Pregenerated sensors for TCTN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025008Ensembl transcript IDs: ENSMUST00000025981.15, ENSMUST00000132452.2, ENSMUST00000135795.8
Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTAGTCACTTTTCTAGCGTACCATCTTCAGTTCATAAAGATTCCTaGCTGGGCGTGATAGCACGTGCCTTTAATCCAGCACTCTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: CSHFSSVPSSVHKDS*LGVIARAFNPALWR Trigger: CCTCCAGAGTGCTGGATTAAAGGCACGTGCTATCACGCCCAGCCAGGAATCTTTATGAACTGAAGATGGTACGCTAGAAAAGTGACTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| 3UTR CCA 90 bp | TCTATTACACCACACCACAAAGTAGGGGAGGACAGAAAGGACTGGTaGAGTCATTTGCTAGTGAGAAAAGGACATAGGACGCCATTCACT | + |
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Preference number: 1 (lower is better) Translates to: SITPHHKVGEDRKDW*SHLLVRKGHRTPFT Trigger: AGTGAATGGCGTCCTATGTCCTTTTCTCACTAGCAAATGACTCCACCAGTCCTTTCTGTCCTCCCCTACTTTGTGGTGTGGTGTAATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| 3UTR CCA 90 bp | CACTTTGGGAAACGAGTAGAAAGAACTACTTTTCTAACTCAGGTCTaGGTAAAGGGTGTGGCTATAACTTTGGCAAAAGAGCCAGACAAA | + |
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Preference number: 1 (lower is better) Translates to: HFGKRVERTTFLTQV*VKGVAITLAKEPDK Trigger: TTTGTCTGGCTCTTTTGCCAAAGTTATAGCCACACCCTTTACCCAGACCTGAGTTAGAAAAGTAGTTCTTTCTACTCGTTTCCCAAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| 3UTR-3UTR TCA 90 bp | CAGGGTGTCTATCATGAGGTGTCAACTTCTGCCACGCTACTGGACATAACAGAAAAATCTCTGTGCGCCTaGGACCAGCCTGGTCTACAT | + |
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Preference number: 2 (lower is better) Translates to: QGVYHEVSTSATLLDITEKSLCA*DQPGLH Trigger: ATGTAGACCAGGCTGGTCTCAGGCGCACAGAGATTT...TTCTGTTATGTCCAGTAGCGTGGCAGAAGTTGACACCTCATGATAGACACCCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| 3UTR-3UTR TCA 90 bp | GATCCTGGCAAACACAACCTGAAGAGATGGGGGCTCTTGGCCTGCCCAGCTTTACCAAGAGGAGAGCTATaGAGATGGAATACTTGTAGT | + |
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Preference number: 2 (lower is better) Translates to: DPGKHNLKRWGLLACPALPRGEL*RWNTCS Trigger: ACTACAAGTATTCCATCTTCATAGCTCTCCTCTTGG...TAAAGCTGGGCAGGCCAAGAGCCCCCATCTCTTCAGGTTGTGTTTGCCAGGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTAACTCAGGTCTGGGTAAAGGGTGTGGCTATAACTTTGGCAAAAGAGCCCACAACCTGAAGAGATaGGGGCTCTTGGCCTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: FSNSGLGKGCGYNFGKRAHNLKR*GLLACP Trigger: TGGGCAGGCCAAGAGCCCCCATCTCTTCAGGTTGTG...GGCTCTTTTGCCAAAGTTATAGCCACACCCTTTACCCAGACCTGAGTTAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| 3UTR-3UTR CCA 90 bp | AACTCAGGTCTGGGTAAAGGGTGTGGCTATAACTTTGGCAAAAGAGCCAGACAATTTAATCCAGCACTCTaGAGGCAGAGGCAAAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: NSGLGKGCGYNFGKRARQFNPAL*RQRQRG Trigger: TCCCCTTTGCCTCTGCCTCCAGAGTGCTGGATTAAA...TTGTCTGGCTCTTTTGCCAAAGTTATAGCCACACCCTTTACCCAGACCTGAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| 3UTR-3UTR TCA 90 bp | GAATTGTCAGCACTAATGCAGGGGCCAGCCTCTCTGAGTTCACTCTGGATGATGTCCCATAGGGAAAAATaGAACCGGATTCTTTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: ELSALMQGPASLSSLWMMSHREK*NRILFF Trigger: AAAGAAAAGAATCCGGTTTCATTTTTCCCTATGGGA...CATCATCCAGAGTGAACTCAGAGAGGCTGGCCCCTGCATTAGTGCTGACAATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| 3UTR-3UTR CCA 90 bp | GGACGCCATTCACTTTGGGAAACGAGTAGAAAGAACTACTTTTCTAACTCAGGTTCTCTGAGTTCACTCTaGATGATGCAGGAGCATGCG | + |
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Preference number: 2 (lower is better) Translates to: GRHSLWETSRKNYFSNSGSLSSL*MMQEHA Trigger: CGCATGCTCCTGCATCATCCAGAGTGAACTCAGAGA...ACCTGAGTTAGAAAAGTAGTTCTTTCTACTCGTTTCCCAAAGTGAATGGCGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| 3UTR-3UTR CCA 90 bp | AAACCTCATATACATAAAAATCCTCAGGGTGTCTATCATGAGGTGTCAACTTCTGAGGACAGAAAGGACTaGTGGAGTCATTTGCTAGTG | + |
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Preference number: 2 (lower is better) Translates to: KPHIHKNPQGVYHEVSTSEDRKD*WSHLLV Trigger: CACTAGCAAATGACTCCACCAGTCCTTTCTGTCCTC...AGAAGTTGACACCTCATGATAGACACCCTGAGGATTTTTATGTATATGAGGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| 3UTR CAA 90 bp | ACCAGAAATACGGACCACGAAGTGGTATACTTTCTTACATTCTTCTaGATGTGTGTGATAAACACAGATAGACTCAAGACTGGTTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: TRNTDHEVVYFLTFF*MCVINTDRLKTGFC Trigger: ACAAAAACCAGTCTTGAGTCTATCTGTGTTTATCACACACATCAAGAAGAATGTAAGAAAGTATACCACTTCGTGGTCCGTATTTCTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
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| 3UTR CCA 72 bp | GCACTAATGCAGGGGCCAGCCTCTCTGAGTTCACTCTaGATGATGCAGGAGCATGCGCCTATGAGATCCTGG | + |
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Preference number: 3 (lower is better) Translates to: ALMQGPASLSSL*MMQEHAPMRSW Trigger: CCAGGATCTCATAGGCGCATGCTCCTGCATCATCCAGAGTGAACTCAGAGAGGCTGGCCCCTGCATTAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| 3UTR GCA 72 bp | GGCAAACACAACCTGAAGAGATGGGGGCTCTTGGCCTaGCCAGCTTTAGACGCAGAGAACCCAGTGTGTATC | + |
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Preference number: 3 (lower is better) Translates to: GKHNLKRWGLLA*PALDAENPVCI Trigger: GATACACACTGGGTTCTCTGCGTCTAAAGCTGGGCAGGCCAAGAGCCCCCATCTCTTCAGGTTGTGTTTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| 3UTR CCA 72 bp | GCAAAGGGGAAAATCTCTGTGCGCCTGAGACCAGCCTaGTCTACATTGGGAGTTCTAGGCCAACCAAGACGA | + |
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Preference number: 3 (lower is better) Translates to: AKGKISVRLRPA*STLGVLGQPRR Trigger: TCGTCTTGGTTGGCCTAGAACTCCCAATGTAGACCAGGCTGGTCTCAGGCGCACAGAGATTTTCCCCTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| 3UTR-3UTR CAA 90 bp | AACTCAGGTCTGGGTAAAGGGTGTGGCTATAACTTTGGCAAAAGAGCCAGACAAGTTTCCCGGCTTGAATaGTCAGCACTAATGCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: NSGLGKGCGYNFGKRARQVSRLE*SALMQG Trigger: CCCCTGCATTAGTGCTGACAATTCAAGCCGGGAAAC...TTGTCTGGCTCTTTTGCCAAAGTTATAGCCACACCCTTTACCCAGACCTGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| 3UTR CCA 72 bp | ACACCACACCACAAAGTAGGGGAGGACAGAAAGGACTaGTGGAGTCATTTGCTAGTGAGAAAAGGACATAGG | + |
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Preference number: 3 (lower is better) Translates to: TPHHKVGEDRKD*WSHLLVRKGHR Trigger: CCTATGTCCTTTTCTCACTAGCAAATGACTCCACCAGTCCTTTCTGTCCTCCCCTACTTTGTGGTGTGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| 3UTR-3UTR CAA 90 bp | AGCACTAATGCAGGGGCCAGCCTCTCTGAGTTCACTCTGGATGATGCAGGAGCAATAAGTAGGCTGTCTTaGTTTCCCATAGGGAAAAAT | + |
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Preference number: 3 (lower is better) Translates to: STNAGASLSEFTLDDAGAISRLS*FPIGKN Trigger: ATTTTTCCCTATGGGAAACAAAGACAGCCTACTTAT...TGCTCCTGCATCATCCAGAGTGAACTCAGAGAGGCTGGCCCCTGCATTAGTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| 3UTR CCA 72 bp | AAACGAGTAGAAAGAACTACTTTTCTAACTCAGGTCTaGGTAAAGGGTGTGGCTATAACTTTGGCAAAAGAG | + |
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Preference number: 3 (lower is better) Translates to: KRVERTTFLTQV*VKGVAITLAKE Trigger: CTCTTTTGCCAAAGTTATAGCCACACCCTTTACCCAGACCTGAGTTAGAAAAGTAGTTCTTTCTACTCGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR CCA 90 bp | CAACCTGAAGAGATGGGGGCTCTTGGCCTGCCCAGCTTTAGACGCAGAGAACCCGGAAAGCCCGGGCTGTaGAGGAGGGCTGCGGTCGGG | + |
