Pregenerated sensors for TCTN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000118662Ensembl transcript IDs: ENSMUST00000239501.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATAGACATTCTGTTTATTAAAATGGTTCAGAGAGTCCAGGCATGGTaGAACATGCCTTTAATCCAGCACTCCAGAGGCAGAGACAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: IDILFIKMVQRVQAW*NMPLIQHSRGRDRQ Trigger: CTGCCTGTCTCTGCCTCTGGAGTGCTGGATTAAAGGCATGTTCCACCATGCCTGGACTCTCTGAACCATTTTAATAAACAGAATGTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| 3UTR TCA 90 bp | CTTACCTGCTTGCATCAATCAAGTCTGGTCAAACATAAAACCCCATaGTTAGAAATCCGTGCTGGGCTTAAGTCTCTGACACTTAGGACA | + |
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Preference number: 1 (lower is better) Translates to: LTCLHQSSLVKHKTP*LEIRAGLKSLTLRT Trigger: TGTCCTAAGTGTCAGAGACTTAAGCCCAGCACGGATTTCTAATCATGGGGTTTTATGTTTGACCAGACTTGATTGATGCAAGCAGGTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGATAGTAATCAGTCTTTTCTTTATGCTTACCTGCTTGCATCAATCAAGTCTCCGATGAGGAGCCGCTaGGTGGATGCCCTGAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: CDSNQSFLYAYLLASIKSPMRSR*VDALSL Trigger: AAGACTCAGGGCATCCACTCAGCGGCTCCTCATCGG...AGACTTGATTGATGCAAGCAGGTAAGCATAAAGAAAAGACTGATTACTATCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| 3UTR TCA 72 bp | TTGCATCAATCAAGTCTGGTCAAACATAAAACCCCATaGTTAGAAATCCGTGCTGGGCTTAAGTCTCTGACA | + |
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Preference number: 3 (lower is better) Translates to: LHQSSLVKHKTP*LEIRAGLKSLT Trigger: TGTCAGAGACTTAAGCCCAGCACGGATTTCTAATCATGGGGTTTTATGTTTGACCAGACTTGATTGATGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| 3UTR GCA 72 bp | TATGTGATAGTAATCAGTCTTTTCTTTATGCTTACCTaGTTGCATCAATCAAGTCTGGTCAAACATAAAACC | + |
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Preference number: 3 (lower is better) Translates to: YVIVISLFFMLT*LHQSSLVKHKT Trigger: GGTTTTATGTTTGACCAGACTTGATTGATGCAAGCAGGTAAGCATAAAGAAAAGACTGATTACTATCACATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR GCA 90 bp | GCCAGGGATATGTGGAGAGACCTGTCTCAAACTGACAGGTTTCAGAGAGGCGCAGGCCTCAGGACGCCCTaGAGCAGGAGGAGTCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: ARDMWRDLSQTDRFQRGAGLRTP*SRRSPH Trigger: GTGGGGACTCCTCCTGCTGCAGGGCGTCCTGAGGCC...TGCGCCTCTCTGAAACCTGTCAGTTTGAGACAGGTCTCTCCACATATCCCTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CCA 90 bp | CCAGCACTCCAGAGGCAGAGACAGGCAGATCTCTGTGAGCTTAGAAGCAAGCCAGATGGAGAGCCGGGCTaGAACTTCTGGGCACACGCC | + |
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Preference number: 4 (lower is better) Translates to: PALQRQRQADLCELRSKPDGEPG*NFWAHA Trigger: GGCGTGTGCCCAGAAGTTCCAGCCCGGCTCTCCATC...TGGCTTGCTTCTAAGCTCACAGAGATCTGCCTGTCTCTGCCTCTGGAGTGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR TCA 90 bp | AGGCAGAGACAGGCAGATCTCTGTGAGCTTAGAAGCAAGCCAGGGATATGTGGAGTCCCCACAGGAGGCTaGGCGGTGACAGAGAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: RQRQADLCELRSKPGICGVPTGG*AVTESP Trigger: TGGGCTCTCTGTCACCGCTCAGCCTCCTGTGGGGAC...TCCACATATCCCTGGCTTGCTTCTAAGCTCACAGAGATCTGCCTGTCTCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR TCA 90 bp | AGGCAGAGACAGGCAGATCTCTGTGAGCTTAGAAGCAAGCCAGGGATATGTGGAGCCAGGATCTCCCGCTaGGCCACCCCTTCCACAGAG | + |
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Preference number: 4 (lower is better) Translates to: RQRQADLCELRSKPGICGARISR*ATPSTE Trigger: CTCTGTGGAAGGGGTGGCTCAGCGGGAGATCCTGGC...TCCACATATCCCTGGCTTGCTTCTAAGCTCACAGAGATCTGCCTGTCTCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR GCA 90 bp | CAAGCCAGGGATATGTGGAGAGACCTGTCTCAAACTGACAGGTTTCAGAGAGGCGACGGAGGGCTGACGTaGCCTCCAAACACGCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: QARDMWRDLSQTDRFQRGDGGLT*PPNTPE Trigger: CTCCGGCGTGTTTGGAGGGCACGTCAGCCCTCCGTC...GCCTCTCTGAAACCTGTCAGTTTGAGACAGGTCTCTCCACATATCCCTGGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR GCA 90 bp | AGGCAGAGACAGGCAGATCTCTGTGAGCTTAGAAGCAAGCCAGGGATATGTGGACCCCTTCCAGCTGGCTaGCAGAGGTGCAGTGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: RQRQADLCELRSKPGICGPLPAG*QRCSVL Trigger: CAGCACACTGCACCTCTGGCAGCCAGCTGGAAGGGG...TCCACATATCCCTGGCTTGCTTCTAAGCTCACAGAGATCTGCCTGTCTCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR GCA 90 bp | CTTAAGTCTCTGACACTTAGGACACCCTCGATTCCCCTGCAACCAGCTAGAATCGGGTCTGAGAGCGGCTaGTGTGCACAGGCCCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LKSLTLRTPSIPLQPARIGSESG*CAQAPS Trigger: GGAAGGGGCCTGTGCACAGCAGCCGCTCTCAGACCC...GATTCTAGCTGGTTGCAGGGGAATCGAGGGTGTCCTAAGTGTCAGAGACTTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CCA 90 bp | CCAGGGATATGTGGAGAGACCTGTCTCAAACTGACAGGTTTCAGAGAGGCGCAAAGCCGGGGGAATGTCTaGGGGAAGTGGCACCGTGGT | + |
