RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TCTE1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000023949

Ensembl transcript IDs: ENSMUST00000113547.2, ENSMUST00000233588.2

Found 245 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTGCCCCCGACAGGCACACACACAGTCACTCCCAAGCCCCCTCTaGTGCTCTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGT +
Preference number: 1 (lower is better)
Translates to: GCPRQAHTQSLPSPL*CSTQRLLLAKSPWS
Trigger: ACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAGAGCACCAGAGGGGGCTTGGGAGTGACTGTGTGTGTGCCTGTCGGGGGCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR TCA 90 bp CTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCTTTaGGGTAGACGGGCACTGGGTCACTCAGCCCGAGGAGAGTTGGGA +
Preference number: 1 (lower is better)
Translates to: LECRPSWIAAAVAHL*GRRALGHSARGELG
Trigger: TCCCAACTCTCCTCGGGCTGAGTGACCCAGTGCCCGTCTACCTCAAAGATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR GCA 90 bp TGCCCCCGACAGGCACACACACAGTCACTCCCAAGCCCCCTCTGGTaGTCTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCA +
Preference number: 1 (lower is better)
Translates to: CPRQAHTQSLPSPLW*STQRLLLAKSPWSA
Trigger: TGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAGAGCACCAGAGGGGGCTTGGGAGTGACTGTGTGTGTGCCTGTCGGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR CCA 90 bp GGAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTaGGGTGGGCTAGGCCTGGCTCGGGAGAAGACAGGCCTCTGTCAA +
Preference number: 1 (lower is better)
Translates to: GEGTWKTVCPEDKGL*GGLGLAREKTGLCQ
Trigger: TTGACAGAGGCCTGTCTTCTCCCGAGCCAGGCCTAGCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR CCA 90 bp CCCCTCTGGTGCTCTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTaGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCTTT +
Preference number: 1 (lower is better)
Translates to: PLWCSTQRLLLAKSP*SAGPLGLQLQSPIF
Trigger: AAAGATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAGAGCACCAGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR GCA 90 bp TCTGTGATTCCTATGGGTGTGGCCCCATGGTGGGCAGTCACAGCGTaGCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTG +
Preference number: 1 (lower is better)
Translates to: SVIPMGVAPWWAVTA*QGLKERVPGRLYVL
Trigger: CAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCCCACCATGGGGCCACACCCATAGGAATCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR CCA 90 bp GGGTGGGCTAGGCCTGGCTCGGGAGAAGACAGGCCTCTGTCAAATTaGGTGCATCACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGC +
Preference number: 1 (lower is better)
Translates to: GWARPGSGEDRPLSN*VHHTVAFLSWNSKR
Trigger: GCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTGATGCACCCAATTTGACAGAGGCCTGTCTTCTCCCGAGCCAGGCCTAGCCCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR CCA 90 bp ATGGTGGGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTaGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCTA +
Preference number: 1 (lower is better)
Translates to: MVGSHSVPGTQGEGT*KTVCPEDKGLWGGL
Trigger: TAGCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCCCACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR GCA 90 bp GGGCTAGGCCTGGCTCGGGAGAAGACAGGCCTCTGTCAAATTGGGTaGATCACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAG +
Preference number: 1 (lower is better)
Translates to: GLGLAREKTGLCQIG*ITLWPFCHGIPSAK
Trigger: CTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTGATGCACCCAATTTGACAGAGGCCTGTCTTCTCCCGAGCCAGGCCTAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR TCA 90 bp GGGCACTGGGTCACTCAGCCCGAGGAGAGTTGGGAGATAAGAGTTTaGATTAGTCAGCCAAGATCCTCTCATGAATCCATAGTCTGTGAT +
Preference number: 1 (lower is better)
Translates to: GHWVTQPEESWEIRV*ISQPRSSHESIVCD
Trigger: ATCACAGACTATGGATTCATGAGAGGATCTTGGCTGACTAATTCAAACTCTTATCTCCCAACTCTCCTCGGGCTGAGTGACCCAGTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR CCA 90 bp GCTCGGGAGAAGACAGGCCTCTGTCAAATTGGGTGCATCACACTGTaGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATC +
Preference number: 1 (lower is better)
Translates to: AREKTGLCQIGCITL*PFCHGIPSAKIVQI
Trigger: GATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTGATGCACCCAATTTGACAGAGGCCTGTCTTCTCCCGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR TCA 90 bp TGTGCTCATGCATGTGTGTGTATGTGTGTGTGTGTGTGTGTAGACTaGGGTCAGGGCTCAGCTATCTGCTTAGTAAAAAGGGAAAGGGGT +
Preference number: 1 (lower is better)
Translates to: CAHACVCMCVCVCVD*GQGSAICLVKRERG
Trigger: ACCCCTTTCCCTTTTTACTAAGCAGATAGCTGAGCCCTGACCTCAGTCTACACACACACACACACACATACACACACATGCATGAGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR GCA 90 bp GGTGCTCATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTaGCTTCCCTGTTCCTGTTATGGGTCTAGTAATGGCCATTTTCTA +
Preference number: 1 (lower is better)
Translates to: GAHEEFEQGWSFRVL*LPCSCYGSSNGHFL
Trigger: TAGAAAATGGCCATTACTAGACCCATAACAGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCATGAGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR CCA 90 bp GGAGCTAGTGCACACATTTCATCCTTAGGTGCCCCTTCTGTACCTTaGCATCTTCATATATACAAATCTGGCTGCTCATTCCAAGGAGAT +
Preference number: 1 (lower is better)
Translates to: GASAHISSLGAPSVP*HLHIYKSGCSFQGD
Trigger: ATCTCCTTGGAATGAGCAGCCAGATTTGTATATATGAAGATGCCAAGGTACAGAAGGGGCACCTAAGGATGAAATGTGTGCACTAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR TCA 90 bp CATCTTCATATATACAAATCTGGCTGCTCATTCCAAGGAGATTCGTaGTCCCTTCTTCTCGATACCTCAGAACCAGGGGCAGACATATCA +
Preference number: 1 (lower is better)
Translates to: HLHIYKSGCSFQGDS*SLLLDTSEPGADIS
Trigger: TGATATGTCTGCCCCTGGTTCTGAGGTATCGAGAAGAAGGGATCACGAATCTCCTTGGAATGAGCAGCCAGATTTGTATATATGAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR TCA 90 bp CTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACACTaGTGGATAATAAAAGTGTGGATGACTCACTGGTCTGCTCCCTCA +
Preference number: 1 (lower is better)
Translates to: LSVMEFQAQRLYKSH*WIIKVWMTHWSAPS
Trigger: TGAGGGAGCAGACCAGTGAGTCATCCACACTTTTATTATCCATCAGTGTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR CCA 90 bp TTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCAGGTGTGGCCCCATGGTaGGCAGTCACAGCGTGCCAG +
Preference number: 2 (lower is better)
Translates to: LQRVPGVQALLDCSCSRPGVAPW*AVTACQ
Trigger: CTGGCACGCTGTGACTGCCCACCATGGGGCCACACC...TGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR CAA 90 bp CGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATaGCAGCTGCAGTCGCCCATCTTTGAGGTAGACGGGCACTGGGTC +
Preference number: 2 (lower is better)
Translates to: RLLLAKSPWSAGPLG*QLQSPIFEVDGHWV
Trigger: GACCCAGTGCCCGTCTACCTCAAAGATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR GCA 90 bp TTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATGGGCAGTCACAGCGTaGCAGGGACTCAAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: LQRVPGVQALLDCSCSRPWAVTA*QGLKER
Trigger: CCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCCCA...TGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR CCA 90 bp CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATGAGGTAGACGGGCACTaGGTCACTCAGCCCGAGGAG +
Preference number: 2 (lower is better)
Translates to: LLSACFLQRVPGVQALLDEVDGH*VTQPEE
Trigger: CTCCTCGGGCTGAGTGACCCAGTGCCCGTCTACCTC...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR CAA 90 bp CAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTaGTGGGGTGGGCTAGGCCTGGCTCGGGAGAAGACAGGCCTCTGT +
Preference number: 2 (lower is better)
Translates to: QGEGTWKTVCPEDKG*WGGLGLAREKTGLC
Trigger: ACAGAGGCCTGTCTTCTCCCGAGCCAGGCCTAGCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR CCA 90 bp GGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTAGGCCTCTGTCAAATTaGGTGCATCACACTGTGGCC +