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Preference number: 4 (lower is better) Translates to: QPEEMGALGLPSFRRREPGKPGL*RRAAVG Trigger: CCCGACCGCAGCCCTCCTCCACAGCCCGGGCTTTCC...GGGTTCTCTGCGTCTAAAGCTGGGCAGGCCAAGAGCCCCCATCTCTTCAGGTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR GCA 90 bp | GGGGCCAGCCTCTCTGAGTTCACTCTGGATGATGCAGGAGCATGCGCCTATGAGGCTGTGGAGGAGGGCTaGGGTCGGGCGGTCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: GASLSEFTLDDAGACAYEAVEEG*GRAVSE Trigger: TTCTGAGACCGCCCGACCGCAGCCCTCCTCCACAGC...CTCATAGGCGCATGCTCCTGCATCATCCAGAGTGAACTCAGAGAGGCTGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR CCA 90 bp | GGGGCCAGCCTCTCTGAGTTCACTCTGGATGATGCAGGAGCATGCGCCTATGAGCACTTCGGGCGTCACTaGCTCCAGGCCCCAGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: GASLSEFTLDDAGACAYEHFGRH*LQAPGG Trigger: ACCTCCTGGGGCCTGGAGCCAGTGACGCCCGAAGTG...CTCATAGGCGCATGCTCCTGCATCATCCAGAGTGAACTCAGAGAGGCTGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR TCA 90 bp | GGAGGCAGAGGCAAAGGGGAAAATCTCTGTGCGCCTGAGACCAGCCTGGTCTACCGAATCCGGAGGAGCTaGGGTTGGCACTTCGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: GGRGKGENLCAPETSLVYRIRRS*GWHFGR Trigger: ACGCCCGAAGTGCCAACCTCAGCTCCTCCGGATTCG...GTAGACCAGGCTGGTCTCAGGCGCACAGAGATTTTCCCCTTTGCCTCTGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR GCA 90 bp | GGAGGCAGAGGCAAAGGGGAAAATCTCTGTGCGCCTGAGACCAGCCTGGTCTACCCAAAGACGGCAACGTaGTCCGGTCTGGGCCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: GGRGKGENLCAPETSLVYPKTAT*SGLGLP Trigger: CGGAAGGCCCAGACCGGAGCACGTTGCCGTCTTTGG...GTAGACCAGGCTGGTCTCAGGCGCACAGAGATTTTCCCCTTTGCCTCTGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR CCA 90 bp | ATGCAGGGGCCAGCCTCTCTGAGTTCACTCTGGATGATGCAGGAGCATGCGCCTGGCAGCATCCAGGGCTaGCTCCGAGGTGCAGCTACT | + |
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Preference number: 4 (lower is better) Translates to: MQGPASLSSLWMMQEHAPGSIQG*LRGAAT Trigger: AGTAGCTGCACCTCGGAGCCAGCCCTGGATGCTGCC...AGGCGCATGCTCCTGCATCATCCAGAGTGAACTCAGAGAGGCTGGCCCCTGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR GCA 90 bp | ATGCAGGGGCCAGCCTCTCTGAGTTCACTCTGGATGATGCAGGAGCATGCGCCTCCCACCGCTGCAGGCTaGCTCAGTAAGCTCACCACA | + |
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Preference number: 4 (lower is better) Translates to: MQGPASLSSLWMMQEHAPPTAAG*LSKLTT Trigger: TGTGGTGAGCTTACTGAGGCAGCCTGCAGCGGTGGG...AGGCGCATGCTCCTGCATCATCCAGAGTGAACTCAGAGAGGCTGGCCCCTGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR CCA 90 bp | CAACCTGAAGAGATGGGGGCTCTTGGCCTGCCCAGCTTTAGACGCAGAGAACCCCCCTCCTCTCTGGGCTaGGTCAGCGTTGCCAAAGAC | + |
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Preference number: 4 (lower is better) Translates to: QPEEMGALGLPSFRRREPPSSLG*VSVAKD Trigger: GTCTTTGGCAACGCTGACCCAGCCCAGAGAGGAGGG...GGGTTCTCTGCGTCTAAAGCTGGGCAGGCCAAGAGCCCCCATCTCTTCAGGTTG 60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR TCA 90 bp | CTGGAGGCAGAGGCAAAGGGGAAAATCTCTGTGCGCCTGAGACCAGCCTGGTCTAGGAGACCCCTGGCTTaGCAGTCAGGTTGGTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: LEAEAKGKISVRLRPAWSRRPLA*QSGWSV Trigger: GACAGACCAACCTGACTGTCAAGCCAGGGGTCTCCT...AGACCAGGCTGGTCTCAGGCGCACAGAGATTTTCCCCTTTGCCTCTGCCTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR TCA 90 bp | AGCACTAATGCAGGGGCCAGCCTCTCTGAGTTCACTCTGGATGATGCAGGAGCACGCTGCAGTCTCTGCTaGGGATCCTGGTCCACCCTC | + |
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Preference number: 4 (lower is better) Translates to: STNAGASLSEFTLDDAGARCSLC*GSWSTL Trigger: GAGGGTGGACCAGGATCCTCAGCAGAGACTGCAGCG...TGCTCCTGCATCATCCAGAGTGAACTCAGAGAGGCTGGCCCCTGCATTAGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR TCA 90 bp | CTGGAGGCAGAGGCAAAGGGGAAAATCTCTGTGCGCCTGAGACCAGCCTGGTCTTACTGGCCAGGTCCCTaGAGAAACGAGGACACGTTG | + |
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Preference number: 4 (lower is better) Translates to: LEAEAKGKISVRLRPAWSYWPGP*RNEDTL Trigger: CAACGTGTCCTCGTTTCTTCAGGGACCTGGCCAGTA...AGACCAGGCTGGTCTCAGGCGCACAGAGATTTTCCCCTTTGCCTCTGCCTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR GCA 90 bp | GATCCTGGCAAACACAACCTGAAGAGATGGGGGCTCTTGGCCTGCCCAGCTTTACTGGCCTCCGAACTCTaGAGCCAGGGCCTGGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: DPGKHNLKRWGLLACPALLASEL*SQGLEV Trigger: AACTTCCAGGCCCTGGCTGCAGAGTTCGGAGGCCAG...TAAAGCTGGGCAGGCCAAGAGCCCCCATCTCTTCAGGTTGTGTTTGCCAGGATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR GCA 90 bp | GTGCGCCTGAGACCAGCCTGGTCTACATTGGGAGTTCTAGGCCAACCAAGACGACCTCCTGCAAGTGGCTaGAGTTCACCTCTCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: VRLRPAWSTLGVLGQPRRPPASG*SSPLWV Trigger: GACCCAGAGAGGTGAACTGCAGCCACTTGCAGGAGG...TCGTCTTGGTTGGCCTAGAACTCCCAATGTAGACCAGGCTGGTCTCAGGCGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR GCA 90 bp | AGCACTAATGCAGGGGCCAGCCTCTCTGAGTTCACTCTGGATGATGCAGGAGCAGGGCTGGGTCAGCGTTaGCAAAGACGGCAACGTGCT | + |
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Preference number: 4 (lower is better) Translates to: STNAGASLSEFTLDDAGAGLGQR*QRRQRA Trigger: AGCACGTTGCCGTCTTTGGCAACGCTGACCCAGCCC...TGCTCCTGCATCATCCAGAGTGAACTCAGAGAGGCTGGCCCCTGCATTAGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR TCA 90 bp | CTTGGCCTGCCCAGCTTTAGACGCAGAGAACCCAGTGTGTATCTGGAGGTCCGAGCTTGTGGGTTGGACTaGAGTCCTAGATGTGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LGLPSFRRREPSVYLEVRACGLD*SPRCAH Trigger: GTGGGCACATCTAGGACTTCAGTCCAACCCACAAGC...TCGGACCTCCAGATACACACTGGGTTCTCTGCGTCTAAAGCTGGGCAGGCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| 3UTR CAA 72 bp | GATCCTGGCAAACACAACCTGAAGAGATGGGGGCTCTaGGCCTGCCCAGCTTTAGACGCAGAGAACCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: DPGKHNLKRWGL*ACPALDAENPV Trigger: CACTGGGTTCTCTGCGTCTAAAGCTGGGCAGGCCAAGAGCCCCCATCTCTTCAGGTTGTGTTTGCCAGGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR CCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGGGAAAGCCCGGGCTGTaGAGGAGGGCTGCGGTCGGG | + |
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Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVGKPGL*RRAAVG Trigger: CCCGACCGCAGCCCTCCTCCACAGCCCGGGCTTTCC...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
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| CDS-3UTR CCA 90 bp | TTTTCTAACTCAGGTCTGGGTAAAGGGTGTGGCTATAACTTTGGCAAAAGAGCCCCAGGCCCCAGGAGGTaGGGAAAGCCCGGGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: FSNSGLGKGCGYNFGKRAPGPRR*GKPGLW Trigger: CCACAGCCCGGGCTTTCCCCACCTCCTGGGGCCTGG...GGCTCTTTTGCCAAAGTTATAGCCACACCCTTTACCCAGACCTGAGTTAGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR CCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGCCAGGCCCCAGGAGGTaGGGAAAGCCCGGGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVPGPRR*GKPGLW Trigger: CCACAGCCCGGGCTTTCCCCACCTCCTGGGGCCTGG...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
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| CDS-3UTR CCA 90 bp | CTGGAGGCAGAGGCAAAGGGGAAAATCTCTGTGCGCCTGAGACCAGCCTGGTCTGATCTCCAGGGACACTaGTATCAGACAGCAGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: LEAEAKGKISVRLRPAWSDLQGH*YQTAGS Trigger: ACTTCCTGCTGTCTGATACCAGTGTCCCTGGAGATC...AGACCAGGCTGGTCTCAGGCGCACAGAGATTTTCCCCTTTGCCTCTGCCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR TCA 90 bp | ATCCAGCACTCTGGAGGCAGAGGCAAAGGGGAAAATCTCTGTGCGCCTGAGACCAACAGGGTCATCGAGTaGCTTGTGTCACCAGTTAGC | + |