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Preference number: 4 (lower is better) Translates to: PGICGETCLKLTGFREAQSRGNV*GKWHRG Trigger: ACCACGGTGCCACTTCCCCCAGACATTCCCCCGGCT...TTGCGCCTCTCTGAAACCTGTCAGTTTGAGACAGGTCTCTCCACATATCCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CCA 90 bp | CAAGCCAGGGATATGTGGAGAGACCTGTCTCAAACTGACAGGTTTCAGAGAGGCCAGGCCCCTTCCAGCTaGCTGCCAGAGGTGCAGTGT | + |
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Preference number: 4 (lower is better) Translates to: QARDMWRDLSQTDRFQRGQAPSS*LPEVQC Trigger: ACACTGCACCTCTGGCAGCCAGCTGGAAGGGGCCTG...GCCTCTCTGAAACCTGTCAGTTTGAGACAGGTCTCTCCACATATCCCTGGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR GCA 90 bp | TTTAATCCAGCACTCCAGAGGCAGAGACAGGCAGATCTCTGTGAGCTTAGAAGCATCCTGACCCAGGGGTaGCTGAGGAGGATGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: FNPALQRQRQADLCELRSILTQG*LRRMAS Trigger: GCTGGCCATCCTCCTCAGGCACCCCTGGGTCAGGAT...GCTTCTAAGCTCACAGAGATCTGCCTGTCTCTGCCTCTGGAGTGCTGGATTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CCA 90 bp | CCAGCACTCCAGAGGCAGAGACAGGCAGATCTCTGTGAGCTTAGAAGCAAGCCACATCCGGATGAAAGGTaGGATGAAAACCGGGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: PALQRQRQADLCELRSKPHPDER*DENRVP Trigger: GGGGACCCGGTTTTCATCCCACCTTTCATCCGGATG...TGGCTTGCTTCTAAGCTCACAGAGATCTGCCTGTCTCTGCCTCTGGAGTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CCA 90 bp | GATATGTGGAGAGACCTGTCTCAAACTGACAGGTTTCAGAGAGGCGCAAGGGCCGCAGCATCAGGCCTTTaGCCACACACTGAGACTGGG | + |
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Preference number: 4 (lower is better) Translates to: DMWRDLSQTDRFQRGARAAASGL*PHTETG Trigger: CCCAGTCTCAGTGTGTGGCCAAAGGCCTGATGCTGC...GGCCCTTGCGCCTCTCTGAAACCTGTCAGTTTGAGACAGGTCTCTCCACATATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR TCA 90 bp | AGAGACCTGTCTCAAACTGACAGGTTTCAGAGAGGCGCAAGGGCCGATGAGGAGTGGTCACAGCAGCATTaGATGTCACAGGCCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: RDLSQTDRFQRGARADEEWSQQH*MSQALA Trigger: AGCCAAGGCCTGTGACATTCAATGCTGCTGTGACCA...CTCCTCATCGGCCCTTGCGCCTCTCTGAAACCTGTCAGTTTGAGACAGGTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR TCA 90 bp | AGGCAGAGACAGGCAGATCTCTGTGAGCTTAGAAGCAAGCCAGGGATATGTGGAGGAGGATGGCCAGCATaGGGAGTGACAGCAGCATCA | + |
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Preference number: 4 (lower is better) Translates to: RQRQADLCELRSKPGICGGGWPA*GVTAAS Trigger: TGATGCTGCTGTCACTCCTCATGCTGGCCATCCTCC...TCCACATATCCCTGGCTTGCTTCTAAGCTCACAGAGATCTGCCTGTCTCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR GCA 90 bp | GAAATCCGTGCTGGGCTTAAGTCTCTGACACTTAGGACACCCTCGATTCCCCTGCCTCGCCACGTGCGTTaGTTGTGTCAGCAAATCCAG | + |
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Preference number: 4 (lower is better) Translates to: EIRAGLKSLTLRTPSIPLPRHVR*LCQQIQ Trigger: CTGGATTTGCTGACACAAGCAACGCACGTGGCGAGG...CAGGGGAATCGAGGGTGTCCTAAGTGTCAGAGACTTAAGCCCAGCACGGATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR TCA 90 bp | GCCAGGGATATGTGGAGAGACCTGTCTCAAACTGACAGGTTTCAGAGAGGCGCATCTCTTACTTCTGGCTaGCAGTCCTGGTCACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: ARDMWRDLSQTDRFQRGASLTSG*QSWSQQ Trigger: CTGCTGTGACCAGGACTGTCAGCCAGAAGTAAGAGA...TGCGCCTCTCTGAAACCTGTCAGTTTGAGACAGGTCTCTCCACATATCCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR TCA 90 bp | GATATGTGGAGAGACCTGTCTCAAACTGACAGGTTTCAGAGAGGCGCAAGGGCCCAAACAAAATGGGTCTaGGAGCGGCTGCTGTGCACA | + |