Preference number: 2 (lower is better)
Translates to: GSHSVPGTQGEGTWKTVCRPLSN*VHHTVA
Trigger: GGCCACAGTGTGATGCACCCAATTTGACAGAGGCCT...ACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR GCA 90 bp GGGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGCATTTCATCCTTAGGTaGCCCTTCTGTACCTTGGCA +
Preference number: 2 (lower is better)
Translates to: GQSQRARDSRRGYLEDCMHFILR*PFCTLA
Trigger: TGCCAAGGTACAGAAGGGGCACCTAAGGATGAAATG...CATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR TCA 90 bp GAACCTCTGCTAGCAGCTGTGGCTACACACACACACACACACACACACACACACATCAAGGGTGTGAAATaGAGGTGTGGTTGCCGGGGT +
Preference number: 2 (lower is better)
Translates to: EPLLAAVATHTHTHTHTHIKGVK*RCGCRG
Trigger: ACCCCGGCAACCACACCTTCATTTCACACCCTTGAT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCCACAGCTGCTAGCAGAGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR TCA 90 bp ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGGTCTGCTCCCTCAGTaGCACTTGTTCCCCATCCTT +
Preference number: 2 (lower is better)
Translates to: THTHTPSHLHVCTLELSEGLLPQ*HLFPIL
Trigger: AAGGATGGGGAACAAGTGTCACTGAGGGAGCAGACC...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR GCA 90 bp GCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCTCTTTTAGAGTCCTTTaGCTTCCCTGTTCCTGTTAT +
Preference number: 2 (lower is better)
Translates to: AKSPWSAGPLGLQLQSPISFRVL*LPCSCY
Trigger: ATAACAGGAACAGGGAAGGCAAAGGACTCTAAAAGA...GATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR GCA 90 bp GTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGATGACTCACTGGTCTaGTCCCTCAGTGACACTTGT +
Preference number: 2 (lower is better)
Translates to: VPGTQGEGTWKTVCPEDKDDSLV*SLSDTC
Trigger: ACAAGTGTCACTGAGGGAGCAGACCAGTGAGTCATC...CTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR CCA 90 bp GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCGAGTTTGAGCAGGGATaGTCTTTTAGAGTCCTTTGC +
Preference number: 2 (lower is better)
Translates to: ERVPGRLYVLRIRACGVGEFEQG*SFRVLC
Trigger: GCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTC...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR CCA 90 bp CACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGGAGTTTGAGCAGGGATaGTCTTTTAGAGTCCTTTGC +
Preference number: 2 (lower is better)
Translates to: HSVPGTQGEGTWKTVCPEEFEQG*SFRVLC
Trigger: GCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTC...CTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR GCA 90 bp GAACCTCTGCTAGCAGCTGTGGCTACACACACACACACACACACACACACACACCATTTCATCCTTAGGTaGCCCTTCTGTACCTTGGCA +
Preference number: 2 (lower is better)
Translates to: EPLLAAVATHTHTHTHTHHFILR*PFCTLA
Trigger: TGCCAAGGTACAGAAGGGGCACCTAAGGATGAAATG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCCACAGCTGCTAGCAGAGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR GCA 90 bp TTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCTTTTAGAGTCCTTTaGCTTCCCTGTTCCTGTTAT +
Preference number: 2 (lower is better)
Translates to: LQRVPGVQALLDCSCSRPSFRVL*LPCSCY
Trigger: ATAACAGGAACAGGGAAGGCAAAGGACTCTAAAAGA...TGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR CCA 90 bp GTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGGTGCATCACACTGTaGCCTTTCTGTCATGGAATT +
Preference number: 2 (lower is better)
Translates to: VPGTQGEGTWKTVCPEDKGCITL*PFCHGI
Trigger: AATTCCATGACAGAAAGGCCACAGTGTGATGCACCC...CTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR CCA 90 bp CACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGGCCCCTTCTGTACCTTaGCATCTTCATATATACAAA +
Preference number: 2 (lower is better)
Translates to: HSVPGTQGEGTWKTVCPEAPSVP*HLHIYK
Trigger: TTTGTATATATGAAGATGCCAAGGTACAGAAGGGGC...CTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR CCA 90 bp TTTACACTGAATGTTCTTGTTTCTCTAATTAGAACCTCTGCTAGCAGCTGTGGCCATCTCCAGGGAGGGTaGGAGGGTGAGGGAGACAGG +
Preference number: 2 (lower is better)
Translates to: FTLNVLVSLIRTSASSCGHLQGG*EGEGDR
Trigger: CCTGTCTCCCTCACCCTCCCACCCTCCCTGGAGATG...GCCACAGCTGCTAGCAGAGGTTCTAATTAGAGAAACAAGAACATTCAGTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR TCA 90 bp ATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTATCAAGGGTGTGAAATaGAGGTGTGGTTGCCGGGGT +
Preference number: 2 (lower is better)
Translates to: MKSLSRDGLLESFAFPVPIKGVK*RCGCRG
Trigger: ACCCCGGCAACCACACCTTCATTTCACACCCTTGAT...AGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR TCA 90 bp ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGACATATCAAGGGTGTaGAATGAAGGTGTGGTTGCC +
Preference number: 2 (lower is better)
Translates to: THTHTPSHLHVCTLELSEDISRV*NEGVVA
Trigger: GGCAACCACACCTTCATTTCACACCCTTGATATGTC...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR GCA 90 bp ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGCTCTGTCAAATTGGGTaGATCACACTGTGGCCTTTC +
Preference number: 2 (lower is better)
Translates to: THTHTPSHLHVCTLELSELCQIG*ITLWPF
Trigger: GAAAGGCCACAGTGTGATGCACCCAATTTGACAGAG...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR GCA 90 bp TTTACACTGAATGTTCTTGTTTCTCTAATTAGAACCTCTGCTAGCAGCTGTGGCCAGAGGACTCTAGGCTaGCCCCGACAGGCACACACA +
Preference number: 2 (lower is better)
Translates to: FTLNVLVSLIRTSASSCGQRTLG*PRQAHT
Trigger: TGTGTGTGCCTGTCGGGGGCAGCCTAGAGTCCTCTG...GCCACAGCTGCTAGCAGAGGTTCTAATTAGAGAAACAAGAACATTCAGTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR CCA 90 bp TTTACACTGAATGTTCTTGTTTCTCTAATTAGAACCTCTGCTAGCAGCTGTGGCAGGCCTCTGTCAAATTaGGTGCATCACACTGTGGCC +
Preference number: 2 (lower is better)
Translates to: FTLNVLVSLIRTSASSCGRPLSN*VHHTVA
Trigger: GGCCACAGTGTGATGCACCCAATTTGACAGAGGCCT...GCCACAGCTGCTAGCAGAGGTTCTAATTAGAGAAACAAGAACATTCAGTGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR CCA 90 bp GTGTGTGTGTGTAGACTGAGGTCAGGGCTCAGCTATCTGCTTAGTAAAAAGGGAGCCCCTTCTGTACCTTaGCATCTTCATATATACAAA +
Preference number: 2 (lower is better)
Translates to: VCVCRLRSGLSYLLSKKGAPSVP*HLHIYK
Trigger: TTTGTATATATGAAGATGCCAAGGTACAGAAGGGGC...TCCCTTTTTACTAAGCAGATAGCTGAGCCCTGACCTCAGTCTACACACACACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR TCA 90 bp TTTACACTGAATGTTCTTGTTTCTCTAATTAGAACCTCTGCTAGCAGCTGTGGCGACATATCAAGGGTGTaGAATGAAGGTGTGGTTGCC +
Preference number: 2 (lower is better)
Translates to: FTLNVLVSLIRTSASSCGDISRV*NEGVVA
Trigger: GGCAACCACACCTTCATTTCACACCCTTGATATGTC...GCCACAGCTGCTAGCAGAGGTTCTAATTAGAGAAACAAGAACATTCAGTGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR CAA 90 bp TTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCACAGGCCTCTGTCAAATaGGGTGCATCACACTGTGGC +
Preference number: 3 (lower is better)
Translates to: LQRVPGVQALLDCSCSRPQASVK*GASHCG
Trigger: GCCACAGTGTGATGCACCCAATTTGACAGAGGCCTG...TGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR CAA 90 bp CACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGGTGTCAGGCCTGAGGATAAGGGCTaGTGGGGTGGGCTAGGCCTG +
Preference number: 3 (lower is better)
Translates to: HTPSHLHVCTLELSEGVRPEDKG*WGGLGL
Trigger: CAGGCCTAGCCCACCCCACAAGCCCTTATCCTCAGG...CCTGACACCCTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR GCA 72 bp TACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTaGAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCAT +
Preference number: 3 (lower is better)
Translates to: YSAPASCKESLE*RPSWIAAAVAH
Trigger: ATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR CCA 72 bp CAGCTGCAGTCGCCCATCTTTGAGGTAGACGGGCACTaGGTCACTCAGCCCGAGGAGAGTTGGGAGATAAGA +
Preference number: 3 (lower is better)
Translates to: QLQSPIFEVDGH*VTQPEESWEIR
Trigger: TCTTATCTCCCAACTCTCCTCGGGCTGAGTGACCCAGTGCCCGTCTACCTCAAAGATGGGCGACTGCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR CCA 72 bp TGCTCTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTaGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCG +
