Pregenerated sensors for TCTE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023949Ensembl transcript IDs: ENSMUST00000113547.2, ENSMUST00000233588.2
Found 245 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GGCTGCCCCCGACAGGCACACACACAGTCACTCCCAAGCCCCCTCTaGTGCTCTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGT | + |
Preference number: 1 (lower is better) Translates to: GCPRQAHTQSLPSPL*CSTQRLLLAKSPWS Trigger: ACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAGAGCACCAGAGGGGGCTTGGGAGTGACTGTGTGTGTGCCTGTCGGGGGCAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR TCA 90 bp | CTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCTTTaGGGTAGACGGGCACTGGGTCACTCAGCCCGAGGAGAGTTGGGA | + |
Preference number: 1 (lower is better) Translates to: LECRPSWIAAAVAHL*GRRALGHSARGELG Trigger: TCCCAACTCTCCTCGGGCTGAGTGACCCAGTGCCCGTCTACCTCAAAGATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR GCA 90 bp | TGCCCCCGACAGGCACACACACAGTCACTCCCAAGCCCCCTCTGGTaGTCTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCA | + |
Preference number: 1 (lower is better) Translates to: CPRQAHTQSLPSPLW*STQRLLLAKSPWSA Trigger: TGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAGAGCACCAGAGGGGGCTTGGGAGTGACTGTGTGTGTGCCTGTCGGGGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR CCA 90 bp | GGAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTaGGGTGGGCTAGGCCTGGCTCGGGAGAAGACAGGCCTCTGTCAA | + |
Preference number: 1 (lower is better) Translates to: GEGTWKTVCPEDKGL*GGLGLAREKTGLCQ Trigger: TTGACAGAGGCCTGTCTTCTCCCGAGCCAGGCCTAGCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR CCA 90 bp | CCCCTCTGGTGCTCTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTaGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCTTT | + |
Preference number: 1 (lower is better) Translates to: PLWCSTQRLLLAKSP*SAGPLGLQLQSPIF Trigger: AAAGATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAGAGCACCAGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR GCA 90 bp | TCTGTGATTCCTATGGGTGTGGCCCCATGGTGGGCAGTCACAGCGTaGCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTG | + |
Preference number: 1 (lower is better) Translates to: SVIPMGVAPWWAVTA*QGLKERVPGRLYVL Trigger: CAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCCCACCATGGGGCCACACCCATAGGAATCACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR CCA 90 bp | GGGTGGGCTAGGCCTGGCTCGGGAGAAGACAGGCCTCTGTCAAATTaGGTGCATCACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGC | + |
Preference number: 1 (lower is better) Translates to: GWARPGSGEDRPLSN*VHHTVAFLSWNSKR Trigger: GCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTGATGCACCCAATTTGACAGAGGCCTGTCTTCTCCCGAGCCAGGCCTAGCCCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR CCA 90 bp | ATGGTGGGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTaGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCTA | + |
Preference number: 1 (lower is better) Translates to: MVGSHSVPGTQGEGT*KTVCPEDKGLWGGL Trigger: TAGCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCCCACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR GCA 90 bp | GGGCTAGGCCTGGCTCGGGAGAAGACAGGCCTCTGTCAAATTGGGTaGATCACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAG | + |
Preference number: 1 (lower is better) Translates to: GLGLAREKTGLCQIG*ITLWPFCHGIPSAK Trigger: CTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTGATGCACCCAATTTGACAGAGGCCTGTCTTCTCCCGAGCCAGGCCTAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR TCA 90 bp | GGGCACTGGGTCACTCAGCCCGAGGAGAGTTGGGAGATAAGAGTTTaGATTAGTCAGCCAAGATCCTCTCATGAATCCATAGTCTGTGAT | + |
Preference number: 1 (lower is better) Translates to: GHWVTQPEESWEIRV*ISQPRSSHESIVCD Trigger: ATCACAGACTATGGATTCATGAGAGGATCTTGGCTGACTAATTCAAACTCTTATCTCCCAACTCTCCTCGGGCTGAGTGACCCAGTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR CCA 90 bp | GCTCGGGAGAAGACAGGCCTCTGTCAAATTGGGTGCATCACACTGTaGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATC | + |
Preference number: 1 (lower is better) Translates to: AREKTGLCQIGCITL*PFCHGIPSAKIVQI Trigger: GATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTGATGCACCCAATTTGACAGAGGCCTGTCTTCTCCCGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR TCA 90 bp | TGTGCTCATGCATGTGTGTGTATGTGTGTGTGTGTGTGTGTAGACTaGGGTCAGGGCTCAGCTATCTGCTTAGTAAAAAGGGAAAGGGGT | + |
Preference number: 1 (lower is better) Translates to: CAHACVCMCVCVCVD*GQGSAICLVKRERG Trigger: ACCCCTTTCCCTTTTTACTAAGCAGATAGCTGAGCCCTGACCTCAGTCTACACACACACACACACACATACACACACATGCATGAGCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR GCA 90 bp | GGTGCTCATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTaGCTTCCCTGTTCCTGTTATGGGTCTAGTAATGGCCATTTTCTA | + |
Preference number: 1 (lower is better) Translates to: GAHEEFEQGWSFRVL*LPCSCYGSSNGHFL Trigger: TAGAAAATGGCCATTACTAGACCCATAACAGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCATGAGCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR CCA 90 bp | GGAGCTAGTGCACACATTTCATCCTTAGGTGCCCCTTCTGTACCTTaGCATCTTCATATATACAAATCTGGCTGCTCATTCCAAGGAGAT | + |
Preference number: 1 (lower is better) Translates to: GASAHISSLGAPSVP*HLHIYKSGCSFQGD Trigger: ATCTCCTTGGAATGAGCAGCCAGATTTGTATATATGAAGATGCCAAGGTACAGAAGGGGCACCTAAGGATGAAATGTGTGCACTAGCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR TCA 90 bp | CATCTTCATATATACAAATCTGGCTGCTCATTCCAAGGAGATTCGTaGTCCCTTCTTCTCGATACCTCAGAACCAGGGGCAGACATATCA | + |
Preference number: 1 (lower is better) Translates to: HLHIYKSGCSFQGDS*SLLLDTSEPGADIS Trigger: TGATATGTCTGCCCCTGGTTCTGAGGTATCGAGAAGAAGGGATCACGAATCTCCTTGGAATGAGCAGCCAGATTTGTATATATGAAGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR TCA 90 bp | CTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACACTaGTGGATAATAAAAGTGTGGATGACTCACTGGTCTGCTCCCTCA | + |
Preference number: 1 (lower is better) Translates to: LSVMEFQAQRLYKSH*WIIKVWMTHWSAPS Trigger: TGAGGGAGCAGACCAGTGAGTCATCCACACTTTTATTATCCATCAGTGTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR CCA 90 bp | TTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCAGGTGTGGCCCCATGGTaGGCAGTCACAGCGTGCCAG | + |
Preference number: 2 (lower is better) Translates to: LQRVPGVQALLDCSCSRPGVAPW*AVTACQ Trigger: CTGGCACGCTGTGACTGCCCACCATGGGGCCACACC...TGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR CAA 90 bp | CGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATaGCAGCTGCAGTCGCCCATCTTTGAGGTAGACGGGCACTGGGTC | + |
Preference number: 2 (lower is better) Translates to: RLLLAKSPWSAGPLG*QLQSPIFEVDGHWV Trigger: GACCCAGTGCCCGTCTACCTCAAAGATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR GCA 90 bp | TTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATGGGCAGTCACAGCGTaGCAGGGACTCAAGGAGAGG | + |
Preference number: 2 (lower is better) Translates to: LQRVPGVQALLDCSCSRPWAVTA*QGLKER Trigger: CCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCCCA...TGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR CCA 90 bp | CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATGAGGTAGACGGGCACTaGGTCACTCAGCCCGAGGAG | + |
Preference number: 2 (lower is better) Translates to: LLSACFLQRVPGVQALLDEVDGH*VTQPEE Trigger: CTCCTCGGGCTGAGTGACCCAGTGCCCGTCTACCTC...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR CAA 90 bp | CAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTaGTGGGGTGGGCTAGGCCTGGCTCGGGAGAAGACAGGCCTCTGT | + |
Preference number: 2 (lower is better) Translates to: QGEGTWKTVCPEDKG*WGGLGLAREKTGLC Trigger: ACAGAGGCCTGTCTTCTCCCGAGCCAGGCCTAGCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR CCA 90 bp | GGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTAGGCCTCTGTCAAATTaGGTGCATCACACTGTGGCC | + |
Preference number: 2 (lower is better) Translates to: GSHSVPGTQGEGTWKTVCRPLSN*VHHTVA Trigger: GGCCACAGTGTGATGCACCCAATTTGACAGAGGCCT...ACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR GCA 90 bp | GGGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGCATTTCATCCTTAGGTaGCCCTTCTGTACCTTGGCA | + |
Preference number: 2 (lower is better) Translates to: GQSQRARDSRRGYLEDCMHFILR*PFCTLA Trigger: TGCCAAGGTACAGAAGGGGCACCTAAGGATGAAATG...CATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR TCA 90 bp | GAACCTCTGCTAGCAGCTGTGGCTACACACACACACACACACACACACACACACATCAAGGGTGTGAAATaGAGGTGTGGTTGCCGGGGT | + |
Preference number: 2 (lower is better) Translates to: EPLLAAVATHTHTHTHTHIKGVK*RCGCRG Trigger: ACCCCGGCAACCACACCTTCATTTCACACCCTTGAT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCCACAGCTGCTAGCAGAGGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR TCA 90 bp | ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGGTCTGCTCCCTCAGTaGCACTTGTTCCCCATCCTT | + |
Preference number: 2 (lower is better) Translates to: THTHTPSHLHVCTLELSEGLLPQ*HLFPIL Trigger: AAGGATGGGGAACAAGTGTCACTGAGGGAGCAGACC...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR GCA 90 bp | GCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCTCTTTTAGAGTCCTTTaGCTTCCCTGTTCCTGTTAT | + |
Preference number: 2 (lower is better) Translates to: AKSPWSAGPLGLQLQSPISFRVL*LPCSCY Trigger: ATAACAGGAACAGGGAAGGCAAAGGACTCTAAAAGA...GATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR GCA 90 bp | GTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGATGACTCACTGGTCTaGTCCCTCAGTGACACTTGT | + |
Preference number: 2 (lower is better) Translates to: VPGTQGEGTWKTVCPEDKDDSLV*SLSDTC Trigger: ACAAGTGTCACTGAGGGAGCAGACCAGTGAGTCATC...CTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR CCA 90 bp | GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCGAGTTTGAGCAGGGATaGTCTTTTAGAGTCCTTTGC | + |