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Preference number: 4 (lower is better) Translates to: DMWRDLSQTDRFQRGARAQTKWV*ERLLCT Trigger: TGTGCACAGCAGCCGCTCTCAGACCCATTTTGTTTG...GGCCCTTGCGCCTCTCTGAAACCTGTCAGTTTGAGACAGGTCTCTCCACATATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR TCA 90 bp | TTTAATCCAGCACTCCAGAGGCAGAGACAGGCAGATCTCTGTGAGCTTAGAAGCACTCAACAGAGGCACTaGGAGGGAGAAGGTCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: FNPALQRQRQADLCELRSTQQRH*EGEGRP Trigger: AGGCCGACCTTCTCCCTCTCAGTGCCTCTGTTGAGT...GCTTCTAAGCTCACAGAGATCTGCCTGTCTCTGCCTCTGGAGTGCTGGATTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR GCA 90 bp | GCCAGGGATATGTGGAGAGACCTGTCTCAAACTGACAGGTTTCAGAGAGGCGCAACTCCTTCCTCGACCTaGAGCAGACTCAGAGACACA | + |
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Preference number: 4 (lower is better) Translates to: ARDMWRDLSQTDRFQRGATPSST*SRLRDT Trigger: TGTGTCTCTGAGTCTGCTGCAGGTCGAGGAAGGAGT...TGCGCCTCTCTGAAACCTGTCAGTTTGAGACAGGTCTCTCCACATATCCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR GCA 90 bp | CCAGCACTCCAGAGGCAGAGACAGGCAGATCTCTGTGAGCTTAGAAGCAAGCCATCATCTCGTCCTTGGTaGACTTCCAGGTCCATGGTA | + |
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Preference number: 4 (lower is better) Translates to: PALQRQRQADLCELRSKPSSRPW*TSRSMV Trigger: TACCATGGACCTGGAAGTGCACCAAGGACGAGATGA...TGGCTTGCTTCTAAGCTCACAGAGATCTGCCTGTCTCTGCCTCTGGAGTGCTGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR GCA 90 bp | GCCAGGGATATGTGGAGAGACCTGTCTCAAACTGACAGGTTTCAGAGAGGCGCAAGCCCACACTGGTACTaGCAGGTCACTGTGGAAAAC | + |
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Preference number: 4 (lower is better) Translates to: ARDMWRDLSQTDRFQRGASPHWY*QVTVEN Trigger: GTTTTCCACAGTGACCTGGCAGTACCAGTGTGGGCT...TGCGCCTCTCTGAAACCTGTCAGTTTGAGACAGGTCTCTCCACATATCCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CCA 90 bp | AGAGACCTGTCTCAAACTGACAGGTTTCAGAGAGGCGCAAGGGCCGATGAGGAGCAGCTCTCTTACTTCTaGCTGACAGTCCTGGTCACA | + |
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Preference number: 4 (lower is better) Translates to: RDLSQTDRFQRGARADEEQLSYF*LTVLVT Trigger: TGTGACCAGGACTGTCAGCCAGAAGTAAGAGAGCTG...CTCCTCATCGGCCCTTGCGCCTCTCTGAAACCTGTCAGTTTGAGACAGGTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CCA 90 bp | AGAGACCTGTCTCAAACTGACAGGTTTCAGAGAGGCGCAAGGGCCGATGAGGAGATCATTCCTCTCTGCTaGGCACTGATTTCTGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: RDLSQTDRFQRGARADEEIIPLC*ALISAL Trigger: CAGGGCAGAAATCAGTGCCCAGCAGAGAGGAATGAT...CTCCTCATCGGCCCTTGCGCCTCTCTGAAACCTGTCAGTTTGAGACAGGTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CCA 90 bp | AGAGACCTGTCTCAAACTGACAGGTTTCAGAGAGGCGCAAGGGCCGATGAGGAGACTGCCAGGTCACTGTaGAAAACCTTGTCTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: RDLSQTDRFQRGARADEETARSL*KTLSPQ Trigger: CTGTGGAGACAAGGTTTTCCACAGTGACCTGGCAGT...CTCCTCATCGGCCCTTGCGCCTCTCTGAAACCTGTCAGTTTGAGACAGGTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR TCA 90 bp | GCCAGGGATATGTGGAGAGACCTGTCTCAAACTGACAGGTTTCAGAGAGGCGCAGAAGGACATTCTCTCTaGGCTGGGTACAGTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: ARDMWRDLSQTDRFQRGAEGHSL*AGYSSP Trigger: AGGAGAACTGTACCCAGCTCAGAGAGAATGTCCTTC...TGCGCCTCTCTGAAACCTGTCAGTTTGAGACAGGTCTCTCCACATATCCCTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR GCA 90 bp | GAAATCCGTGCTGGGCTTAAGTCTCTGACACTTAGGACACCCTCGATTCCCCTGCCGGACCTCCTGTTGTaGGGATTTTCATGTTCTCGA | + |
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Preference number: 4 (lower is better) Translates to: EIRAGLKSLTLRTPSIPLPDLLL*GFSCSR Trigger: TCGAGAACATGAAAATCCGCACAACAGGAGGTCCGG...CAGGGGAATCGAGGGTGTCCTAAGTGTCAGAGACTTAAGCCCAGCACGGATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CCA 90 bp | AATCCAGCACTCCAGAGGCAGAGACAGGCAGATCTCTGTGAGCTTAGAAGCAAGGCCACAAGTAGGAACTaGCAACACTCCTTCCTCGAC | + |