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Preference number: 4 (lower is better) Translates to: IQHSGGRGKGENLCAPETNRVIE*LVSPVS Trigger: GCTAACTGGTGACACAAGTCACTCGATGACCCTGTT...GGTCTCAGGCGCACAGAGATTTTCCCCTTTGCCTCTGCCTCCAGAGTGCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR GCA 90 bp | CTGGAGGCAGAGGCAAAGGGGAAAATCTCTGTGCGCCTGAGACCAGCCTGGTCTGGCCTGGAAGTTGGTTaGATTGACTGTTTGGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: LEAEAKGKISVRLRPAWSGLEVG*IDCLEL Trigger: AAGCTCCAAACAGTCAATGCAACCAACTTCCAGGCC...AGACCAGGCTGGTCTCAGGCGCACAGAGATTTTCCCCTTTGCCTCTGCCTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR CCA 90 bp | GTGCGCCTGAGACCAGCCTGGTCTACATTGGGAGTTCTAGGCCAACCAAGACGAGGAGGCTCTGGCTTCTaGGTAATGTCCACAAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: VRLRPAWSTLGVLGQPRRGGSGF*VMSTKF Trigger: GAACTTTGTGGACATTACCCAGAAGCCAGAGCCTCC...TCGTCTTGGTTGGCCTAGAACTCCCAATGTAGACCAGGCTGGTCTCAGGCGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR TCA 90 bp | CAACCTGAAGAGATGGGGGCTCTTGGCCTGCCCAGCTTTAGACGCAGAGAACCCTGGGAAACGATATTCTaGCATGTGTTTCCAGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: QPEEMGALGLPSFRRREPWETIF*HVFPAN Trigger: GTTGGCTGGAAACACATGTCAGAATATCGTTTCCCA...GGGTTCTCTGCGTCTAAAGCTGGGCAGGCCAAGAGCCCCCATCTCTTCAGGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR GCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGGCTGTGGAGGAGGGCTaGGGTCGGGCGGTCTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVAVEEG*GRAVSE Trigger: TTCTGAGACCGCCCGACCGCAGCCCTCCTCCACAGC...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
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| CDS-3UTR GCA 90 bp | ATCCAGCACTCTGGAGGCAGAGGCAAAGGGGAAAATCTCTGTGCGCCTGAGACCCACTCCAAACTGTACTaGGTGTCTCTTAGCAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: IQHSGGRGKGENLCAPETHSKLY*VSLSRA Trigger: TGCTCTGCTAAGAGACACGCAGTACAGTTTGGAGTG...GGTCTCAGGCGCACAGAGATTTTCCCCTTTGCCTCTGCCTCCAGAGTGCTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| 3UTR CAA 72 bp | AGACAAAACACAGAGCCAGCAGTTTCCCGGCTTGAATaGTCAGCACTAATGCAGGGGCCAGCCTCTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: RQNTEPAVSRLE*SALMQGPASLS Trigger: ACTCAGAGAGGCTGGCCCCTGCATTAGTGCTGACAATTCAAGCCGGGAAACTGCTGGCTCTGTGTTTTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR TCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGCGAATCCGGAGGAGCTaGGGTTGGCACTTCGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVRIRRS*GWHFGR Trigger: ACGCCCGAAGTGCCAACCTCAGCTCCTCCGGATTCG...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
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| CDS-3UTR TCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGCGCTGCAGTCTCTGCTaGGGATCCTGGTCCACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVRCSLC*GSWSTL Trigger: GAGGGTGGACCAGGATCCTCAGCAGAGACTGCAGCG...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGCCTGCCCAGCTTTAGACGCAGAGAACCCAGTGTGTATCTGGAGGTCCGAGTAAGACACACAGGATaGGAACGAGAGAGTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGLPSFRRREPSVYLEVRVRHTG*ERESLS Trigger: AGAAAGACTCTCTCGTTCTCATCCTGTGTGTCTTAC...TCGGACCTCCAGATACACACTGGGTTCTCTGCGTCTAAAGCTGGGCAGGCCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
||
| CDS-3UTR GCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGCCAAAGACGGCAACGTaGTCCGGTCTGGGCCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVPKTAT*SGLGLP Trigger: CGGAAGGCCCAGACCGGAGCACGTTGCCGTCTTTGG...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
||
| CDS-3UTR CCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGGGCAGCATCCAGGGCTaGCTCCGAGGTGCAGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVGSIQG*LRGAAT Trigger: AGTAGCTGCACCTCGGAGCCAGCCCTGGATGCTGCC...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
||
| CDS-3UTR TCA 90 bp | GATCCTGGCAAACACAACCTGAAGAGATGGGGGCTCTTGGCCTGCCCAGCTTTACACACATACCCAACTTaGAGATCTTACACTACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DPGKHNLKRWGLLACPALHTYPT*RSYTTR Trigger: CCTGGTAGTGTAAGATCTTCAAGTTGGGTATGTGTG...TAAAGCTGGGCAGGCCAAGAGCCCCCATCTCTTCAGGTTGTGTTTGCCAGGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
||
| CDS-3UTR TCA 90 bp | AACTCAGGTCTGGGTAAAGGGTGTGGCTATAACTTTGGCAAAAGAGCCAGACAAAGAGTGGCTTCCCAGTaGGGTAGCCAGGATTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NSGLGKGCGYNFGKRARQRVASQ*GSQDSH Trigger: GTGGGAATCCTGGCTACCTCACTGGGAAGCCACTCT...TTGTCTGGCTCTTTTGCCAAAGTTATAGCCACACCCTTTACCCAGACCTGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
||
| CDS-3UTR GCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGCCCACCGCTGCAGGCTaGCTCAGTAAGCTCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVPTAAG*LSKLTT Trigger: TGTGGTGAGCTTACTGAGGCAGCCTGCAGCGGTGGG...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
||
| CDS-3UTR GCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGGGGCTGGGTCAGCGTTaGCAAAGACGGCAACGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVGLGQR*QRRQRA Trigger: AGCACGTTGCCGTCTTTGGCAACGCTGACCCAGCCC...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
||
| CDS-3UTR CCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGCCCTCCTCTCTGGGCTaGGTCAGCGTTGCCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVPSSLG*VSVAKD Trigger: GTCTTTGGCAACGCTGACCCAGCCCAGAGAGGAGGG...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
||
| CDS-3UTR TCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGAGGAGACCCCTGGCTTaGCAGTCAGGTTGGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVRRPLA*QSGWSV Trigger: GACAGACCAACCTGACTGTCAAGCCAGGGGTCTCCT...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
||
| CDS-3UTR TCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGAGAGTGGCTTCCCAGTaGGGTAGCCAGGATTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVRVASQ*GSQDSH Trigger: GTGGGAATCCTGGCTACCTCACTGGGAAGCCACTCT...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
||
| CDS-3UTR GCA 90 bp | AGCACTAATGCAGGGGCCAGCCTCTCTGAGTTCACTCTGGATGATGCAGGAGCAAACGAGGACACGTTGTaGTTTTACTCTCTAGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: STNAGASLSEFTLDDAGANEDTL*FYSLGN Trigger: GTTTCCTAGAGAGTAAAAGCACAACGTGTCCTCGTT...TGCTCCTGCATCATCCAGAGTGAACTCAGAGAGGCTGGCCCCTGCATTAGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
||
| CDS-3UTR GCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGCCTCCTGCAAGTGGCTaGAGTTCACCTCTCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVPPASG*SSPLWV Trigger: GACCCAGAGAGGTGAACTGCAGCCACTTGCAGGAGG...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
||
| CDS-3UTR CCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGCGAGCCACCAGGCAGTaGTGGCTTCCTTCCTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVRATRQ*WLPSLL Trigger: CAGTAAGGAAGGAAGCCACCACTGCCTGGTGGCTCG...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
||
| CDS-3UTR TCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGTACTGGCCAGGTCCCTaGAGAAACGAGGACACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVYWPGP*RNEDTL Trigger: CAACGTGTCCTCGTTTCTTCAGGGACCTGGCCAGTA...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
