preference number: 5 (lower is better) Translates to: GNSGADAVEVEHRSHQLWTNNLT*YSAATS Trigger: AGATGTTGCAGCTGAATACAACGTGAGATTGTTTGT...CCAGAGTTGGTGGCTACGATGCTCAACTTCCACGGCGTCAGCACCAGAGTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
||
| CDS-3UTR CAA 90 bp | GCTGTCCCCTGGGAGAGGCTAGAATTCAGTCTGGCTCTCCAACTTAGAGACTGCTCTGATAGGATCACATaGTCCTTCCCAAATCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AVPWERLEFSLALQLRDCSDRIT*SFPNRF Trigger: GAAACGATTTGGGAAGGACAATGTGATCCTATCAGA...GCAGTCTCTAAGTTGGAGAGCCAGACTGAATTCTAGCCTCTCCCAGGGGACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| CDS-3UTR CAA 90 bp | AACTCTGGTGCTGACGCCGTGGAAGTTGAGCATCGTAGCCACCAACTCTGGAAGTCTGATAGGATCACATaGTCCTTCCCAAATCGTTTC | + |
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Preference number: 5 (lower is better) Translates to: NSGADAVEVEHRSHQLWKSDRIT*SFPNRF Trigger: GAAACGATTTGGGAAGGACAATGTGATCCTATCAGA...CTTCCAGAGTTGGTGGCTACGATGCTCAACTTCCACGGCGTCAGCACCAGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS-3UTR CAA 90 bp | TTCCAGCCCCAGTCCTTCCGAGCATTGCTGTCATCTAGAATCATGGGCCAGCTCTCTGATAGGATCACATaGTCCTTCCCAAATCGTTTC | + |
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Preference number: 5 (lower is better) Translates to: FQPQSFRALLSSRIMGQLSDRIT*SFPNRF Trigger: GAAACGATTTGGGAAGGACAATGTGATCCTATCAGA...GAGCTGGCCCATGATTCTAGATGACAGCAATGCTCGGAAGGACTGGGGCTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS-3UTR CAA 90 bp | TGCTTGGACCAATTTAGGCACAGGACAAAGGCAGTGTGTAAAGGAACTCCAACCGATGGTCCTAGGCCTTaGAATACAGAGATCGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: CLDQFRHRTKAVCKGTPTDGPRP*NTEIGC Trigger: GCACCCGATCTCTGTATTCAAAGGCCTAGGACCATC...GGTTGGAGTTCCTTTACACACTGCCTTTGTCCTGTGCCTAAATTGGTCCAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| CDS-3UTR CAA 90 bp | TTGGACCAATTTAGGCACAGGACAAAGGCAGTGTGTAAAGGAACTCCAACCCCACTCTGTGCAGTCCCATaGACCACCTGTTTTAGCATC | + |
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Preference number: 5 (lower is better) Translates to: LDQFRHRTKAVCKGTPTPLCAVP*TTCFSI Trigger: GATGCTAAAACAGGTGGTCAATGGGACTGCACAGAG...TGGGGTTGGAGTTCCTTTACACACTGCCTTTGTCCTGTGCCTAAATTGGTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| CDS-3UTR CAA 90 bp | TTGGACCAATTTAGGCACAGGACAAAGGCAGTGTGTAAAGGAACTCCAACCCCACAGTCCTTCCGAGCATaGCTGTCATCTAGAATCATG | + |
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Preference number: 5 (lower is better) Translates to: LDQFRHRTKAVCKGTPTPQSFRA*LSSRIM Trigger: CATGATTCTAGATGACAGCAATGCTCGGAAGGACTG...TGGGGTTGGAGTTCCTTTACACACTGCCTTTGTCCTGTGCCTAAATTGGTCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| CDS TCA 90 bp | TCAGCTGCAACATCTAGAACGTTATGCAATCCACTGTGGAAGACATaGGCAGGGGGCTTCCTTATGTCTGATAGGATCACATTGTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: SAATSRTLCNPLWKT*AGGFLMSDRITLSF Trigger: GAAGGACAATGTGATCCTATCAGACATAAGGAAGCCCCCTGCTCATGTCTTCCACAGTGGATTGCATAACGTTCTAGATGTTGCAGCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 |
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| CDS-3UTR CAA 90 bp | AGATCAAAGTCATGCTTCCAGCCCCAGTCCTTCCGAGCATTGCTGTCATCTAGAACAAACAATCTCACGTaGTATTCAGCTGCAACATCT | + |