Preference number: 3 (lower is better)
Translates to: CSTQRLLLAKSP*SAGPLGLQLQS
Trigger: CGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR CCA 72 bp AGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTaGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGG +
Preference number: 3 (lower is better)
Translates to: SHSVPGTQGEGT*KTVCPEDKGLW
Trigger: CCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR CCA 72 bp AGGCCTGGCTCGGGAGAAGACAGGCCTCTGTCAAATTaGGTGCATCACACTGTGGCCTTTCTGTCATGGAAT +
Preference number: 3 (lower is better)
Translates to: RPGSGEDRPLSN*VHHTVAFLSWN
Trigger: ATTCCATGACAGAAAGGCCACAGTGTGATGCACCCAATTTGACAGAGGCCTGTCTTCTCCCGAGCCAGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR CAA 90 bp ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGCTCAGCGCCTGCTTCTaGCAAAGAGTCCCTGGAGTG +
Preference number: 3 (lower is better)
Translates to: THTHTPSHLHVCTLELSELSACF*QRVPGV
Trigger: CACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAG...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR TCA 72 bp CTCAGAACCAGGGGCAGACATATCAAGGGTGTGAAATaGAGGTGTGGTTGCCGGGGTAACCCATCAGATCAC +
Preference number: 3 (lower is better)
Translates to: LRTRGRHIKGVK*RCGCRGNPSDH
Trigger: GTGATCTGATGGGTTACCCCGGCAACCACACCTTCATTTCACACCCTTGATATGTCTGCCCCTGGTTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR GCA 72 bp CTGGCTCGGGAGAAGACAGGCCTCTGTCAAATTGGGTaGATCACACTGTGGCCTTTCTGTCATGGAATTCCA +
Preference number: 3 (lower is better)
Translates to: LAREKTGLCQIG*ITLWPFCHGIP
Trigger: TGGAATTCCATGACAGAAAGGCCACAGTGTGATGCACCCAATTTGACAGAGGCCTGTCTTCTCCCGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR CAA 90 bp GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCGTGCTCATGAAGAGTTaGAGCAGGGATGGTCTTTTA +
Preference number: 3 (lower is better)
Translates to: ERVPGRLYVLRIRACGVGVLMKS*SRDGLL
Trigger: TAAAAGACCATCCCTGCTCAAACTCTTCATGAGCAC...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR CAA 90 bp ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGCAGGCCTCTGTCAAATaGGGTGCATCACACTGTGGC +
Preference number: 3 (lower is better)
Translates to: THTHTPSHLHVCTLELSEQASVK*GASHCG
Trigger: GCCACAGTGTGATGCACCCAATTTGACAGAGGCCTG...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR CCA 72 bp GAGGTAGATGGTGCTCATGAAGAGTTTGAGCAGGGATaGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTGT +
Preference number: 3 (lower is better)
Translates to: EVDGAHEEFEQG*SFRVLCLPCSC
Trigger: ACAGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCATGAGCACCATCTACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR-3UTR CAA 90 bp ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGTGCTCATGAAGAGTTaGAGCAGGGATGGTCTTTTA +
Preference number: 3 (lower is better)
Translates to: THTHTPSHLHVCTLELSEVLMKS*SRDGLL
Trigger: TAAAAGACCATCCCTGCTCAAACTCTTCATGAGCAC...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR GCA 72 bp GAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTaGCTTCCCTGTTCCTGTTATGGGTCTAGTAATGGC +
Preference number: 3 (lower is better)
Translates to: EEFEQGWSFRVL*LPCSCYGSSNG
Trigger: GCCATTACTAGACCCATAACAGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR CCA 72 bp AAGACAGGCCTCTGTCAAATTGGGTGCATCACACTGTaGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATT +
Preference number: 3 (lower is better)
Translates to: KTGLCQIGCITL*PFCHGIPSAKI
Trigger: AATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTGATGCACCCAATTTGACAGAGGCCTGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR TCA 72 bp GTCACTCAGCCCGAGGAGAGTTGGGAGATAAGAGTTTaGATTAGTCAGCCAAGATCCTCTCATGAATCCATA +
Preference number: 3 (lower is better)
Translates to: VTQPEESWEIRV*ISQPRSSHESI
Trigger: TATGGATTCATGAGAGGATCTTGGCTGACTAATTCAAACTCTTATCTCCCAACTCTCCTCGGGCTGAGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR CCA 72 bp CCCTTCTGTACCTTGGCATCTTCATATATACAAATCTaGCTGCTCATTCCAAGGAGATTCGTGATCCCTTCT +
Preference number: 3 (lower is better)
Translates to: PFCTLASSYIQI*LLIPRRFVIPS
Trigger: AGAAGGGATCACGAATCTCCTTGGAATGAGCAGCCAGATTTGTATATATGAAGATGCCAAGGTACAGAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR CCA 72 bp GCACACATTTCATCCTTAGGTGCCCCTTCTGTACCTTaGCATCTTCATATATACAAATCTGGCTGCTCATTC +
Preference number: 3 (lower is better)
Translates to: AHISSLGAPSVP*HLHIYKSGCSF
Trigger: GAATGAGCAGCCAGATTTGTATATATGAAGATGCCAAGGTACAGAAGGGGCACCTAAGGATGAAATGTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR CCA 72 bp TCAAATTGGGTGCATCACACTGTGGCCTTTCTGTCATaGAATTCCAAGCGCAAAGATTGTACAAATCACACT +
Preference number: 3 (lower is better)
Translates to: SNWVHHTVAFLS*NSKRKDCTNHT
Trigger: AGTGTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTGATGCACCCAATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp GCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCGTCCTGTGCTGGAGCTaGCCAAGGCAGAGACCTGGC +
Preference number: 4 (lower is better)
Translates to: AKSPWSAGPLGLQLQSPIVLCWS*PRQRPG
Trigger: GCCAGGTCTCTGCCTTGGGCAGCTCCAGCACAGGAC...GATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp GCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCGGCGCACGTAGTTCCTaGAGAGGGGCAGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: AKSPWSAGPLGLQLQSPIGARSS*RGAAGP
Trigger: TGGACCTGCTGCCCCTCTGCAGGAACTACGTGCGCC...GATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR TCA 90 bp GGGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGACACGGACCAGCGCTTaGTGCAGCAGCGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: GQSQRARDSRRGYLEDCMTRTSA*CSSGAS
Trigger: ACTGGCACCGCTGCTGCATCAAGCGCTGGTCCGTGT...CATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp CACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGTTCCAGCTGCCGCCGTaGCTGGACACGTGGCACACG +
Preference number: 4 (lower is better)
Translates to: HSVPGTQGEGTWKTVCPEFQLPP*LDTWHT
Trigger: CGTGTGCCACGTGTCCAGGCACGGCGGCAGCTGGAA...CTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp TGTGATTCCTATGGGTGTGGCCCCATGGTGGGCAGTCACAGCGTGCCAGGGACTACGTGGGTCCTGTGCTaGAGCTGCCCAAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CDSYGCGPMVGSHSVPGTTWVLC*SCPRQR
Trigger: TCTCTGCCTTGGGCAGCTCCAGCACAGGACCCACGT...AGTCCCTGGCACGCTGTGACTGCCCACCATGGGGCCACACCCATAGGAATCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp GCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCTCCTCCAGGGCTGGGTaGTCCAGCAGGCTACGGATT +
Preference number: 4 (lower is better)
Translates to: AKSPWSAGPLGLQLQSPISSRAG*SSRLRI
Trigger: AATCCGTAGCCTGCTGGACCACCCAGCCCTGGAGGA...GATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp TTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCACGGAGAGGCACTTGTTaGTCTCCAGGGCGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: LQRVPGVQALLDCSCSRPRRGTC*SPGRGR
Trigger: TCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCG...TGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR TCA 90 bp GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCACACGGACCAGCGCTTaGTGCAGCAGCGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: ERVPGRLYVLRIRACGVGTRTSA*CSSGAS
Trigger: ACTGGCACCGCTGCTGCATCAAGCGCTGGTCCGTGT...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR TCA 90 bp GCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCGGGTGTGGCAAGCTTTaGTGGTGGCTGCCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: AKSPWSAGPLGLQLQSPIGCGKL*WWLPES
Trigger: ACTCTCTGGCAGCCACCATCAAAGCTTGCCACACCC...GATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATAGGACGTGGGTCCTGTaGTGGAGCTGCCCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LLSACFLQRVPGVQALLDRTWVL*WSCPRQ