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Preference number: 4 (lower is better) Translates to: NPALQRQRQADLCELRSKATSRN*QHSFLD Trigger: GTCGAGGAAGGAGTGTTGCCAGTTCCTACTTGTGGC...CTTGCTTCTAAGCTCACAGAGATCTGCCTGTCTCTGCCTCTGGAGTGCTGGATT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CCA 90 bp | AATCCAGCACTCCAGAGGCAGAGACAGGCAGATCTCTGTGAGCTTAGAAGCAAGCCCTCTTCCACCTTATaGTCACTTCCAGCGTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: NPALQRQRQADLCELRSKPSSTL*SLPACS Trigger: AGAGCACGCTGGAAGTGACCATAAGGTGGAAGAGGG...CTTGCTTCTAAGCTCACAGAGATCTGCCTGTCTCTGCCTCTGGAGTGCTGGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR TCA 90 bp | AGCAAGCCAGGGATATGTGGAGAGACCTGTCTCAAACTGACAGGTTTCAGAGAGAAATCTCCACCTGGATaGGCAGATGTGCTAAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SKPGICGETCLKLTGFREKSPPG*ADVLSR Trigger: CCTGCTTAGCACATCTGCTCATCCAGGTGGAGATTT...CTCTCTGAAACCTGTCAGTTTGAGACAGGTCTCTCCACATATCCCTGGCTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR TCA 90 bp | GAAATCCGTGCTGGGCTTAAGTCTCTGACACTTAGGACACCCTCGATTCCCCTGTTCTCACCACCACTGTaGTGGCTTAAAAACTTCACT | + |
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Preference number: 4 (lower is better) Translates to: EIRAGLKSLTLRTPSIPLFSPPL*WLKNFT Trigger: AGTGAAGTTTTTAAGCCATCACAGTGGTGGTGAGAA...CAGGGGAATCGAGGGTGTCCTAAGTGTCAGAGACTTAAGCCCAGCACGGATTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CCA 90 bp | GCCAGGGATATGTGGAGAGACCTGTCTCAAACTGACAGGTTTCAGAGAGGCGCAACATTCTCTCTGAGCTaGGTACAGTTCTCCTTAATC | + |
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Preference number: 4 (lower is better) Translates to: ARDMWRDLSQTDRFQRGATFSLS*VQFSLI Trigger: GATTAAGGAGAACTGTACCCAGCTCAGAGAGAATGT...TGCGCCTCTCTGAAACCTGTCAGTTTGAGACAGGTCTCTCCACATATCCCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CCA 90 bp | AATCCAGCACTCCAGAGGCAGAGACAGGCAGATCTCTGTGAGCTTAGAAGCAAGGCACTTCCAGGTCCATaGTACATACACTGTCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: NPALQRQRQADLCELRSKALPGP*YIHCQN Trigger: ATTTTGACAGTGTATGTACCATGGACCTGGAAGTGC...CTTGCTTCTAAGCTCACAGAGATCTGCCTGTCTCTGCCTCTGGAGTGCTGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR TCA 90 bp | AGGCAGAGACAGGCAGATCTCTGTGAGCTTAGAAGCAAGCCAGGGATATGTGGATTAAAAACTTCACTGTaGATCTCTGGGTCATCATTC | + |
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Preference number: 4 (lower is better) Translates to: RQRQADLCELRSKPGICGLKTSL*ISGSSF Trigger: GAATGATGACCCAGAGATTCACAGTGAAGTTTTTAA...TCCACATATCCCTGGCTTGCTTCTAAGCTCACAGAGATCTGCCTGTCTCTGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CCA 90 bp | TGTGATAGTAATCAGTCTTTTCTTTATGCTTACCTGCTTGCATCAATCAAGTCTCTCCTTGCTTGTAACTaGCATCCGCGAAGTCTCTTA | + |
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Preference number: 4 (lower is better) Translates to: CDSNQSFLYAYLLASIKSLLACN*HPRSLL Trigger: TAAGAGACTTCGCGGATGCCAGTTACAAGCAAGGAG...AGACTTGATTGATGCAAGCAGGTAAGCATAAAGAAAAGACTGATTACTATCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CCA 90 bp | TGTGATAGTAATCAGTCTTTTCTTTATGCTTACCTGCTTGCATCAATCAAGTCTGGGTTACAGATGTGTTaGGATAAATCTCCACCTGGA | + |
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Preference number: 4 (lower is better) Translates to: CDSNQSFLYAYLLASIKSGLQMC*DKSPPG Trigger: TCCAGGTGGAGATTTATCCCAACACATCTGTAACCC...AGACTTGATTGATGCAAGCAGGTAAGCATAAAGAAAAGACTGATTACTATCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CCA 90 bp | TGTGATAGTAATCAGTCTTTTCTTTATGCTTACCTGCTTGCATCAATCAAGTCTACTTGTCCAGGTCAATaGCTTCCTCATAGGTTACTG | + |
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Preference number: 4 (lower is better) Translates to: CDSNQSFLYAYLLASIKSTCPGQ*LPHRLL Trigger: CAGTAACCTATGAGGAAGCCATTGACCTGGACAAGT...AGACTTGATTGATGCAAGCAGGTAAGCATAAAGAAAAGACTGATTACTATCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CCA 90 bp | TGTGATAGTAATCAGTCTTTTCTTTATGCTTACCTGCTTGCATCAATCAAGTCTGCCAAGCTGGTAACCTaGATTTCCAGAAAATTCCTT | + |
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Preference number: 4 (lower is better) Translates to: CDSNQSFLYAYLLASIKSAKLVT*ISRKFL Trigger: AAGGAATTTTCTGGAAATCCAGGTTACCAGCTTGGC...AGACTTGATTGATGCAAGCAGGTAAGCATAAAGAAAAGACTGATTACTATCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS GCA 90 bp | CTTCCTCGACCTGCAGCAGACTCAGAGACACAGCGACATCCTCGCTaGCTCCGACCAGGGTCGCTCGGACCTCAGGGCTGGACATCCGGA | + |
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Preference number: 5 (lower is better) Translates to: LPRPAADSETQRHPR*LRPGSLGPQGWTSG Trigger: TCCGGATGTCCAGCCCTGAGGTCCGAGCGACCCTGGTCGGAGGCAGCGAGGATGTCGCTGTGTCTCTGAGTCTGCTGCAGGTCGAGGAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS GCA 90 bp | ATGGGTCTGAGAGCGGCTGCTGTGCACAGGCCCCTTCCAGCTGGCTaGCAGAGGTGCAGTGTGCTGACGTTCATCCCAGCGGTATGCAGG | + |
