Pregenerated sensors for TCTE2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038347Ensembl transcript IDs: ENSMUST00000053376.12, ENSMUST00000127032.8, ENSMUST00000128194.8, ENSMUST00000130033.8, ENSMUST00000143162.8, ENSMUST00000148430.2, ENSMUST00000232858.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAACGCAGAGAGGATCCAGTGCTCTGGGCTGGAAGAGCCACCCATaGCTGAGCCAGGGAGACCCCAACACCTATTCACTGAGGAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: GTQRGSSALGWKSHP*LSQGDPNTYSLRRD Trigger: GTCCCTCCTCAGTGAATAGGTGTTGGGGTCTCCCTGGCTCAGTCATGGGTGGCTCTTCCAGCCCAGAGCACTGGATCCTCTCTGCGTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
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| 3UTR CCA 90 bp | CGGCCTTCTATGGACAAGGTGGGAGGACACAATGCAGGAGATCGGTaGCCTGATGTCGGGACACCTGGGTTGCTGGGATCAACACAGGAC | + |
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Preference number: 1 (lower is better) Translates to: RPSMDKVGGHNAGDR*PDVGTPGLLGSTQD Trigger: GTCCTGTGTTGATCCCAGCAACCCAGGTGTCCCGACATCAGGCCACCGATCTCCTGCATTGTGTCCTCCCACCTTGTCCATAGAAGGCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
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| 3UTR GCA 90 bp | AATTGGCTCTGGTGCTCAGAAGAAAGGAACGCAGAGAGGATCCAGTaGTCTGGGCTGGAAGAGCCACCCATGACTGAGCCAGGGAGACCC | + |
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Preference number: 1 (lower is better) Translates to: NWLWCSEERNAERIQ*SGLEEPPMTEPGRP Trigger: GGGTCTCCCTGGCTCAGTCATGGGTGGCTCTTCCAGCCCAGAGCACTGGATCCTCTCTGCGTTCCTTTCTTCTGAGCACCAGAGCCAATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
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| 3UTR TCA 90 bp | TTCTATGGACAAGGTGGGAGGACACAATGCAGGAGATCGGTGGCCTaGTGTCGGGACACCTGGGTTGCTGGGATCAACACAGGACAGATG | + |
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Preference number: 1 (lower is better) Translates to: FYGQGGRTQCRRSVA*CRDTWVAGINTGQM Trigger: CATCTGTCCTGTGTTGATCCCAGCAACCCAGGTGTCCCGACATCAGGCCACCGATCTCCTGCATTGTGTCCTCCCACCTTGTCCATAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
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| 3UTR CCA 90 bp | ATTAGCCGCCTGCAGGTAAATGTGGGAGGTGAGCCAAGTGGATTCTaGGAATGTGTGGCGGTTGCCTTGGCAATAGATGTGCGGGTTCCT | + |
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Preference number: 1 (lower is better) Translates to: ISRLQVNVGGEPSGF*ECVAVALAIDVRVP Trigger: AGGAACCCGCACATCTATTGCCAAGGCAACCGCCACACATTCCCAGAATCCACTTGGCTCACCTCCCACATTTACCTGCAGGCGGCTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
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| 3UTR CCA 90 bp | GAAGACAGAGGTGACATAGGCTTTGGAGATGGAGAAAGCTTGGTGTaGGGAGGGTCTCGTCACTCTTCCCTGGACCAGAATGACATAGGC | + |
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Preference number: 1 (lower is better) Translates to: EDRGDIGFGDGESLV*GGSRHSSLDQNDIG Trigger: GCCTATGTCATTCTGGTCCAGGGAAGAGTGACGAGACCCTCCCCACACCAAGCTTTCTCCATCTCCAAAGCCTATGTCACCTCTGTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128194.8 |
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| 3UTR GCA 90 bp | ACAAGGCTGTATGTCCTTAGTCAGGTGGAAAGCAGCACACACCTGTaGCCTAATTGGCTCTGGTGCTCAGAAGAAAGGAACGCAGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: TRLYVLSQVESSTHL*PNWLWCSEERNAER Trigger: CCTCTCTGCGTTCCTTTCTTCTGAGCACCAGAGCCAATTAGGGCACAGGTGTGTGCTGCTTTCCACCTGACTAAGGACATACAGCCTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
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| 3UTR CCA 90 bp | TATGTCCTTAGTCAGGTGGAAAGCAGCACACACCTGTGCCCTAATTaGCTCTGGTGCTCAGAAGAAAGGAACGCAGAGAGGATCCAGTGC | + |
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Preference number: 1 (lower is better) Translates to: YVLSQVESSTHLCPN*LWCSEERNAERIQC Trigger: GCACTGGATCCTCTCTGCGTTCCTTTCTTCTGAGCACCAGAGCCAATTAGGGCACAGGTGTGTGCTGCTTTCCACCTGACTAAGGACATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
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| 3UTR CCA 90 bp | GCTGACCTGTGTCTCAGCTCCGCTCACACCGTCATGTCATCCACGTaGCCATTTCATCGAGTATCTCTGAGACTGAGACTAAAGAGGCAT | + |
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Preference number: 1 (lower is better) Translates to: ADLCLSSAHTVMSST*PFHRVSLRLRLKRH Trigger: ATGCCTCTTTAGTCTCAGTCTCAGAGATACTCGATGAAATGGCCACGTGGATGACATGACGGTGTGAGCGGAGCTGAGACACAGGTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
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| 3UTR GCA 90 bp | GGTTCCTGTCAGCGATATGTGATGTCACTAGGTCCAGAGCTGATCTaGAGTGCTGATACCCTGATACCAACAGGTGTCATCAGCATGGGT | + |
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Preference number: 1 (lower is better) Translates to: GSCQRYVMSLGPELI*SADTLIPTGVISMG Trigger: ACCCATGCTGATGACACCTGTTGGTATCAGGGTATCAGCACTGCAGATCAGCTCTGGACCTAGTGACATCACATATCGCTGACAGGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
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| 3UTR TCA 90 bp | ATAACGGTGGTAAATTTAAAGACTGGCACCAGTGTGAAAGGTCCCTaGTGTCACCTTAGAGCCCTCTGGATCTCAAATGGCCAGTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: ITVVNLKTGTSVKGP*CHLRALWISNGQCP Trigger: GGGACACTGGCCATTTGAGATCCAGAGGGCTCTAAGGTGACATCAGGGACCTTTCACACTGGTGCCAGTCTTTAAATTTACCACCGTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