Trigger: CTGCCTTGGGCAGCTCCAGCACAGGACCCACGTCCT...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCCAGCAGCTTAGCCGCTaGTCGTGCACCACGGTCTCC +
Preference number: 4 (lower is better)
Translates to: ERVPGRLYVLRIRACGVGQQLSR*SCTTVS
Trigger: GGAGACCGTGGTGCACGAGCAGCGGCTAAGCTGCTG...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp TGTGATTCCTATGGGTGTGGCCCCATGGTGGGCAGTCACAGCGTGCCAGGGACTGCTCAGACAGCTTGTTaGCACCAAGGTGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: CDSYGCGPMVGSHSVPGTAQTAC*HQGAAR
Trigger: CCGTGCTGCACCTTGGTGGCAACAAGCTGTCTGAGC...AGTCCCTGGCACGCTGTGACTGCCCACCATGGGGCCACACCCATAGGAATCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCGTAGTGGTCCTTCTCTaGCTCGCTCCCCTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: ERVPGRLYVLRIRACGVGVVVLL*LAPLAL
Trigger: GAGGGCGAGGGGAGCGAGCCAGAGAAGGACCACTAC...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATGTAGTGGTCCTTCTCTaGCTCGCTCCCCTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: LLSACFLQRVPGVQALLDVVVLL*LAPLAL
Trigger: GAGGGCGAGGGGAGCGAGCCAGAGAAGGACCACTAC...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp GGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCGGAGAGGCACTTGTTaGTCTCCAGGGCGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: GSHSVPGTQGEGTWKTVCRRGTC*SPGRGR
Trigger: TCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCG...ACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR TCA 90 bp TTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCAAGGTACGATGGCCAGTaGCCACTCTGCATCCTCGGA +
Preference number: 4 (lower is better)
Translates to: LQRVPGVQALLDCSCSRPRYDGQ*PLCILG
Trigger: TCCGAGGATGCAGAGTGGTCACTGGCCATCGTACCT...TGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR TCA 90 bp GCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCCACCACGGTCTCCGATaGGGTTGTGGGATAAGTCCA +
Preference number: 4 (lower is better)
Translates to: AKSPWSAGPLGLQLQSPIHHGLR*GCGISP
Trigger: TGGACTTATCCCACAACCTCATCGGAGACCGTGGTG...GATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR TCA 90 bp CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATCCAGGCGCCTGCAGTTaGTTGTTGGCCAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: LLSACFLQRVPGVQALLDPGACS*LLARLS
Trigger: GCTCAACCTGGCCAACAATCAACTGCAGGCGCCTGG...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR TCA 90 bp CACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGCCAGGCGCCTGCAGTTaGTTGTTGGCCAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: HSVPGTQGEGTWKTVCPEPGACS*LLARLS
Trigger: GCTCAACCTGGCCAACAATCAACTGCAGGCGCCTGG...CTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR TCA 90 bp CACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGTTGTGTGCCAGTGCGTaGGCCAGTGACTGTGCGCCA +
Preference number: 4 (lower is better)
Translates to: HSVPGTQGEGTWKTVCPELCASA*ASDCAP
Trigger: TGGCGCACAGTCACTGGCTCACGCACTGGCACACAA...CTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR TCA 90 bp GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCTTGTGTGCCAGTGCGTaGGCCAGTGACTGTGCGCCA +
Preference number: 4 (lower is better)
Translates to: ERVPGRLYVLRIRACGVGLCASA*ASDCAP
Trigger: TGGCGCACAGTCACTGGCTCACGCACTGGCACACAA...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCACGTGGGTCCTGTGCTaGAGCTGCCCAAGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: ERVPGRLYVLRIRACGVGTWVLC*SCPRQR
Trigger: TCTCTGCCTTGGGCAGCTCCAGCACAGGACCCACGT...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp CACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGCGGCATCCGCACAGGTaGGAGGAACTGGTCCACATG +
Preference number: 4 (lower is better)
Translates to: HSVPGTQGEGTWKTVCPERHPHR*EELVHM
Trigger: CATGTGGACCAGTTCCTCCCACCTGTGCGGATGCCG...CTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCCGGCATCCGCACAGGTaGGAGGAACTGGTCCACATG +
Preference number: 4 (lower is better)
Translates to: ERVPGRLYVLRIRACGVGRHPHR*EELVHM
Trigger: CATGTGGACCAGTTCCTCCCACCTGTGCGGATGCCG...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp GGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTTCCTCCAGGGCTGGGTaGTCCAGCAGGCTACGGATT +
Preference number: 4 (lower is better)
Translates to: GSHSVPGTQGEGTWKTVCSSRAG*SSRLRI
Trigger: AATCCGTAGCCTGCTGGACCACCCAGCCCTGGAGGA...ACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp GCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCAGAGGAGTGTGGCTGTaGGCTCAGACAGCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: AKSPWSAGPLGLQLQSPIRGVWL*AQTACC
Trigger: GCAACAAGCTGTCTGAGCCCACAGCCACACTCCTCT...GATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR TCA 90 bp CACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGAGGTACGATGGCCAGTaGCCACTCTGCATCCTCGGA +
Preference number: 4 (lower is better)
Translates to: HSVPGTQGEGTWKTVCPERYDGQ*PLCILG
Trigger: TCCGAGGATGCAGAGTGGTCACTGGCCATCGTACCT...CTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp CACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGGTGTCAGGAGGACGTGGGTCCTGTaGTGGAGCTGCCCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: HTPSHLHVCTLELSEGVRRTWVL*WSCPRQ
Trigger: CTGCCTTGGGCAGCTCCAGCACAGGACCCACGTCCT...CCTGACACCCTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp GGGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTTGTTGCCACCAAGGTaGAGCACGGAGAGGCACTTG +
Preference number: 4 (lower is better)
Translates to: GQSQRARDSRRGYLEDCMLLPPR*STERHL
Trigger: CAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAA...CATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATACTCTCAGGCGACTGTaGCTCAGCAGCTTAGCCGCT +
Preference number: 4 (lower is better)
Translates to: LLSACFLQRVPGVQALLDTLRRL*LSSLAA
Trigger: AGCGGCTAAGCTGCTGAGCCACAGTCGCCTGAGAGT...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR CAA 72 bp CTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATaGCAGCTGCAGTCGCCCATCTTTGAGGTAGACGGG +
Preference number: 4 (lower is better)
Translates to: LAKSPWSAGPLG*QLQSPIFEVDG
Trigger: CCCGTCTACCTCAAAGATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGTTCCAGCTGCCGCCGTaGCTGGACACGTGGCACACG +
Preference number: 4 (lower is better)
Translates to: THTHTPSHLHVCTLELSEFQLPP*LDTWHT
Trigger: CGTGTGCCACGTGTCCAGGCACGGCGGCAGCTGGAA...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATAGAGGAGTGTGGCTGTaGGCTCAGACAGCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: LLSACFLQRVPGVQALLDRGVWL*AQTACC
Trigger: GCAACAAGCTGTCTGAGCCCACAGCCACACTCCTCT...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATAGCTTTGATGGTGGCTaGCAGAGAGTAGCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: LLSACFLQRVPGVQALLDSFDGG*QRVAVS
Trigger: CGAGACTGCTACTCTCTGGCAGCCACCATCAAAGCT...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp GGCTCGGGAGAAGACAGGCCTCTGTCAAATTGGGTGCATCACACTGTGGCCTTTTTGTTGCCACCAAGGTaGAGCACGGAGAGGCACTTG +
Preference number: 4 (lower is better)
Translates to: GSGEDRPLSNWVHHTVAFLLPPR*STERHL
Trigger: CAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAA...AAAGGCCACAGTGTGATGCACCCAATTTGACAGAGGCCTGTCTTCTCCCGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp GGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTTGCTTCCCACCATCCTaGCCAATGTGGTTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: GSHSVPGTQGEGTWKTVCCFPPS*PMWLQD
Trigger: ATCCTGCAACCACATTGGGCAGGATGGTGGGAAGCA...ACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp GGCTCGGGAGAAGACAGGCCTCTGTCAAATTGGGTGCATCACACTGTGGCCTTTATGCCTTCCAGGAGTTaGTTCCCACCATCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GSGEDRPLSNWVHHTVAFMPSRS*FPPSCP