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Preference number: 5 (lower is better) Translates to: RSKSCFQPQSFRALLSSRTNNLT*YSAATS Trigger: AGATGTTGCAGCTGAATACAACGTGAGATTGTTTGT...TCTAGATGACAGCAATGCTCGGAAGGACTGGGGCTGGAAGCATGACTTTGATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS CCA 72 bp | GAGGCTCAGCTTCCGAGATCGAGGTGGAGTGGAAGTTaGCATCGGCTGGGATCCGGTGCTGGGAGGTGCCTA | + |
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Preference number: 6 (lower is better) Translates to: EAQLPRSRWSGS*HRLGSGAGRCL Trigger: TAGGCACCTCCCAGCACCGGATCCCAGCCGATGCCAACTTCCACTCCACCTCGATCTCGGAAGCTGAGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022522.15 ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS CCA 72 bp | TCAAGACCCGAGGAGGCTCAGCTTCCGAGATCGAGGTaGAGTGGAAGTTGGCATCGGCTGGGATCCGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: SRPEEAQLPRSR*SGSWHRLGSGA Trigger: AGCACCGGATCCCAGCCGATGCCAACTTCCACTCCACCTCGATCTCGGAAGCTGAGCCTCCTCGGGTCTTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022522.15 ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS GCA 72 bp | GGAGCCTGGTGCCAGCCTCGAGGTTGCACTCGAATGTaGCGTTCTTTGCTGCAGCGTGGAAAATCTGGACGG | + |
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Preference number: 6 (lower is better) Translates to: GAWCQPRGCTRM*RSLLQRGKSGR Trigger: CCGTCCAGATTTTCCACGCTGCAGCAAAGAACGGCACATTCGAGTGCAACCTCGAGGCTGGCACCAGGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022522.15 ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS CCA 72 bp | CAGGGTGGCCCTGAGGCAGTCACTGATGTACATCATTaGGAGCCTGGTGCCAGCCTCGAGGTTGCACTCGAA | + |
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Preference number: 6 (lower is better) Translates to: QGGPEAVTDVHH*EPGASLEVALE Trigger: TTCGAGTGCAACCTCGAGGCTGGCACCAGGCTCCCAATGATGTACATCAGTGACTGCCTCAGGGCCACCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| CDS CAA 90 bp | GGAGCCTGGTGCCAGCCTCGAGGTTGCACTCGAATGTGCCGTTCTTaGCTGCAGCGTGGAAAATCTGGACGGCGTAGTCAGTTGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: GAWCQPRGCTRMCRS*LQRGKSGRRSQLFL Trigger: GAGGAACAACTGACTACGCCGTCCAGATTTTCCACGCTGCAGCAAAGAACGGCACATTCGAGTGCAACCTCGAGGCTGGCACCAGGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022522.15 ENSMUST00000165776.7 |
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| CDS CAA 90 bp | GGAGCCTGGTGCCAGCCTCGAGGTTGCACTCGAATGTGCCGTTCTTaGCTGCAGCGTGGAAAATCTGGACGGCGTAGTTTCTCCCATGAG | + |
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Preference number: 6 (lower is better) Translates to: GAWCQPRGCTRMCRS*LQRGKSGRRSFSHE Trigger: CTCATGGGAGAAACTACGCCGTCCAGATTTTCCACGCTGCAGCAAAGAACGGCACATTCGAGTGCAACCTCGAGGCTGGCACCAGGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS TCA 72 bp | CGGCACTCAGCAGGGCACTGTAGTGAAACAGCCAGCTaGTACGGTGGTTCACCACGATCTCACGGAGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: RHSAGHCSETAS*YGGSPRSHGGS Trigger: AGAGCCTCCGTGAGATCGTGGTGAACCACCGTATCAGCTGGCTGTTTCACTACAGTGCCCTGCTGAGTGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022522.15 ENSMUST00000168669.8 |
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| CDS CAA 90 bp | GAGCTCTGTGTGGACCTTGGATACCCCATAGATGGTCCTAGGCCTTaGAATACAGAGATCGGGTGCAGGGTTCCGGGGAGAGGTAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: ELCVDLGYPIDGPRP*NTEIGCRVPGRGRS Trigger: GGACCTACCTCTCCCCGGAACCCTGCACCCGATCTCTGTATTCAAAGGCCTAGGACCATCTATGGGGTATCCAAGGTCCACACAGAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022522.15 ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS GCA 72 bp | GCCAGCCTCGAGGTTGCACTCGAATGTGCCGTTCTTTaGTGCAGCGTGGAAAATCTGGACGGCGTAGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: ASLEVALECAVL*CSVENLDGVVS Trigger: ACTGACTACGCCGTCCAGATTTTCCACGCTGCAGCAAAGAACGGCACATTCGAGTGCAACCTCGAGGCTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022522.15 ENSMUST00000165776.7 |