Preference number: 2 (lower is better) Translates to: ERVPGRLYVLRIRACGVGEFEQG*SFRVLC Trigger: GCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTC...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR CCA 90 bp | CACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGGAGTTTGAGCAGGGATaGTCTTTTAGAGTCCTTTGC | + |
Preference number: 2 (lower is better) Translates to: HSVPGTQGEGTWKTVCPEEFEQG*SFRVLC Trigger: GCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTC...CTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR GCA 90 bp | GAACCTCTGCTAGCAGCTGTGGCTACACACACACACACACACACACACACACACCATTTCATCCTTAGGTaGCCCTTCTGTACCTTGGCA | + |
Preference number: 2 (lower is better) Translates to: EPLLAAVATHTHTHTHTHHFILR*PFCTLA Trigger: TGCCAAGGTACAGAAGGGGCACCTAAGGATGAAATG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCCACAGCTGCTAGCAGAGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR GCA 90 bp | TTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCTTTTAGAGTCCTTTaGCTTCCCTGTTCCTGTTAT | + |
Preference number: 2 (lower is better) Translates to: LQRVPGVQALLDCSCSRPSFRVL*LPCSCY Trigger: ATAACAGGAACAGGGAAGGCAAAGGACTCTAAAAGA...TGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR CCA 90 bp | GTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGGTGCATCACACTGTaGCCTTTCTGTCATGGAATT | + |
Preference number: 2 (lower is better) Translates to: VPGTQGEGTWKTVCPEDKGCITL*PFCHGI Trigger: AATTCCATGACAGAAAGGCCACAGTGTGATGCACCC...CTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR CCA 90 bp | CACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGGCCCCTTCTGTACCTTaGCATCTTCATATATACAAA | + |
Preference number: 2 (lower is better) Translates to: HSVPGTQGEGTWKTVCPEAPSVP*HLHIYK Trigger: TTTGTATATATGAAGATGCCAAGGTACAGAAGGGGC...CTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR CCA 90 bp | TTTACACTGAATGTTCTTGTTTCTCTAATTAGAACCTCTGCTAGCAGCTGTGGCCATCTCCAGGGAGGGTaGGAGGGTGAGGGAGACAGG | + |
Preference number: 2 (lower is better) Translates to: FTLNVLVSLIRTSASSCGHLQGG*EGEGDR Trigger: CCTGTCTCCCTCACCCTCCCACCCTCCCTGGAGATG...GCCACAGCTGCTAGCAGAGGTTCTAATTAGAGAAACAAGAACATTCAGTGTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR TCA 90 bp | ATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTATCAAGGGTGTGAAATaGAGGTGTGGTTGCCGGGGT | + |
Preference number: 2 (lower is better) Translates to: MKSLSRDGLLESFAFPVPIKGVK*RCGCRG Trigger: ACCCCGGCAACCACACCTTCATTTCACACCCTTGAT...AGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR TCA 90 bp | ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGACATATCAAGGGTGTaGAATGAAGGTGTGGTTGCC | + |
Preference number: 2 (lower is better) Translates to: THTHTPSHLHVCTLELSEDISRV*NEGVVA Trigger: GGCAACCACACCTTCATTTCACACCCTTGATATGTC...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR GCA 90 bp | ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGCTCTGTCAAATTGGGTaGATCACACTGTGGCCTTTC | + |
Preference number: 2 (lower is better) Translates to: THTHTPSHLHVCTLELSELCQIG*ITLWPF Trigger: GAAAGGCCACAGTGTGATGCACCCAATTTGACAGAG...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR GCA 90 bp | TTTACACTGAATGTTCTTGTTTCTCTAATTAGAACCTCTGCTAGCAGCTGTGGCCAGAGGACTCTAGGCTaGCCCCGACAGGCACACACA | + |
Preference number: 2 (lower is better) Translates to: FTLNVLVSLIRTSASSCGQRTLG*PRQAHT Trigger: TGTGTGTGCCTGTCGGGGGCAGCCTAGAGTCCTCTG...GCCACAGCTGCTAGCAGAGGTTCTAATTAGAGAAACAAGAACATTCAGTGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR CCA 90 bp | TTTACACTGAATGTTCTTGTTTCTCTAATTAGAACCTCTGCTAGCAGCTGTGGCAGGCCTCTGTCAAATTaGGTGCATCACACTGTGGCC | + |
Preference number: 2 (lower is better) Translates to: FTLNVLVSLIRTSASSCGRPLSN*VHHTVA Trigger: GGCCACAGTGTGATGCACCCAATTTGACAGAGGCCT...GCCACAGCTGCTAGCAGAGGTTCTAATTAGAGAAACAAGAACATTCAGTGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR CCA 90 bp | GTGTGTGTGTGTAGACTGAGGTCAGGGCTCAGCTATCTGCTTAGTAAAAAGGGAGCCCCTTCTGTACCTTaGCATCTTCATATATACAAA | + |
Preference number: 2 (lower is better) Translates to: VCVCRLRSGLSYLLSKKGAPSVP*HLHIYK Trigger: TTTGTATATATGAAGATGCCAAGGTACAGAAGGGGC...TCCCTTTTTACTAAGCAGATAGCTGAGCCCTGACCTCAGTCTACACACACACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR TCA 90 bp | TTTACACTGAATGTTCTTGTTTCTCTAATTAGAACCTCTGCTAGCAGCTGTGGCGACATATCAAGGGTGTaGAATGAAGGTGTGGTTGCC | + |
Preference number: 2 (lower is better) Translates to: FTLNVLVSLIRTSASSCGDISRV*NEGVVA Trigger: GGCAACCACACCTTCATTTCACACCCTTGATATGTC...GCCACAGCTGCTAGCAGAGGTTCTAATTAGAGAAACAAGAACATTCAGTGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR CAA 90 bp | TTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCACAGGCCTCTGTCAAATaGGGTGCATCACACTGTGGC | + |
Preference number: 3 (lower is better) Translates to: LQRVPGVQALLDCSCSRPQASVK*GASHCG Trigger: GCCACAGTGTGATGCACCCAATTTGACAGAGGCCTG...TGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR CAA 90 bp | CACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGGTGTCAGGCCTGAGGATAAGGGCTaGTGGGGTGGGCTAGGCCTG | + |
Preference number: 3 (lower is better) Translates to: HTPSHLHVCTLELSEGVRPEDKG*WGGLGL Trigger: CAGGCCTAGCCCACCCCACAAGCCCTTATCCTCAGG...CCTGACACCCTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR GCA 72 bp | TACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTaGAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCAT | + |
Preference number: 3 (lower is better) Translates to: YSAPASCKESLE*RPSWIAAAVAH Trigger: ATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR CCA 72 bp | CAGCTGCAGTCGCCCATCTTTGAGGTAGACGGGCACTaGGTCACTCAGCCCGAGGAGAGTTGGGAGATAAGA | + |
Preference number: 3 (lower is better) Translates to: QLQSPIFEVDGH*VTQPEESWEIR Trigger: TCTTATCTCCCAACTCTCCTCGGGCTGAGTGACCCAGTGCCCGTCTACCTCAAAGATGGGCGACTGCAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
||
3UTR CCA 72 bp | TGCTCTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTaGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCG | + |
Preference number: 3 (lower is better) Translates to: CSTQRLLLAKSP*SAGPLGLQLQS Trigger: CGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
||
3UTR CCA 72 bp | AGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTaGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGG | + |
Preference number: 3 (lower is better) Translates to: SHSVPGTQGEGT*KTVCPEDKGLW Trigger: CCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR CCA 72 bp | AGGCCTGGCTCGGGAGAAGACAGGCCTCTGTCAAATTaGGTGCATCACACTGTGGCCTTTCTGTCATGGAAT | + |
Preference number: 3 (lower is better) Translates to: RPGSGEDRPLSN*VHHTVAFLSWN Trigger: ATTCCATGACAGAAAGGCCACAGTGTGATGCACCCAATTTGACAGAGGCCTGTCTTCTCCCGAGCCAGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR CAA 90 bp | ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGCTCAGCGCCTGCTTCTaGCAAAGAGTCCCTGGAGTG | + |
Preference number: 3 (lower is better) Translates to: THTHTPSHLHVCTLELSELSACF*QRVPGV Trigger: CACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAG...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR TCA 72 bp | CTCAGAACCAGGGGCAGACATATCAAGGGTGTGAAATaGAGGTGTGGTTGCCGGGGTAACCCATCAGATCAC | + |
Preference number: 3 (lower is better) Translates to: LRTRGRHIKGVK*RCGCRGNPSDH Trigger: GTGATCTGATGGGTTACCCCGGCAACCACACCTTCATTTCACACCCTTGATATGTCTGCCCCTGGTTCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
||
3UTR GCA 72 bp | CTGGCTCGGGAGAAGACAGGCCTCTGTCAAATTGGGTaGATCACACTGTGGCCTTTCTGTCATGGAATTCCA | + |
Preference number: 3 (lower is better) Translates to: LAREKTGLCQIG*ITLWPFCHGIP Trigger: TGGAATTCCATGACAGAAAGGCCACAGTGTGATGCACCCAATTTGACAGAGGCCTGTCTTCTCCCGAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR CAA 90 bp | GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCGTGCTCATGAAGAGTTaGAGCAGGGATGGTCTTTTA | + |
Preference number: 3 (lower is better) Translates to: ERVPGRLYVLRIRACGVGVLMKS*SRDGLL Trigger: TAAAAGACCATCCCTGCTCAAACTCTTCATGAGCAC...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
||
3UTR-3UTR CAA 90 bp | ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGCAGGCCTCTGTCAAATaGGGTGCATCACACTGTGGC | + |
Preference number: 3 (lower is better) Translates to: THTHTPSHLHVCTLELSEQASVK*GASHCG Trigger: GCCACAGTGTGATGCACCCAATTTGACAGAGGCCTG...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR CCA 72 bp | GAGGTAGATGGTGCTCATGAAGAGTTTGAGCAGGGATaGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTGT | + |
Preference number: 3 (lower is better) Translates to: EVDGAHEEFEQG*SFRVLCLPCSC Trigger: ACAGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCATGAGCACCATCTACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR-3UTR CAA 90 bp | ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGTGCTCATGAAGAGTTaGAGCAGGGATGGTCTTTTA | + |
Preference number: 3 (lower is better) Translates to: THTHTPSHLHVCTLELSEVLMKS*SRDGLL Trigger: TAAAAGACCATCCCTGCTCAAACTCTTCATGAGCAC...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR GCA 72 bp | GAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTaGCTTCCCTGTTCCTGTTATGGGTCTAGTAATGGC | + |
Preference number: 3 (lower is better) Translates to: EEFEQGWSFRVL*LPCSCYGSSNG Trigger: GCCATTACTAGACCCATAACAGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
||
3UTR CCA 72 bp | AAGACAGGCCTCTGTCAAATTGGGTGCATCACACTGTaGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATT | + |
Preference number: 3 (lower is better) Translates to: KTGLCQIGCITL*PFCHGIPSAKI Trigger: AATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTGATGCACCCAATTTGACAGAGGCCTGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
||
3UTR TCA 72 bp | GTCACTCAGCCCGAGGAGAGTTGGGAGATAAGAGTTTaGATTAGTCAGCCAAGATCCTCTCATGAATCCATA | + |