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| 3UTR CCA 90 bp | ATCTTGGTTTTACGGGCTGTGAACCCAATTCCTAAAGGCTTTGAGTaGATGGAAGCTGAAATAGGATCTGATGCCCGCCAGCTGTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: ILVLRAVNPIPKGFE*MEAEIGSDARQLSA Trigger: AGCAGACAGCTGGCGGGCATCAGATCCTATTTCAGCTTCCATCCACTCAAAGCCTTTAGGAATTGGGTTCACAGCCCGTAAAACCAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
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| 3UTR CCA 90 bp | CAATTAAAGCTCCAAAATTATTACCTCCATCTACACGGCCTTCTATaGACAAGGTGGGAGGACACAATGCAGGAGATCGGTGGCCTGATG | + |
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Preference number: 1 (lower is better) Translates to: QLKLQNYYLHLHGLL*TRWEDTMQEIGGLM Trigger: CATCAGGCCACCGATCTCCTGCATTGTGTCCTCCCACCTTGTCCATAGAAGGCCGTGTAGATGGAGGTAATAATTTTGGAGCTTTAATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
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| 3UTR TCA 90 bp | GCTGGGATCAACACAGGACAGATGTCACAATGGAGAACGCCTGAGTaGGCGTGCCATTTTTATAGTCACTGTAGAGATGGTATCTATACC | + |
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Preference number: 1 (lower is better) Translates to: AGINTGQMSQWRTPE*ACHFYSHCRDGIYT Trigger: GGTATAGATACCATCTCTACAGTGACTATAAAAATGGCACGCTCACTCAGGCGTTCTCCATTGTGACATCTGTCCTGTGTTGATCCCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
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| 3UTR TCA 90 bp | CCTGTATCAGATGTGTTGGTAGTGTGTGCATCTGCTTGTGTCATGTaGATACATACTGGAAGAGAAAGGAGGGGCTATGAGAAAAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: PVSDVLVVCASACVM*IHTGRERRGYEKSH Trigger: GTGGCTTTTCTCATAGCCCCTCCTTTCTCTTCCAGTATGTATTCACATGACACAAGCAGATGCACACACTACCAACACATCTGATACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
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| 3UTR GCA 90 bp | TGGCCAGTGTCCCATGAGTCACTGAGAGTAAAGAGTCTACTTCCATaGTTCCTTCAGCTTTACATAGAAGAGATCTTGGTTTTACGGGCT | + |
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Preference number: 1 (lower is better) Translates to: WPVSHESLRVKSLLP*FLQLYIEEILVLRA Trigger: AGCCCGTAAAACCAAGATCTCTTCTATGTAAAGCTGAAGGAAGCATGGAAGTAGACTCTTTACTCTCAGTGACTCATGGGACACTGGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
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| 3UTR GCA 90 bp | TGTTTATTTAATACCTGTATCAGATGTGTTGGTAGTGTGTGCATCTaGTTGTGTCATGTGAATACATACTGGAAGAGAAAGGAGGGGCTA | + |
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Preference number: 1 (lower is better) Translates to: CLFNTCIRCVGSVCI*LCHVNTYWKRKEGL Trigger: TAGCCCCTCCTTTCTCTTCCAGTATGTATTCACATGACACAAGCAGATGCACACACTACCAACACATCTGATACAGGTATTAAATAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
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| 3UTR TCA 90 bp | CTGAGTGGTTTAGACGATGAACAGTGTGGCCGTGCTTATTTGAAATaGAATAGAGAGAACCAACTCTTACTTTCAAGCATTTCTTCTTAT | + |
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Preference number: 1 (lower is better) Translates to: LSGLDDEQCGRAYLK*NRENQLLLSSISSY Trigger: ATAAGAAGAAATGCTTGAAAGTAAGAGTTGGTTCTCTCTATTTCATTTCAAATAAGCACGGCCACACTGTTCATCGTCTAAACCACTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGTGCTCAGAAGAAAGGAACGCAGAGAGGATCCAGTGCTCTGGGCTGGAAGAAGAGCCACCCATGACTaGGCCAGGGAGACCCCAACA | + |
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Preference number: 2 (lower is better) Translates to: LVLRRKERREDPVLWAGRRATHD*ARETPT Trigger: TGTTGGGGTCTCCCTGGCTCAGTCATGGGTGGCTCT...TCTTCCAGCCCAGAGCACTGGATCCTCTCTGCGTTCCTTTCTTCTGAGCACCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
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| 3UTR CAA 90 bp | GGACACAATGCAGGAGATCGGTGGCCTGATGTCGGGACACCTGGGTaGCTGGGATCAACACAGGACAGATGTCACAATGGAGAACGCCTG | + |
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Preference number: 2 (lower is better) Translates to: GHNAGDRWPDVGTPG*LGSTQDRCHNGERL Trigger: CAGGCGTTCTCCATTGTGACATCTGTCCTGTGTTGATCCCAGCAACCCAGGTGTCCCGACATCAGGCCACCGATCTCCTGCATTGTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
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| 3UTR-3UTR CCA 90 bp | GGTAACCGCATAGCATTTTGGTGCTCATCCACAAAGCCTCACCTGCCTGGGGTATGCCAAGCCTCCGAGTaGCCTTCTCGGGATCCCCTA | + |
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Preference number: 2 (lower is better) Translates to: GNRIAFWCSSTKPHLPGVCQASE*PSRDPL Trigger: TAGGGGATCCCGAGAAGGCCACTCGGAGGCTTGGCA...TACCCCAGGCAGGTGAGGCTTTGTGGATGAGCACCAAAATGCTATGCGGTTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGCAGGGTGCGGGGGTAGAGAGAGGGGTCAGAGGGATCTGCCTGTTTATTTGCTTCTATGGACAAGGTaGGAGGACACAATGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GAGCGGRERGQRDLPVYLLLWTR*EDTMQE Trigger: CTCCTGCATTGTGTCCTCCCACCTTGTCCATAGAAG...CAAATAAACAGGCAGATCCCTCTGACCCCTCTCTCTACCCCCGCACCCTGCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTGCATCTGCTTGTGTCATGTGAATACATACTGGAAGAGAAAGGAGGGGCTATGGAAGAGCCACCCATaGCTGAGCCAGGGAGACCCC | + |
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Preference number: 2 (lower is better) Translates to: VCICLCHVNTYWKRKEGLWKSHP*LSQGDP Trigger: GGGGTCTCCCTGGCTCAGTCATGGGTGGCTCTTCCA...TAGCCCCTCCTTTCTCTTCCAGTATGTATTCACATGACACAAGCAGATGCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