||
| CDS-3UTR CCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGATTGAAGGGAAGGACTaGCCTCCGAACTCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVIEGKD*PPNSAA Trigger: GGCTGCAGAGTTCGGAGGCCAGTCCTTCCCTTCAAT...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTAACTCAGGTCTGGGTAAAGGGTGTGGCTATAACTTTGGCAAAAGAGCCTGTGCCCACAACACCTaGATCTCCAGGGACACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSNSGLGKGCGYNFGKRACAHNT*ISRDTG Trigger: ACCAGTGTCCCTGGAGATCCAGGTGTTGTGGGCACA...GGCTCTTTTGCCAAAGTTATAGCCACACCCTTTACCCAGACCTGAGTTAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| 3UTR CAA 72 bp | CTAACTCAGGTCTGGGTAAAGGGTGTGGCTATAACTTaGGCAAAAGAGCCAGACAAAACACAGAGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTQVWVKGVAIT*AKEPDKTQSQQ Trigger: CTGCTGGCTCTGTGTTTTGTCTGGCTCTTTTGCCAAAGTTATAGCCACACCCTTTACCCAGACCTGAGTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
||
| CDS-3UTR TCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGGGCTTCCTTCCTTACTaGAACGCTGCAGTCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVGFLPY*NAAVSA Trigger: AGCAGAGACTGCAGCGTTTCAGTAAGGAAGGAAGCC...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
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| CDS-3UTR CCA 90 bp | GGACGCCATTCACTTTGGGAAACGAGTAGAAAGAACTACTTTTCTAACTCAGGTATTGAAGGGAAGGACTaGCCTCCGAACTCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRHSLWETSRKNYFSNSGIEGKD*PPNSAA Trigger: GGCTGCAGAGTTCGGAGGCCAGTCCTTCCCTTCAAT...ACCTGAGTTAGAAAAGTAGTTCTTTCTACTCGTTTCCCAAAGTGAATGGCGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR TCA 90 bp | AACAGAAGAGAGCTCTCAGTCACTTCTATTACACCACACCACAAAGTAGGGGAGGGAAGTTGGTTGCATTaGCTGTTTGGAGCTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NRRELSVTSITPHHKVGEGSWLH*LFGASG Trigger: TCCAGAAGCTCCAAACAGTCAATGCAACCAACTTCC...CTCCCCTACTTTGTGGTGTGGTGTAATAGAAGTGACTGAGAGCTCTCTTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
||
| CDS-3UTR TCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGAACAGGGTCATCGAGTaGCTTGTGTCACCAGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVNRVIE*LVSPVS Trigger: GCTAACTGGTGACACAAGTCACTCGATGACCCTGTT...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
||
| CDS-3UTR TCA 90 bp | AACTCAGGTCTGGGTAAAGGGTGTGGCTATAACTTTGGCAAAAGAGCCAGACAATGCTCAACGCCGCTTTaGAGGGAAAGAAGAAATCGA | + |
|
Preference number: 4 (lower is better) Translates to: NSGLGKGCGYNFGKRARQCSTPL*RERRNR Trigger: TCGATTTCTTCTTTCCCTTCAAAGCGGCGTTGAGCA...TTGTCTGGCTCTTTTGCCAAAGTTATAGCCACACCCTTTACCCAGACCTGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| 3UTR CAA 72 bp | AAAGTAGGGGAGGACAGAAAGGACTGGTGGAGTCATTaGCTAGTGAGAAAAGGACATAGGACGCCATTCACT | + |
|
Preference number: 4 (lower is better) Translates to: KVGEDRKDWWSH*LVRKGHRTPFT Trigger: AGTGAATGGCGTCCTATGTCCTTTTCTCACTAGCAAATGACTCCACCAGTCCTTTCTGTCCTCCCCTACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR GCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGGGCCTGGAAGTTGGTTaGATTGACTGTTTGGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVGLEVG*IDCLEL Trigger: AAGCTCCAAACAGTCAATGCAACCAACTTCCAGGCC...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
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| CDS-3UTR GCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGCACTCCAAACTGTACTaGGTGTCTCTTAGCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVHSKLY*VSLSRA Trigger: TGCTCTGCTAAGAGACACGCAGTACAGTTTGGAGTG...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
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| CDS-3UTR CCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGTCCCAAAGGTCCCATTaGTCTCTATCTCGTAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVSQRSH*SLSRRR Trigger: TCGTCTACGAGATAGAGACCAATGGGACCTTTGGGA...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
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| CDS-3UTR TCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGCACACATACCCAACTTaGAGATCTTACACTACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVHTYPT*RSYTTR Trigger: CCTGGTAGTGTAAGATCTTCAAGTTGGGTATGTGTG...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
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| CDS-3UTR TCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGTGGGAAACGATATTCTaGCATGTGTTTCCAGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVWETIF*HVFPAN Trigger: GTTGGCTGGAAACACATGTCAGAATATCGTTTCCCA...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
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| CDS-3UTR TCA 90 bp | CACAAAGTAGGGGAGGACAGAAAGGACTGGTGGAGTCATTTGCTAGTGAGAAAATGGAACTTCATATTCTaGAGATCAGTCACACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HKVGEDRKDWWSHLLVRKWNFIF*RSVTPL Trigger: AAGAGGTGTGACTGATCTTCAGAATATGAAGTTCCA...TTTTCTCACTAGCAAATGACTCCACCAGTCCTTTCTGTCCTCCCCTACTTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR GCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGAACGAGGACACGTTGTaGTTTTACTCTCTAGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVNEDTL*FYSLGN Trigger: GTTTCCTAGAGAGTAAAAGCACAACGTGTCCTCGTT...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
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| CDS-3UTR CCA 90 bp | ACTACTTTTCTAACTCAGGTCTGGGTAAAGGGTGTGGCTATAACTTTGGCAAAACATGAGCTTGTGGGTTaGACTGAAGTCCTAGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: TTFLTQVWVKGVAITLAKHELVG*TEVLDV Trigger: CACATCTAGGACTTCAGTCCAACCCACAAGCTCATG...TTTTGCCAAAGTTATAGCCACACCCTTTACCCAGACCTGAGTTAGAAAAGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
||
| CDS-3UTR TCA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGTGGAACTTCATATTCTaGAGATCAGTCACACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SKESRLDRGVTRNTDHEVWNFIF*RSVTPL Trigger: AAGAGGTGTGACTGATCTTCAGAATATGAAGTTCCA...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
||
| CDS-3UTR CCA 90 bp | AAACCTCATATACATAAAAATCCTCAGGGTGTCTATCATGAGGTGTCAACTTCTTCCCAAAGGTCCCATTaGTCTCTATCTCGTAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: KPHIHKNPQGVYHEVSTSSQRSH*SLSRRR Trigger: TCGTCTACGAGATAGAGACCAATGGGACCTTTGGGA...AGAAGTTGACACCTCATGATAGACACCCTGAGGATTTTTATGTATATGAGGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
||
| 3UTR CAA 72 bp | ATGAGGACCTATTTAGCCAAGATAAGTAGGCTGTCTTaGTTTCCCATAGGGAAAAATGAAACCGGATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MRTYLAKISRLS*FPIGKNETGFF Trigger: AAAGAATCCGGTTTCATTTTTCCCTATGGGAAACAAAGACAGCCTACTTATCTTGGCTAAATAGGTCCTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS CCA 90 bp | GCGTCACTGGCTCCAGGCCCCAGGAGGTGGGGAAAGCCCGGGCTGTaGAGGAGGGCTGCGGTCGGGCGGTCTCAGAAAGCATCAGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: ASLAPGPRRWGKPGL*RRAAVGRSQKASGP Trigger: TGGTCCTGATGCTTTCTGAGACCGCCCGACCGCAGCCCTCCTCCACAGCCCGGGCTTTCCCCACCTCCTGGGGCCTGGAGCCAGTGACGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