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| CDS CAA 72 bp | TGCCAGCCTCGAGGTTGCACTCGAATGTGCCGTTCTTaGCTGCAGCGTGGAAAATCTGGACGGCGTAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: CQPRGCTRMCRS*LQRGKSGRRSQ Trigger: CTGACTACGCCGTCCAGATTTTCCACGCTGCAGCAAAGAACGGCACATTCGAGTGCAACCTCGAGGCTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022522.15 ENSMUST00000165776.7 |
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| CDS CAA 72 bp | ATGTACATCATTGGGAGCCTGGTGCCAGCCTCGAGGTaGCACTCGAATGTGCCGTTCTTTGCTGCAGCGTGG | + |
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Preference number: 6 (lower is better) Translates to: MYIIGSLVPASR*HSNVPFFAAAW Trigger: CCACGCTGCAGCAAAGAACGGCACATTCGAGTGCAACCTCGAGGCTGGCACCAGGCTCCCAATGATGTACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| CDS GCA 72 bp | AGCCTCGAGGTTGCACTCGAATGTGCCGTTCTTTGCTaGAGCGTGGAAAATCTGGACGGCGTAGTTTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SLEVALECAVLC*SVENLDGVVSP Trigger: GGGAGAAACTACGCCGTCCAGATTTTCCACGCTGCAGCAAAGAACGGCACATTCGAGTGCAACCTCGAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS GCA 72 bp | GCCAGCCTCGAGGTTGCACTCGAATGTGCCGTTCTTTaGTGCAGCGTGGAAAATCTGGACGGCGTAGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: ASLEVALECAVL*CSVENLDGVVS Trigger: AGAAACTACGCCGTCCAGATTTTCCACGCTGCAGCAAAGAACGGCACATTCGAGTGCAACCTCGAGGCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS CAA 72 bp | GTGGACCTTGGATACCCCATAGATGGTCCTAGGCCTTaGAATACAGAGATCGGGTGCAGGGTTCCGGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: VDLGYPIDGPRP*NTEIGCRVPGR Trigger: TCTCCCCGGAACCCTGCACCCGATCTCTGTATTCAAAGGCCTAGGACCATCTATGGGGTATCCAAGGTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022522.15 ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS CAA 72 bp | TGCCAGCCTCGAGGTTGCACTCGAATGTGCCGTTCTTaGCTGCAGCGTGGAAAATCTGGACGGCGTAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: CQPRGCTRMCRS*LQRGKSGRRSF Trigger: GAAACTACGCCGTCCAGATTTTCCACGCTGCAGCAAAGAACGGCACATTCGAGTGCAACCTCGAGGCTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168488.3 ENSMUST00000168669.8 |
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| CDS CAA 90 bp | CAGTCACTGATGTACATCATTGGGAGCCTGGTGCCAGCCTCGAGGTaGCACTCGAATGTGCCGTTCTTTGCTGCAGCGTGGAAAATCTGG | + |
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Preference number: 6 (lower is better) Translates to: QSLMYIIGSLVPASR*HSNVPFFAAAWKIW Trigger: CCAGATTTTCCACGCTGCAGCAAAGAACGGCACATTCGAGTGCAACCTCGAGGCTGGCACCAGGCTCCCAATGATGTACATCAGTGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| CDS GCA 72 bp | AGCCTCGAGGTTGCACTCGAATGTGCCGTTCTTTGCTaGAGCGTGGAAAATCTGGACGGCGTAGTCAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: SLEVALECAVLC*SVENLDGVVSC Trigger: ACAACTGACTACGCCGTCCAGATTTTCCACGCTGCAGCAAAGAACGGCACATTCGAGTGCAACCTCGAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022522.15 ENSMUST00000165776.7 |
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| CDS CAA 72 bp | TTCAAGGGCAAGACAAGCTTCCGGCAGCTAGAGGCTTaGCTCTGTGCAGTCCCATTGACCACCTGTTTTAGC | + |