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Preference number: 5 (lower is better) Translates to: MGLRAAAVHRPLPAG*QRCSVLTFIPAVCR Trigger: CCTGCATACCGCTGGGATGAACGTCAGCACACTGCACCTCTGGCAGCCAGCTGGAAGGGGCCTGTGCACAGCAGCCGCTCTCAGACCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CCA 90 bp | CAAAATGGGTCTGAGAGCGGCTGCTGTGCACAGGCCCCTTCCAGCTaGCTGCCAGAGGTGCAGTGTGCTGACGTTCATCCCAGCGGTATG | + |
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Preference number: 5 (lower is better) Translates to: QNGSESGCCAQAPSS*LPEVQCADVHPSGM Trigger: CATACCGCTGGGATGAACGTCAGCACACTGCACCTCTGGCAGCCAGCTGGAAGGGGCCTGTGCACAGCAGCCGCTCTCAGACCCATTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CCA 90 bp | AGTGGCACCGTGGTAGAAGTGACCAAGGAACGGCGAGGTAGAGGGTaGCGACTGCACACACAGGAGGGGAAACCAGTCAGGAGTCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: SGTVVEVTKERRGRG*RLHTQEGKPVRSLV Trigger: CACCAGACTCCTGACTGGTTTCCCCTCCTGTGTGTGCAGTCGCCACCCTCTACCTCGCCGTTCCTTGGTCACTTCTACCACGGTGCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CCA 90 bp | CTGAGAGGGAGAAGGTCGGCCTTGTCCTCACAAGTGAGCCCACACTaGTACTGCCAGGTCACTGTGGAAAACCTTGTCTCCACAGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: LRGRRSALSSQVSPH*YCQVTVENLVSTAR Trigger: CCTGGCTGTGGAGACAAGGTTTTCCACAGTGACCTGGCAGTACCAGTGTGGGCTCACTTGTGAGGACAAGGCCGACCTTCTCCCTCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CAA 90 bp | AATCCAGCACTCCAGAGGCAGAGACAGGCAGATCTCTGTGAGCTTAGAAGCAAGGCTGAGTCCCGGGCTTaGCACATCCTGACCCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: NPALQRQRQADLCELRSKAESRA*HILTQG Trigger: CCCCTGGGTCAGGATGTGCAAAGCCCGGGACTCAGC...CTTGCTTCTAAGCTCACAGAGATCTGCCTGTCTCTGCCTCTGGAGTGCTGGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CCA 90 bp | ATTCCAATCCACTGTCTCATTGCGGCGGCCGCCACAAGTAGGAACTaGCAACACTCCTTCCTCGACCTGCAGCAGACTCAGAGACACAGC | + |
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Preference number: 5 (lower is better) Translates to: IPIHCLIAAAATSRN*QHSFLDLQQTQRHS Trigger: GCTGTGTCTCTGAGTCTGCTGCAGGTCGAGGAAGGAGTGTTGCCAGTTCCTACTTGTGGCGGCCGCCGCAATGAGACAGTGGATTGGAAT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CCA 90 bp | CTGGCTGACAGTCCTGGTCACAGCAGCATTGAATGTCACAGGCCTTaGCTGTTAAGTCACACGGGCAGGGACCCAGGGGCTGATAGACTT | + |
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Preference number: 5 (lower is better) Translates to: LADSPGHSSIECHRP*LLSHTGRDPGADRL Trigger: AAGTCTATCAGCCCCTGGGTCCCTGCCCGTGTGACTTAACAGCCAAGGCCTGTGACATTCAATGCTGCTGTGACCAGGACTGTCAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CAA 90 bp | GAAATCCGTGCTGGGCTTAAGTCTCTGACACTTAGGACACCCTCGATTCCCCTGGGGAGAAGGTCGGCCTaGTCCTCACAAGTGAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: EIRAGLKSLTLRTPSIPLGRRSA*SSQVSP Trigger: TGGGCTCACTTGTGAGGACAAGGCCGACCTTCTCCC...CAGGGGAATCGAGGGTGTCCTAAGTGTCAGAGACTTAAGCCCAGCACGGATTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS GCA 90 bp | AGCACCAGTCTAGACCCCTCTTCCACCTTATGGTCACTTCCAGCGTaGTCTCTCGGGGGCTCACAGTCACATTCCAATCCACTGTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: STSLDPSSTLWSLPA*SLGGSQSHSNPLSH Trigger: ATGAGACAGTGGATTGGAATGTGACTGTGAGCCCCCGAGAGAGCACGCTGGAAGTGACCATAAGGTGGAAGAGGGGTCTAGACTGGTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CAA 90 bp | AGAGACCTGTCTCAAACTGACAGGTTTCAGAGAGGCGCAAGGGCCGATGAGGAGCATAATGGGATCTCCTaGCTTGTAACTGGCATCCGC | + |
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Preference number: 5 (lower is better) Translates to: RDLSQTDRFQRGARADEEHNGIS*LVTGIR Trigger: GCGGATGCCAGTTACAAGCAAGGAGATCCCATTATG...CTCCTCATCGGCCCTTGCGCCTCTCTGAAACCTGTCAGTTTGAGACAGGTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CAA 90 bp | GATATGTGGAGAGACCTGTCTCAAACTGACAGGTTTCAGAGAGGCGCAAGGGCCCAGAGGGTACAGAAGTaGGGGCCAACACAGCTCATT | + |