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| 3UTR-3UTR TCA 90 bp | TCGAGGTCTCAAGATGAGCAGAGCAGTGCTGTTAGAATGCTGTGTGACATCACTAGGAGATCGGTGGCCTaGTGTCGGGACACCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: SRSQDEQSSAVRMLCDITRRSVA*CRDTWV Trigger: AACCCAGGTGTCCCGACATCAGGCCACCGATCTCCT...AGTGATGTCACACAGCATTCTAACAGCACTGCTCTGCTCATCTTGAGACCTCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGAAGAGCCACCCATGACTGAGCCAGGGAGACCCCAACACCTATTCACTGAGGGGTGCTCTATGTCATaGTTTGAGTGGATGTATCCC | + |
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Preference number: 2 (lower is better) Translates to: LEEPPMTEPGRPQHLFTEGCSMS*FEWMYP Trigger: GGGATACATCCACTCAAAGCATGACATAGAGCACCC...CTCAGTGAATAGGTGTTGGGGTCTCCCTGGCTCAGTCATGGGTGGCTCTTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGACCCCAACACCTATTCACTGAGGAGGGACCCACTGGTTCCCAGCCTAACATGTCATGCTTTGAGTaGATGTATCCCAGCAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: GRPQHLFTEEGPTGSQPNMSCFE*MYPSSL Trigger: GAGACTGCTGGGATACATCCACTCAAAGCATGACAT...GTTAGGCTGGGAACCAGTGGGTCCCTCCTCAGTGAATAGGTGTTGGGGTCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
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| 3UTR-3UTR TCA 90 bp | GAATGTGTGGCGGTTGCCTTGGCAATAGATGTGCGGGTTCCTGTCAGCGATATGATGGCCAGTGTCCCATaGGTCACTGAGAGTAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: ECVAVALAIDVRVPVSDMMASVP*VTESKE Trigger: CTCTTTACTCTCAGTGACTCATGGGACACTGGCCAT...CATATCGCTGACAGGAACCCGCACATCTATTGCCAAGGCAACCGCCACACATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
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| 3UTR-3UTR TCA 90 bp | GATACCAACAGGTGTCATCAGCATGGGTCAGTCAGAGGCTTGTGTGAGCAGGAAATGGCCAGTGTCCCATaGGTCACTGAGAGTAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: DTNRCHQHGSVRGLCEQEMASVP*VTESKE Trigger: CTCTTTACTCTCAGTGACTCATGGGACACTGGCCAT...TTCCTGCTCACACAAGCCTCTGACTGACCCATGCTGATGACACCTGTTGGTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
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| 3UTR-3UTR CCA 90 bp | CACGTGGCCATTTCATCGAGTATCTCTGAGACTGAGACTAAAGAGGCATCAATTTGCCAAGCCTCCGAGTaGCCTTCTCGGGATCCCCTA | + |
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Preference number: 2 (lower is better) Translates to: HVAISSSISETETKEASICQASE*PSRDPL Trigger: TAGGGGATCCCGAGAAGGCCACTCGGAGGCTTGGCA...AATTGATGCCTCTTTAGTCTCAGTCTCAGAGATACTCGATGAAATGGCCACGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 |
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| 3UTR-3UTR TCA 90 bp | GTGCATCTGCTTGTGTCATGTGAATACATACTGGAAGAGAAAGGAGGGGCTATGCCAACACCTATTCACTaGGGAGGGACCCACTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: VHLLVSCEYILEEKGGAMPTPIH*GGTHWF Trigger: GAACCAGTGGGTCCCTCCTCAGTGAATAGGTGTTGG...CATAGCCCCTCCTTTCTCTTCCAGTATGTATTCACATGACACAAGCAGATGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
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| 3UTR-3UTR TCA 90 bp | CATCTGCTTGTGTCATGTGAATACATACTGGAAGAGAAAGGAGGGGCTATGAGACCAACACCTATTCACTaGGGAGGGACCCACTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: HLLVSCEYILEEKGGAMRPTPIH*GGTHWF Trigger: GAACCAGTGGGTCCCTCCTCAGTGAATAGGTGTTGG...TCTCATAGCCCCTCCTTTCTCTTCCAGTATGTATTCACATGACACAAGCAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
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| 3UTR-3UTR GCA 90 bp | GATACCAACAGGTGTCATCAGCATGGGTCAGTCAGAGGCTTGTGTGAGCAGGAAGCAGTGCTGTTAGAATaGTGTGTGACATCACTGAAG | + |
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Preference number: 2 (lower is better) Translates to: DTNRCHQHGSVRGLCEQEAVLLE*CVTSLK Trigger: CTTCAGTGATGTCACACAGCATTCTAACAGCACTGC...TTCCTGCTCACACAAGCCTCTGACTGACCCATGCTGATGACACCTGTTGGTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
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| 3UTR-3UTR CCA 90 bp | GGATGTATCCCAGCAGTCTCTTTCCTCTGCTACCCATTCTCCAAGCTGAGGACAATGTCATGCTTTGAGTaGATGTATCCCAGCAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: GCIPAVSFLCYPFSKLRTMSCFE*MYPSSL Trigger: GAGACTGCTGGGATACATCCACTCAAAGCATGACAT...TGTCCTCAGCTTGGAGAATGGGTAGCAGAGGAAAGAGACTGCTGGGATACATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143162.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAGTGGAATTACAACCAGACACATCCCATCTTCCACAAGCTTAGTTAAGCACGGGGATGCCTGCTTCTaGGACAGCCTCTCTGTTGTA | + |
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Preference number: 2 (lower is better) Translates to: ISGITTRHIPSSTSLVKHGDACF*DSLSVV Trigger: TACAACAGAGAGGCTGTCTCAGAAGCAGGCATCCCC...GTGCTTAACTAAGCTTGTGGAAGATGGGATGTGTCTGGTTGTAATTCCACTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128194.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTGCATCTGCTTGTGTCATGTGAATACATACTGGAAGAGAAAGGAGGGGCTACCTAATTGGCTCTGGTaGTCAGAAGAAAGGAACGCA | + |
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Preference number: 2 (lower is better) Translates to: VCICLCHVNTYWKRKEGLPNWLW*SEERNA Trigger: TGCGTTCCTTTCTTCTGAGCACCAGAGCCAATTAGG...TAGCCCCTCCTTTCTCTTCCAGTATGTATTCACATGACACAAGCAGATGCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
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| 3UTR-3UTR TCA 90 bp | ATCAGATGTGTTGGTAGTGTGTGCATCTGCTTGTGTCATGTGAATACATACTGGCTCTATGTCATGCTTTaGGTGGATGTATCCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: IRCVGSVCICLCHVNTYWLYVML*VDVSQQ Trigger: CTGCTGGGATACATCCACTCAAAGCATGACATAGAG...CCAGTATGTATTCACATGACACAAGCAGATGCACACACTACCAACACATCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