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| CDS CCA 90 bp | GAAACGCTGCAGTCTCTGCTGAGGATCCTGGTCCACCCTCCTCTCTaGGCTGGGTCAGCGTTGCCAAAGACGGCAACGTGCTCCGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ETLQSLLRILVHPPL*AGSALPKTATCSGL Trigger: CAGACCGGAGCACGTTGCCGTCTTTGGCAACGCTGACCCAGCCCAGAGAGGAGGGTGGACCAGGATCCTCAGCAGAGACTGCAGCGTTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025981.15 ENSMUST00000135795.8 |
||
| CDS CCA 90 bp | TCTGGGCTGGGTCAGCGTTGCCAAAGACGGCAACGTGCTCCGGTCTaGGCCTTCCGTGCAGAGTCTGATAAACCTCCTCCTGCAAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SGLGQRCQRRQRAPV*AFRAESDKPPPASG Trigger: GCCACTTGCAGGAGGAGGTTTATCAGACTCTGCACGGAAGGCCCAGACCGGAGCACGTTGCCGTCTTTGGCAACGCTGACCCAGCCCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025981.15 ENSMUST00000135795.8 |
||
| CDS TCA 90 bp | AGGCAGTGGTGGCTTCCTTCCTTACTGAAACGCTGCAGTCTCTGCTaGGGATCCTGGTCCACCCTCCTCTCTGGGCTGGGTCAGCGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RQWWLPSLLKRCSLC*GSWSTLLSGLGQRC Trigger: GCAACGCTGACCCAGCCCAGAGAGGAGGGTGGACCAGGATCCTCAGCAGAGACTGCAGCGTTTCAGTAAGGAAGGAAGCCACCACTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
||
| CDS TCA 90 bp | TCGAGTGACTTGTGTCACCAGTTAGCACTAAGAGTGGCTTCCCAGTaGGGTAGCCAGGATTCCCACTTCTCGGAGCAGCAGGAGCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SSDLCHQLALRVASQ*GSQDSHFSEQQEQR Trigger: CCGCTGCTCCTGCTGCTCCGAGAAGTGGGAATCCTGGCTACCTCACTGGGAAGCCACTCTTAGTGCTAACTGGTGACACAAGTCACTCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025981.15 ENSMUST00000135795.8 |
||
| CDS CCA 90 bp | GAGTCAAGTCACAGACACAGATCGGTAAAGCTGGAAAGGGGTCGGTaGTCGCGTTCACGGGCATCGATAGAGTCCAGGGAGTCGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: ESSHRHRSVKLERGR*SRSRASIESRESDS Trigger: AGAGTCCGACTCCCTGGACTCTATCGATGCCCGTGAACGCGACCACCGACCCCTTTCCAGCTTTACCGATCTGTGTCTGTGACTTGACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
||
| CDS-3UTR CAA 90 bp | AGCACTAATGCAGGGGCCAGCCTCTCTGAGTTCACTCTGGATGATGCAGGAGCAGGGTTTCTGGTGGCATaGAAGGGAAGGACTGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: STNAGASLSEFTLDDAGAGFLVA*KGRTGL Trigger: GAGGCCAGTCCTTCCCTTCAATGCCACCAGAAACCC...TGCTCCTGCATCATCCAGAGTGAACTCAGAGAGGCTGGCCCCTGCATTAGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
||
| CDS GCA 90 bp | TGGGCCTTCCGTGCAGAGTCTGATAAACCTCCTCCTGCAAGTGGCTaGAGTTCACCTCTCTGGGTCTTAACTGGCACCCAGATACTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: WAFRAESDKPPPASG*SSPLWVLTGTQILR Trigger: ACGCAGTATCTGGGTGCCAGTTAAGACCCAGAGAGGTGAACTGCAGCCACTTGCAGGAGGAGGTTTATCAGACTCTGCACGGAAGGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025981.15 ENSMUST00000135795.8 |
||
| CDS CCA 90 bp | TGCATTGGTACAGGAATCTGGCTCCGGCCACATGAGCTTGTGGGTTaGACTGAAGTCCTAGATGTGCCCACAACACCTGGATCTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CIGTGIWLRPHELVG*TEVLDVPTTPGSPG Trigger: CCCTGGAGATCCAGGTGTTGTGGGCACATCTAGGACTTCAGTCCAACCCACAAGCTCATGTGGCCGGAGCCAGATTCCTGTACCAATGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
||
| CDS TCA 90 bp | GCAGAGCAAAGCCCATTACCCTCGCTCTGCAACAGGGTCATCGAGTaGCTTGTGTCACCAGTTAGCACTAAGAGTGGCTTCCCAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: AEQSPLPSLCNRVIE*LVSPVSTKSGFPVR Trigger: CCTCACTGGGAAGCCACTCTTAGTGCTAACTGGTGACACAAGTCACTCGATGACCCTGTTGCAGAGCGAGGGTAATGGGCTTTGCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025981.15 ENSMUST00000135795.8 |
||
| CDS CCA 90 bp | AACCTTCAAGACTCTGAAGTTATAGTAAGAGGCAGCATCCAGGGCTaGCTCCGAGGTGCAGCTACTGGCCAGGTCCCTGAAGAAACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NLQDSEVIVRGSIQG*LRGAATGQVPEETR Trigger: CCTCGTTTCTTCAGGGACCTGGCCAGTAGCTGCACCTCGGAGCCAGCCCTGGATGCTGCCTCTTACTATAACTTCAGAGTCTTGAAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
||
| CDS CCA 90 bp | ACCTCCTCCTGCAAGTGGCTGCAGTTCACCTCTCTGGGTCTTAACTaGCACCCAGATACTGCGTTCACTCCAAACTGTACTGCGTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TSSCKWLQFTSLGLN*HPDTAFTPNCTACL Trigger: GAGACACGCAGTACAGTTTGGAGTGAACGCAGTATCTGGGTGCCAGTTAAGACCCAGAGAGGTGAACTGCAGCCACTTGCAGGAGGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025981.15 ENSMUST00000135795.8 |
||
| CDS CCA 90 bp | GGCCCCTCTGCTCAACGCCGCTTTGAAGGGAAAGAAGAAATCGAATaGCAGCTTCCAGTCTATTCTGGGTTGATCCCTAGGAGGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GPSAQRRFEGKEEIE*QLPVYSGLIPRRLW Trigger: CCAGAGCCTCCTAGGGATCAACCCAGAATAGACTGGAAGCTGCCATTCGATTTCTTCTTTCCCTTCAAAGCGGCGTTGAGCAGAGGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
||
| CDS-3UTR CAA 90 bp | CAACCTGAAGAGATGGGGGCTCTTGGCCTGCCCAGCTTTAGACGCAGAGAACCCTGCTCCTGTACAGACTaGCATTGGTACAGGAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: QPEEMGALGLPSFRRREPCSCTD*HWYRNL Trigger: CAGATTCCTGTACCAATGCAAGTCTGTACAGGAGCA...GGGTTCTCTGCGTCTAAAGCTGGGCAGGCCAAGAGCCCCCATCTCTTCAGGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
||
| CDS TCA 90 bp | CGAGAGAGTCTTTCTGCACACTGGCCCCTCTGCTCAACGCCGCTTTaGAGGGAAAGAAGAAATCGAATGGCAGCTTCCAGTCTATTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RESLSAHWPLCSTPL*RERRNRMAASSLFW Trigger: CCAGAATAGACTGGAAGCTGCCATTCGATTTCTTCTTTCCCTTCAAAGCGGCGTTGAGCAGAGGGGCCAGTGTGCAGAAAGACTCTCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
||
| CDS CCA 90 bp | TTCCTCTCTGGTGCTCCTGTACAGACTTGCATTGGTACAGGAATCTaGCTCCGGCCACATGAGCTTGTGGGTTGGACTGAAGTCCTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FLSGAPVQTCIGTGI*LRPHELVGWTEVLD Trigger: ATCTAGGACTTCAGTCCAACCCACAAGCTCATGTGGCCGGAGCCAGATTCCTGTACCAATGCAAGTCTGTACAGGAGCACCAGAGAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
||
| CDS-3UTR CAA 90 bp | GGAGGCAGAGGCAAAGGGGAAAATCTCTGTGCGCCTGAGACCAGCCTGGTCTACGGAAATAGTTTGCTTTaGAGTTGTTCACACGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: GGRGKGENLCAPETSLVYGNSLL*SCSHGH Trigger: GTGTCCGTGTGAACAACTCAAAAGCAAACTATTTCC...GTAGACCAGGCTGGTCTCAGGCGCACAGAGATTTTCCCCTTTGCCTCTGCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS GCA 90 bp | AGTCCAAGTAGTAAGACACACAGGATGAGAACGAGAGAGTCTTTCTaGACACTGGCCCCTCTGCTCAACGCCGCTTTGAAGGGAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPSSKTHRMRTRESF*TLAPLLNAALKGKK Trigger: CTTCTTTCCCTTCAAAGCGGCGTTGAGCAGAGGGGCCAGTGTGCAGAAAGACTCTCTCGTTCTCATCCTGTGTGTCTTACTACTTGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
||
| CDS GCA 90 bp | TCGTCAAAGATACTTCTATTCCTCTCTGGTGCTCCTGTACAGACTTaGATTGGTACAGGAATCTGGCTCCGGCCACATGAGCTTGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSKILLFLSGAPVQT*IGTGIWLRPHELVG Trigger: ACCCACAAGCTCATGTGGCCGGAGCCAGATTCCTGTACCAATGCAAGTCTGTACAGGAGCACCAGAGAGGAATAGAAGTATCTTTGACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
||
| CDS CCA 90 bp | GGGAAACGATATTCTGACATGTGTTTCCAGCCAACAGAGGAGGGCTaGCTTGTGAGGCAAGCGTCACAGGAACCTGGAACTTCATATTCT | + |
|
Preference number: 5 (lower is better) Translates to: GKRYSDMCFQPTEEG*LVRQASQEPGTSYS Trigger: AGAATATGAAGTTCCAGGTTCCTGTGACGCTTGCCTCACAAGCCAGCCCTCCTCTGTTGGCTGGAAACACATGTCAGAATATCGTTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
||
| CDS-3UTR CAA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGGGGTTTCTGGTGGCATaGAAGGGAAGGACTGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SKESRLDRGVTRNTDHEVGFLVA*KGRTGL Trigger: GAGGCCAGTCCTTCCCTTCAATGCCACCAGAAACCC...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
||