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Preference number: 5 (lower is better) Translates to: DMWRDLSQTDRFQRGARAQRVQK*GPTQLI Trigger: AATGAGCTGTGTTGGCCCCAACTTCTGTACCCTCTG...GGCCCTTGCGCCTCTCTGAAACCTGTCAGTTTGAGACAGGTCTCTCCACATATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CAA 90 bp | CCAGGGATATGTGGAGAGACCTGTCTCAAACTGACAGGTTTCAGAGAGGCGCAAAGACTGGGGCTCCCCTaGATAATACTGGGTCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: PGICGETCLKLTGFREAQRLGLP*IILGQR Trigger: CCTCTGACCCAGTATTATCAAGGGGAGCCCCAGTCT...TTGCGCCTCTCTGAAACCTGTCAGTTTGAGACAGGTCTCTCCACATATCCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS GCA 90 bp | ACTCAGATCACTGTAGTCCGAGTTGCCTCTCCTCGCCACGTGCGTTaGTTGTGTCAGCAAATCCAGTCTCTGAAGGACATTCTCTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: TQITVVRVASPRHVR*LCQQIQSLKDILSE Trigger: CTCAGAGAGAATGTCCTTCAGAGACTGGATTTGCTGACACAAGCAACGCACGTGGCGAGGAGAGGCAACTCGGACTACAGTGATCTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CAA 90 bp | AGAGACCTGTCTCAAACTGACAGGTTTCAGAGAGGCGCAAGGGCCGATGAGGAGAATTTCATCTCGTCCTaGGTGCACTTCCAGGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: RDLSQTDRFQRGARADEENFISS*VHFQVH Trigger: ATGGACCTGGAAGTGCACCAAGGACGAGATGAAATT...CTCCTCATCGGCCCTTGCGCCTCTCTGAAACCTGTCAGTTTGAGACAGGTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CAA 90 bp | TTTAATCCAGCACTCCAGAGGCAGAGACAGGCAGATCTCTGTGAGCTTAGAAGCGGGCTGGTGATGAACTaGTCCAGGTCAATGGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: FNPALQRQRQADLCELRSGLVMN*SRSMAS Trigger: GGAAGCCATTGACCTGGACAAGTTCATCACCAGCCC...GCTTCTAAGCTCACAGAGATCTGCCTGTCTCTGCCTCTGGAGTGCTGGATTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CAA 90 bp | TTTAATCCAGCACTCCAGAGGCAGAGACAGGCAGATCTCTGTGAGCTTAGAAGCCGCCACGTGCGTTGCTaGTGTCAGCAAATCCAGTCT | + |
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Preference number: 5 (lower is better) Translates to: FNPALQRQRQADLCELRSRHVRC*CQQIQS Trigger: AGACTGGATTTGCTGACACAAGCAACGCACGTGGCG...GCTTCTAAGCTCACAGAGATCTGCCTGTCTCTGCCTCTGGAGTGCTGGATTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CAA 90 bp | CAAGCCAGGGATATGTGGAGAGACCTGTCTCAAACTGACAGGTTTCAGAGAGGCTCACTGTGGAAAACCTaGTCTCCACAGCCAGGATCT | + |
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Preference number: 5 (lower is better) Translates to: QARDMWRDLSQTDRFQRGSLWKT*SPQPGS Trigger: AGATCCTGGCTGTGGAGACAAGGTTTTCCACAGTGA...GCCTCTCTGAAACCTGTCAGTTTGAGACAGGTCTCTCCACATATCCCTGGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CCA 90 bp | GGTGATGAACTTGTCCAGGTCAATGGCTTCCTCATAGGTTACTGTTaGTGTGACCGGACCTCCTGTTGTGCGGATTTTCATGTTCTCGAG | + |
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Preference number: 5 (lower is better) Translates to: GDELVQVNGFLIGYC*CDRTSCCADFHVLE Trigger: CTCGAGAACATGAAAATCCGCACAACAGGAGGTCCGGTCACACCAACAGTAACCTATGAGGAAGCCATTGACCTGGACAAGTTCATCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS-3UTR CAA 90 bp | CTTAAGTCTCTGACACTTAGGACACCCTCGATTCCCCTGCAACCAGCTAGAATCCAGGGGCTGATAGACTaGGTTAGGAATGACAGTCAT | + |
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Preference number: 5 (lower is better) Translates to: LKSLTLRTPSIPLQPARIQGLID*VRNDSH Trigger: ATGACTGTCATTCCTAACCAAGTCTATCAGCCCCTG...GATTCTAGCTGGTTGCAGGGGAATCGAGGGTGTCCTAAGTGTCAGAGACTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS TCA 90 bp | ATGCGTTGTGGGTTACAGATGTGTTGGGATAAATCTCCACCTGGATaGGCAGATGTGCTAAGCAGGATGCATTGTGGGAGGCTGAAACTA | + |
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Preference number: 5 (lower is better) Translates to: MRCGLQMCWDKSPPG*ADVLSRMHCGRLKL Trigger: TAGTTTCAGCCTCCCACAATGCATCCTGCTTAGCACATCTGCTCATCCAGGTGGAGATTTATCCCAACACATCTGTAACCCACAACGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS TCA 90 bp | ACCCAGGGGCTGATAGACTTGGTTAGGAATGACAGTCATGTTCTCTaGTGCGTTGTGGGTTACAGATGTGTTGGGATAAATCTCCACCTG | + |
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Preference number: 5 (lower is better) Translates to: TQGLIDLVRNDSHVL*CVVGYRCVGINLHL Trigger: CAGGTGGAGATTTATCCCAACACATCTGTAACCCACAACGCATCAGAGAACATGACTGTCATTCCTAACCAAGTCTATCAGCCCCTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CCA 72 bp | CGCTCGGACCTCAGGGCTGGACATCCGGATGAAAGGTaGGATGAAAACCGGGTCCCCGCGCAGCGGCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: RSDLRAGHPDER*DENRVPAQRPQ Trigger: CTGAGGCCGCTGCGCGGGGACCCGGTTTTCATCCCACCTTTCATCCGGATGTCCAGCCCTGAGGTCCGAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS GCA 72 bp | AGAGCGGCTGCTGTGCACAGGCCCCTTCCAGCTGGCTaGCAGAGGTGCAGTGTGCTGACGTTCATCCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: RAAAVHRPLPAG*QRCSVLTFIPA Trigger: CGCTGGGATGAACGTCAGCACACTGCACCTCTGGCAGCCAGCTGGAAGGGGCCTGTGCACAGCAGCCGCTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS GCA 72 bp | GCTGTGCACAGGCCCCTTCCAGCTGGCTGCCAGAGGTaGAGTGTGCTGACGTTCATCCCAGCGGTATGCAGG | + |