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| 3UTR CAA 90 bp | AAGAGTCTACTTCCATGCTTCCTTCAGCTTTACATAGAAGAGATCTaGGTTTTACGGGCTGTGAACCCAATTCCTAAAGGCTTTGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: KSLLPCFLQLYIEEI*VLRAVNPIPKGFEW Trigger: CCACTCAAAGCCTTTAGGAATTGGGTTCACAGCCCGTAAAACCAAGATCTCTTCTATGTAAAGCTGAAGGAAGCATGGAAGTAGACTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
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| 3UTR-3UTR TCA 90 bp | CATGTTTATTTAATACCTGTATCAGATGTGTTGGTAGTGTGTGCATCTGCTTGTCTCTATGTCATGCTTTaGGTGGATGTATCCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: HVYLIPVSDVLVVCASACLYVML*VDVSQQ Trigger: CTGCTGGGATACATCCACTCAAAGCATGACATAGAG...ACAAGCAGATGCACACACTACCAACACATCTGATACAGGTATTAAATAAACATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
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| 3UTR-3UTR TCA 90 bp | ATCAGATGTGTTGGTAGTGTGTGCATCTGCTTGTGTCATGTGAATACATACTGGTCTGCTTGTGTCATGTaGATACATACTGGAAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: IRCVGSVCICLCHVNTYWSACVM*IHTGRE Trigger: TTCTCTTCCAGTATGTATTCACATGACACAAGCAGA...CCAGTATGTATTCACATGACACAAGCAGATGCACACACTACCAACACATCTGAT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
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| 3UTR-3UTR CAA 90 bp | GCCTCACCTGCCTGGGGTAAGAATGCTGACCTGTGTCTCAGCTCCGCTCACACCGTCGGGACACCTGGGTaGCTGGGATCAACACAGGAC | + |
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Preference number: 3 (lower is better) Translates to: ASPAWGKNADLCLSSAHTVGTPG*LGSTQD Trigger: GTCCTGTGTTGATCCCAGCAACCCAGGTGTCCCGAC...GGTGTGAGCGGAGCTGAGACACAGGTCAGCATTCTTACCCCAGGCAGGTGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
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| 3UTR TCA 72 bp | AGAGGATCCAGTGCTCTGGGCTGGAAGAGCCACCCATaGCTGAGCCAGGGAGACCCCAACACCTATTCACTG | + |
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Preference number: 3 (lower is better) Translates to: RGSSALGWKSHP*LSQGDPNTYSL Trigger: CAGTGAATAGGTGTTGGGGTCTCCCTGGCTCAGTCATGGGTGGCTCTTCCAGCCCAGAGCACTGGATCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
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| 3UTR TCA 72 bp | CAAGGTGGGAGGACACAATGCAGGAGATCGGTGGCCTaGTGTCGGGACACCTGGGTTGCTGGGATCAACACA | + |
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Preference number: 3 (lower is better) Translates to: QGGRTQCRRSVA*CRDTWVAGINT Trigger: TGTGTTGATCCCAGCAACCCAGGTGTCCCGACATCAGGCCACCGATCTCCTGCATTGTGTCCTCCCACCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
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| 3UTR GCA 72 bp | TGGTGCTCAGAAGAAAGGAACGCAGAGAGGATCCAGTaGTCTGGGCTGGAAGAGCCACCCATGACTGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: WCSEERNAERIQ*SGLEEPPMTEP Trigger: TGGCTCAGTCATGGGTGGCTCTTCCAGCCCAGAGCACTGGATCCTCTCTGCGTTCCTTTCTTCTGAGCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
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| 3UTR GCA 72 bp | CAGGAGATCGGTGGCCTGATGTCGGGACACCTGGGTTaGTGGGATCAACACAGGACAGATGTCACAATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QEIGGLMSGHLG*WDQHRTDVTME Trigger: CTCCATTGTGACATCTGTCCTGTGTTGATCCCAGCAACCCAGGTGTCCCGACATCAGGCCACCGATCTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
||
| 3UTR GCA 72 bp | GCACCAGCAGCCCGAGGTAACCGCATAGCATTTTGGTaGTCATCCACAAAGCCTCACCTGCCTGGGGTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: APAARGNRIAFW*SSTKPHLPGVR Trigger: TCTTACCCCAGGCAGGTGAGGCTTTGTGGATGAGCACCAAAATGCTATGCGGTTACCTCGGGCTGCTGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
||
| 3UTR GCA 72 bp | CAGGGTGCGGGGGTAGAGAGAGGGGTCAGAGGGATCTaGCTGTTTATTTGTATAGTGACATTAGCCGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QGAGVERGVRGI*LFICIVTLAAC Trigger: GCAGGCGGCTAATGTCACTATACAAATAAACAGGCAGATCCCTCTGACCCCTCTCTCTACCCCCGCACCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
||
| 3UTR CCA 72 bp | GAGATCGGTGGCCTGATGTCGGGACACCTGGGTTGCTaGGATCAACACAGGACAGATGTCACAATGGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: EIGGLMSGHLGC*DQHRTDVTMEN Trigger: GTTCTCCATTGTGACATCTGTCCTGTGTTGATCCCAGCAACCCAGGTGTCCCGACATCAGGCCACCGATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
||
| 3UTR CCA 72 bp | TTAGCACCAGCAGCCCGAGGTAACCGCATAGCATTTTaGTGCTCATCCACAAAGCCTCACCTGCCTGGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LAPAARGNRIAF*CSSTKPHLPGV Trigger: TACCCCAGGCAGGTGAGGCTTTGTGGATGAGCACCAAAATGCTATGCGGTTACCTCGGGCTGCTGGTGCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
||
| 3UTR GCA 72 bp | GAAAGCAGCACACACCTGTGCCCTAATTGGCTCTGGTaGTCAGAAGAAAGGAACGCAGAGAGGATCCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: ESSTHLCPNWLW*SEERNAERIQC Trigger: GCACTGGATCCTCTCTGCGTTCCTTTCTTCTGAGCACCAGAGCCAATTAGGGCACAGGTGTGTGCTGCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
||
| 3UTR CCA 72 bp | AGTCAGGTGGAAAGCAGCACACACCTGTGCCCTAATTaGCTCTGGTGCTCAGAAGAAAGGAACGCAGAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SQVESSTHLCPN*LWCSEERNAER Trigger: CCTCTCTGCGTTCCTTTCTTCTGAGCACCAGAGCCAATTAGGGCACAGGTGTGTGCTGCTTTCCACCTGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
||
| 3UTR CCA 72 bp | GGTGACATAGGCTTTGGAGATGGAGAAAGCTTGGTGTaGGGAGGGTCTCGTCACTCTTCCCTGGACCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: GDIGFGDGESLV*GGSRHSSLDQN Trigger: ATTCTGGTCCAGGGAAGAGTGACGAGACCCTCCCCACACCAAGCTTTCTCCATCTCCAAAGCCTATGTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128194.8 |