Preference number: 3 (lower is better) Translates to: VTQPEESWEIRV*ISQPRSSHESI Trigger: TATGGATTCATGAGAGGATCTTGGCTGACTAATTCAAACTCTTATCTCCCAACTCTCCTCGGGCTGAGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR CCA 72 bp | CCCTTCTGTACCTTGGCATCTTCATATATACAAATCTaGCTGCTCATTCCAAGGAGATTCGTGATCCCTTCT | + |
Preference number: 3 (lower is better) Translates to: PFCTLASSYIQI*LLIPRRFVIPS Trigger: AGAAGGGATCACGAATCTCCTTGGAATGAGCAGCCAGATTTGTATATATGAAGATGCCAAGGTACAGAAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR CCA 72 bp | GCACACATTTCATCCTTAGGTGCCCCTTCTGTACCTTaGCATCTTCATATATACAAATCTGGCTGCTCATTC | + |
Preference number: 3 (lower is better) Translates to: AHISSLGAPSVP*HLHIYKSGCSF Trigger: GAATGAGCAGCCAGATTTGTATATATGAAGATGCCAAGGTACAGAAGGGGCACCTAAGGATGAAATGTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR CCA 72 bp | TCAAATTGGGTGCATCACACTGTGGCCTTTCTGTCATaGAATTCCAAGCGCAAAGATTGTACAAATCACACT | + |
Preference number: 3 (lower is better) Translates to: SNWVHHTVAFLS*NSKRKDCTNHT Trigger: AGTGTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTGATGCACCCAATTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | GCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCGTCCTGTGCTGGAGCTaGCCAAGGCAGAGACCTGGC | + |
Preference number: 4 (lower is better) Translates to: AKSPWSAGPLGLQLQSPIVLCWS*PRQRPG Trigger: GCCAGGTCTCTGCCTTGGGCAGCTCCAGCACAGGAC...GATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | GCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCGGCGCACGTAGTTCCTaGAGAGGGGCAGCAGGTCCA | + |
Preference number: 4 (lower is better) Translates to: AKSPWSAGPLGLQLQSPIGARSS*RGAAGP Trigger: TGGACCTGCTGCCCCTCTGCAGGAACTACGTGCGCC...GATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR TCA 90 bp | GGGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGACACGGACCAGCGCTTaGTGCAGCAGCGGTGCCAGT | + |
Preference number: 4 (lower is better) Translates to: GQSQRARDSRRGYLEDCMTRTSA*CSSGAS Trigger: ACTGGCACCGCTGCTGCATCAAGCGCTGGTCCGTGT...CATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | CACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGTTCCAGCTGCCGCCGTaGCTGGACACGTGGCACACG | + |
Preference number: 4 (lower is better) Translates to: HSVPGTQGEGTWKTVCPEFQLPP*LDTWHT Trigger: CGTGTGCCACGTGTCCAGGCACGGCGGCAGCTGGAA...CTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | TGTGATTCCTATGGGTGTGGCCCCATGGTGGGCAGTCACAGCGTGCCAGGGACTACGTGGGTCCTGTGCTaGAGCTGCCCAAGGCAGAGA | + |
Preference number: 4 (lower is better) Translates to: CDSYGCGPMVGSHSVPGTTWVLC*SCPRQR Trigger: TCTCTGCCTTGGGCAGCTCCAGCACAGGACCCACGT...AGTCCCTGGCACGCTGTGACTGCCCACCATGGGGCCACACCCATAGGAATCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | GCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCTCCTCCAGGGCTGGGTaGTCCAGCAGGCTACGGATT | + |
Preference number: 4 (lower is better) Translates to: AKSPWSAGPLGLQLQSPISSRAG*SSRLRI Trigger: AATCCGTAGCCTGCTGGACCACCCAGCCCTGGAGGA...GATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | TTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCACGGAGAGGCACTTGTTaGTCTCCAGGGCGTGGGCGA | + |
Preference number: 4 (lower is better) Translates to: LQRVPGVQALLDCSCSRPRRGTC*SPGRGR Trigger: TCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCG...TGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR TCA 90 bp | GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCACACGGACCAGCGCTTaGTGCAGCAGCGGTGCCAGT | + |
Preference number: 4 (lower is better) Translates to: ERVPGRLYVLRIRACGVGTRTSA*CSSGAS Trigger: ACTGGCACCGCTGCTGCATCAAGCGCTGGTCCGTGT...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR TCA 90 bp | GCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCGGGTGTGGCAAGCTTTaGTGGTGGCTGCCAGAGAGT | + |
Preference number: 4 (lower is better) Translates to: AKSPWSAGPLGLQLQSPIGCGKL*WWLPES Trigger: ACTCTCTGGCAGCCACCATCAAAGCTTGCCACACCC...GATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATAGGACGTGGGTCCTGTaGTGGAGCTGCCCAAGGCAG | + |
Preference number: 4 (lower is better) Translates to: LLSACFLQRVPGVQALLDRTWVL*WSCPRQ Trigger: CTGCCTTGGGCAGCTCCAGCACAGGACCCACGTCCT...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCCAGCAGCTTAGCCGCTaGTCGTGCACCACGGTCTCC | + |
Preference number: 4 (lower is better) Translates to: ERVPGRLYVLRIRACGVGQQLSR*SCTTVS Trigger: GGAGACCGTGGTGCACGAGCAGCGGCTAAGCTGCTG...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | TGTGATTCCTATGGGTGTGGCCCCATGGTGGGCAGTCACAGCGTGCCAGGGACTGCTCAGACAGCTTGTTaGCACCAAGGTGCAGCACGG | + |
Preference number: 4 (lower is better) Translates to: CDSYGCGPMVGSHSVPGTAQTAC*HQGAAR Trigger: CCGTGCTGCACCTTGGTGGCAACAAGCTGTCTGAGC...AGTCCCTGGCACGCTGTGACTGCCCACCATGGGGCCACACCCATAGGAATCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCGTAGTGGTCCTTCTCTaGCTCGCTCCCCTCGCCCTC | + |
Preference number: 4 (lower is better) Translates to: ERVPGRLYVLRIRACGVGVVVLL*LAPLAL Trigger: GAGGGCGAGGGGAGCGAGCCAGAGAAGGACCACTAC...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATGTAGTGGTCCTTCTCTaGCTCGCTCCCCTCGCCCTC | + |
Preference number: 4 (lower is better) Translates to: LLSACFLQRVPGVQALLDVVVLL*LAPLAL Trigger: GAGGGCGAGGGGAGCGAGCCAGAGAAGGACCACTAC...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | GGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCGGAGAGGCACTTGTTaGTCTCCAGGGCGTGGGCGA | + |
Preference number: 4 (lower is better) Translates to: GSHSVPGTQGEGTWKTVCRRGTC*SPGRGR Trigger: TCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCG...ACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR TCA 90 bp | TTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCAAGGTACGATGGCCAGTaGCCACTCTGCATCCTCGGA | + |
Preference number: 4 (lower is better) Translates to: LQRVPGVQALLDCSCSRPRYDGQ*PLCILG Trigger: TCCGAGGATGCAGAGTGGTCACTGGCCATCGTACCT...TGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR TCA 90 bp | GCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCCACCACGGTCTCCGATaGGGTTGTGGGATAAGTCCA | + |
Preference number: 4 (lower is better) Translates to: AKSPWSAGPLGLQLQSPIHHGLR*GCGISP Trigger: TGGACTTATCCCACAACCTCATCGGAGACCGTGGTG...GATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR TCA 90 bp | CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATCCAGGCGCCTGCAGTTaGTTGTTGGCCAGGTTGAGC | + |
Preference number: 4 (lower is better) Translates to: LLSACFLQRVPGVQALLDPGACS*LLARLS Trigger: GCTCAACCTGGCCAACAATCAACTGCAGGCGCCTGG...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR TCA 90 bp | CACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGCCAGGCGCCTGCAGTTaGTTGTTGGCCAGGTTGAGC | + |
Preference number: 4 (lower is better) Translates to: HSVPGTQGEGTWKTVCPEPGACS*LLARLS Trigger: GCTCAACCTGGCCAACAATCAACTGCAGGCGCCTGG...CTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR TCA 90 bp | CACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGTTGTGTGCCAGTGCGTaGGCCAGTGACTGTGCGCCA | + |
Preference number: 4 (lower is better) Translates to: HSVPGTQGEGTWKTVCPELCASA*ASDCAP Trigger: TGGCGCACAGTCACTGGCTCACGCACTGGCACACAA...CTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR TCA 90 bp | GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCTTGTGTGCCAGTGCGTaGGCCAGTGACTGTGCGCCA | + |
Preference number: 4 (lower is better) Translates to: ERVPGRLYVLRIRACGVGLCASA*ASDCAP Trigger: TGGCGCACAGTCACTGGCTCACGCACTGGCACACAA...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCACGTGGGTCCTGTGCTaGAGCTGCCCAAGGCAGAGA | + |
Preference number: 4 (lower is better) Translates to: ERVPGRLYVLRIRACGVGTWVLC*SCPRQR Trigger: TCTCTGCCTTGGGCAGCTCCAGCACAGGACCCACGT...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | CACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGCGGCATCCGCACAGGTaGGAGGAACTGGTCCACATG | + |
Preference number: 4 (lower is better) Translates to: HSVPGTQGEGTWKTVCPERHPHR*EELVHM Trigger: CATGTGGACCAGTTCCTCCCACCTGTGCGGATGCCG...CTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCCGGCATCCGCACAGGTaGGAGGAACTGGTCCACATG | + |
Preference number: 4 (lower is better) Translates to: ERVPGRLYVLRIRACGVGRHPHR*EELVHM Trigger: CATGTGGACCAGTTCCTCCCACCTGTGCGGATGCCG...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | GGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTTCCTCCAGGGCTGGGTaGTCCAGCAGGCTACGGATT | + |
Preference number: 4 (lower is better) Translates to: GSHSVPGTQGEGTWKTVCSSRAG*SSRLRI Trigger: AATCCGTAGCCTGCTGGACCACCCAGCCCTGGAGGA...ACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | GCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCAGAGGAGTGTGGCTGTaGGCTCAGACAGCTTGTTGC | + |
Preference number: 4 (lower is better) Translates to: AKSPWSAGPLGLQLQSPIRGVWL*AQTACC Trigger: GCAACAAGCTGTCTGAGCCCACAGCCACACTCCTCT...GATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR TCA 90 bp | CACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGAGGTACGATGGCCAGTaGCCACTCTGCATCCTCGGA | + |
Preference number: 4 (lower is better) Translates to: HSVPGTQGEGTWKTVCPERYDGQ*PLCILG Trigger: TCCGAGGATGCAGAGTGGTCACTGGCCATCGTACCT...CTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | CACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGGTGTCAGGAGGACGTGGGTCCTGTaGTGGAGCTGCCCAAGGCAG | + |
Preference number: 4 (lower is better) Translates to: HTPSHLHVCTLELSEGVRRTWVL*WSCPRQ Trigger: CTGCCTTGGGCAGCTCCAGCACAGGACCCACGTCCT...CCTGACACCCTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | GGGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTTGTTGCCACCAAGGTaGAGCACGGAGAGGCACTTG | + |
Preference number: 4 (lower is better) Translates to: GQSQRARDSRRGYLEDCMLLPPR*STERHL Trigger: CAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAA...CATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATACTCTCAGGCGACTGTaGCTCAGCAGCTTAGCCGCT | + |