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Preference number: 6 (lower is better) Translates to: AVHRPLPAGCQR*SVLTFIPAVCR Trigger: CCTGCATACCGCTGGGATGAACGTCAGCACACTGCACCTCTGGCAGCCAGCTGGAAGGGGCCTGTGCACAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS GCA 72 bp | GCTGAGTCCCGGGCTTTGCACATCCTGACCCAGGGGTaGCTGAGGAGGATGGCCAGCATGAGGAGTGACAGC | + |
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Preference number: 6 (lower is better) Translates to: AESRALHILTQG*LRRMASMRSDS Trigger: GCTGTCACTCCTCATGCTGGCCATCCTCCTCAGGCACCCCTGGGTCAGGATGTGCAAAGCCCGGGACTCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CCA 72 bp | AGTGAGAATGCGGATGGAGAGCCGGGCTGGAACTTCTaGGCACACGCCATTCACGCTGCTCAAGGGCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: SENADGEPGWNF*AHAIHAAQGQV Trigger: GACCTGCCCTTGAGCAGCGTGAATGGCGTGTGCCCAGAAGTTCCAGCCCGGCTCTCCATCCGCATTCTCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CCA 72 bp | GTGGTAGAAGTGACCAAGGAACGGCGAGGTAGAGGGTaGCGACTGCACACACAGGAGGGGAAACCAGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: VVEVTKERRGRG*RLHTQEGKPVR Trigger: CCTGACTGGTTTCCCCTCCTGTGTGTGCAGTCGCCACCCTCTACCTCGCCGTTCCTTGGTCACTTCTACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CAA 90 bp | GTGCTCTCTCGGGGGCTCACAGTCACATTCCAATCCACTGTCTCATaGCGGCGGCCGCCACAAGTAGGAACTGGCAACACTCCTTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: VLSRGLTVTFQSTVS*RRPPQVGTGNTPSS Trigger: CGAGGAAGGAGTGTTGCCAGTTCCTACTTGTGGCGGCCGCCGCAATGAGACAGTGGATTGGAATGTGACTGTGAGCCCCCGAGAGAGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CCA 72 bp | CGAAGTGCAAATGGGCTTCAAAGCCGGGGGAATGTCTaGGGGAAGTGGCACCGTGGTAGAAGTGACCAAGGA | + |
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Preference number: 6 (lower is better) Translates to: RSANGLQSRGNV*GKWHRGRSDQG Trigger: TCCTTGGTCACTTCTACCACGGTGCCACTTCCCCCAGACATTCCCCCGGCTTTGAAGCCCATTTGCACTTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CCA 72 bp | CTGGCATCCGCGAAGTCTCTTAGGTCGAAGTGCAAATaGGCTTCAAAGCCGGGGGAATGTCTGGGGGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: LASAKSLRSKCK*ASKPGECLGEV Trigger: CACTTCCCCCAGACATTCCCCCGGCTTTGAAGCCCATTTGCACTTCGACCTAAGAGACTTCGCGGATGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CAA 72 bp | CAGGCCTTTGGCCACACACTGAGACTGGGGCTCCCCTaGATAATACTGGGTCAGAGGGTACAGAAGTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: QAFGHTLRLGLP*IILGQRVQKLG Trigger: CCCCAACTTCTGTACCCTCTGACCCAGTATTATCAAGGGGAGCCCCAGTCTCAGTGTGTGGCCAAAGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS GCA 72 bp | CTAGACCCCTCTTCCACCTTATGGTCACTTCCAGCGTaGTCTCTCGGGGGCTCACAGTCACATTCCAATCCA | + |
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Preference number: 6 (lower is better) Translates to: LDPSSTLWSLPA*SLGGSQSHSNP Trigger: TGGATTGGAATGTGACTGTGAGCCCCCGAGAGAGCACGCTGGAAGTGACCATAAGGTGGAAGAGGGGTCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CCA 72 bp | AGAAGGTCGGCCTTGTCCTCACAAGTGAGCCCACACTaGTACTGCCAGGTCACTGTGGAAAACCTTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: RRSALSSQVSPH*YCQVTVENLVS Trigger: GGAGACAAGGTTTTCCACAGTGACCTGGCAGTACCAGTGTGGGCTCACTTGTGAGGACAAGGCCGACCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CAA 72 bp | GTAGTCCGAGTTGCCTCTCCTCGCCACGTGCGTTGCTaGTGTCAGCAAATCCAGTCTCTGAAGGACATTCTC | + |
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Preference number: 6 (lower is better) Translates to: VVRVASPRHVRC*CQQIQSLKDIL Trigger: GAGAATGTCCTTCAGAGACTGGATTTGCTGACACAAGCAACGCACGTGGCGAGGAGAGGCAACTCGGACTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CAA 90 bp | CAGATCACTGTAGTCCGAGTTGCCTCTCCTCGCCACGTGCGTTGCTaGTGTCAGCAAATCCAGTCTCTGAAGGACATTCTCTCTGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: QITVVRVASPRHVRC*CQQIQSLKDILSEL Trigger: CAGCTCAGAGAGAATGTCCTTCAGAGACTGGATTTGCTGACACAAGCAACGCACGTGGCGAGGAGAGGCAACTCGGACTACAGTGATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CAA 72 bp | CTCCCCTTGATAATACTGGGTCAGAGGGTACAGAAGTaGGGGCCAACACAGCTCATTCCGGGTACAGTCGTA | + |