||
| 3UTR CCA 72 bp | AGCATTTTGGTGCTCATCCACAAAGCCTCACCTGCCTaGGGTAAGAATGCTGACCTGTGTCTCAGCTCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: SILVLIHKASPA*GKNADLCLSSA Trigger: AGCGGAGCTGAGACACAGGTCAGCATTCTTACCCCAGGCAGGTGAGGCTTTGTGGATGAGCACCAAAATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
||
| 3UTR CCA 72 bp | TATTACCTCCATCTACACGGCCTTCTATGGACAAGGTaGGAGGACACAATGCAGGAGATCGGTGGCCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: YYLHLHGLLWTR*EDTMQEIGGLM Trigger: CATCAGGCCACCGATCTCCTGCATTGTGTCCTCCCACCTTGTCCATAGAAGGCCGTGTAGATGGAGGTAATA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
||
| 3UTR CCA 72 bp | CTGCAGGTAAATGTGGGAGGTGAGCCAAGTGGATTCTaGGAATGTGTGGCGGTTGCCTTGGCAATAGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: LQVNVGGEPSGF*ECVAVALAIDV Trigger: CACATCTATTGCCAAGGCAACCGCCACACATTCCCAGAATCCACTTGGCTCACCTCCCACATTTACCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
||
| 3UTR GCA 72 bp | TATGTCCTTAGTCAGGTGGAAAGCAGCACACACCTGTaGCCTAATTGGCTCTGGTGCTCAGAAGAAAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: YVLSQVESSTHL*PNWLWCSEERN Trigger: GTTCCTTTCTTCTGAGCACCAGAGCCAATTAGGGCACAGGTGTGTGCTGCTTTCCACCTGACTAAGGACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
||
| 3UTR GCA 72 bp | CAGCGATATGTGATGTCACTAGGTCCAGAGCTGATCTaGAGTGCTGATACCCTGATACCAACAGGTGTCATC | + |
|
Preference number: 3 (lower is better) Translates to: QRYVMSLGPELI*SADTLIPTGVI Trigger: GATGACACCTGTTGGTATCAGGGTATCAGCACTGCAGATCAGCTCTGGACCTAGTGACATCACATATCGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
||
| 3UTR CCA 72 bp | TTACGGGCTGTGAACCCAATTCCTAAAGGCTTTGAGTaGATGGAAGCTGAAATAGGATCTGATGCCCGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LRAVNPIPKGFE*MEAEIGSDARQ Trigger: CTGGCGGGCATCAGATCCTATTTCAGCTTCCATCCACTCAAAGCCTTTAGGAATTGGGTTCACAGCCCGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGAGAGTAAAGAGTCTACTTCCATGCTTCCTTCAGCTTTACATAGAAGAGATCGTCGGGACACCTGGGTaGCTGGGATCAACACAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: LRVKSLLPCFLQLYIEEIVGTPG*LGSTQD Trigger: GTCCTGTGTTGATCCCAGCAACCCAGGTGTCCCGAC...GATCTCTTCTATGTAAAGCTGAAGGAAGCATGGAAGTAGACTCTTTACTCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
||
| 3UTR TCA 72 bp | GTAAATTTAAAGACTGGCACCAGTGTGAAAGGTCCCTaGTGTCACCTTAGAGCCCTCTGGATCTCAAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: VNLKTGTSVKGP*CHLRALWISNG Trigger: GCCATTTGAGATCCAGAGGGCTCTAAGGTGACATCAGGGACCTTTCACACTGGTGCCAGTCTTTAAATTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
||
| 3UTR TCA 72 bp | CATGTGAATACATACTGGAAGAGAAAGGAGGGGCTATaGGAAAAGCCACCACAAGGCTGTATGTCCTTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: HVNTYWKRKEGL*EKPPQGCMSLV Trigger: GACTAAGGACATACAGCCTTGTGGTGGCTTTTCTCATAGCCCCTCCTTTCTCTTCCAGTATGTATTCACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
||
| 3UTR TCA 72 bp | GATGTGTTGGTAGTGTGTGCATCTGCTTGTGTCATGTaGATACATACTGGAAGAGAAAGGAGGGGCTATGAG | + |
|
Preference number: 3 (lower is better) Translates to: DVLVVCASACVM*IHTGRERRGYE Trigger: CTCATAGCCCCTCCTTTCTCTTCCAGTATGTATTCACATGACACAAGCAGATGCACACACTACCAACACATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
||
| 3UTR TCA 72 bp | TTAAGCACACACTGTATGATGGGGGATGCCTGCTTCTaGGACAGCCTCTCTGTTGTAAATTTGCAAACTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSTHCMMGDACF*DSLSVVNLQTL Trigger: CAGAGTTTGCAAATTTACAACAGAGAGGCTGTCTCAGAAGCAGGCATCCCCCATCATACAGTGTGTGCTTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128194.8 |
||
| 3UTR TCA 72 bp | TCAACTTTAGAGTTTGGGGTGCTCTATGTCATGCTTTaGGTGGATGTATCCCAGCAGTCTCTTTCCTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: STLEFGVLYVML*VDVSQQSLSSA Trigger: AGCAGAGGAAAGAGACTGCTGGGATACATCCACTCAAAGCATGACATAGAGCACCCCAAACTCTAAAGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143162.8 |
||
| 3UTR-3UTR CAA 90 bp | AAATCATGTTTATTTAATACCTGTATCAGATGTGTTGGTAGTGTGTGCATCTGCAGTGTGTGCATCTGCTaGTGTCATGTGAATACATAC | + |
|
Preference number: 3 (lower is better) Translates to: KSCLFNTCIRCVGSVCICSVCIC*CHVNTY Trigger: GTATGTATTCACATGACACAAGCAGATGCACACACT...GCAGATGCACACACTACCAACACATCTGATACAGGTATTAAATAAACATGATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
||
| 3UTR TCA 72 bp | ATTAGGTTGATTGGGTGTCCTTGCCTGTGGAGGTTATaGAATCATGTTTATTTAATACCTGTATCAGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: IRLIGCPCLWRL*NHVYLIPVSDV Trigger: CACATCTGATACAGGTATTAAATAAACATGATTTCATAACCTCCACAGGCAAGGACACCCAATCAACCTAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
||
| 3UTR TCA 72 bp | TTAGACGATGAACAGTGTGGCCGTGCTTATTTGAAATaGAATAGAGAGAACCAACTCTTACTTTCAAGCATT | + |
|
Preference number: 3 (lower is better) Translates to: LDDEQCGRAYLK*NRENQLLLSSI Trigger: AATGCTTGAAAGTAAGAGTTGGTTCTCTCTATTTCATTTCAAATAAGCACGGCCACACTGTTCATCGTCTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGGAGACCCCAACACCTATTCACTGAGGAGGGACCCACTGGTTCCCAGCCTGAGATGGAGAAAGCTTaGTGTGGGGAGGGTCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGRPQHLFTEEGPTGSQPEMEKA*CGEGLV Trigger: GACGAGACCCTCCCCACACCAAGCTTTCTCCATCTC...AGGCTGGGAACCAGTGGGTCCCTCCTCAGTGAATAGGTGTTGGGGTCTCCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGACCCCAACACCTATTCACTGAGGAGGGACCCACTGGTTCCCAGCCTAACGGAGAAAGCTTGGTGTaGGGAGGGTCTCGTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRPQHLFTEEGPTGSQPNGESLV*GGSRHS Trigger: AGAGTGACGAGACCCTCCCCACACCAAGCTTTCTCC...GTTAGGCTGGGAACCAGTGGGTCCCTCCTCAGTGAATAGGTGTTGGGGTCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCTGGTGCTCAGAAGAAAGGAACGCAGAGAGGATCCAGTGCTCTGGGCTGGCATAGGCTTTGGAGATaGAGAAAGCTTGGTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSGAQKKGTQRGSSALGWHRLWR*RKLGVG Trigger: CCCCACACCAAGCTTTCTCCATCTCCAAAGCCTATG...CCAGCCCAGAGCACTGGATCCTCTCTGCGTTCCTTTCTTCTGAGCACCAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