Preference number: 4 (lower is better) Translates to: LLSACFLQRVPGVQALLDTLRRL*LSSLAA Trigger: AGCGGCTAAGCTGCTGAGCCACAGTCGCCTGAGAGT...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR CAA 72 bp | CTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATaGCAGCTGCAGTCGCCCATCTTTGAGGTAGACGGG | + |
Preference number: 4 (lower is better) Translates to: LAKSPWSAGPLG*QLQSPIFEVDG Trigger: CCCGTCTACCTCAAAGATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGTTCCAGCTGCCGCCGTaGCTGGACACGTGGCACACG | + |
Preference number: 4 (lower is better) Translates to: THTHTPSHLHVCTLELSEFQLPP*LDTWHT Trigger: CGTGTGCCACGTGTCCAGGCACGGCGGCAGCTGGAA...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATAGAGGAGTGTGGCTGTaGGCTCAGACAGCTTGTTGC | + |
Preference number: 4 (lower is better) Translates to: LLSACFLQRVPGVQALLDRGVWL*AQTACC Trigger: GCAACAAGCTGTCTGAGCCCACAGCCACACTCCTCT...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATAGCTTTGATGGTGGCTaGCAGAGAGTAGCAGTCTCG | + |
Preference number: 4 (lower is better) Translates to: LLSACFLQRVPGVQALLDSFDGG*QRVAVS Trigger: CGAGACTGCTACTCTCTGGCAGCCACCATCAAAGCT...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | GGCTCGGGAGAAGACAGGCCTCTGTCAAATTGGGTGCATCACACTGTGGCCTTTTTGTTGCCACCAAGGTaGAGCACGGAGAGGCACTTG | + |
Preference number: 4 (lower is better) Translates to: GSGEDRPLSNWVHHTVAFLLPPR*STERHL Trigger: CAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAA...AAAGGCCACAGTGTGATGCACCCAATTTGACAGAGGCCTGTCTTCTCCCGAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | GGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTTGCTTCCCACCATCCTaGCCAATGTGGTTGCAGGAT | + |
Preference number: 4 (lower is better) Translates to: GSHSVPGTQGEGTWKTVCCFPPS*PMWLQD Trigger: ATCCTGCAACCACATTGGGCAGGATGGTGGGAAGCA...ACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | GGCTCGGGAGAAGACAGGCCTCTGTCAAATTGGGTGCATCACACTGTGGCCTTTATGCCTTCCAGGAGTTaGTTCCCACCATCCTGCCCA | + |
Preference number: 4 (lower is better) Translates to: GSGEDRPLSNWVHHTVAFMPSRS*FPPSCP Trigger: TGGGCAGGATGGTGGGAAGCAACTCCTGGAAGGCAT...AAAGGCCACAGTGTGATGCACCCAATTTGACAGAGGCCTGTCTTCTCCCGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | CACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGTCTCCGATGAGGTTGTaGGATAAGTCCAGCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: HSVPGTQGEGTWKTVCPESPMRL*DKSSSS Trigger: GGAGGAGCTGGACTTATCCCACAACCTCATCGGAGA...CTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATAGGTACTCGCTCTCCTaGGATACATCTGACAGTCGC | + |
Preference number: 4 (lower is better) Translates to: LLSACFLQRVPGVQALLDRYSLS*DTSDSR Trigger: GCGACTGTCAGATGTATCCCAGGAGAGCGAGTACCT...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | GTGTGTGTGTGTAGACTGAGGTCAGGGCTCAGCTATCTGCTTAGTAAAAAGGGAGTCCTGTGCTGGAGCTaGCCAAGGCAGAGACCTGGC | + |
Preference number: 4 (lower is better) Translates to: VCVCRLRSGLSYLLSKKGVLCWS*PRQRPG Trigger: GCCAGGTCTCTGCCTTGGGCAGCTCCAGCACAGGAC...TCCCTTTTTACTAAGCAGATAGCTGAGCCCTGACCTCAGTCTACACACACACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | GTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGATGCCTTCCAGGAGTTaGTTCCCACCATCCTGCCCA | + |
Preference number: 4 (lower is better) Translates to: VPGTQGEGTWKTVCPEDKMPSRS*FPPSCP Trigger: TGGGCAGGATGGTGGGAAGCAACTCCTGGAAGGCAT...CTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR TCA 90 bp | ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGGGTGTGGCAAGCTTTaGTGGTGGCTGCCAGAGAGT | + |
Preference number: 4 (lower is better) Translates to: THTHTPSHLHVCTLELSEGCGKL*WWLPES Trigger: ACTCTCTGGCAGCCACCATCAAAGCTTGCCACACCC...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | ATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTCAGCAGCTTAGCCGCTaGTCGTGCACCACGGTCTCC | + |
Preference number: 4 (lower is better) Translates to: MKSLSRDGLLESFAFPVPQQLSR*SCTTVS Trigger: GGAGACCGTGGTGCACGAGCAGCGGCTAAGCTGCTG...AGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | GGGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCTTGTTGTCTGATATaGCTTCCAGGAGTTGCTTCC | + |
Preference number: 4 (lower is better) Translates to: GQSQRARDSRRGYLEDCMSCCLI*LPGVAS Trigger: GGAAGCAACTCCTGGAAGGCATATCAGACAACAAGA...CATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | GAACCTCTGCTAGCAGCTGTGGCTACACACACACACACACACACACACACACACTTGGCATGCAGAACCTaGCCAATGAGGTACTCGCTC | + |
Preference number: 4 (lower is better) Translates to: EPLLAAVATHTHTHTHTHLACRT*PMRYSL Trigger: GAGCGAGTACCTCATTGGCCAGGTTCTGCATGCCAA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCCACAGCTGCTAGCAGAGGTTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR TCA 90 bp | GGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTAATGGTCTTGTTGTCTaGTATGCCTTCCAGGAGTTG | + |
Preference number: 4 (lower is better) Translates to: GSHSVPGTQGEGTWKTVCNGLVV*YAFQEL Trigger: CAACTCCTGGAAGGCATATCAGACAACAAGACCATT...ACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR TCA 90 bp | CACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGGTGTCAGGACAGTTGTTAGTGGGTaGGGAGAAGTGGCCAGGATT | + |
Preference number: 4 (lower is better) Translates to: HTPSHLHVCTLELSEGVRTVVSG*GEVARI Trigger: AATCCTGGCCACTTCTCCTCACCCACTAACAACTGT...CCTGACACCCTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | ATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTGTGGGTGAGGAGAAGTaGCCAGGATTCAGGGTCCGC | + |
Preference number: 4 (lower is better) Translates to: MKSLSRDGLLESFAFPVPVGEEK*PGFRVR Trigger: GCGGACCCTGAATCCTGGCCACTTCTCCTCACCCAC...AGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR TCA 90 bp | GTGTGTGTGTGTAGACTGAGGTCAGGGCTCAGCTATCTGCTTAGTAAAAAGGGACACCACGGTCTCCGATaGGGTTGTGGGATAAGTCCA | + |
Preference number: 4 (lower is better) Translates to: VCVCRLRSGLSYLLSKKGHHGLR*GCGISP Trigger: TGGACTTATCCCACAACCTCATCGGAGACCGTGGTG...TCCCTTTTTACTAAGCAGATAGCTGAGCCCTGACCTCAGTCTACACACACACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | ACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACAGGCGCACGTAGTTCCTaGAGAGGGGCAGCAGGTCCA | + |
Preference number: 4 (lower is better) Translates to: TLWPFCHGIPSAKIVQITGARSS*RGAAGP Trigger: TGGACCTGCTGCCCCTCTGCAGGAACTACGTGCGCC...TGTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | ATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTGGACATTTGGGACCTTaGTCTTCAGCTGGCCTGGGG | + |
Preference number: 4 (lower is better) Translates to: MKSLSRDGLLESFAFPVPGHLGP*SSAGLG Trigger: CCCCAGGCCAGCTGAAGACCAAGGTCCCAAATGTCC...AGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | GAACCTCTGCTAGCAGCTGTGGCTACACACACACACACACACACACACACACACAAGATCTTGAGGGTGTaGCAAGCTTTGATGGTGGCT | + |
Preference number: 4 (lower is better) Translates to: EPLLAAVATHTHTHTHTHKILRV*QALMVA Trigger: AGCCACCATCAAAGCTTGCCACACCCTCAAGATCTT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCCACAGCTGCTAGCAGAGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | ATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTTCTGGGAGAGGAGTGTaGCTGTGGGCTCAGACAGCT | + |
Preference number: 4 (lower is better) Translates to: MKSLSRDGLLESFAFPVPSGRGV*LWAQTA Trigger: AGCTGTCTGAGCCCACAGCCACACTCCTCTCCCAGA...AGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCGGTCGAACTCTAGAATaGTCTTGTTGTCTGATATGC | + |
Preference number: 4 (lower is better) Translates to: ERVPGRLYVLRIRACGVGGRTLE*SCCLIC Trigger: GCATATCAGACAACAAGACCATTCTAGAGTTCGACC...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR TCA 90 bp | CACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGGTGTCAGGAATGGTCTTGTTGTCTaGTATGCCTTCCAGGAGTTG | + |
Preference number: 4 (lower is better) Translates to: HTPSHLHVCTLELSEGVRNGLVV*YAFQEL Trigger: CAACTCCTGGAAGGCATATCAGACAACAAGACCATT...CCTGACACCCTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | GTGTGTGTGTGTAGACTGAGGTCAGGGCTCAGCTATCTGCTTAGTAAAAAGGGAAGCTTTGATGGTGGCTaGCAGAGAGTAGCAGTCTCG | + |
Preference number: 4 (lower is better) Translates to: VCVCRLRSGLSYLLSKKGSFDGG*QRVAVS Trigger: CGAGACTGCTACTCTCTGGCAGCCACCATCAAAGCT...TCCCTTTTTACTAAGCAGATAGCTGAGCCCTGACCTCAGTCTACACACACACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | ACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACAGTGGGTGAGGAGAAGTaGCCAGGATTCAGGGTCCGC | + |
Preference number: 4 (lower is better) Translates to: TLWPFCHGIPSAKIVQITVGEEK*PGFRVR Trigger: GCGGACCCTGAATCCTGGCCACTTCTCCTCACCCAC...TGTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR TCA 90 bp | GTGTGTGTGTGTAGACTGAGGTCAGGGCTCAGCTATCTGCTTAGTAAAAAGGGAACAGTTGTTAGTGGGTaGGGAGAAGTGGCCAGGATT | + |
Preference number: 4 (lower is better) Translates to: VCVCRLRSGLSYLLSKKGTVVSG*GEVARI Trigger: AATCCTGGCCACTTCTCCTCACCCACTAACAACTGT...TCCCTTTTTACTAAGCAGATAGCTGAGCCCTGACCTCAGTCTACACACACACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | ACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACATCTGGGAGAGGAGTGTaGCTGTGGGCTCAGACAGCT | + |
Preference number: 4 (lower is better) Translates to: TLWPFCHGIPSAKIVQITSGRGV*LWAQTA Trigger: AGCTGTCTGAGCCCACAGCCACACTCCTCTCCCAGA...TGTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | GTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGTCGAACTCTAGAATaGTCTTGTTGTCTGATATGC | + |
Preference number: 4 (lower is better) Translates to: VPGTQGEGTWKTVCPEDKGRTLE*SCCLIC Trigger: GCATATCAGACAACAAGACCATTCTAGAGTTCGACC...CTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | ATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTAGGTACTCGCTCTCCTaGGATACATCTGACAGTCGC | + |
Preference number: 4 (lower is better) Translates to: MKSLSRDGLLESFAFPVPRYSLS*DTSDSR Trigger: GCGACTGTCAGATGTATCCCAGGAGAGCGAGTACCT...AGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | CACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACTGCTCTAGCGGCAGCTaGTTCAGGATAGGGTTGTTC | + |