Trigger: TGGGCAGGATGGTGGGAAGCAACTCCTGGAAGGCAT...AAAGGCCACAGTGTGATGCACCCAATTTGACAGAGGCCTGTCTTCTCCCGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp CACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGTCTCCGATGAGGTTGTaGGATAAGTCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HSVPGTQGEGTWKTVCPESPMRL*DKSSSS
Trigger: GGAGGAGCTGGACTTATCCCACAACCTCATCGGAGA...CTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATAGGTACTCGCTCTCCTaGGATACATCTGACAGTCGC +
Preference number: 4 (lower is better)
Translates to: LLSACFLQRVPGVQALLDRYSLS*DTSDSR
Trigger: GCGACTGTCAGATGTATCCCAGGAGAGCGAGTACCT...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp GTGTGTGTGTGTAGACTGAGGTCAGGGCTCAGCTATCTGCTTAGTAAAAAGGGAGTCCTGTGCTGGAGCTaGCCAAGGCAGAGACCTGGC +
Preference number: 4 (lower is better)
Translates to: VCVCRLRSGLSYLLSKKGVLCWS*PRQRPG
Trigger: GCCAGGTCTCTGCCTTGGGCAGCTCCAGCACAGGAC...TCCCTTTTTACTAAGCAGATAGCTGAGCCCTGACCTCAGTCTACACACACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp GTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGATGCCTTCCAGGAGTTaGTTCCCACCATCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: VPGTQGEGTWKTVCPEDKMPSRS*FPPSCP
Trigger: TGGGCAGGATGGTGGGAAGCAACTCCTGGAAGGCAT...CTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR TCA 90 bp ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGGGTGTGGCAAGCTTTaGTGGTGGCTGCCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: THTHTPSHLHVCTLELSEGCGKL*WWLPES
Trigger: ACTCTCTGGCAGCCACCATCAAAGCTTGCCACACCC...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp ATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTCAGCAGCTTAGCCGCTaGTCGTGCACCACGGTCTCC +
Preference number: 4 (lower is better)
Translates to: MKSLSRDGLLESFAFPVPQQLSR*SCTTVS
Trigger: GGAGACCGTGGTGCACGAGCAGCGGCTAAGCTGCTG...AGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp GGGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCTTGTTGTCTGATATaGCTTCCAGGAGTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GQSQRARDSRRGYLEDCMSCCLI*LPGVAS
Trigger: GGAAGCAACTCCTGGAAGGCATATCAGACAACAAGA...CATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp GAACCTCTGCTAGCAGCTGTGGCTACACACACACACACACACACACACACACACTTGGCATGCAGAACCTaGCCAATGAGGTACTCGCTC +
Preference number: 4 (lower is better)
Translates to: EPLLAAVATHTHTHTHTHLACRT*PMRYSL
Trigger: GAGCGAGTACCTCATTGGCCAGGTTCTGCATGCCAA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCCACAGCTGCTAGCAGAGGTTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR TCA 90 bp GGCAGTCACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTAATGGTCTTGTTGTCTaGTATGCCTTCCAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: GSHSVPGTQGEGTWKTVCNGLVV*YAFQEL
Trigger: CAACTCCTGGAAGGCATATCAGACAACAAGACCATT...ACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTGACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR TCA 90 bp CACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGGTGTCAGGACAGTTGTTAGTGGGTaGGGAGAAGTGGCCAGGATT +
Preference number: 4 (lower is better)
Translates to: HTPSHLHVCTLELSEGVRTVVSG*GEVARI
Trigger: AATCCTGGCCACTTCTCCTCACCCACTAACAACTGT...CCTGACACCCTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp ATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTGTGGGTGAGGAGAAGTaGCCAGGATTCAGGGTCCGC +
Preference number: 4 (lower is better)
Translates to: MKSLSRDGLLESFAFPVPVGEEK*PGFRVR
Trigger: GCGGACCCTGAATCCTGGCCACTTCTCCTCACCCAC...AGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR TCA 90 bp GTGTGTGTGTGTAGACTGAGGTCAGGGCTCAGCTATCTGCTTAGTAAAAAGGGACACCACGGTCTCCGATaGGGTTGTGGGATAAGTCCA +
Preference number: 4 (lower is better)
Translates to: VCVCRLRSGLSYLLSKKGHHGLR*GCGISP
Trigger: TGGACTTATCCCACAACCTCATCGGAGACCGTGGTG...TCCCTTTTTACTAAGCAGATAGCTGAGCCCTGACCTCAGTCTACACACACACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp ACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACAGGCGCACGTAGTTCCTaGAGAGGGGCAGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: TLWPFCHGIPSAKIVQITGARSS*RGAAGP
Trigger: TGGACCTGCTGCCCCTCTGCAGGAACTACGTGCGCC...TGTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp ATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTGGACATTTGGGACCTTaGTCTTCAGCTGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: MKSLSRDGLLESFAFPVPGHLGP*SSAGLG
Trigger: CCCCAGGCCAGCTGAAGACCAAGGTCCCAAATGTCC...AGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp GAACCTCTGCTAGCAGCTGTGGCTACACACACACACACACACACACACACACACAAGATCTTGAGGGTGTaGCAAGCTTTGATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: EPLLAAVATHTHTHTHTHKILRV*QALMVA
Trigger: AGCCACCATCAAAGCTTGCCACACCCTCAAGATCTT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCCACAGCTGCTAGCAGAGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp ATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTTCTGGGAGAGGAGTGTaGCTGTGGGCTCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: MKSLSRDGLLESFAFPVPSGRGV*LWAQTA
Trigger: AGCTGTCTGAGCCCACAGCCACACTCCTCTCCCAGA...AGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCGGTCGAACTCTAGAATaGTCTTGTTGTCTGATATGC +
Preference number: 4 (lower is better)
Translates to: ERVPGRLYVLRIRACGVGGRTLE*SCCLIC
Trigger: GCATATCAGACAACAAGACCATTCTAGAGTTCGACC...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR TCA 90 bp CACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGGTGTCAGGAATGGTCTTGTTGTCTaGTATGCCTTCCAGGAGTTG +
Preference number: 4 (lower is better)
Translates to: HTPSHLHVCTLELSEGVRNGLVV*YAFQEL
Trigger: CAACTCCTGGAAGGCATATCAGACAACAAGACCATT...CCTGACACCCTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp GTGTGTGTGTGTAGACTGAGGTCAGGGCTCAGCTATCTGCTTAGTAAAAAGGGAAGCTTTGATGGTGGCTaGCAGAGAGTAGCAGTCTCG +
Preference number: 4 (lower is better)
Translates to: VCVCRLRSGLSYLLSKKGSFDGG*QRVAVS
Trigger: CGAGACTGCTACTCTCTGGCAGCCACCATCAAAGCT...TCCCTTTTTACTAAGCAGATAGCTGAGCCCTGACCTCAGTCTACACACACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp ACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACAGTGGGTGAGGAGAAGTaGCCAGGATTCAGGGTCCGC +
Preference number: 4 (lower is better)
Translates to: TLWPFCHGIPSAKIVQITVGEEK*PGFRVR
Trigger: GCGGACCCTGAATCCTGGCCACTTCTCCTCACCCAC...TGTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR TCA 90 bp GTGTGTGTGTGTAGACTGAGGTCAGGGCTCAGCTATCTGCTTAGTAAAAAGGGAACAGTTGTTAGTGGGTaGGGAGAAGTGGCCAGGATT +
Preference number: 4 (lower is better)
Translates to: VCVCRLRSGLSYLLSKKGTVVSG*GEVARI
Trigger: AATCCTGGCCACTTCTCCTCACCCACTAACAACTGT...TCCCTTTTTACTAAGCAGATAGCTGAGCCCTGACCTCAGTCTACACACACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp ACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACATCTGGGAGAGGAGTGTaGCTGTGGGCTCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: TLWPFCHGIPSAKIVQITSGRGV*LWAQTA
Trigger: AGCTGTCTGAGCCCACAGCCACACTCCTCTCCCAGA...TGTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp GTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGTCGAACTCTAGAATaGTCTTGTTGTCTGATATGC +
Preference number: 4 (lower is better)
Translates to: VPGTQGEGTWKTVCPEDKGRTLE*SCCLIC
Trigger: GCATATCAGACAACAAGACCATTCTAGAGTTCGACC...CTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp ATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTAGGTACTCGCTCTCCTaGGATACATCTGACAGTCGC +
Preference number: 4 (lower is better)
Translates to: MKSLSRDGLLESFAFPVPRYSLS*DTSDSR
Trigger: GCGACTGTCAGATGTATCCCAGGAGAGCGAGTACCT...AGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp CACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACTGCTCTAGCGGCAGCTaGTTCAGGATAGGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: HTVAFLSWNSKRKDCTNHCSSGS*FRIGLF