||
| CDS-3UTR TCA 90 bp | AGGTCCCCTAATGAACAACCCTGTCACCCAGGCACGGAGCCCTCTGTAGCAAGGTTCATTCTGGAAGGCTaGAGACTCCAGTGGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RSPNEQPCHPGTEPSVARFILEG*RLQWKK Trigger: CTTCTTCCACTGGAGTCTTCAGCCTTCCAGAATGAA...CCTTGCTACAGAGGGCTCCGTGCCTGGGTGACAGGGTTGTTCATTAGGGGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053376.12 |
||
| CDS-3UTR CCA 90 bp | AGGGACCCACTGGTTCCCAGCCTAACTCTGAAGCTGAAGTTCCAGTACAGATGGGAGATGGAGAAAGCTTaGTGTGGGGAGGGTCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RDPLVPSLTLKLKFQYRWEMEKA*CGEGLV Trigger: GACGAGACCCTCCCCACACCAAGCTTTCTCCATCTC...CCATCTGTACTGGAACTTCAGCTTCAGAGTTAGGCTGGGAACCAGTGGGTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
||
| CDS-3UTR CCA 90 bp | TTGAGTGGATGTATCCCAGCAGTCTCTTTCCTCTGCTACCCATTCTCCAAGCTGTGCCAAGCCTCCGAGTaGCCTTCTCGGGATCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LSGCIPAVSFLCYPFSKLCQASE*PSRDPL Trigger: TAGGGGATCCCGAGAAGGCCACTCGGAGGCTTGGCA...CAGCTTGGAGAATGGGTAGCAGAGGAAAGAGACTGCTGGGATACATCCACTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143162.8 |
||
| CDS-3UTR CCA 90 bp | AGGAGGGACCCACTGGTTCCCAGCCTAACTCTGAAGCTGAAGTTCCAGTACAGAGCCTTCCCTGGAGCATaGTATCACTTGAACGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRDPLVPSLTLKLKFQYRAFPGA*YHLNVS Trigger: GGACACGTTCAAGTGATACCATGCTCCAGGGAAGGC...TCTGTACTGGAACTTCAGCTTCAGAGTTAGGCTGGGAACCAGTGGGTCCCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143162.8 |
||
| CDS-3UTR TCA 90 bp | CTCCGAGTGGCCTTCTCGGGATCCCCTAAATTATTCATCCCTCCAACAGATGTTGGGGATGCCTGCTTCTaGGACAGCCTCTCTGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LRVAFSGSPKLFIPPTDVGDACF*DSLSVV Trigger: TACAACAGAGAGGCTGTCTCAGAAGCAGGCATCCCC...AACATCTGTTGGAGGGATGAATAATTTAGGGGATCCCGAGAAGGCCACTCGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127032.8 |
||
| CDS-3UTR GCA 90 bp | TTTTGGTGCTCATCCACAAAGCCTCACCTGCCTGGGGTAAGAATGCTGACCTGTCTGTATGATGGGGGATaGCTGCTTCTGAGACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FWCSSTKPHLPGVRMLTCLYDGG*LLLRQP Trigger: AGGCTGTCTCAGAAGCAGGCATCCCCCATCATACAG...ACAGGTCAGCATTCTTACCCCAGGCAGGTGAGGCTTTGTGGATGAGCACCAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127032.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTCATCCACAAAGCCTCACCTGCCTGGGGTAAGAATGCTGACCTGTGTCTCGATGAAGGGTTTCCATaGGCCAGCTTTTTCTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLIHKASPAWGKNADLCLDEGFP*ASFFYL Trigger: AAGGTAGAAAAAGCTGGCTCATGGAAACCCTTCATC...GAGACACAGGTCAGCATTCTTACCCCAGGCAGGTGAGGCTTTGTGGATGAGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130033.8 |
||
| CDS-3UTR TCA 90 bp | TTTATAGTCACTGTAGAGATGGTATCTATACCCATGGGTCGTGAGCACACCAGTTCAAATGTCAGCACATaGGCTGCTGCCGGGAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: FIVTVEMVSIPMGREHTSSNVST*AAAGRP Trigger: TGGTCTCCCGGCAGCAGCTCATGTGCTGACATTTGA...ACTGGTGTGCTCACGACCCATGGGTATAGATACCATCTCTACAGTGACTATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127032.8 |
||
| 3UTR CAA 72 bp | GGTAGAGAGAGGGGTCAGAGGGATCTGCCTGTTTATTaGTATAGTGACATTAGCCGCCTGCAGGTAAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRERGQRDLPVY*YSDISRLQVNV Trigger: CACATTTACCTGCAGGCGGCTAATGTCACTATACAAATAAACAGGCAGATCCCTCTGACCCCTCTCTCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000127032.8 ENSMUST00000130033.8 ENSMUST00000148430.2 |
||
| CDS-3UTR TCA 90 bp | GAGGCATCAATTAAAGCTCCAAAATTATTACCTCCATCTACACGGCCTTCTATGTCGGGAGGCAGAGGATaGAGGGTTTCCATGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EASIKAPKLLPPSTRPSMSGGRG*RVSMSQ Trigger: CTGGCTCATGGAAACCCTTCATCCTCTGCCTCCCGA...CATAGAAGGCCGTGTAGATGGAGGTAATAATTTTGGAGCTTTAATTGATGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130033.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGTATCAGATGTGTTGGTAGTGTGTGCATCTGCTTGTGTCATGTGAATACAGGAGAAAGCTTGGTGTaGGGAGGGTCTCGTCACTCT | + |
|
Preference number: 4 (lower is better) Translates to: TCIRCVGSVCICLCHVNTGESLV*GGSRHS Trigger: AGAGTGACGAGACCCTCCCCACACCAAGCTTTCTCC...TGTATTCACATGACACAAGCAGATGCACACACTACCAACACATCTGATACAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
||
| CDS-3UTR CCA 90 bp | AAGATGAGCAGAGCAGTGCTGTTAGAATGCTGTGTGACATCACTGAAGATCATAGCCTTCCCTGGAGCATaGTATCACTTGAACGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KMSRAVLLECCVTSLKIIAFPGA*YHLNVS Trigger: GGACACGTTCAAGTGATACCATGCTCCAGGGAAGGC...TATGATCTTCAGTGATGTCACACAGCATTCTAACAGCACTGCTCTGCTCATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148430.2 |
||
| 3UTR CAA 72 bp | TTCAACTTTAGAGTTTGGGGTGCTCTATGTCATGCTTaGAGTGGATGTATCCCAGCAGTCTCTTTCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FNFRVWGALCHA*SGCIPAVSFLC Trigger: GCAGAGGAAAGAGACTGCTGGGATACATCCACTCAAAGCATGACATAGAGCACCCCAAACTCTAAAGTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143162.8 |
||
| 3UTR CAA 72 bp | ACCTGTATCAGATGTGTTGGTAGTGTGTGCATCTGCTaGTGTCATGTGAATACATACTGGAAGAGAAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TCIRCVGSVCIC*CHVNTYWKRKE Trigger: CTCCTTTCTCTTCCAGTATGTATTCACATGACACAAGCAGATGCACACACTACCAACACATCTGATACAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