Preference number: 4 (lower is better) Translates to: HTVAFLSWNSKRKDCTNHCSSGS*FRIGLF Trigger: GAACAACCCTATCCTGAAGCAGCTGCCGCTAGAGCA...GTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | CACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACTGCTTCCCACCATCCTaGCCAATGTGGTTGCAGGAT | + |
Preference number: 4 (lower is better) Translates to: HTVAFLSWNSKRKDCTNHCFPPS*PMWLQD Trigger: ATCCTGCAACCACATTGGGCAGGATGGTGGGAAGCA...GTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | TTTACACTGAATGTTCTTGTTTCTCTAATTAGAACCTCTGCTAGCAGCTGTGGCGGACATTTGGGACCTTaGTCTTCAGCTGGCCTGGGG | + |
Preference number: 4 (lower is better) Translates to: FTLNVLVSLIRTSASSCGGHLGP*SSAGLG Trigger: CCCCAGGCCAGCTGAAGACCAAGGTCCCAAATGTCC...GCCACAGCTGCTAGCAGAGGTTCTAATTAGAGAAACAAGAACATTCAGTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | CACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGGTGTCAGGAGGATAGGGTTGTTCTaGAAGTTCTTGACGATATGT | + |
Preference number: 4 (lower is better) Translates to: HTPSHLHVCTLELSEGVRRIGLF*KFLTIC Trigger: ACATATCGTCAAGAACTTCCAGAACAACCCTATCCT...CCTGACACCCTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | GTGTGTGTGTGTAGACTGAGGTCAGGGCTCAGCTATCTGCTTAGTAAAAAGGGAAAGATCTTGAGGGTGTaGCAAGCTTTGATGGTGGCT | + |
Preference number: 4 (lower is better) Translates to: VCVCRLRSGLSYLLSKKGKILRV*QALMVA Trigger: AGCCACCATCAAAGCTTGCCACACCCTCAAGATCTT...TCCCTTTTTACTAAGCAGATAGCTGAGCCCTGACCTCAGTCTACACACACACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | CACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACTCTCCGATGAGGTTGTaGGATAAGTCCAGCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: HTVAFLSWNSKRKDCTNHSPMRL*DKSSSS Trigger: GGAGGAGCTGGACTTATCCCACAACCTCATCGGAGA...GTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CCA 90 bp | TTTACACTGAATGTTCTTGTTTCTCTAATTAGAACCTCTGCTAGCAGCTGTGGCACTCTCAGGCGACTGTaGCTCAGCAGCTTAGCCGCT | + |
Preference number: 4 (lower is better) Translates to: FTLNVLVSLIRTSASSCGTLRRL*LSSLAA Trigger: AGCGGCTAAGCTGCTGAGCCACAGTCGCCTGAGAGT...GCCACAGCTGCTAGCAGAGGTTCTAATTAGAGAAACAAGAACATTCAGTGTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR TCA 90 bp | TTTACACTGAATGTTCTTGTTTCTCTAATTAGAACCTCTGCTAGCAGCTGTGGCTCATGCCACAGTCTTTaGCGCCGTACACCAGGTCCA | + |
Preference number: 4 (lower is better) Translates to: FTLNVLVSLIRTSASSCGSCHSL*RRTPGP Trigger: TGGACCTGGTGTACGGCGTCAAAGACTGTGGCATGA...GCCACAGCTGCTAGCAGAGGTTCTAATTAGAGAAACAAGAACATTCAGTGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR GCA 90 bp | ATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTTCTTGTTGTCTGATATaGCTTCCAGGAGTTGCTTCC | + |
Preference number: 4 (lower is better) Translates to: MKSLSRDGLLESFAFPVPSCCLI*LPGVAS Trigger: GGAAGCAACTCCTGGAAGGCATATCAGACAACAAGA...AGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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3UTR CAA 72 bp | TGCACACATTTCATCCTTAGGTGCCCCTTCTGTACCTaGGCATCTTCATATATACAAATCTGGCTGCTCATT | + |
Preference number: 4 (lower is better) Translates to: CTHFILRCPFCT*ASSYIQIWLLI Trigger: AATGAGCAGCCAGATTTGTATATATGAAGATGCCAAGGTACAGAAGGGGCACCTAAGGATGAAATGTGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS GCA 90 bp | GCGGGGTCGGCATCCGCACAGGTGGGAGGAACTGGTCCACATGAATaGGGCGCACGTAGTTCCTGCAGAGGGGCAGCAGGTCCAGGATCA | + |
Preference number: 5 (lower is better) Translates to: AGSASAQVGGTGPHE*GARSSCRGAAGPGS Trigger: TGATCCTGGACCTGCTGCCCCTCTGCAGGAACTACGTGCGCCGCATTCATGTGGACCAGTTCCTCCCACCTGTGCGGATGCCGACCCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CCA 90 bp | CCACCAAGGTGCAGCACGGAGAGGCACTTGTTGGTCTCCAGGGCGTaGGCGATTGCTTGGCCACCCTCGTCCTCGATACAGTTGAGGCGG | + |
Preference number: 5 (lower is better) Translates to: PPRCSTERHLLVSRA*AIAWPPSSSIQLRR Trigger: CCGCCTCAACTGTATCGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS GCA 90 bp | TTCTCCAGGTGTCTCTCGAAGAACATACGCTTCCAGCTGCCGCCGTaGCTGGACACGTGGCACACGGACCAGCGCTTGATGCAGCAGCGG | + |
Preference number: 5 (lower is better) Translates to: FSRCLSKNIRFQLPP*LDTWHTDQRLMQQR Trigger: CCGCTGCTGCATCAAGCGCTGGTCCGTGTGCCACGTGTCCAGGCACGGCGGCAGCTGGAAGCGTATGTTCTTCGAGAGACACCTGGAGAA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS GCA 90 bp | GTGCAGCACGGAGAGGCACTTGTTGGTCTCCAGGGCGTGGGCGATTaGTTGGCCACCCTCGTCCTCGATACAGTTGAGGCGGAGGTTGAG | + |
Preference number: 5 (lower is better) Translates to: VQHGEALVGLQGVGD*LATLVLDTVEAEVE Trigger: CTCAACCTCCGCCTCAACTGTATCGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CCA 90 bp | CAGACAGCTTGTTGCCACCAAGGTGCAGCACGGAGAGGCACTTGTTaGTCTCCAGGGCGTGGGCGATTGCTTGGCCACCCTCGTCCTCGA | + |
Preference number: 5 (lower is better) Translates to: QTACCHQGAARRGTC*SPGRGRLLGHPRPR Trigger: TCGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAAGCTGTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS TCA 90 bp | TCCGCTGGCGGGCAGCCTCTCGGTTGGCATGCAGAACCTGGCCAATaGGGTACTCGCTCTCCTGGGATACATCTGACAGTCGCAGGTCGA | + |
Preference number: 5 (lower is better) Translates to: SAGGQPLGWHAEPGQ*GTRSPGIHLTVAGR Trigger: TCGACCTGCGACTGTCAGATGTATCCCAGGAGAGCGAGTACCTCATTGGCCAGGTTCTGCATGCCAACCGAGAGGCTGCCCGCCAGCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS GCA 90 bp | GAGAGGAGTGTGGCTGTGGGCTCAGACAGCTTGTTGCCACCAAGGTaGAGCACGGAGAGGCACTTGTTGGTCTCCAGGGCGTGGGCGATT | + |
Preference number: 5 (lower is better) Translates to: ERSVAVGSDSLLPPR*STERHLLVSRAWAI Trigger: AATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAAGCTGTCTGAGCCCACAGCCACACTCCTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS GCA 90 bp | TGGCCAGGATTCAGGGTCCGCTGGCGGGCAGCCTCTCGGTTGGCATaGAGAACCTGGCCAATGAGGTACTCGCTCTCCTGGGATACATCT | + |
Preference number: 5 (lower is better) Translates to: WPGFRVRWRAASRLA*RTWPMRYSLSWDTS Trigger: AGATGTATCCCAGGAGAGCGAGTACCTCATTGGCCAGGTTCTGCATGCCAACCGAGAGGCTGCCCGCCAGCGGACCCTGAATCCTGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CCA 90 bp | CCACTCTGCATCCTCGGAGATGATCCTGCGCATGCGACGGACATTTaGGACCTTGGTCTTCAGCTGGCCTGGGGTAGGGGTGCTGCTGGT | + |
Preference number: 5 (lower is better) Translates to: PLCILGDDPAHATDI*DLGLQLAWGRGAAG Trigger: ACCAGCAGCACCCCTACCCCAGGCCAGCTGAAGACCAAGGTCCCAAATGTCCGTCGCATGCGCAGGATCATCTCCGAGGATGCAGAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CCA 90 bp | AGCACGGAGAGGCACTTGTTGGTCTCCAGGGCGTGGGCGATTGCTTaGCCACCCTCGTCCTCGATACAGTTGAGGCGGAGGTTGAGGAAG | + |
Preference number: 5 (lower is better) Translates to: STERHLLVSRAWAIA*PPSSSIQLRRRLRK Trigger: CTTCCTCAACCTCCGCCTCAACTGTATCGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CCA 90 bp | TTCAGGGTCCGCTGGCGGGCAGCCTCTCGGTTGGCATGCAGAACCTaGCCAATGAGGTACTCGCTCTCCTGGGATACATCTGACAGTCGC | + |
Preference number: 5 (lower is better) Translates to: FRVRWRAASRLACRT*PMRYSLSWDTSDSR Trigger: GCGACTGTCAGATGTATCCCAGGAGAGCGAGTACCTCATTGGCCAGGTTCTGCATGCCAACCGAGAGGCTGCCCGCCAGCGGACCCTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CCA 90 bp | CAGTTGTTAGTGGGTGAGGAGAAGTGGCCAGGATTCAGGGTCCGCTaGCGGGCAGCCTCTCGGTTGGCATGCAGAACCTGGCCAATGAGG | + |
Preference number: 5 (lower is better) Translates to: QLLVGEEKWPGFRVR*RAASRLACRTWPMR Trigger: CCTCATTGGCCAGGTTCTGCATGCCAACCGAGAGGCTGCCCGCCAGCGGACCCTGAATCCTGGCCACTTCTCCTCACCCACTAACAACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCCACACGGACCAGCGCTaGATGCAGCAGCGGTGCCAG | + |
Preference number: 5 (lower is better) Translates to: ERVPGRLYVLRIRACGVGHTDQR*MQQRCQ Trigger: CTGGCACCGCTGCTGCATCAAGCGCTGGTCCGTGTG...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATACGGAGAGGCACTTGTaGGTCTCCAGGGCGTGGGCG | + |
Preference number: 5 (lower is better) Translates to: LLSACFLQRVPGVQALLDTERHL*VSRAWA Trigger: CGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGT...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | GCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCGGCTCAGACAGCTTGTaGCCACCAAGGTGCAGCACG | + |
Preference number: 5 (lower is better) Translates to: AKSPWSAGPLGLQLQSPIGSDSL*PPRCST Trigger: CGTGCTGCACCTTGGTGGCAACAAGCTGTCTGAGCC...GATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS TCA 90 bp | GTCCTGTGCTGGAGCTGCCCAAGGCAGAGACCTGGCGCTGGATGGTaGGAACCGACTGGCTGTGAGACGAAGAGTTGGACGGTACTGATG | + |
Preference number: 5 (lower is better) Translates to: VLCWSCPRQRPGAGW*EPTGCETKSWTVLM Trigger: CATCAGTACCGTCCAACTCTTCGTCTCACAGCCAGTCGGTTCTCACCATCCAGCGCCAGGTCTCTGCCTTGGGCAGCTCCAGCACAGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | GCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCCAGTTGAGGCGGAGGTaGAGGAAGACCAGGTTGGTG | + |
Preference number: 5 (lower is better) Translates to: AKSPWSAGPLGLQLQSPIQLRRR*RKTRLV Trigger: CACCAACCTGGTCTTCCTCAACCTCCGCCTCAACTG...GATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCCGGACATTTGGGACCTaGGTCTTCAGCTGGCCTGGG | + |
Preference number: 5 (lower is better) Translates to: ERVPGRLYVLRIRACGVGRTFGT*VFSWPG Trigger: CCCAGGCCAGCTGAAGACCAAGGTCCCAAATGTCCG...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | GCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCGCATGCGACGGACATTaGGGACCTTGGTCTTCAGCT | + |
Preference number: 5 (lower is better) Translates to: AKSPWSAGPLGLQLQSPIACDGH*GPWSSA Trigger: AGCTGAAGACCAAGGTCCCAAATGTCCGTCGCATGC...GATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | TGTGATTCCTATGGGTGTGGCCCCATGGTGGGCAGTCACAGCGTGCCAGGGACTGCATGCGACGGACATTaGGGACCTTGGTCTTCAGCT | + |
Preference number: 5 (lower is better) Translates to: CDSYGCGPMVGSHSVPGTACDGH*GPWSSA Trigger: AGCTGAAGACCAAGGTCCCAAATGTCCGTCGCATGC...AGTCCCTGGCACGCTGTGACTGCCCACCATGGGGCCACACCCATAGGAATCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | GTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGCACACGGACCAGCGCTaGATGCAGCAGCGGTGCCAG | + |