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Preference number: 6 (lower is better) Translates to: FKGKTSFRQLEA*LCAVPLTTCFS Trigger: GCTAAAACAGGTGGTCAATGGGACTGCACAGAGCAAAGCCTCTAGCTGCCGGAAGCTTGTCTTGCCCTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| CDS CAA 90 bp | CCTAGAAACTTCAAGGGCAAGACAAGCTTCCGGCAGCTAGAGGCTTaGCTCTGTGCAGTCCCATTGACCACCTGTTTTAGCATCCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: PRNFKGKTSFRQLEA*LCAVPLTTCFSIPR Trigger: CCTTGGGATGCTAAAACAGGTGGTCAATGGGACTGCACAGAGCAAAGCCTCTAGCTGCCGGAAGCTTGTCTTGCCCTTGAAGTTTCTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| CDS TCA 72 bp | CAGTTGTTCCTCCTCCAGGCTGGGAATCTGCAGAAATaGTTCCAGGATAACGCAGGCACCGAAAATCTAACC | + |
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Preference number: 6 (lower is better) Translates to: QLFLLQAGNLQK*FQDNAGTENLT Trigger: GGTTAGATTTTCGGTGCCTGCGTTATCCTGGAATCATTTCTGCAGATTCCCAGCCTGGAGGAGGAACAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| CDS TCA 72 bp | CAGTTGTTCCTCCTCCAGGCTGGGAATCTGCAGAAATaGTTCCAGGATAACGCAGGCACCGAAAATTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: QLFLLQAGNLQK*FQDNAGTENFS Trigger: GGAGAAATTTTCGGTGCCTGCGTTATCCTGGAATCATTTCTGCAGATTCCCAGCCTGGAGGAGGAACAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165776.7 |
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| CDS CAA 90 bp | GTAGGTCCAAAGGCTCCAATCGTGCTGGGCACAAACAATCTCACGTaGTATTCAGCTGCAACATCTAGAACGTTATGCAATCCACTGTGG | + |
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Preference number: 6 (lower is better) Translates to: VGPKAPIVLGTNNLT*YSAATSRTLCNPLW Trigger: CCACAGTGGATTGCATAACGTTCTAGATGTTGCAGCTGAATACAACGTGAGATTGTTTGTGCCCAGCACGATTGGAGCCTTTGGACCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165776.7 ENSMUST00000168488.3 |
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| CDS TCA 72 bp | AATCTAACCCGTACCGGTAATAATAGTATTCTCCCATaGGCTCTGTGTGGACCTTGGATACCCCATAGATGG | + |
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Preference number: 6 (lower is better) Translates to: NLTRTGNNSILP*ALCGPWIPHRW Trigger: CCATCTATGGGGTATCCAAGGTCCACACAGAGCTCATGGGAGAATACTATTATTACCGGTACGGGTTAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022522.15 |
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| CDS CAA 90 bp | GTAGGTCCAAAGGCTCCAATCGTGCTGGGCACAAACAATCTCACGTaGTATTCAGCTGCAACATCTAGAACGTTATGCAATCCAGTTATA | + |
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Preference number: 6 (lower is better) Translates to: VGPKAPIVLGTNNLT*YSAATSRTLCNPVI Trigger: TATAACTGGATTGCATAACGTTCTAGATGTTGCAGCTGAATACAACGTGAGATTGTTTGTGCCCAGCACGATTGGAGCCTTTGGACCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022522.15 ENSMUST00000168669.8 |
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| CDS CAA 72 bp | AAGGCTCCAATCGTGCTGGGCACAAACAATCTCACGTaGTATTCAGCTGCAACATCTAGAACGTTATGCAAT | + |
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Preference number: 6 (lower is better) Translates to: KAPIVLGTNNLT*YSAATSRTLCN Trigger: ATTGCATAACGTTCTAGATGTTGCAGCTGAATACAACGTGAGATTGTTTGTGCCCAGCACGATTGGAGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022522.15 ENSMUST00000165776.7 ENSMUST00000168488.3 ENSMUST00000168669.8 |
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