Trigger: GAACAACCCTATCCTGAAGCAGCTGCCGCTAGAGCA...GTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp CACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACTGCTTCCCACCATCCTaGCCAATGTGGTTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: HTVAFLSWNSKRKDCTNHCFPPS*PMWLQD
Trigger: ATCCTGCAACCACATTGGGCAGGATGGTGGGAAGCA...GTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp TTTACACTGAATGTTCTTGTTTCTCTAATTAGAACCTCTGCTAGCAGCTGTGGCGGACATTTGGGACCTTaGTCTTCAGCTGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: FTLNVLVSLIRTSASSCGGHLGP*SSAGLG
Trigger: CCCCAGGCCAGCTGAAGACCAAGGTCCCAAATGTCC...GCCACAGCTGCTAGCAGAGGTTCTAATTAGAGAAACAAGAACATTCAGTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp CACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGGTGTCAGGAGGATAGGGTTGTTCTaGAAGTTCTTGACGATATGT +
Preference number: 4 (lower is better)
Translates to: HTPSHLHVCTLELSEGVRRIGLF*KFLTIC
Trigger: ACATATCGTCAAGAACTTCCAGAACAACCCTATCCT...CCTGACACCCTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp GTGTGTGTGTGTAGACTGAGGTCAGGGCTCAGCTATCTGCTTAGTAAAAAGGGAAAGATCTTGAGGGTGTaGCAAGCTTTGATGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VCVCRLRSGLSYLLSKKGKILRV*QALMVA
Trigger: AGCCACCATCAAAGCTTGCCACACCCTCAAGATCTT...TCCCTTTTTACTAAGCAGATAGCTGAGCCCTGACCTCAGTCTACACACACACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp CACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACTCTCCGATGAGGTTGTaGGATAAGTCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: HTVAFLSWNSKRKDCTNHSPMRL*DKSSSS
Trigger: GGAGGAGCTGGACTTATCCCACAACCTCATCGGAGA...GTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CCA 90 bp TTTACACTGAATGTTCTTGTTTCTCTAATTAGAACCTCTGCTAGCAGCTGTGGCACTCTCAGGCGACTGTaGCTCAGCAGCTTAGCCGCT +
Preference number: 4 (lower is better)
Translates to: FTLNVLVSLIRTSASSCGTLRRL*LSSLAA
Trigger: AGCGGCTAAGCTGCTGAGCCACAGTCGCCTGAGAGT...GCCACAGCTGCTAGCAGAGGTTCTAATTAGAGAAACAAGAACATTCAGTGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR TCA 90 bp TTTACACTGAATGTTCTTGTTTCTCTAATTAGAACCTCTGCTAGCAGCTGTGGCTCATGCCACAGTCTTTaGCGCCGTACACCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: FTLNVLVSLIRTSASSCGSCHSL*RRTPGP
Trigger: TGGACCTGGTGTACGGCGTCAAAGACTGTGGCATGA...GCCACAGCTGCTAGCAGAGGTTCTAATTAGAGAAACAAGAACATTCAGTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR GCA 90 bp ATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTTCTTGTTGTCTGATATaGCTTCCAGGAGTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: MKSLSRDGLLESFAFPVPSCCLI*LPGVAS
Trigger: GGAAGCAACTCCTGGAAGGCATATCAGACAACAAGA...AGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
3UTR CAA 72 bp TGCACACATTTCATCCTTAGGTGCCCCTTCTGTACCTaGGCATCTTCATATATACAAATCTGGCTGCTCATT +
Preference number: 4 (lower is better)
Translates to: CTHFILRCPFCT*ASSYIQIWLLI
Trigger: AATGAGCAGCCAGATTTGTATATATGAAGATGCCAAGGTACAGAAGGGGCACCTAAGGATGAAATGTGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS GCA 90 bp GCGGGGTCGGCATCCGCACAGGTGGGAGGAACTGGTCCACATGAATaGGGCGCACGTAGTTCCTGCAGAGGGGCAGCAGGTCCAGGATCA +
Preference number: 5 (lower is better)
Translates to: AGSASAQVGGTGPHE*GARSSCRGAAGPGS
Trigger: TGATCCTGGACCTGCTGCCCCTCTGCAGGAACTACGTGCGCCGCATTCATGTGGACCAGTTCCTCCCACCTGTGCGGATGCCGACCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CCA 90 bp CCACCAAGGTGCAGCACGGAGAGGCACTTGTTGGTCTCCAGGGCGTaGGCGATTGCTTGGCCACCCTCGTCCTCGATACAGTTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: PPRCSTERHLLVSRA*AIAWPPSSSIQLRR
Trigger: CCGCCTCAACTGTATCGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS GCA 90 bp TTCTCCAGGTGTCTCTCGAAGAACATACGCTTCCAGCTGCCGCCGTaGCTGGACACGTGGCACACGGACCAGCGCTTGATGCAGCAGCGG +
Preference number: 5 (lower is better)
Translates to: FSRCLSKNIRFQLPP*LDTWHTDQRLMQQR
Trigger: CCGCTGCTGCATCAAGCGCTGGTCCGTGTGCCACGTGTCCAGGCACGGCGGCAGCTGGAAGCGTATGTTCTTCGAGAGACACCTGGAGAA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS GCA 90 bp GTGCAGCACGGAGAGGCACTTGTTGGTCTCCAGGGCGTGGGCGATTaGTTGGCCACCCTCGTCCTCGATACAGTTGAGGCGGAGGTTGAG +
Preference number: 5 (lower is better)
Translates to: VQHGEALVGLQGVGD*LATLVLDTVEAEVE
Trigger: CTCAACCTCCGCCTCAACTGTATCGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CCA 90 bp CAGACAGCTTGTTGCCACCAAGGTGCAGCACGGAGAGGCACTTGTTaGTCTCCAGGGCGTGGGCGATTGCTTGGCCACCCTCGTCCTCGA +
Preference number: 5 (lower is better)
Translates to: QTACCHQGAARRGTC*SPGRGRLLGHPRPR
Trigger: TCGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAAGCTGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS TCA 90 bp TCCGCTGGCGGGCAGCCTCTCGGTTGGCATGCAGAACCTGGCCAATaGGGTACTCGCTCTCCTGGGATACATCTGACAGTCGCAGGTCGA +
Preference number: 5 (lower is better)
Translates to: SAGGQPLGWHAEPGQ*GTRSPGIHLTVAGR
Trigger: TCGACCTGCGACTGTCAGATGTATCCCAGGAGAGCGAGTACCTCATTGGCCAGGTTCTGCATGCCAACCGAGAGGCTGCCCGCCAGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS GCA 90 bp GAGAGGAGTGTGGCTGTGGGCTCAGACAGCTTGTTGCCACCAAGGTaGAGCACGGAGAGGCACTTGTTGGTCTCCAGGGCGTGGGCGATT +
Preference number: 5 (lower is better)
Translates to: ERSVAVGSDSLLPPR*STERHLLVSRAWAI
Trigger: AATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAAGCTGTCTGAGCCCACAGCCACACTCCTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS GCA 90 bp TGGCCAGGATTCAGGGTCCGCTGGCGGGCAGCCTCTCGGTTGGCATaGAGAACCTGGCCAATGAGGTACTCGCTCTCCTGGGATACATCT +
Preference number: 5 (lower is better)
Translates to: WPGFRVRWRAASRLA*RTWPMRYSLSWDTS
Trigger: AGATGTATCCCAGGAGAGCGAGTACCTCATTGGCCAGGTTCTGCATGCCAACCGAGAGGCTGCCCGCCAGCGGACCCTGAATCCTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CCA 90 bp CCACTCTGCATCCTCGGAGATGATCCTGCGCATGCGACGGACATTTaGGACCTTGGTCTTCAGCTGGCCTGGGGTAGGGGTGCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: PLCILGDDPAHATDI*DLGLQLAWGRGAAG
Trigger: ACCAGCAGCACCCCTACCCCAGGCCAGCTGAAGACCAAGGTCCCAAATGTCCGTCGCATGCGCAGGATCATCTCCGAGGATGCAGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CCA 90 bp AGCACGGAGAGGCACTTGTTGGTCTCCAGGGCGTGGGCGATTGCTTaGCCACCCTCGTCCTCGATACAGTTGAGGCGGAGGTTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: STERHLLVSRAWAIA*PPSSSIQLRRRLRK
Trigger: CTTCCTCAACCTCCGCCTCAACTGTATCGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CCA 90 bp TTCAGGGTCCGCTGGCGGGCAGCCTCTCGGTTGGCATGCAGAACCTaGCCAATGAGGTACTCGCTCTCCTGGGATACATCTGACAGTCGC +
Preference number: 5 (lower is better)
Translates to: FRVRWRAASRLACRT*PMRYSLSWDTSDSR
Trigger: GCGACTGTCAGATGTATCCCAGGAGAGCGAGTACCTCATTGGCCAGGTTCTGCATGCCAACCGAGAGGCTGCCCGCCAGCGGACCCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CCA 90 bp CAGTTGTTAGTGGGTGAGGAGAAGTGGCCAGGATTCAGGGTCCGCTaGCGGGCAGCCTCTCGGTTGGCATGCAGAACCTGGCCAATGAGG +
Preference number: 5 (lower is better)
Translates to: QLLVGEEKWPGFRVR*RAASRLACRTWPMR
Trigger: CCTCATTGGCCAGGTTCTGCATGCCAACCGAGAGGCTGCCCGCCAGCGGACCCTGAATCCTGGCCACTTCTCCTCACCCACTAACAACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCCACACGGACCAGCGCTaGATGCAGCAGCGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: ERVPGRLYVLRIRACGVGHTDQR*MQQRCQ
Trigger: CTGGCACCGCTGCTGCATCAAGCGCTGGTCCGTGTG...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATACGGAGAGGCACTTGTaGGTCTCCAGGGCGTGGGCG +
Preference number: 5 (lower is better)
Translates to: LLSACFLQRVPGVQALLDTERHL*VSRAWA
Trigger: CGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGT...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp GCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCGGCTCAGACAGCTTGTaGCCACCAAGGTGCAGCACG +
Preference number: 5 (lower is better)
Translates to: AKSPWSAGPLGLQLQSPIGSDSL*PPRCST