Preference number: 5 (lower is better) Translates to: VPGTQGEGTWKTVCPEDKHTDQR*MQQRCQ Trigger: CTGGCACCGCTGCTGCATCAAGCGCTGGTCCGTGTG...CTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | TGTGATTCCTATGGGTGTGGCCCCATGGTGGGCAGTCACAGCGTGCCAGGGACTTTCATGCCACAGTCTTaGACGCCGTACACCAGGTCC | + |
Preference number: 5 (lower is better) Translates to: CDSYGCGPMVGSHSVPGTFMPQS*TPYTRS Trigger: GGACCTGGTGTACGGCGTCAAAGACTGTGGCATGAA...AGTCCCTGGCACGCTGTGACTGCCCACCATGGGGCCACACCCATAGGAATCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | GAACCTCTGCTAGCAGCTGTGGCTACACACACACACACACACACACACACACACACGGAGAGGCACTTGTaGGTCTCCAGGGCGTGGGCG | + |
Preference number: 5 (lower is better) Translates to: EPLLAAVATHTHTHTHTHTERHL*VSRAWA Trigger: CGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCCACAGCTGCTAGCAGAGGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCGGCTCAGACAGCTTGTaGCCACCAAGGTGCAGCACG | + |
Preference number: 5 (lower is better) Translates to: ERVPGRLYVLRIRACGVGGSDSL*PPRCST Trigger: CGTGCTGCACCTTGGTGGCAACAAGCTGTCTGAGCC...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATCGGTCTCCGATGAGGTaGTGGGATAAGTCCAGCTCC | + |
Preference number: 5 (lower is better) Translates to: LLSACFLQRVPGVQALLDRSPMR*WDKSSS Trigger: GGAGCTGGACTTATCCCACAACCTCATCGGAGACCG...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCCGGTCTCCGATGAGGTaGTGGGATAAGTCCAGCTCC | + |
Preference number: 5 (lower is better) Translates to: ERVPGRLYVLRIRACGVGRSPMR*WDKSSS Trigger: GGAGCTGGACTTATCCCACAACCTCATCGGAGACCG...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | CACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGTTCATGCCACAGTCTTaGACGCCGTACACCAGGTCC | + |
Preference number: 5 (lower is better) Translates to: HSVPGTQGEGTWKTVCPEFMPQS*TPYTRS Trigger: GGACCTGGTGTACGGCGTCAAAGACTGTGGCATGAA...CTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATGTCAGCTTGAAGATCTaGAGGGTGTGGCAAGCTTTG | + |
Preference number: 5 (lower is better) Translates to: LLSACFLQRVPGVQALLDVSLKI*RVWQAL Trigger: CAAAGCTTGCCACACCCTCAAGATCTTCAAGCTGAC...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS TCA 90 bp | GATATGTTGAATGCAGAGTTCTGTAAGGAGAGGTACGATGGCCAGTaGCCACTCTGCATCCTCGGAGATGATCCTGCGCATGCGACGGAC | + |
Preference number: 5 (lower is better) Translates to: DMLNAEFCKERYDGQ*PLCILGDDPAHATD Trigger: GTCCGTCGCATGCGCAGGATCATCTCCGAGGATGCAGAGTGGTCACTGGCCATCGTACCTCTCCTTACAGAACTCTGCATTCAACATATC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CCA 90 bp | TCTCGGTTGGCATGCAGAACCTGGCCAATGAGGTACTCGCTCTCCTaGGATACATCTGACAGTCGCAGGTCGAACTCTAGAATGGTCTTG | + |
Preference number: 5 (lower is better) Translates to: SRLACRTWPMRYSLS*DTSDSRRSNSRMVL Trigger: CAAGACCATTCTAGAGTTCGACCTGCGACTGTCAGATGTATCCCAGGAGAGCGAGTACCTCATTGGCCAGGTTCTGCATGCCAACCGAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGAGGGTGTGGCAAGCTTaGATGGTGGCTGCCAGAGAG | + |
Preference number: 5 (lower is better) Translates to: THTHTPSHLHVCTLELSERVWQA*MVAARE Trigger: CTCTCTGGCAGCCACCATCAAAGCTTGCCACACCCT...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGTATGCCTTCCAGGAGTaGCTTCCCACCATCCTGCCC | + |
Preference number: 5 (lower is better) Translates to: THTHTPSHLHVCTLELSEYAFQE*LPTILP Trigger: GGGCAGGATGGTGGGAAGCAACTCCTGGAAGGCATA...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS GCA 90 bp | GGTCAGCTTGAAGATCTTGAGGGTGTGGCAAGCTTTGATGGTGGCTaGCAGAGAGTAGCAGTCTCGGTAGGTGAAGAGAAAGAGGTTCCA | + |
Preference number: 5 (lower is better) Translates to: GQLEDLEGVASFDGG*QRVAVSVGEEKEVP Trigger: TGGAACCTCTTTCTCTTCACCTACCGAGACTGCTACTCTCTGGCAGCCACCATCAAAGCTTGCCACACCCTCAAGATCTTCAAGCTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS GCA 90 bp | CTGACAGTCGCAGGTCGAACTCTAGAATGGTCTTGTTGTCTGATATaGCTTCCAGGAGTTGCTTCCCACCATCCTGCCCAATGTGGTTGC | + |
Preference number: 5 (lower is better) Translates to: LTVAGRTLEWSCCLI*LPGVASHHPAQCGC Trigger: GCAACCACATTGGGCAGGATGGTGGGAAGCAACTCCTGGAAGGCATATCAGACAACAAGACCATTCTAGAGTTCGACCTGCGACTGTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CCA 90 bp | CGCTCTCCTGGGATACATCTGACAGTCGCAGGTCGAACTCTAGAATaGTCTTGTTGTCTGATATGCCTTCCAGGAGTTGCTTCCCACCAT | + |
Preference number: 5 (lower is better) Translates to: RSPGIHLTVAGRTLE*SCCLICLPGVASHH Trigger: ATGGTGGGAAGCAACTCCTGGAAGGCATATCAGACAACAAGACCATTCTAGAGTTCGACCTGCGACTGTCAGATGTATCCCAGGAGAGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | CACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACCGGACATTTGGGACCTaGGTCTTCAGCTGGCCTGGG | + |
Preference number: 5 (lower is better) Translates to: HTVAFLSWNSKRKDCTNHRTFGT*VFSWPG Trigger: CCCAGGCCAGCTGAAGACCAAGGTCCCAAATGTCCG...GTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | ATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTTATGCCTTCCAGGAGTaGCTTCCCACCATCCTGCCC | + |
Preference number: 5 (lower is better) Translates to: MKSLSRDGLLESFAFPVPYAFQE*LPTILP Trigger: GGGCAGGATGGTGGGAAGCAACTCCTGGAAGGCATA...AGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | CACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACAGGGTGTGGCAAGCTTaGATGGTGGCTGCCAGAGAG | + |
Preference number: 5 (lower is better) Translates to: HTVAFLSWNSKRKDCTNHRVWQA*MVAARE Trigger: CTCTCTGGCAGCCACCATCAAAGCTTGCCACACCCT...GTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGTTACTTCGGGTCAGCTaGAAGATCTTGAGGGTGTGG | + |
Preference number: 5 (lower is better) Translates to: THTHTPSHLHVCTLELSELLRVS*KILRVW Trigger: CCACACCCTCAAGATCTTCAAGCTGACCCGAAGTAA...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | ATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTTTGAGGAAGACCAGGTaGGTGTTGTGTGCCAGTGCG | + |
Preference number: 5 (lower is better) Translates to: MKSLSRDGLLESFAFPVPLRKTR*VLCASA Trigger: CGCACTGGCACACAACACCAACCTGGTCTTCCTCAA...AGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | CACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACCAGTTGAGGCGGAGGTaGAGGAAGACCAGGTTGGTG | + |
Preference number: 5 (lower is better) Translates to: HTVAFLSWNSKRKDCTNHQLRRR*RKTRLV Trigger: CACCAACCTGGTCTTCCTCAACCTCCGCCTCAACTG...GTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | GAACCTCTGCTAGCAGCTGTGGCTACACACACACACACACACACACACACACACTCTAGAATGGTCTTGTaGTCTGATATGCCTTCCAGG | + |
Preference number: 5 (lower is better) Translates to: EPLLAAVATHTHTHTHTHSRMVL*SDMPSR Trigger: CCTGGAAGGCATATCAGACAACAAGACCATTCTAGA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCCACAGCTGCTAGCAGAGGTTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | GGCTCGGGAGAAGACAGGCCTCTGTCAAATTGGGTGCATCACACTGTGGCCTTTAACTCTAGAATGGTCTaGTTGTCTGATATGCCTTCC | + |
Preference number: 5 (lower is better) Translates to: GSGEDRPLSNWVHHTVAFNSRMV*LSDMPS Trigger: GGAAGGCATATCAGACAACAAGACCATTCTAGAGTT...AAAGGCCACAGTGTGATGCACCCAATTTGACAGAGGCCTGTCTTCTCCCGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | GTGTGTGTGTGTAGACTGAGGTCAGGGCTCAGCTATCTGCTTAGTAAAAAGGGAGTCAGCTTGAAGATCTaGAGGGTGTGGCAAGCTTTG | + |
Preference number: 5 (lower is better) Translates to: VCVCRLRSGLSYLLSKKGVSLKI*RVWQAL Trigger: CAAAGCTTGCCACACCCTCAAGATCTTCAAGCTGAC...TCCCTTTTTACTAAGCAGATAGCTGAGCCCTGACCTCAGTCTACACACACACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | GTGTGTGTGTGTAGACTGAGGTCAGGGCTCAGCTATCTGCTTAGTAAAAAGGGATTACTTCGGGTCAGCTaGAAGATCTTGAGGGTGTGG | + |
Preference number: 5 (lower is better) Translates to: VCVCRLRSGLSYLLSKKGLLRVS*KILRVW Trigger: CCACACCCTCAAGATCTTCAAGCTGACCCGAAGTAA...TCCCTTTTTACTAAGCAGATAGCTGAGCCCTGACCTCAGTCTACACACACACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS TCA 90 bp | AGCTGCTTCAGGATAGGGTTGTTCTGGAAGTTCTTGACGATATGTTaGATGCAGAGTTCTGTAAGGAGAGGTACGATGGCCAGTGACCAC | + |
Preference number: 5 (lower is better) Translates to: SCFRIGLFWKFLTIC*MQSSVRRGTMASDH Trigger: GTGGTCACTGGCCATCGTACCTCTCCTTACAGAACTCTGCATTCAACATATCGTCAAGAACTTCCAGAACAACCCTATCCTGAAGCAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGAATTCTCAGTACAGTaGTTAGTGGGTGAGGAGAAG | + |
Preference number: 5 (lower is better) Translates to: THTHTPSHLHVCTLELSEEFSVQ*LVGEEK Trigger: CTTCTCCTCACCCACTAACAACTGTACTGAGAATTC...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | TTTACACTGAATGTTCTTGTTTCTCTAATTAGAACCTCTGCTAGCAGCTGTGGCTTGAGGAAGACCAGGTaGGTGTTGTGTGCCAGTGCG | + |
Preference number: 5 (lower is better) Translates to: FTLNVLVSLIRTSASSCGLRKTR*VLCASA Trigger: CGCACTGGCACACAACACCAACCTGGTCTTCCTCAA...GCCACAGCTGCTAGCAGAGGTTCTAATTAGAGAAACAAGAACATTCAGTGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | GTGTGTGTGTGTAGACTGAGGTCAGGGCTCAGCTATCTGCTTAGTAAAAAGGGATCTAGAATGGTCTTGTaGTCTGATATGCCTTCCAGG | + |
Preference number: 5 (lower is better) Translates to: VCVCRLRSGLSYLLSKKGSRMVL*SDMPSR Trigger: CCTGGAAGGCATATCAGACAACAAGACCATTCTAGA...TCCCTTTTTACTAAGCAGATAGCTGAGCCCTGACCTCAGTCTACACACACACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | ATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTAACTCTAGAATGGTCTaGTTGTCTGATATGCCTTCC | + |
Preference number: 5 (lower is better) Translates to: MKSLSRDGLLESFAFPVPNSRMV*LSDMPS Trigger: GGAAGGCATATCAGACAACAAGACCATTCTAGAGTT...AGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | TTTACACTGAATGTTCTTGTTTCTCTAATTAGAACCTCTGCTAGCAGCTGTGGCGAATTCTCAGTACAGTaGTTAGTGGGTGAGGAGAAG | + |
Preference number: 5 (lower is better) Translates to: FTLNVLVSLIRTSASSCGEFSVQ*LVGEEK Trigger: CTTCTCCTCACCCACTAACAACTGTACTGAGAATTC...GCCACAGCTGCTAGCAGAGGTTCTAATTAGAGAAACAAGAACATTCAGTGTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS-3UTR CAA 90 bp | TTTACACTGAATGTTCTTGTTTCTCTAATTAGAACCTCTGCTAGCAGCTGTGGCGTTCTTGACGATATGTaGAATGCAGAGTTCTGTAAG | + |