| CDS CCA 90 bp | GAATGGCAGCTTCCAGTCTATTCTGGGTTGATCCCTAGGAGGCTCTaGCTTCTGGGTAATGTCCACAAAGTTCACAAGAGTCGTCAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: EWQLPVYSGLIPRRL*LLGNVHKVHKSRQR Trigger: TCTTTGACGACTCTTGTGAACTTTGTGGACATTACCCAGAAGCCAGAGCCTCCTAGGGATCAACCCAGAATAGACTGGAAGCTGCCATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
||
| CDS-3UTR CAA 90 bp | TTTCTAACTCAGGTCTGGGTAAAGGGTGTGGCTATAACTTTGGCAAAAGAGCCAGCCAGGGCCTGGAAGTaGGTTGCATTGACTGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: FLTQVWVKGVAITLAKEPARAWK*VALTVW Trigger: CCAAACAGTCAATGCAACCAACTTCCAGGCCCTGGC...TGGCTCTTTTGCCAAAGTTATAGCCACACCCTTTACCCAGACCTGAGTTAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
||
| CDS-3UTR CAA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGGCCAGGGCCTGGAAGTaGGTTGCATTGACTGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SKESRLDRGVTRNTDHEVARAWK*VALTVW Trigger: CCAAACAGTCAATGCAACCAACTTCCAGGCCCTGGC...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
||
| CDS-3UTR CAA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGAAGGAGACCCCTGGCTaGACAGTCAGGTTGGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SKESRLDRGVTRNTDHEVKETPG*TVRLVC Trigger: ACAGACCAACCTGACTGTCAAGCCAGGGGTCTCCTT...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
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| CDS TCA 90 bp | AAGGGAAAGAAGAAATCGAATGGCAGCTTCCAGTCTATTCTGGGTTaGTCCCTAGGAGGCTCTGGCTTCTGGGTAATGTCCACAAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KGKKKSNGSFQSILG*SLGGSGFWVMSTKF Trigger: GAACTTTGTGGACATTACCCAGAAGCCAGAGCCTCCTAGGGATCAACCCAGAATAGACTGGAAGCTGCCATTCGATTTCTTCTTTCCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS GCA 90 bp | ACAAAGTTCACAAGAGTCGTCAAAGATACTTCTATTCCTCTCTGGTaGTCCTGTACAGACTTGCATTGGTACAGGAATCTGGCTCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TKFTRVVKDTSIPLW*SCTDLHWYRNLAPA Trigger: GGCCGGAGCCAGATTCCTGTACCAATGCAAGTCTGTACAGGAGCACCAGAGAGGAATAGAAGTATCTTTGACGACTCTTGTGAACTTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
||
| CDS TCA 90 bp | CTGGCTTGTGAGGCAAGCGTCACAGGAACCTGGAACTTCATATTCTaGAGATCAGTCACACCTCTTGGAACCTTCAAGACTCTGAAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LACEASVTGTWNFIF*RSVTPLGTFKTLKL Trigger: TAACTTCAGAGTCTTGAAGGTTCCAAGAGGTGTGACTGATCTTCAGAATATGAAGTTCCAGGTTCCTGTGACGCTTGCCTCACAAGCCAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
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| CDS CCA 90 bp | TCCACAAAGTTCACAAGAGTCGTCAAAGATACTTCTATTCCTCTCTaGTGCTCCTGTACAGACTTGCATTGGTACAGGAATCTGGCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: STKFTRVVKDTSIPL*CSCTDLHWYRNLAP Trigger: CGGAGCCAGATTCCTGTACCAATGCAAGTCTGTACAGGAGCACCAGAGAGGAATAGAAGTATCTTTGACGACTCTTGTGAACTTTGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
||
| CDS-3UTR CAA 90 bp | TACTTTTCTAACTCAGGTCTGGGTAAAGGGTGTGGCTATAACTTTGGCAAAAGAAAGGAGACCCCTGGCTaGACAGTCAGGTTGGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: YFSNSGLGKGCGYNFGKRKETPG*TVRLVC Trigger: ACAGACCAACCTGACTGTCAAGCCAGGGGTCTCCTT...TCTTTTGCCAAAGTTATAGCCACACCCTTTACCCAGACCTGAGTTAGAAAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR CAA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGTGGAAGTTGGTTGCATaGACTGTTTGGAGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SKESRLDRGVTRNTDHEVWKLVA*TVWSFW Trigger: CCAGAAGCTCCAAACAGTCAATGCAACCAACTTCCA...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
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| CDS CCA 90 bp | CACAGGAACCTGGAACTTCATATTCTGAAGATCAGTCACACCTCTTaGAACCTTCAAGACTCTGAAGTTATAGTAAGAGGCAGCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRNLELHILKISHTS*NLQDSEVIVRGSIQ Trigger: CTGGATGCTGCCTCTTACTATAACTTCAGAGTCTTGAAGGTTCCAAGAGGTGTGACTGATCTTCAGAATATGAAGTTCCAGGTTCCTGTG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
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| CDS-3UTR CAA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGCCACACATACCCAACTaGAAGATCTTACACTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SKESRLDRGVTRNTDHEVPHIPN*KILHYQ Trigger: CTGGTAGTGTAAGATCTTCAAGTTGGGTATGTGTGG...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
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| CDS-3UTR CAA 90 bp | CTCAGTCACTTCTATTACACCACACCACAAAGTAGGGGAGGACAGAAAGGACTGGCTTCTGGAAATAGTTaGCTTTTGAGTTGTTCACAC | + |
|
Preference number: 5 (lower is better) Translates to: LSHFYYTTPQSRGGQKGLASGNS*LLSCSH Trigger: GTGTGAACAACTCAAAAGCAAACTATTTCCAGAAGC...CAGTCCTTTCTGTCCTCCCCTACTTTGTGGTGTGGTGTAATAGAAGTGACTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR CAA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGAGAAACGAGGACACGTaGTGCTTTTACTCTCTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SKESRLDRGVTRNTDHEVRNEDT*CFYSLG Trigger: TCCTAGAGAGTAAAAGCACAACGTGTCCTCGTTTCT...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
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| CDS-3UTR CAA 90 bp | TACTTTTCTAACTCAGGTCTGGGTAAAGGGTGTGGCTATAACTTTGGCAAAAGACTGCTCAACGCCGCTTaGAAGGGAAAGAAGAAATCG | + |
|
Preference number: 5 (lower is better) Translates to: YFSNSGLGKGCGYNFGKRLLNAA*KGKKKS Trigger: CGATTTCTTCTTTCCCTTCAAAGCGGCGTTGAGCAG...TCTTTTGCCAAAGTTATAGCCACACCCTTTACCCAGACCTGAGTTAGAAAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS CCA 90 bp | TTGAAGATCTTACACTACCAGGAAGACAGAAGGAAAAGACTGTTCTaGGATGGAGAAGATCGCAGTCCTTGTCACAGCAGCAGTTTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LKILHYQEDRRKRLF*DGEDRSPCHSSSLN Trigger: ATTTAAACTGCTGCTGTGACAAGGACTGCGATCTTCTCCATCCCAGAACAGTCTTTTCCTTCTGTCTTCCTGGTAGTGTAAGATCTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
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| CDS-3UTR CAA 90 bp | AGTAAGGAAAGCAGATTAGACAGAGGTGTAACCAGAAATACGGACCACGAAGTGGGAAATAGTTTGCTTTaGAGTTGTTCACACGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: SKESRLDRGVTRNTDHEVGNSLL*SCSHGH Trigger: GTGTCCGTGTGAACAACTCAAAAGCAAACTATTTCC...CACTTCGTGGTCCGTATTTCTGGTTACACCTCTGTCTAATCTGCTTTCCTTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
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| CDS-3UTR CAA 90 bp | GGACGCCATTCACTTTGGGAAACGAGTAGAAAGAACTACTTTTCTAACTCAGGTAGAAACGAGGACACGTaGTGCTTTTACTCTCTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GRHSLWETSRKNYFSNSGRNEDT*CFYSLG Trigger: TCCTAGAGAGTAAAAGCACAACGTGTCCTCGTTTCT...ACCTGAGTTAGAAAAGTAGTTCTTTCTACTCGTTTCCCAAAGTGAATGGCGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR CAA 90 bp | ACTACTTTTCTAACTCAGGTCTGGGTAAAGGGTGTGGCTATAACTTTGGCAAAACCACACATACCCAACTaGAAGATCTTACACTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: TTFLTQVWVKGVAITLAKPHIPN*KILHYQ Trigger: CTGGTAGTGTAAGATCTTCAAGTTGGGTATGTGTGG...TTTTGCCAAAGTTATAGCCACACCCTTTACCCAGACCTGAGTTAGAAAAGTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS-3UTR CAA 90 bp | TTCCTTTTCGTTAGGTCCTGTTTCCCTAAATTCCCTCCTATAATCATGAGTAATTGGAAGTTGGTTGCATaGACTGTTTGGAGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FLFVRSCFPKFPPIIMSNWKLVA*TVWSFW Trigger: CCAGAAGCTCCAAACAGTCAATGCAACCAACTTCCA...ATTACTCATGATTATAGGAGGGAATTTAGGGAAACAGGACCTAACGAAAAGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS TCA 72 bp | CCAGGGAGTCGGACTCTCAGACGAATCCGGAGGAGCTaGGGTTGGCACTTCGGGCGTCACTGGCTCCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PGSRTLRRIRRS*GWHFGRHWLQA Trigger: GGCCTGGAGCCAGTGACGCCCGAAGTGCCAACCTCAGCTCCTCCGGATTCGTCTGAGAGTCCGACTCCCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