Trigger: CGTGCTGCACCTTGGTGGCAACAAGCTGTCTGAGCC...GATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS TCA 90 bp GTCCTGTGCTGGAGCTGCCCAAGGCAGAGACCTGGCGCTGGATGGTaGGAACCGACTGGCTGTGAGACGAAGAGTTGGACGGTACTGATG +
Preference number: 5 (lower is better)
Translates to: VLCWSCPRQRPGAGW*EPTGCETKSWTVLM
Trigger: CATCAGTACCGTCCAACTCTTCGTCTCACAGCCAGTCGGTTCTCACCATCCAGCGCCAGGTCTCTGCCTTGGGCAGCTCCAGCACAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp GCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCCAGTTGAGGCGGAGGTaGAGGAAGACCAGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: AKSPWSAGPLGLQLQSPIQLRRR*RKTRLV
Trigger: CACCAACCTGGTCTTCCTCAACCTCCGCCTCAACTG...GATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCCGGACATTTGGGACCTaGGTCTTCAGCTGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: ERVPGRLYVLRIRACGVGRTFGT*VFSWPG
Trigger: CCCAGGCCAGCTGAAGACCAAGGTCCCAAATGTCCG...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp GCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATTGCAGCTGCAGTCGCCCATCGCATGCGACGGACATTaGGGACCTTGGTCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: AKSPWSAGPLGLQLQSPIACDGH*GPWSSA
Trigger: AGCTGAAGACCAAGGTCCCAAATGTCCGTCGCATGC...GATGGGCGACTGCAGCTGCAATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp TGTGATTCCTATGGGTGTGGCCCCATGGTGGGCAGTCACAGCGTGCCAGGGACTGCATGCGACGGACATTaGGGACCTTGGTCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: CDSYGCGPMVGSHSVPGTACDGH*GPWSSA
Trigger: AGCTGAAGACCAAGGTCCCAAATGTCCGTCGCATGC...AGTCCCTGGCACGCTGTGACTGCCCACCATGGGGCCACACCCATAGGAATCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp GTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGCACACGGACCAGCGCTaGATGCAGCAGCGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: VPGTQGEGTWKTVCPEDKHTDQR*MQQRCQ
Trigger: CTGGCACCGCTGCTGCATCAAGCGCTGGTCCGTGTG...CTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp TGTGATTCCTATGGGTGTGGCCCCATGGTGGGCAGTCACAGCGTGCCAGGGACTTTCATGCCACAGTCTTaGACGCCGTACACCAGGTCC +
Preference number: 5 (lower is better)
Translates to: CDSYGCGPMVGSHSVPGTFMPQS*TPYTRS
Trigger: GGACCTGGTGTACGGCGTCAAAGACTGTGGCATGAA...AGTCCCTGGCACGCTGTGACTGCCCACCATGGGGCCACACCCATAGGAATCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp GAACCTCTGCTAGCAGCTGTGGCTACACACACACACACACACACACACACACACACGGAGAGGCACTTGTaGGTCTCCAGGGCGTGGGCG +
Preference number: 5 (lower is better)
Translates to: EPLLAAVATHTHTHTHTHTERHL*VSRAWA
Trigger: CGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCCACAGCTGCTAGCAGAGGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCGGCTCAGACAGCTTGTaGCCACCAAGGTGCAGCACG +
Preference number: 5 (lower is better)
Translates to: ERVPGRLYVLRIRACGVGGSDSL*PPRCST
Trigger: CGTGCTGCACCTTGGTGGCAACAAGCTGTCTGAGCC...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATCGGTCTCCGATGAGGTaGTGGGATAAGTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LLSACFLQRVPGVQALLDRSPMR*WDKSSS
Trigger: GGAGCTGGACTTATCCCACAACCTCATCGGAGACCG...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp GAGAGGGTACCTGGAAGACTGTATGTCCTGAGGATAAGGGCTTGTGGGGTGGGCCGGTCTCCGATGAGGTaGTGGGATAAGTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: ERVPGRLYVLRIRACGVGRSPMR*WDKSSS
Trigger: GGAGCTGGACTTATCCCACAACCTCATCGGAGACCG...GCCCACCCCACAAGCCCTTATCCTCAGGACATACAGTCTTCCAGGTACCCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp CACAGCGTGCCAGGGACTCAAGGAGAGGGTACCTGGAAGACTGTATGTCCTGAGTTCATGCCACAGTCTTaGACGCCGTACACCAGGTCC +
Preference number: 5 (lower is better)
Translates to: HSVPGTQGEGTWKTVCPEFMPQS*TPYTRS
Trigger: GGACCTGGTGTACGGCGTCAAAGACTGTGGCATGAA...CTCAGGACATACAGTCTTCCAGGTACCCTCTCCTTGAGTCCCTGGCACGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp CTACTCAGCGCCTGCTTCTTGCAAAGAGTCCCTGGAGTGCAGGCCCTCTTGGATGTCAGCTTGAAGATCTaGAGGGTGTGGCAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: LLSACFLQRVPGVQALLDVSLKI*RVWQAL
Trigger: CAAAGCTTGCCACACCCTCAAGATCTTCAAGCTGAC...ATCCAAGAGGGCCTGCACTCCAGGGACTCTTTGCAAGAAGCAGGCGCTGAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS TCA 90 bp GATATGTTGAATGCAGAGTTCTGTAAGGAGAGGTACGATGGCCAGTaGCCACTCTGCATCCTCGGAGATGATCCTGCGCATGCGACGGAC +
Preference number: 5 (lower is better)
Translates to: DMLNAEFCKERYDGQ*PLCILGDDPAHATD
Trigger: GTCCGTCGCATGCGCAGGATCATCTCCGAGGATGCAGAGTGGTCACTGGCCATCGTACCTCTCCTTACAGAACTCTGCATTCAACATATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CCA 90 bp TCTCGGTTGGCATGCAGAACCTGGCCAATGAGGTACTCGCTCTCCTaGGATACATCTGACAGTCGCAGGTCGAACTCTAGAATGGTCTTG +
Preference number: 5 (lower is better)
Translates to: SRLACRTWPMRYSLS*DTSDSRRSNSRMVL
Trigger: CAAGACCATTCTAGAGTTCGACCTGCGACTGTCAGATGTATCCCAGGAGAGCGAGTACCTCATTGGCCAGGTTCTGCATGCCAACCGAGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGAGGGTGTGGCAAGCTTaGATGGTGGCTGCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: THTHTPSHLHVCTLELSERVWQA*MVAARE
Trigger: CTCTCTGGCAGCCACCATCAAAGCTTGCCACACCCT...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGTATGCCTTCCAGGAGTaGCTTCCCACCATCCTGCCC +
Preference number: 5 (lower is better)
Translates to: THTHTPSHLHVCTLELSEYAFQE*LPTILP
Trigger: GGGCAGGATGGTGGGAAGCAACTCCTGGAAGGCATA...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS GCA 90 bp GGTCAGCTTGAAGATCTTGAGGGTGTGGCAAGCTTTGATGGTGGCTaGCAGAGAGTAGCAGTCTCGGTAGGTGAAGAGAAAGAGGTTCCA +
Preference number: 5 (lower is better)
Translates to: GQLEDLEGVASFDGG*QRVAVSVGEEKEVP
Trigger: TGGAACCTCTTTCTCTTCACCTACCGAGACTGCTACTCTCTGGCAGCCACCATCAAAGCTTGCCACACCCTCAAGATCTTCAAGCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS GCA 90 bp CTGACAGTCGCAGGTCGAACTCTAGAATGGTCTTGTTGTCTGATATaGCTTCCAGGAGTTGCTTCCCACCATCCTGCCCAATGTGGTTGC +
Preference number: 5 (lower is better)
Translates to: LTVAGRTLEWSCCLI*LPGVASHHPAQCGC
Trigger: GCAACCACATTGGGCAGGATGGTGGGAAGCAACTCCTGGAAGGCATATCAGACAACAAGACCATTCTAGAGTTCGACCTGCGACTGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CCA 90 bp CGCTCTCCTGGGATACATCTGACAGTCGCAGGTCGAACTCTAGAATaGTCTTGTTGTCTGATATGCCTTCCAGGAGTTGCTTCCCACCAT +
Preference number: 5 (lower is better)
Translates to: RSPGIHLTVAGRTLE*SCCLICLPGVASHH
Trigger: ATGGTGGGAAGCAACTCCTGGAAGGCATATCAGACAACAAGACCATTCTAGAGTTCGACCTGCGACTGTCAGATGTATCCCAGGAGAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp CACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACCGGACATTTGGGACCTaGGTCTTCAGCTGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: HTVAFLSWNSKRKDCTNHRTFGT*VFSWPG
Trigger: CCCAGGCCAGCTGAAGACCAAGGTCCCAAATGTCCG...GTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp ATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTTATGCCTTCCAGGAGTaGCTTCCCACCATCCTGCCC +
Preference number: 5 (lower is better)
Translates to: MKSLSRDGLLESFAFPVPYAFQE*LPTILP
Trigger: GGGCAGGATGGTGGGAAGCAACTCCTGGAAGGCATA...AGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp CACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACAGGGTGTGGCAAGCTTaGATGGTGGCTGCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: HTVAFLSWNSKRKDCTNHRVWQA*MVAARE
Trigger: CTCTCTGGCAGCCACCATCAAAGCTTGCCACACCCT...GTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGTTACTTCGGGTCAGCTaGAAGATCTTGAGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: THTHTPSHLHVCTLELSELLRVS*KILRVW
Trigger: CCACACCCTCAAGATCTTCAAGCTGACCCGAAGTAA...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp ATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTTTGAGGAAGACCAGGTaGGTGTTGTGTGCCAGTGCG +
Preference number: 5 (lower is better)
Translates to: MKSLSRDGLLESFAFPVPLRKTR*VLCASA
Trigger: CGCACTGGCACACAACACCAACCTGGTCTTCCTCAA...AGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp CACACTGTGGCCTTTCTGTCATGGAATTCCAAGCGCAAAGATTGTACAAATCACCAGTTGAGGCGGAGGTaGAGGAAGACCAGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: HTVAFLSWNSKRKDCTNHQLRRR*RKTRLV