||
| CDS CCA 90 bp | GTGGGGAGGGTCTCGTCACTCTTCCCTGGCTGCCAAGCCTCCGAGTaGCCTTCTCGGGATCCCCTAAATTATTCATCCCTCCAACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: VGRVSSLFPGCQASE*PSRDPLNYSSLQQM Trigger: CATCTGTTGGAGGGATGAATAATTTAGGGGATCCCGAGAAGGCCACTCGGAGGCTTGGCAGCCAGGGAAGAGTGACGAGACCCTCCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143162.8 |
||
| CDS CCA 90 bp | GAGATGGAGAAAGCTTGGTGTGGGGAGGGTCTCGTCACTCTTCCCTaGCTGCCAAGCCTCCGAGTGGCCTTCTCGGGATCCCCTAAATTA | + |
|
Preference number: 5 (lower is better) Translates to: EMEKAWCGEGLVTLP*LPSLRVAFSGSPKL Trigger: TAATTTAGGGGATCCCGAGAAGGCCACTCGGAGGCTTGGCAGCCAGGGAAGAGTGACGAGACCCTCCCCACACCAAGCTTTCTCCATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143162.8 |
||
| CDS TCA 90 bp | AGATGGAGAAAGCTTGGTGTGGGGAGGGTCTCGTCACTCTTCCCTTaGACGTGTCCAATCACAGTAGCTGCTATCTCCTTGTGGTTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RWRKLGVGRVSSLFP*TCPITVAAISLWFG Trigger: CCCGAACCACAAGGAGATAGCAGCTACTGTGATTGGACACGTTCAAGGGAAGAGTGACGAGACCCTCCCCACACCAAGCTTTCTCCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053376.12 |
||
| CDS CCA 90 bp | GAAGACAGAGGTGACATAGGCTTTGGAGATGGAGAAAGCTTGGTGTaGGGAGGGTCTCGTCACTCTTCCCTTGAACGTGTCCAATCACAG | + |
|
Preference number: 5 (lower is better) Translates to: EDRGDIGFGDGESLV*GGSRHSSLERVQSQ Trigger: CTGTGATTGGACACGTTCAAGGGAAGAGTGACGAGACCCTCCCCACACCAAGCTTTCTCCATCTCCAAAGCCTATGTCACCTCTGTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053376.12 |
||
| CDS GCA 90 bp | TTCTGGAAGGCTGAAGACTCCAGTGGAAGAAGACCTTCCGCTTACTaGAGCAGGGGACATTCTGAAGACAGAGGTGACATAGGCTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FWKAEDSSGRRPSAY*SRGHSEDRGDIGFG Trigger: TCCAAAGCCTATGTCACCTCTGTCTTCAGAATGTCCCCTGCTGCAGTAAGCGGAAGGTCTTCTTCCACTGGAGTCTTCAGCCTTCCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053376.12 ENSMUST00000143162.8 |
||
| CDS-3UTR CAA 90 bp | CTATTCACTGAGGAGGGACCCACTGGTTCCCAGCCTAACTCTGAAGCTGAAGTTCTCGTCACTCTTCCCTaGAACGTGTCCAATCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LFTEEGPTGSQPNSEAEVLVTLP*NVSNHS Trigger: ACTGTGATTGGACACGTTCAAGGGAAGAGTGACGAG...AACTTCAGCTTCAGAGTTAGGCTGGGAACCAGTGGGTCCCTCCTCAGTGAATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053376.12 |
||
| CDS TCA 90 bp | AGACCATGCGAGTGCCTACATAATGCAGTCTTTGTGTTCCCATCTTaGACGTGTCCAATCACAGTAGCTGCTATCTCCTTGTGGTTCGGG | + |
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Preference number: 5 (lower is better) Translates to: RPCECLHNAVFVFPS*TCPITVAAISLWFG Trigger: CCCGAACCACAAGGAGATAGCAGCTACTGTGATTGGACACGTTCAAGATGGGAACACAAAGACTGCATTATGTAGGCACTCGCATGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127032.8 |
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| CDS-3UTR CAA 90 bp | GGAGGGTCTCGTCACTCTTCCCTGGACCAGAATGACATAGGCCTTGATCATGCTTACATAATGCAGTCTTaGTGTTCCCATCTTCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: GGSRHSSLDQNDIGLDHAYIMQS*CSHLLQ Trigger: CTGGAGAAGATGGGAACACAAAGACTGCATTATGTA...AGCATGATCAAGGCCTATGTCATTCTGGTCCAGGGAAGAGTGACGAGACCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128194.8 |
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| CDS TCA 90 bp | TTTCTTGATCTTGTTGTCACCAGTATAAAATCAAATGTCAGCACATaGGCTGCTGCCGGGAGACCATGCGAGTGCCTACATAATGCAGTC | + |
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Preference number: 5 (lower is better) Translates to: FLDLVVTSIKSNVST*AAAGRPCECLHNAV Trigger: GACTGCATTATGTAGGCACTCGCATGGTCTCCCGGCAGCAGCTCATGTGCTGACATTTGATTTTATACTGGTGACAACAAGATCAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127032.8 |
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| CDS-3UTR CAA 90 bp | TCATCCACGTGGCCATTTCATCGAGTATCTCTGAGACTGAGACTAAAGAGGCATACTCTGAGCTCTTTCTaGATCTTGTTGTCACCAGTA | + |
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Preference number: 5 (lower is better) Translates to: SSTWPFHRVSLRLRLKRHTLSSF*ILLSPV Trigger: TACTGGTGACAACAAGATCAAGAAAGAGCTCAGAGT...ATGCCTCTTTAGTCTCAGTCTCAGAGATACTCGATGAAATGGCCACGTGGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127032.8 |
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| CDS-3UTR CAA 90 bp | CGCCTGAGTGAGCGTGCCATTTTTATAGTCACTGTAGAGATGGTATCTATACCCCTCTCTGTTGTAAATTaGCAAACTCTGAGCTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: RLSERAIFIVTVEMVSIPLSVVN*QTLSSF Trigger: GAAAGAGCTCAGAGTTTGCAAATTTACAACAGAGAG...GGGTATAGATACCATCTCTACAGTGACTATAAAAATGGCACGCTCACTCAGGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127032.8 |
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| CDS-3UTR CAA 90 bp | CTGAGACTGAGACTAAAGAGGCATCAATTAAAGCTCCAAAATTATTACCTCCATTACATAATGCAGTCTTaGTGTTCCCATCTTGAACGT | + |
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Preference number: 5 (lower is better) Translates to: LRLRLKRHQLKLQNYYLHYIMQS*CSHLER Trigger: ACGTTCAAGATGGGAACACAAAGACTGCATTATGTA...ATGGAGGTAATAATTTTGGAGCTTTAATTGATGCCTCTTTAGTCTCAGTCTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127032.8 |
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| CDS CCA 72 bp | GTCTCGTCACTCTTCCCTGGCTGCCAAGCCTCCGAGTaGCCTTCTCGGGATCCCCTAAATTATTCATCCCTC | + |