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| CDS GCA 72 bp | TCCTGGTCCACCCTCCTCTCTGGGCTGGGTCAGCGTTaGCAAAGACGGCAACGTGCTCCGGTCTGGGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SWSTLLSGLGQR*QRRQRAPVWAF Trigger: GAAGGCCCAGACCGGAGCACGTTGCCGTCTTTGGCAACGCTGACCCAGCCCAGAGAGGAGGGTGGACCAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025981.15 ENSMUST00000135795.8 |
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| CDS CAA 72 bp | GAGTCGGACTCTCAGACGAATCCGGAGGAGCTGAGGTaGGCACTTCGGGCGTCACTGGCTCCAGGCCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ESDSQTNPEELR*ALRASLAPGPR Trigger: CCTGGGGCCTGGAGCCAGTGACGCCCGAAGTGCCAACCTCAGCTCCTCCGGATTCGTCTGAGAGTCCGACTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
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| CDS CCA 72 bp | GGCGGCTGGGTTTCTGGTGGCATTGAAGGGAAGGACTaGCCTCCGAACTCTGCAGCCAGGGCCTGGAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GGWVSGGIEGKD*PPNSAARAWKL Trigger: CAACTTCCAGGCCCTGGCTGCAGAGTTCGGAGGCCAGTCCTTCCCTTCAATGCCACCAGAAACCCAGCCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
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| CDS CCA 72 bp | CAGTCTCTGCTGAGGATCCTGGTCCACCCTCCTCTCTaGGCTGGGTCAGCGTTGCCAAAGACGGCAACGTGC | + |
|
Preference number: 6 (lower is better) Translates to: QSLLRILVHPPL*AGSALPKTATC Trigger: GCACGTTGCCGTCTTTGGCAACGCTGACCCAGCCCAGAGAGGAGGGTGGACCAGGATCCTCAGCAGAGACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025981.15 ENSMUST00000135795.8 |
||
| CDS CAA 90 bp | CCCCAGCCCTATAGAATAGTACTGGCGGCTGGGTTTCTGGTGGCATaGAAGGGAAGGACTGGCCTCCGAACTCTGCAGCCAGGGCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PQPYRIVLAAGFLVA*KGRTGLRTLQPGPG Trigger: TCCAGGCCCTGGCTGCAGAGTTCGGAGGCCAGTCCTTCCCTTCAATGCCACCAGAAACCCAGCCGCCAGTACTATTCTATAGGGCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
||
| CDS CCA 72 bp | GGTCAGCGTTGCCAAAGACGGCAACGTGCTCCGGTCTaGGCCTTCCGTGCAGAGTCTGATAAACCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GQRCQRRQRAPV*AFRAESDKPPP Trigger: AGGAGGAGGTTTATCAGACTCTGCACGGAAGGCCCAGACCGGAGCACGTTGCCGTCTTTGGCAACGCTGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025981.15 ENSMUST00000135795.8 |
||
| CDS CCA 72 bp | GGGAAGGACTGGCCTCCGAACTCTGCAGCCAGGGCCTaGAAGTTGGTTGCATTGACTGTTTGGAGCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GKDWPPNSAARA*KLVALTVWSFW Trigger: CCAGAAGCTCCAAACAGTCAATGCAACCAACTTCCAGGCCCTGGCTGCAGAGTTCGGAGGCCAGTCCTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
||
| CDS CCA 72 bp | GACTCTGAAGTTATAGTAAGAGGCAGCATCCAGGGCTaGCTCCGAGGTGCAGCTACTGGCCAGGTCCCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: DSEVIVRGSIQG*LRGAATGQVPE Trigger: TTCAGGGACCTGGCCAGTAGCTGCACCTCGGAGCCAGCCCTGGATGCTGCCTCTTACTATAACTTCAGAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
||
| CDS GCA 72 bp | CGTGCAGAGTCTGATAAACCTCCTCCTGCAAGTGGCTaGAGTTCACCTCTCTGGGTCTTAACTGGCACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RAESDKPPPASG*SSPLWVLTGTQ Trigger: CTGGGTGCCAGTTAAGACCCAGAGAGGTGAACTGCAGCCACTTGCAGGAGGAGGTTTATCAGACTCTGCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025981.15 ENSMUST00000135795.8 |
||
| CDS TCA 72 bp | TTGTGTCACCAGTTAGCACTAAGAGTGGCTTCCCAGTaGGGTAGCCAGGATTCCCACTTCTCGGAGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LCHQLALRVASQ*GSQDSHFSEQQ Trigger: CTGCTGCTCCGAGAAGTGGGAATCCTGGCTACCTCACTGGGAAGCCACTCTTAGTGCTAACTGGTGACACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025981.15 ENSMUST00000135795.8 |
||
| CDS TCA 72 bp | TGGCTCTGCAAAGTGCTATTTCTGGGACTCAGCCTCTaGACTCTCTCAGAGGGAAGGCTGCTGACCCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: WLCKVLFLGLSL*TLSEGRLLTLK Trigger: CTTCAGGGTCAGCAGCCTTCCCTCTGAGAGAGTTCAGAGGCTGAGTCCCAGAAATAGCACTTTGCAGAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132452.2 |
||
| CDS CCA 72 bp | AAACCTCCTCCTGCAAGTGGCTGCAGTTCACCTCTCTaGGTCTTAACTGGCACCCAGATACTGCGTTCACTC | + |
|
Preference number: 6 (lower is better) Translates to: KPPPASGCSSPL*VLTGTQILRSL Trigger: GAGTGAACGCAGTATCTGGGTGCCAGTTAAGACCCAGAGAGGTGAACTGCAGCCACTTGCAGGAGGAGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025981.15 ENSMUST00000135795.8 |
||
| CDS CCA 72 bp | GGTGCTCCTGTACAGACTTGCATTGGTACAGGAATCTaGCTCCGGCCACATGAGCTTGTGGGTTGGACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: GAPVQTCIGTGI*LRPHELVGWTE Trigger: TTCAGTCCAACCCACAAGCTCATGTGGCCGGAGCCAGATTCCTGTACCAATGCAAGTCTGTACAGGAGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
||
| CDS CAA 72 bp | TATAGAATAGTACTGGCGGCTGGGTTTCTGGTGGCATaGAAGGGAAGGACTGGCCTCCGAACTCTGCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: YRIVLAAGFLVA*KGRTGLRTLQP Trigger: TGGCTGCAGAGTTCGGAGGCCAGTCCTTCCCTTCAATGCCACCAGAAACCCAGCCGCCAGTACTATTCTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
||
| CDS TCA 72 bp | AGCCCATTACCCTCGCTCTGCAACAGGGTCATCGAGTaGCTTGTGTCACCAGTTAGCACTAAGAGTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SPLPSLCNRVIE*LVSPVSTKSGF Trigger: GAAGCCACTCTTAGTGCTAACTGGTGACACAAGTCACTCGATGACCCTGTTGCAGAGCGAGGGTAATGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025981.15 ENSMUST00000135795.8 |
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| CDS TCA 72 bp | CTTTCTGCACACTGGCCCCTCTGCTCAACGCCGCTTTaGAGGGAAAGAAGAAATCGAATGGCAGCTTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: LSAHWPLCSTPL*RERRNRMAASS Trigger: ACTGGAAGCTGCCATTCGATTTCTTCTTTCCCTTCAAAGCGGCGTTGAGCAGAGGGGCCAGTGTGCAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS GCA 72 bp | GCCTCCGAACTCTGCAGCCAGGGCCTGGAAGTTGGTTaGATTGACTGTTTGGAGCTTCTGGAAATAGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: ASELCSQGLEVG*IDCLELLEIVC Trigger: GCAAACTATTTCCAGAAGCTCCAAACAGTCAATGCAACCAACTTCCAGGCCCTGGCTGCAGAGTTCGGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
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| CDS GCA 72 bp | CTGGCACCCAGATACTGCGTTCACTCCAAACTGTACTaGGTGTCTCTTAGCAGAGCAAAGCCCATTACCCTC | + |
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Preference number: 6 (lower is better) Translates to: LAPRYCVHSKLY*VSLSRAKPITL Trigger: GAGGGTAATGGGCTTTGCTCTGCTAAGAGACACGCAGTACAGTTTGGAGTGAACGCAGTATCTGGGTGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025981.15 ENSMUST00000135795.8 |
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| CDS CCA 72 bp | TATTCTGACATGTGTTTCCAGCCAACAGAGGAGGGCTaGCTTGTGAGGCAAGCGTCACAGGAACCTGGAACT | + |
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Preference number: 6 (lower is better) Translates to: YSDMCFQPTEEG*LVRQASQEPGT Trigger: AGTTCCAGGTTCCTGTGACGCTTGCCTCACAAGCCAGCCCTCCTCTGTTGGCTGGAAACACATGTCAGAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
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| CDS CAA 72 bp | TCTTGCTGTAAGGAGACCCCTGGCTTGACAGTCAGGTaGGTCTGTCGGAAGCTGACAGAGACTTTCTGGATC | + |
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Preference number: 6 (lower is better) Translates to: SCCKETPGLTVR*VCRKLTETFWI Trigger: GATCCAGAAAGTCTCTGTCAGCTTCCGACAGACCAACCTGACTGTCAAGCCAGGGGTCTCCTTACAGCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