Preference number: 5 (lower is better) Translates to: FTLNVLVSLIRTSASSCGVLDDM*NAEFCK Trigger: CTTACAGAACTCTGCATTCAACATATCGTCAAGAAC...GCCACAGCTGCTAGCAGAGGTTCTAATTAGAGAAACAAGAACATTCAGTGTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CCA 72 bp | TCGCCCTCACTGCCAGAGTCCGACTGTTCCTCTCCCTaGAGCGGGGTCGGCATCCGCACAGGTGGGAGGAAC | + |
Preference number: 6 (lower is better) Translates to: SPSLPESDCSSP*SGVGIRTGGRN Trigger: GTTCCTCCCACCTGTGCGGATGCCGACCCCGCTCCAGGGAGAGGAACAGTCGGACTCTGGCAGTGAGGGCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CCA 72 bp | GGGTGCTGCTGGTCTTCAAGGACGTGGGTCCTGTGCTaGAGCTGCCCAAGGCAGAGACCTGGCGCTGGATGG | + |
Preference number: 6 (lower is better) Translates to: GCCWSSRTWVLC*SCPRQRPGAGW Trigger: CCATCCAGCGCCAGGTCTCTGCCTTGGGCAGCTCCAGCACAGGACCCACGTCCTTGAAGACCAGCAGCACCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CCA 72 bp | AACATACGCTTCCAGCTGCCGCCGTGCCTGGACACGTaGCACACGGACCAGCGCTTGATGCAGCAGCGGTGC | + |
Preference number: 6 (lower is better) Translates to: NIRFQLPPCLDT*HTDQRLMQQRC Trigger: GCACCGCTGCTGCATCAAGCGCTGGTCCGTGTGCCACGTGTCCAGGCACGGCGGCAGCTGGAAGCGTATGTT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CCA 72 bp | GTGGGTGAGGAGAAGTGGCCAGGATTCAGGGTCCGCTaGCGGGCAGCCTCTCGGTTGGCATGCAGAACCTGG | + |
Preference number: 6 (lower is better) Translates to: VGEEKWPGFRVR*RAASRLACRTW Trigger: CCAGGTTCTGCATGCCAACCGAGAGGCTGCCCGCCAGCGGACCCTGAATCCTGGCCACTTCTCCTCACCCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS GCA 72 bp | TTCAGGGTCCGCTGGCGGGCAGCCTCTCGGTTGGCATaGAGAACCTGGCCAATGAGGTACTCGCTCTCCTGG | + |
Preference number: 6 (lower is better) Translates to: FRVRWRAASRLA*RTWPMRYSLSW Trigger: CCAGGAGAGCGAGTACCTCATTGGCCAGGTTCTGCATGCCAACCGAGAGGCTGCCCGCCAGCGGACCCTGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 72 bp | CCAGGATTCAGGGTCCGCTGGCGGGCAGCCTCTCGGTaGGCATGCAGAACCTGGCCAATGAGGTACTCGCTC | + |
Preference number: 6 (lower is better) Translates to: PGFRVRWRAASR*ACRTWPMRYSL Trigger: GAGCGAGTACCTCATTGGCCAGGTTCTGCATGCCAACCGAGAGGCTGCCCGCCAGCGGACCCTGAATCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 90 bp | CTCAGCAGCTTAGCCGCTGCTCGTGCACCACGGTCTCCGATGAGGTaGTGGGATAAGTCCAGCTCCTCCAGGGCTGGGTGGTCCAGCAGG | + |
Preference number: 6 (lower is better) Translates to: LSSLAAARAPRSPMR*WDKSSSSRAGWSSR Trigger: CCTGCTGGACCACCCAGCCCTGGAGGAGCTGGACTTATCCCACAACCTCATCGGAGACCGTGGTGCACGAGCAGCGGCTAAGCTGCTGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 90 bp | GGCTCAGACAGCTTGTTGCCACCAAGGTGCAGCACGGAGAGGCACTaGTTGGTCTCCAGGGCGTGGGCGATTGCTTGGCCACCCTCGTCC | + |
Preference number: 6 (lower is better) Translates to: GSDSLLPPRCSTERH*LVSRAWAIAWPPSS Trigger: GGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAAGCTGTCTGAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 90 bp | TCAGACAGCTTGTTGCCACCAAGGTGCAGCACGGAGAGGCACTTGTaGGTCTCCAGGGCGTGGGCGATTGCTTGGCCACCCTCGTCCTCG | + |
Preference number: 6 (lower is better) Translates to: SDSLLPPRCSTERHL*VSRAWAIAWPPSSS Trigger: CGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAAGCTGTCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 90 bp | GAGAAGTGGCCAGGATTCAGGGTCCGCTGGCGGGCAGCCTCTCGGTaGGCATGCAGAACCTGGCCAATGAGGTACTCGCTCTCCTGGGAT | + |
Preference number: 6 (lower is better) Translates to: EKWPGFRVRWRAASR*ACRTWPMRYSLSWD Trigger: ATCCCAGGAGAGCGAGTACCTCATTGGCCAGGTTCTGCATGCCAACCGAGAGGCTGCCCGCCAGCGGACCCTGAATCCTGGCCACTTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS GCA 72 bp | TCTCCAGGTGTCTCTCGAAGAACATACGCTTCCAGCTaGCGCCGTGCCTGGACACGTGGCACACGGACCAGC | + |
Preference number: 6 (lower is better) Translates to: SPGVSRRTYASS*RRAWTRGTRTS Trigger: GCTGGTCCGTGTGCCACGTGTCCAGGCACGGCGGCAGCTGGAAGCGTATGTTCTTCGAGAGACACCTGGAGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS GCA 72 bp | GCATCCGCACAGGTGGGAGGAACTGGTCCACATGAATaGGGCGCACGTAGTTCCTGCAGAGGGGCAGCAGGT | + |
Preference number: 6 (lower is better) Translates to: ASAQVGGTGPHE*GARSSCRGAAG Trigger: ACCTGCTGCCCCTCTGCAGGAACTACGTGCGCCGCATTCATGTGGACCAGTTCCTCCCACCTGTGCGGATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS GCA 72 bp | CACTCTCAGGCGACTGTGGCTCAGCAGCTTAGCCGCTaGTCGTGCACCACGGTCTCCGATGAGGTTGTGGGA | + |
Preference number: 6 (lower is better) Translates to: HSQATVAQQLSR*SCTTVSDEVVG Trigger: TCCCACAACCTCATCGGAGACCGTGGTGCACGAGCAGCGGCTAAGCTGCTGAGCCACAGTCGCCTGAGAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS GCA 72 bp | GGAGAGGCACTTGTTGGTCTCCAGGGCGTGGGCGATTaGTTGGCCACCCTCGTCCTCGATACAGTTGAGGCG | + |
Preference number: 6 (lower is better) Translates to: GEALVGLQGVGD*LATLVLDTVEA Trigger: CGCCTCAACTGTATCGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS GCA 72 bp | GTGGCTGTGGGCTCAGACAGCTTGTTGCCACCAAGGTaGAGCACGGAGAGGCACTTGTTGGTCTCCAGGGCG | + |
Preference number: 6 (lower is better) Translates to: VAVGSDSLLPPR*STERHLLVSRA Trigger: CGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAAGCTGTCTGAGCCCACAGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CCA 72 bp | GCGACGGACATTTGGGACCTTGGTCTTCAGCTGGCCTaGGGTAGGGGTGCTGCTGGTCTTCAAGGACGTGGG | + |
Preference number: 6 (lower is better) Translates to: ATDIWDLGLQLA*GRGAAGLQGRG Trigger: CCCACGTCCTTGAAGACCAGCAGCACCCCTACCCCAGGCCAGCTGAAGACCAAGGTCCCAAATGTCCGTCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CCA 72 bp | AGGCACTTGTTGGTCTCCAGGGCGTGGGCGATTGCTTaGCCACCCTCGTCCTCGATACAGTTGAGGCGGAGG | + |
Preference number: 6 (lower is better) Translates to: RHLLVSRAWAIA*PPSSSIQLRRR Trigger: CCTCCGCCTCAACTGTATCGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CCA 72 bp | TGCAGCACGGAGAGGCACTTGTTGGTCTCCAGGGCGTaGGCGATTGCTTGGCCACCCTCGTCCTCGATACAG | + |
Preference number: 6 (lower is better) Translates to: CSTERHLLVSRA*AIAWPPSSSIQ Trigger: CTGTATCGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CCA 72 bp | TGTTGCCACCAAGGTGCAGCACGGAGAGGCACTTGTTaGTCTCCAGGGCGTGGGCGATTGCTTGGCCACCCT | + |
Preference number: 6 (lower is better) Translates to: CCHQGAARRGTC*SPGRGRLLGHP Trigger: AGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 72 bp | GAGGCACTTGTTGGTCTCCAGGGCGTGGGCGATTGCTaGGCCACCCTCGTCCTCGATACAGTTGAGGCGGAG | + |
Preference number: 6 (lower is better) Translates to: EALVGLQGVGDC*ATLVLDTVEAE Trigger: CTCCGCCTCAACTGTATCGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 72 bp | TTGTTGCCACCAAGGTGCAGCACGGAGAGGCACTTGTaGGTCTCCAGGGCGTGGGCGATTGCTTGGCCACCC | + |
Preference number: 6 (lower is better) Translates to: LLPPRCSTERHL*VSRAWAIAWPP Trigger: GGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 90 bp | CAGCACGGAGAGGCACTTGTTGGTCTCCAGGGCGTGGGCGATTGCTaGGCCACCCTCGTCCTCGATACAGTTGAGGCGGAGGTTGAGGAA | + |
Preference number: 6 (lower is better) Translates to: QHGEALVGLQGVGDC*ATLVLDTVEAEVEE Trigger: TTCCTCAACCTCCGCCTCAACTGTATCGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS TCA 72 bp | TGGAGCTGCCCAAGGCAGAGACCTGGCGCTGGATGGTaGGAACCGACTGGCTGTGAGACGAAGAGTTGGACG | + |
Preference number: 6 (lower is better) Translates to: WSCPRQRPGAGW*EPTGCETKSWT Trigger: CGTCCAACTCTTCGTCTCACAGCCAGTCGGTTCTCACCATCCAGCGCCAGGTCTCTGCCTTGGGCAGCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS TCA 72 bp | CGCCGTGCCTGGACACGTGGCACACGGACCAGCGCTTaGTGCAGCAGCGGTGCCAGTAATTCTCATCGTCAA | + |
Preference number: 6 (lower is better) Translates to: RRAWTRGTRTSA*CSSGASNSHRQ Trigger: TTGACGATGAGAATTACTGGCACCGCTGCTGCATCAAGCGCTGGTCCGTGTGCCACGTGTCCAGGCACGGCG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS GCA 72 bp | TGTCTCTCGAAGAACATACGCTTCCAGCTGCCGCCGTaGCTGGACACGTGGCACACGGACCAGCGCTTGATG | + |
Preference number: 6 (lower is better) Translates to: CLSKNIRFQLPP*LDTWHTDQRLM Trigger: CATCAAGCGCTGGTCCGTGTGCCACGTGTCCAGGCACGGCGGCAGCTGGAAGCGTATGTTCTTCGAGAGACA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS GCA 72 bp | GGAACTGGTCCACATGAATGCGGCGCACGTAGTTCCTaGAGAGGGGCAGCAGGTCCAGGATCACGTTGGGGT | + |
Preference number: 6 (lower is better) Translates to: GTGPHECGARSS*RGAAGPGSRWG Trigger: ACCCCAACGTGATCCTGGACCTGCTGCCCCTCTGCAGGAACTACGTGCGCCGCATTCATGTGGACCAGTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS GCA 72 bp | CCAGGGCTGGGTGGTCCAGCAGGCTACGGATTAGGATaGGCGCCTTATCGTCGTCCACCTTACTTCGGGTCA | + |
Preference number: 6 (lower is better) Translates to: PGLGGPAGYGLG*APYRRPPYFGS Trigger: TGACCCGAAGTAAGGTGGACGACGATAAGGCGCGCATCCTAATCCGTAGCCTGCTGGACCACCCAGCCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS GCA 72 bp | GGGAGAGGAGTGTGGCTGTGGGCTCAGACAGCTTGTTaGCACCAAGGTGCAGCACGGAGAGGCACTTGTTGG | + |
Preference number: 6 (lower is better) Translates to: GRGVWLWAQTAC*HQGAARRGTCW Trigger: CCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAAGCTGTCTGAGCCCACAGCCACACTCCTCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CCA 72 bp | CGCATGCGACGGACATTTGGGACCTTGGTCTTCAGCTaGCCTGGGGTAGGGGTGCTGCTGGTCTTCAAGGAC | + |
Preference number: 6 (lower is better) Translates to: RMRRTFGTLVFS*PGVGVLLVFKD Trigger: GTCCTTGAAGACCAGCAGCACCCCTACCCCAGGCCAGCTGAAGACCAAGGTCCCAAATGTCCGTCGCATGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 72 bp | GAGATGATCCTGCGCATGCGACGGACATTTGGGACCTaGGTCTTCAGCTGGCCTGGGGTAGGGGTGCTGCTG | + |
Preference number: 6 (lower is better) Translates to: EMILRMRRTFGT*VFSWPGVGVLL Trigger: CAGCAGCACCCCTACCCCAGGCCAGCTGAAGACCAAGGTCCCAAATGTCCGTCGCATGCGCAGGATCATCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 90 bp | GCATCCTCGGAGATGATCCTGCGCATGCGACGGACATTTGGGACCTaGGTCTTCAGCTGGCCTGGGGTAGGGGTGCTGCTGGTCTTCAAG | + |
Preference number: 6 (lower is better) Translates to: ASSEMILRMRRTFGT*VFSWPGVGVLLVFK Trigger: CTTGAAGACCAGCAGCACCCCTACCCCAGGCCAGCTGAAGACCAAGGTCCCAAATGTCCGTCGCATGCGCAGGATCATCTCCGAGGATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 90 bp | TCCAGGGCGTGGGCGATTGCTTGGCCACCCTCGTCCTCGATACAGTaGAGGCGGAGGTTGAGGAAGACCAGGTTGGTGTTGTGTGCCAGT | + |