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Preference number: 6 (lower is better) Translates to: LPLIILGQRVQK*GPTQLIPGTVV Trigger: TACGACTGTACCCGGAATGAGCTGTGTTGGCCCCAACTTCTGTACCCTCTGACCCAGTATTATCAAGGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CCA 72 bp | ACCTGGATGAGCAGATGTGCTAAGCAGGATGCATTGTaGGAGGCTGAAACTAGCAGCATCTGCAGAACACAC | + |
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Preference number: 6 (lower is better) Translates to: TWMSRCAKQDAL*EAETSSICRTH Trigger: GTGTGTTCTGCAGATGCTGCTAGTTTCAGCCTCCCACAATGCATCCTGCTTAGCACATCTGCTCATCCAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CCA 72 bp | GGAGAAGCAGGACTGTGCAAACAGCTCTCTTACTTCTaGCTGACAGTCCTGGTCACAGCAGCATTGAATGTC | + |
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Preference number: 6 (lower is better) Translates to: GEAGLCKQLSYF*LTVLVTAALNV Trigger: GACATTCAATGCTGCTGTGACCAGGACTGTCAGCCAGAAGTAAGAGAGCTGTTTGCACAGTCCTGCTTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CAA 72 bp | TCCACCTGGATGAGCAGATGTGCTAAGCAGGATGCATaGTGGGAGGCTGAAACTAGCAGCATCTGCAGAACA | + |
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Preference number: 6 (lower is better) Translates to: STWMSRCAKQDA*WEAETSSICRT Trigger: TGTTCTGCAGATGCTGCTAGTTTCAGCCTCCCACAATGCATCCTGCTTAGCACATCTGCTCATCCAGGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS TCA 72 bp | GGGTTACAGATGTGTTGGGATAAATCTCCACCTGGATaGGCAGATGTGCTAAGCAGGATGCATTGTGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GLQMCWDKSPPG*ADVLSRMHCGR Trigger: CCTCCCACAATGCATCCTGCTTAGCACATCTGCTCATCCAGGTGGAGATTTATCCCAACACATCTGTAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CCA 72 bp | CTTGTCCAGGTCAATGGCTTCCTCATAGGTTACTGTTaGTGTGACCGGACCTCCTGTTGTGCGGATTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: LVQVNGFLIGYC*CDRTSCCADFH Trigger: ATGAAAATCCGCACAACAGGAGGTCCGGTCACACCAACAGTAACCTATGAGGAAGCCATTGACCTGGACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS TCA 72 bp | TCTCACCACCACTGTGATGGCTTAAAAACTTCACTGTaGATCTCTGGGTCATCATTCCTCTCTGCTGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: SHHHCDGLKTSL*ISGSSFLSAGH Trigger: GTGCCCAGCAGAGAGGAATGATGACCCAGAGATTCACAGTGAAGTTTTTAAGCCATCACAGTGGTGGTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS GCA 72 bp | AACTTCACTGTGAATCTCTGGGTCATCATTCCTCTCTaGTGGGCACTGATTTCTGCCCTGATGACTGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: NFTVNLWVIIPL*WALISALMTVM Trigger: CATCACAGTCATCAGGGCAGAAATCAGTGCCCAGCAGAGAGGAATGATGACCCAGAGATTCACAGTGAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CCA 72 bp | TTCACTGTGAATCTCTGGGTCATCATTCCTCTCTGCTaGGCACTGATTTCTGCCCTGATGACTGTGATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FTVNLWVIIPLC*ALISALMTVMS Trigger: AGACATCACAGTCATCAGGGCAGAAATCAGTGCCCAGCAGAGAGGAATGATGACCCAGAGATTCACAGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CCA 72 bp | CAATTTCATCTCGTCCTTGGTGCACTTCCAGGTCCATaGTACATACACTGTCAAAATTCCTCAGGAAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: QFHLVLGALPGP*YIHCQNSSGKP Trigger: TGGCTTTCCTGAGGAATTTTGACAGTGTATGTACCATGGACCTGGAAGTGCACCAAGGACGAGATGAAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS CAA 72 bp | GATTTTCATGTTCTCGAGGACAATTTCATCTCGTCCTaGGTGCACTTCCAGGTCCATGGTACATACACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: DFHVLEDNFISS*VHFQVHGTYTV Trigger: GACAGTGTATGTACCATGGACCTGGAAGTGCACCAAGGACGAGATGAAATTGTCCTCGAGAACATGAAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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| CDS TCA 72 bp | CCTGGATTTCCAGAAAATTCCTTCTCACCACCACTGTaGTGGCTTAAAAACTTCACTGTGAATCTCTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: PGFPENSFSPPL*WLKNFTVNLWV Trigger: GACCCAGAGATTCACAGTGAAGTTTTTAAGCCATCACAGTGGTGGTGAGAAGGAATTTTCTGGAAATCCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000239501.2 |
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