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| CDS CAA 72 bp | ACTTCTCGGAGCAGCAGGAGCAGCGGCCTTTCTCTGTaGAAATGCCCTGAAGTGAACGATGAAGTCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: TSRSSRSSGLSL*KCPEVNDEVLL Trigger: CAGCAAGACTTCATCGTTCACTTCAGGGCATTTCAACAGAGAAAGGCCGCTGCTCCTGCTGCTCCGAGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025981.15 ENSMUST00000135795.8 |
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| CDS CAA 72 bp | TCTTTCTGCACACTGGCCCCTCTGCTCAACGCCGCTTaGAAGGGAAAGAAGAAATCGAATGGCAGCTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SFCTLAPLLNAA*KGKKKSNGSFQ Trigger: CTGGAAGCTGCCATTCGATTTCTTCTTTCCCTTCAAAGCGGCGTTGAGCAGAGGGGCCAGTGTGCAGAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS CAA 90 bp | ACGATGAAGTCTTGCTGTAAGGAGACCCCTGGCTTGACAGTCAGGTaGGTCTGTCGGAAGCTGACAGAGACTTTCTGGATCCCAAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: TMKSCCKETPGLTVR*VCRKLTETFWIPKV Trigger: GACCTTTGGGATCCAGAAAGTCTCTGTCAGCTTCCGACAGACCAACCTGACTGTCAAGCCAGGGGTCTCCTTACAGCAAGACTTCATCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
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| CDS CAA 90 bp | ACGAGAGAGTCTTTCTGCACACTGGCCCCTCTGCTCAACGCCGCTTaGAAGGGAAAGAAGAAATCGAATGGCAGCTTCCAGTCTATTCTG | + |
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Preference number: 6 (lower is better) Translates to: TRESFCTLAPLLNAA*KGKKKSNGSFQSIL Trigger: CAGAATAGACTGGAAGCTGCCATTCGATTTCTTCTTTCCCTTCAAAGCGGCGTTGAGCAGAGGGGCCAGTGTGCAGAAAGACTCTCTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS CCA 72 bp | TGCAAGTGGCTGCAGTTCACCTCTCTGGGTCTTAACTaGCACCCAGATACTGCGTTCACTCCAAACTGTACT | + |
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Preference number: 6 (lower is better) Translates to: CKWLQFTSLGLN*HPDTAFTPNCT Trigger: AGTACAGTTTGGAGTGAACGCAGTATCTGGGTGCCAGTTAAGACCCAGAGAGGTGAACTGCAGCCACTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025981.15 ENSMUST00000135795.8 |
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| CDS CCA 72 bp | AATTGCAAAGATGGAAAACGAGCCACCAGGCAGTGGTaGCTTCCTTCCTTACTGAAACGCTGCAGTCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: NCKDGKRATRQW*LPSLLKRCSLC Trigger: GCAGAGACTGCAGCGTTTCAGTAAGGAAGGAAGCCACCACTGCCTGGTGGCTCGTTTTCCATCTTTGCAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
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| CDS CAA 72 bp | TTCTATTCCTCTCTGGTGCTCCTGTACAGACTTGCATaGGTACAGGAATCTGGCTCCGGCCACATGAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: FYSSLVLLYRLA*VQESGSGHMSL Trigger: CAAGCTCATGTGGCCGGAGCCAGATTCCTGTACCAATGCAAGTCTGTACAGGAGCACCAGAGAGGAATAGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS CAA 90 bp | CAAAGATACTTCTATTCCTCTCTGGTGCTCCTGTACAGACTTGCATaGGTACAGGAATCTGGCTCCGGCCACATGAGCTTGTGGGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: QRYFYSSLVLLYRLA*VQESGSGHMSLWVG Trigger: TCCAACCCACAAGCTCATGTGGCCGGAGCCAGATTCCTGTACCAATGCAAGTCTGTACAGGAGCACCAGAGAGGAATAGAAGTATCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS TCA 72 bp | AAGAAATCGAATGGCAGCTTCCAGTCTATTCTGGGTTaGTCCCTAGGAGGCTCTGGCTTCTGGGTAATGTCC | + |
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Preference number: 6 (lower is better) Translates to: KKSNGSFQSILG*SLGGSGFWVMS Trigger: GGACATTACCCAGAAGCCAGAGCCTCCTAGGGATCAACCCAGAATAGACTGGAAGCTGCCATTCGATTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS CCA 72 bp | GCTCAACGCCGCTTTGAAGGGAAAGAAGAAATCGAATaGCAGCTTCCAGTCTATTCTGGGTTGATCCCTAGG | + |
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Preference number: 6 (lower is better) Translates to: AQRRFEGKEEIE*QLPVYSGLIPR Trigger: CCTAGGGATCAACCCAGAATAGACTGGAAGCTGCCATTCGATTTCTTCTTTCCCTTCAAAGCGGCGTTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS CCA 72 bp | CATAATTGCAAAGATGGAAAACGAGCCACCAGGCAGTaGTGGCTTCCTTCCTTACTGAAACGCTGCAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: HNCKDGKRATRQ*WLPSLLKRCSL Trigger: GAGACTGCAGCGTTTCAGTAAGGAAGGAAGCCACCACTGCCTGGTGGCTCGTTTTCCATCTTTGCAATTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135795.8 |
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| CDS CAA 72 bp | GAAGAAATCGAATGGCAGCTTCCAGTCTATTCTGGGTaGATCCCTAGGAGGCTCTGGCTTCTGGGTAATGTC | + |
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Preference number: 6 (lower is better) Translates to: EEIEWQLPVYSG*IPRRLWLLGNV Trigger: GACATTACCCAGAAGCCAGAGCCTCCTAGGGATCAACCCAGAATAGACTGGAAGCTGCCATTCGATTTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS TCA 72 bp | GAAGATCAGTCACACCTCTTGGAACCTTCAAGACTCTaGAGTTATAGTAAGAGGCAGCATCCAGGGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: EDQSHLLEPSRL*SYSKRQHPGLA Trigger: AGCCAGCCCTGGATGCTGCCTCTTACTATAACTTCAGAGTCTTGAAGGTTCCAAGAGGTGTGACTGATCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
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| CDS CCA 72 bp | CTACCAGGAAGACAGAAGGAAAAGACTGTTCTGGGATaGAGAAGATCGCAGTCCTTGTCACAGCAGCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: LPGRQKEKTVLG*RRSQSLSQQQF Trigger: AAACTGCTGCTGTGACAAGGACTGCGATCTTCTCCATCCCAGAACAGTCTTTTCCTTCTGTCTTCCTGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
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| CDS CCA 72 bp | TACTCAGAAAGACAGACAGACAGACAGTGTGGATACTaGCTCTGCAAAGTGCTATTTCTGGGACTCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: YSERQTDRQCGY*LCKVLFLGLSL Trigger: GAGGCTGAGTCCCAGAAATAGCACTTTGCAGAGCCAGTATCCACACTGTCTGTCTGTCTGTCTTTCTGAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132452.2 |
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| CDS CAA 90 bp | GAAGGGAAAGAAGAAATCGAATGGCAGCTTCCAGTCTATTCTGGGTaGATCCCTAGGAGGCTCTGGCTTCTGGGTAATGTCCACAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: EGKEEIEWQLPVYSG*IPRRLWLLGNVHKV Trigger: AACTTTGTGGACATTACCCAGAAGCCAGAGCCTCCTAGGGATCAACCCAGAATAGACTGGAAGCTGCCATTCGATTTCTTCTTTCCCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS TCA 72 bp | GAGGCAAGCGTCACAGGAACCTGGAACTTCATATTCTaGAGATCAGTCACACCTCTTGGAACCTTCAAGACT | + |
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Preference number: 6 (lower is better) Translates to: EASVTGTWNFIF*RSVTPLGTFKT Trigger: AGTCTTGAAGGTTCCAAGAGGTGTGACTGATCTTCAGAATATGAAGTTCCAGGTTCCTGTGACGCTTGCCTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
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| CDS GCA 72 bp | ACAAGAGTCGTCAAAGATACTTCTATTCCTCTCTGGTaGTCCTGTACAGACTTGCATTGGTACAGGAATCTG | + |
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Preference number: 6 (lower is better) Translates to: TRVVKDTSIPLW*SCTDLHWYRNL Trigger: CAGATTCCTGTACCAATGCAAGTCTGTACAGGAGCACCAGAGAGGAATAGAAGTATCTTTGACGACTCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025981.15 |
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| CDS CCA 72 bp | CTGGAACTTCATATTCTGAAGATCAGTCACACCTCTTaGAACCTTCAAGACTCTGAAGTTATAGTAAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: LELHILKISHTS*NLQDSEVIVRG Trigger: GCCTCTTACTATAACTTCAGAGTCTTGAAGGTTCCAAGAGGTGTGACTGATCTTCAGAATATGAAGTTCCAG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025981.15 ENSMUST00000132452.2 ENSMUST00000135795.8 |
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