Preference number: 6 (lower is better) Translates to: SRAWAIAWPPSSSIQ*RRRLRKTRLVLCAS Trigger: ACTGGCACACAACACCAACCTGGTCTTCCTCAACCTCCGCCTCAACTGTATCGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 90 bp | GTGAGCATCTGGGAGAGGAGTGTGGCTGTGGGCTCAGACAGCTTGTaGCCACCAAGGTGCAGCACGGAGAGGCACTTGTTGGTCTCCAGG | + |
Preference number: 6 (lower is better) Translates to: VSIWERSVAVGSDSL*PPRCSTERHLLVSR Trigger: CCTGGAGACCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAAGCTGTCTGAGCCCACAGCCACACTCCTCTCCCAGATGCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS TCA 72 bp | GGTCCAGGATCACGTTGGGGTCCGTGGTCCCCGGGATaGATAGCTTCAGCAGGTTCTCCAGGTGTCTCTCGA | + |
Preference number: 6 (lower is better) Translates to: GPGSRWGPWSPG*IASAGSPGVSR Trigger: TCGAGAGACACCTGGAGAACCTGCTGAAGCTATTCATCCCGGGGACCACGGACCCCAACGTGATCCTGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CCA 72 bp | ATCCTCGGAGATGATCCTGCGCATGCGACGGACATTTaGGACCTTGGTCTTCAGCTGGCCTGGGGTAGGGGT | + |
Preference number: 6 (lower is better) Translates to: ILGDDPAHATDI*DLGLQLAWGRG Trigger: ACCCCTACCCCAGGCCAGCTGAAGACCAAGGTCCCAAATGTCCGTCGCATGCGCAGGATCATCTCCGAGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 72 bp | TGGCCACCCTCGTCCTCGATACAGTTGAGGCGGAGGTaGAGGAAGACCAGGTTGGTGTTGTGTGCCAGTGCG | + |
Preference number: 6 (lower is better) Translates to: WPPSSSIQLRRR*RKTRLVLCASA Trigger: CGCACTGGCACACAACACCAACCTGGTCTTCCTCAACCTCCGCCTCAACTGTATCGAGGACGAGGGTGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 72 bp | ATCTGGGAGAGGAGTGTGGCTGTGGGCTCAGACAGCTaGTTGCCACCAAGGTGCAGCACGGAGAGGCACTTG | + |
Preference number: 6 (lower is better) Translates to: IWERSVAVGSDS*LPPRCSTERHL Trigger: CAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAAGCTGTCTGAGCCCACAGCCACACTCCTCTCCCAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 90 bp | ACAGTGAGCATCTGGGAGAGGAGTGTGGCTGTGGGCTCAGACAGCTaGTTGCCACCAAGGTGCAGCACGGAGAGGCACTTGTTGGTCTCC | + |
Preference number: 6 (lower is better) Translates to: TVSIWERSVAVGSDS*LPPRCSTERHLLVS Trigger: GGAGACCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAAGCTGTCTGAGCCCACAGCCACACTCCTCTCCCAGATGCTCACTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS TCA 72 bp | GTACGATGGCCAGTGACCACTCTGCATCCTCGGAGATaGTCCTGCGCATGCGACGGACATTTGGGACCTTGG | + |
Preference number: 6 (lower is better) Translates to: VRWPVTTLHPRR*SCACDGHLGPW Trigger: CCAAGGTCCCAAATGTCCGTCGCATGCGCAGGATCATCTCCGAGGATGCAGAGTGGTCACTGGCCATCGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS TCA 72 bp | GGGCAGCCTCTCGGTTGGCATGCAGAACCTGGCCAATaGGGTACTCGCTCTCCTGGGATACATCTGACAGTC | + |
Preference number: 6 (lower is better) Translates to: GQPLGWHAEPGQ*GTRSPGIHLTV Trigger: GACTGTCAGATGTATCCCAGGAGAGCGAGTACCTCATTGGCCAGGTTCTGCATGCCAACCGAGAGGCTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 72 bp | TGGGCGATTGCTTGGCCACCCTCGTCCTCGATACAGTaGAGGCGGAGGTTGAGGAAGACCAGGTTGGTGTTG | + |
Preference number: 6 (lower is better) Translates to: WAIAWPPSSSIQ*RRRLRKTRLVL Trigger: CAACACCAACCTGGTCTTCCTCAACCTCCGCCTCAACTGTATCGAGGACGAGGGTGGCCAAGCAATCGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 90 bp | TGCCCAATGTGGTTGCAGGATAGGTTGAGGCTGACGAGCGTAGTGTaGACAGTGAGCATCTGGGAGAGGAGTGTGGCTGTGGGCTCAGAC | + |
Preference number: 6 (lower is better) Translates to: CPMWLQDRLRLTSVV*TVSIWERSVAVGSD Trigger: GTCTGAGCCCACAGCCACACTCCTCTCCCAGATGCTCACTGTCAACACTACGCTCGTCAGCCTCAACCTATCCTGCAACCACATTGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CCA 72 bp | GAATTCTCAGTACAGTTGTTAGTGGGTGAGGAGAAGTaGCCAGGATTCAGGGTCCGCTGGCGGGCAGCCTCT | + |
Preference number: 6 (lower is better) Translates to: EFSVQLLVGEEK*PGFRVRWRAAS Trigger: AGAGGCTGCCCGCCAGCGGACCCTGAATCCTGGCCACTTCTCCTCACCCACTAACAACTGTACTGAGAATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 90 bp | AGGAGTTGCTTCCCACCATCCTGCCCAATGTGGTTGCAGGATAGGTaGAGGCTGACGAGCGTAGTGTTGACAGTGAGCATCTGGGAGAGG | + |
Preference number: 6 (lower is better) Translates to: RSCFPPSCPMWLQDR*RLTSVVLTVSIWER Trigger: CCTCTCCCAGATGCTCACTGTCAACACTACGCTCGTCAGCCTCAACCTATCCTGCAACCACATTGGGCAGGATGGTGGGAAGCAACTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 72 bp | TGGTTGCAGGATAGGTTGAGGCTGACGAGCGTAGTGTaGACAGTGAGCATCTGGGAGAGGAGTGTGGCTGTG | + |
Preference number: 6 (lower is better) Translates to: WLQDRLRLTSVV*TVSIWERSVAV Trigger: CACAGCCACACTCCTCTCCCAGATGCTCACTGTCAACACTACGCTCGTCAGCCTCAACCTATCCTGCAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 72 bp | TCCAGGAGTTGCTTCCCACCATCCTGCCCAATGTGGTaGCAGGATAGGTTGAGGCTGACGAGCGTAGTGTTG | + |
Preference number: 6 (lower is better) Translates to: SRSCFPPSCPMW*QDRLRLTSVVL Trigger: CAACACTACGCTCGTCAGCCTCAACCTATCCTGCAACCACATTGGGCAGGATGGTGGGAAGCAACTCCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 90 bp | GATATGCCTTCCAGGAGTTGCTTCCCACCATCCTGCCCAATGTGGTaGCAGGATAGGTTGAGGCTGACGAGCGTAGTGTTGACAGTGAGC | + |
Preference number: 6 (lower is better) Translates to: DMPSRSCFPPSCPMW*QDRLRLTSVVLTVS Trigger: GCTCACTGTCAACACTACGCTCGTCAGCCTCAACCTATCCTGCAACCACATTGGGCAGGATGGTGGGAAGCAACTCCTGGAAGGCATATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CCA 72 bp | GCATGCAGAACCTGGCCAATGAGGTACTCGCTCTCCTaGGATACATCTGACAGTCGCAGGTCGAACTCTAGA | + |
Preference number: 6 (lower is better) Translates to: ACRTWPMRYSLS*DTSDSRRSNSR Trigger: TCTAGAGTTCGACCTGCGACTGTCAGATGTATCCCAGGAGAGCGAGTACCTCATTGGCCAGGTTCTGCATGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 72 bp | CGCGCCTTATCGTCGTCCACCTTACTTCGGGTCAGCTaGAAGATCTTGAGGGTGTGGCAAGCTTTGATGGTG | + |
Preference number: 6 (lower is better) Translates to: RALSSSTLLRVS*KILRVWQALMV Trigger: CACCATCAAAGCTTGCCACACCCTCAAGATCTTCAAGCTGACCCGAAGTAAGGTGGACGACGATAAGGCGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 72 bp | TTCCCACCATCCTGCCCAATGTGGTTGCAGGATAGGTaGAGGCTGACGAGCGTAGTGTTGACAGTGAGCATC | + |
Preference number: 6 (lower is better) Translates to: FPPSCPMWLQDR*RLTSVVLTVSI Trigger: GATGCTCACTGTCAACACTACGCTCGTCAGCCTCAACCTATCCTGCAACCACATTGGGCAGGATGGTGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS TCA 72 bp | AATGCAGAGTTCTGTAAGGAGAGGTACGATGGCCAGTaGCCACTCTGCATCCTCGGAGATGATCCTGCGCAT | + |
Preference number: 6 (lower is better) Translates to: NAEFCKERYDGQ*PLCILGDDPAH Trigger: ATGCGCAGGATCATCTCCGAGGATGCAGAGTGGTCACTGGCCATCGTACCTCTCCTTACAGAACTCTGCATT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 90 bp | TGGGATACATCTGACAGTCGCAGGTCGAACTCTAGAATGGTCTTGTaGTCTGATATGCCTTCCAGGAGTTGCTTCCCACCATCCTGCCCA | + |
Preference number: 6 (lower is better) Translates to: WDTSDSRRSNSRMVL*SDMPSRSCFPPSCP Trigger: TGGGCAGGATGGTGGGAAGCAACTCCTGGAAGGCATATCAGACAACAAGACCATTCTAGAGTTCGACCTGCGACTGTCAGATGTATCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 90 bp | TCCTGGGATACATCTGACAGTCGCAGGTCGAACTCTAGAATGGTCTaGTTGTCTGATATGCCTTCCAGGAGTTGCTTCCCACCATCCTGC | + |
Preference number: 6 (lower is better) Translates to: SWDTSDSRRSNSRMV*LSDMPSRSCFPPSC Trigger: GCAGGATGGTGGGAAGCAACTCCTGGAAGGCATATCAGACAACAAGACCATTCTAGAGTTCGACCTGCGACTGTCAGATGTATCCCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS GCA 72 bp | GAAGATCTTGAGGGTGTGGCAAGCTTTGATGGTGGCTaGCAGAGAGTAGCAGTCTCGGTAGGTGAAGAGAAA | + |
Preference number: 6 (lower is better) Translates to: EDLEGVASFDGG*QRVAVSVGEEK Trigger: TTTCTCTTCACCTACCGAGACTGCTACTCTCTGGCAGCCACCATCAAAGCTTGCCACACCCTCAAGATCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS GCA 72 bp | GCAGGTCGAACTCTAGAATGGTCTTGTTGTCTGATATaGCTTCCAGGAGTTGCTTCCCACCATCCTGCCCAA | + |
Preference number: 6 (lower is better) Translates to: AGRTLEWSCCLI*LPGVASHHPAQ Trigger: TTGGGCAGGATGGTGGGAAGCAACTCCTGGAAGGCATATCAGACAACAAGACCATTCTAGAGTTCGACCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS GCA 72 bp | TTGCTCAAGACCTTCTTTTGGTGCTCTAGCGGCAGCTaGTTCAGGATAGGGTTGTTCTGGAAGTTCTTGACG | + |
Preference number: 6 (lower is better) Translates to: LLKTFFWCSSGS*FRIGLFWKFLT Trigger: CGTCAAGAACTTCCAGAACAACCCTATCCTGAAGCAGCTGCCGCTAGAGCACCAAAAGAAGGTCTTGAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 72 bp | TCTGACAGTCGCAGGTCGAACTCTAGAATGGTCTTGTaGTCTGATATGCCTTCCAGGAGTTGCTTCCCACCA | + |
Preference number: 6 (lower is better) Translates to: SDSRRSNSRMVL*SDMPSRSCFPP Trigger: TGGTGGGAAGCAACTCCTGGAAGGCATATCAGACAACAAGACCATTCTAGAGTTCGACCTGCGACTGTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CCA 72 bp | GGGATACATCTGACAGTCGCAGGTCGAACTCTAGAATaGTCTTGTTGTCTGATATGCCTTCCAGGAGTTGCT | + |
Preference number: 6 (lower is better) Translates to: GIHLTVAGRTLE*SCCLICLPGVA Trigger: AGCAACTCCTGGAAGGCATATCAGACAACAAGACCATTCTAGAGTTCGACCTGCGACTGTCAGATGTATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 72 bp | ACATCTGACAGTCGCAGGTCGAACTCTAGAATGGTCTaGTTGTCTGATATGCCTTCCAGGAGTTGCTTCCCA | + |
Preference number: 6 (lower is better) Translates to: TSDSRRSNSRMV*LSDMPSRSCFP Trigger: TGGGAAGCAACTCCTGGAAGGCATATCAGACAACAAGACCATTCTAGAGTTCGACCTGCGACTGTCAGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS TCA 72 bp | AGGATAGGGTTGTTCTGGAAGTTCTTGACGATATGTTaGATGCAGAGTTCTGTAAGGAGAGGTACGATGGCC | + |
Preference number: 6 (lower is better) Translates to: RIGLFWKFLTIC*MQSSVRRGTMA Trigger: GGCCATCGTACCTCTCCTTACAGAACTCTGCATTCAACATATCGTCAAGAACTTCCAGAACAACCCTATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |
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CDS CAA 72 bp | CAGGATAGGGTTGTTCTGGAAGTTCTTGACGATATGTaGAATGCAGAGTTCTGTAAGGAGAGGTACGATGGC | + |
Preference number: 6 (lower is better) Translates to: QDRVVLEVLDDM*NAEFCKERYDG Trigger: GCCATCGTACCTCTCCTTACAGAACTCTGCATTCAACATATCGTCAAGAACTTCCAGAACAACCCTATCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113547.2 ENSMUST00000233588.2 |