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Preference number: 6 (lower is better) Translates to: VSSLFPGCQASE*PSRDPLNYSSL Trigger: GAGGGATGAATAATTTAGGGGATCCCGAGAAGGCCACTCGGAGGCTTGGCAGCCAGGGAAGAGTGACGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143162.8 |
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| CDS CCA 72 bp | GGTGACATAGGCTTTGGAGATGGAGAAAGCTTGGTGTaGGGAGGGTCTCGTCACTCTTCCCTGGCTGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: GDIGFGDGESLV*GGSRHSSLAAK Trigger: CTTGGCAGCCAGGGAAGAGTGACGAGACCCTCCCCACACCAAGCTTTCTCCATCTCCAAAGCCTATGTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143162.8 |
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| CDS CCA 72 bp | GGTGACATAGGCTTTGGAGATGGAGAAAGCTTGGTGTaGGGAGGGTCTCGTCACTCTTCCCTTGAACGTGTC | + |
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Preference number: 6 (lower is better) Translates to: GDIGFGDGESLV*GGSRHSSLERV Trigger: GACACGTTCAAGGGAAGAGTGACGAGACCCTCCCCACACCAAGCTTTCTCCATCTCCAAAGCCTATGTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053376.12 |
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| CDS CAA 90 bp | GAGATGGAGAAAGCTTGGTGTGGGGAGGGTCTCGTCACTCTTCCCTaGAACGTGTCCAATCACAGTAGCTGCTATCTCCTTGTGGTTCGG | + |
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Preference number: 6 (lower is better) Translates to: EMEKAWCGEGLVTLP*NVSNHSSCYLLVVR Trigger: CCGAACCACAAGGAGATAGCAGCTACTGTGATTGGACACGTTCAAGGGAAGAGTGACGAGACCCTCCCCACACCAAGCTTTCTCCATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053376.12 |
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| CDS TCA 72 bp | TCCAGCCCTCGGGAGGCAGAGGATGAAGGGTTTCCATaGGCCAGCTTTTTCTACCTTGAACGTGTCCAATCA | + |
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Preference number: 6 (lower is better) Translates to: SSPREAEDEGFP*ASFFYLERVQS Trigger: TGATTGGACACGTTCAAGGTAGAAAAAGCTGGCTCATGGAAACCCTTCATCCTCTGCCTCCCGAGGGCTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130033.8 |
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| CDS CCA 72 bp | GCTGTGATGAGTCACGTCGAAGCCTTCCCTGGAGCATaGTATCACTTGAACGTGTCCAATCACAGTAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: AVMSHVEAFPGA*YHLNVSNHSSC Trigger: GCAGCTACTGTGATTGGACACGTTCAAGTGATACCATGCTCCAGGGAAGGCTTCGACGTGACTCATCACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000143162.8 ENSMUST00000148430.2 ENSMUST00000232858.2 |
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| CDS CAA 72 bp | CCGGGAGACCATGCGAGTGCCTACATAATGCAGTCTTaGTGTTCCCATCTTCTCCAGACCTTGAACGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: PGDHASAYIMQS*CSHLLQTLNVS Trigger: GGACACGTTCAAGGTCTGGAGAAGATGGGAACACAAAGACTGCATTATGTAGGCACTCGCATGGTCTCCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128194.8 |
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| CDS CAA 90 bp | GAGCTGCTGCCGGGAGACCATGCGAGTGCCTACATAATGCAGTCTTaGTGTTCCCATCTTCTCCAGACCTTGAACGTGTCCAATCACAGT | + |
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Preference number: 6 (lower is better) Translates to: ELLPGDHASAYIMQS*CSHLLQTLNVSNHS Trigger: ACTGTGATTGGACACGTTCAAGGTCTGGAGAAGATGGGAACACAAAGACTGCATTATGTAGGCACTCGCATGGTCTCCCGGCAGCAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128194.8 |
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| CDS CAA 90 bp | GGGAGGCAGAGGATGAAGGGTTTCCATGAGCCAGCTTTTTCTACCTaGAACGTGTCCAATCACAGTAGCTGCTATCTCCTTGTGGTTCGG | + |
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Preference number: 6 (lower is better) Translates to: GRQRMKGFHEPAFST*NVSNHSSCYLLVVR Trigger: CCGAACCACAAGGAGATAGCAGCTACTGTGATTGGACACGTTCAAGGTAGAAAAAGCTGGCTCATGGAAACCCTTCATCCTCTGCCTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130033.8 |
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| CDS TCA 72 bp | CTTGTTGTCACCAGTATAAAATCAAATGTCAGCACATaGGCTGCTGCCGGGAGACCATGCGAGTGCCTACAT | + |
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Preference number: 6 (lower is better) Translates to: LVVTSIKSNVST*AAAGRPCECLH Trigger: ATGTAGGCACTCGCATGGTCTCCCGGCAGCAGCTCATGTGCTGACATTTGATTTTATACTGGTGACAACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127032.8 |
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| CDS CAA 90 bp | AGTGCCTACATAATGCAGTCTTTGTGTTCCCATCTTCTCCAGACCTaGAACGTGTCCAATCACAGTAGCTGCTATCTCCTTGTGGTTCGG | + |
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Preference number: 6 (lower is better) Translates to: SAYIMQSLCSHLLQT*NVSNHSSCYLLVVR Trigger: CCGAACCACAAGGAGATAGCAGCTACTGTGATTGGACACGTTCAAGGTCTGGAGAAGATGGGAACACAAAGACTGCATTATGTAGGCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128194.8 |
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| CDS TCA 72 bp | GAGTGCCTACATAATGCAGTCTTTGTGTTCCCATCTTaGACGTGTCCAATCACAGTAGCTGCTATCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: ECLHNAVFVFPS*TCPITVAAISL Trigger: CAAGGAGATAGCAGCTACTGTGATTGGACACGTTCAAGATGGGAACACAAAGACTGCATTATGTAGGCACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127032.8 |
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| CDS CAA 72 bp | ATAATGCAGTCTTTGTGTTCCCATCTTCTCCAGACCTaGAACGTGTCCAATCACAGTAGCTGCTATCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: IMQSLCSHLLQT*NVSNHSSCYLL Trigger: AAGGAGATAGCAGCTACTGTGATTGGACACGTTCAAGGTCTGGAGAAGATGGGAACACAAAGACTGCATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128194.8 |
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