Trigger: CACCAACCTGGTCTTCCTCAACCTCCGCCTCAACTG...GTGATTTGTACAATCTTTGCGCTTGGAATTCCATGACAGAAAGGCCACAGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp GAACCTCTGCTAGCAGCTGTGGCTACACACACACACACACACACACACACACACTCTAGAATGGTCTTGTaGTCTGATATGCCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: EPLLAAVATHTHTHTHTHSRMVL*SDMPSR
Trigger: CCTGGAAGGCATATCAGACAACAAGACCATTCTAGA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCCACAGCTGCTAGCAGAGGTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp GGCTCGGGAGAAGACAGGCCTCTGTCAAATTGGGTGCATCACACTGTGGCCTTTAACTCTAGAATGGTCTaGTTGTCTGATATGCCTTCC +
Preference number: 5 (lower is better)
Translates to: GSGEDRPLSNWVHHTVAFNSRMV*LSDMPS
Trigger: GGAAGGCATATCAGACAACAAGACCATTCTAGAGTT...AAAGGCCACAGTGTGATGCACCCAATTTGACAGAGGCCTGTCTTCTCCCGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp GTGTGTGTGTGTAGACTGAGGTCAGGGCTCAGCTATCTGCTTAGTAAAAAGGGAGTCAGCTTGAAGATCTaGAGGGTGTGGCAAGCTTTG +
Preference number: 5 (lower is better)
Translates to: VCVCRLRSGLSYLLSKKGVSLKI*RVWQAL
Trigger: CAAAGCTTGCCACACCCTCAAGATCTTCAAGCTGAC...TCCCTTTTTACTAAGCAGATAGCTGAGCCCTGACCTCAGTCTACACACACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp GTGTGTGTGTGTAGACTGAGGTCAGGGCTCAGCTATCTGCTTAGTAAAAAGGGATTACTTCGGGTCAGCTaGAAGATCTTGAGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: VCVCRLRSGLSYLLSKKGLLRVS*KILRVW
Trigger: CCACACCCTCAAGATCTTCAAGCTGACCCGAAGTAA...TCCCTTTTTACTAAGCAGATAGCTGAGCCCTGACCTCAGTCTACACACACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS TCA 90 bp AGCTGCTTCAGGATAGGGTTGTTCTGGAAGTTCTTGACGATATGTTaGATGCAGAGTTCTGTAAGGAGAGGTACGATGGCCAGTGACCAC +
Preference number: 5 (lower is better)
Translates to: SCFRIGLFWKFLTIC*MQSSVRRGTMASDH
Trigger: GTGGTCACTGGCCATCGTACCTCTCCTTACAGAACTCTGCATTCAACATATCGTCAAGAACTTCCAGAACAACCCTATCCTGAAGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp ACACACACACACACACCCTCACACCTACATGTTTGCACTCTGGAACTGTCAGAGGAATTCTCAGTACAGTaGTTAGTGGGTGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: THTHTPSHLHVCTLELSEEFSVQ*LVGEEK
Trigger: CTTCTCCTCACCCACTAACAACTGTACTGAGAATTC...CTCTGACAGTTCCAGAGTGCAAACATGTAGGTGTGAGGGTGTGTGTGTGTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp TTTACACTGAATGTTCTTGTTTCTCTAATTAGAACCTCTGCTAGCAGCTGTGGCTTGAGGAAGACCAGGTaGGTGTTGTGTGCCAGTGCG +
Preference number: 5 (lower is better)
Translates to: FTLNVLVSLIRTSASSCGLRKTR*VLCASA
Trigger: CGCACTGGCACACAACACCAACCTGGTCTTCCTCAA...GCCACAGCTGCTAGCAGAGGTTCTAATTAGAGAAACAAGAACATTCAGTGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp GTGTGTGTGTGTAGACTGAGGTCAGGGCTCAGCTATCTGCTTAGTAAAAAGGGATCTAGAATGGTCTTGTaGTCTGATATGCCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: VCVCRLRSGLSYLLSKKGSRMVL*SDMPSR
Trigger: CCTGGAAGGCATATCAGACAACAAGACCATTCTAGA...TCCCTTTTTACTAAGCAGATAGCTGAGCCCTGACCTCAGTCTACACACACACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp ATGAAGAGTTTGAGCAGGGATGGTCTTTTAGAGTCCTTTGCCTTCCCTGTTCCTAACTCTAGAATGGTCTaGTTGTCTGATATGCCTTCC +
Preference number: 5 (lower is better)
Translates to: MKSLSRDGLLESFAFPVPNSRMV*LSDMPS
Trigger: GGAAGGCATATCAGACAACAAGACCATTCTAGAGTT...AGGAACAGGGAAGGCAAAGGACTCTAAAAGACCATCCCTGCTCAAACTCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp TTTACACTGAATGTTCTTGTTTCTCTAATTAGAACCTCTGCTAGCAGCTGTGGCGAATTCTCAGTACAGTaGTTAGTGGGTGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: FTLNVLVSLIRTSASSCGEFSVQ*LVGEEK
Trigger: CTTCTCCTCACCCACTAACAACTGTACTGAGAATTC...GCCACAGCTGCTAGCAGAGGTTCTAATTAGAGAAACAAGAACATTCAGTGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS-3UTR CAA 90 bp TTTACACTGAATGTTCTTGTTTCTCTAATTAGAACCTCTGCTAGCAGCTGTGGCGTTCTTGACGATATGTaGAATGCAGAGTTCTGTAAG +
Preference number: 5 (lower is better)
Translates to: FTLNVLVSLIRTSASSCGVLDDM*NAEFCK
Trigger: CTTACAGAACTCTGCATTCAACATATCGTCAAGAAC...GCCACAGCTGCTAGCAGAGGTTCTAATTAGAGAAACAAGAACATTCAGTGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CCA 72 bp TCGCCCTCACTGCCAGAGTCCGACTGTTCCTCTCCCTaGAGCGGGGTCGGCATCCGCACAGGTGGGAGGAAC +
Preference number: 6 (lower is better)
Translates to: SPSLPESDCSSP*SGVGIRTGGRN
Trigger: GTTCCTCCCACCTGTGCGGATGCCGACCCCGCTCCAGGGAGAGGAACAGTCGGACTCTGGCAGTGAGGGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CCA 72 bp GGGTGCTGCTGGTCTTCAAGGACGTGGGTCCTGTGCTaGAGCTGCCCAAGGCAGAGACCTGGCGCTGGATGG +
Preference number: 6 (lower is better)
Translates to: GCCWSSRTWVLC*SCPRQRPGAGW
Trigger: CCATCCAGCGCCAGGTCTCTGCCTTGGGCAGCTCCAGCACAGGACCCACGTCCTTGAAGACCAGCAGCACCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CCA 72 bp AACATACGCTTCCAGCTGCCGCCGTGCCTGGACACGTaGCACACGGACCAGCGCTTGATGCAGCAGCGGTGC +
Preference number: 6 (lower is better)
Translates to: NIRFQLPPCLDT*HTDQRLMQQRC
Trigger: GCACCGCTGCTGCATCAAGCGCTGGTCCGTGTGCCACGTGTCCAGGCACGGCGGCAGCTGGAAGCGTATGTT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CCA 72 bp GTGGGTGAGGAGAAGTGGCCAGGATTCAGGGTCCGCTaGCGGGCAGCCTCTCGGTTGGCATGCAGAACCTGG +
Preference number: 6 (lower is better)
Translates to: VGEEKWPGFRVR*RAASRLACRTW
Trigger: CCAGGTTCTGCATGCCAACCGAGAGGCTGCCCGCCAGCGGACCCTGAATCCTGGCCACTTCTCCTCACCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS GCA 72 bp TTCAGGGTCCGCTGGCGGGCAGCCTCTCGGTTGGCATaGAGAACCTGGCCAATGAGGTACTCGCTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: FRVRWRAASRLA*RTWPMRYSLSW
Trigger: CCAGGAGAGCGAGTACCTCATTGGCCAGGTTCTGCATGCCAACCGAGAGGCTGCCCGCCAGCGGACCCTGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 72 bp CCAGGATTCAGGGTCCGCTGGCGGGCAGCCTCTCGGTaGGCATGCAGAACCTGGCCAATGAGGTACTCGCTC +
Preference number: 6 (lower is better)
Translates to: PGFRVRWRAASR*ACRTWPMRYSL
Trigger: GAGCGAGTACCTCATTGGCCAGGTTCTGCATGCCAACCGAGAGGCTGCCCGCCAGCGGACCCTGAATCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 90 bp CTCAGCAGCTTAGCCGCTGCTCGTGCACCACGGTCTCCGATGAGGTaGTGGGATAAGTCCAGCTCCTCCAGGGCTGGGTGGTCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: LSSLAAARAPRSPMR*WDKSSSSRAGWSSR
Trigger: CCTGCTGGACCACCCAGCCCTGGAGGAGCTGGACTTATCCCACAACCTCATCGGAGACCGTGGTGCACGAGCAGCGGCTAAGCTGCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 90 bp GGCTCAGACAGCTTGTTGCCACCAAGGTGCAGCACGGAGAGGCACTaGTTGGTCTCCAGGGCGTGGGCGATTGCTTGGCCACCCTCGTCC +
Preference number: 6 (lower is better)
Translates to: GSDSLLPPRCSTERH*LVSRAWAIAWPPSS
Trigger: GGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAAGCTGTCTGAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 90 bp TCAGACAGCTTGTTGCCACCAAGGTGCAGCACGGAGAGGCACTTGTaGGTCTCCAGGGCGTGGGCGATTGCTTGGCCACCCTCGTCCTCG +
Preference number: 6 (lower is better)
Translates to: SDSLLPPRCSTERHL*VSRAWAIAWPPSSS
Trigger: CGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAAGCTGTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 90 bp GAGAAGTGGCCAGGATTCAGGGTCCGCTGGCGGGCAGCCTCTCGGTaGGCATGCAGAACCTGGCCAATGAGGTACTCGCTCTCCTGGGAT +
Preference number: 6 (lower is better)
Translates to: EKWPGFRVRWRAASR*ACRTWPMRYSLSWD
Trigger: ATCCCAGGAGAGCGAGTACCTCATTGGCCAGGTTCTGCATGCCAACCGAGAGGCTGCCCGCCAGCGGACCCTGAATCCTGGCCACTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS GCA 72 bp TCTCCAGGTGTCTCTCGAAGAACATACGCTTCCAGCTaGCGCCGTGCCTGGACACGTGGCACACGGACCAGC +
Preference number: 6 (lower is better)
Translates to: SPGVSRRTYASS*RRAWTRGTRTS
Trigger: GCTGGTCCGTGTGCCACGTGTCCAGGCACGGCGGCAGCTGGAAGCGTATGTTCTTCGAGAGACACCTGGAGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS GCA 72 bp GCATCCGCACAGGTGGGAGGAACTGGTCCACATGAATaGGGCGCACGTAGTTCCTGCAGAGGGGCAGCAGGT +
Preference number: 6 (lower is better)
Translates to: ASAQVGGTGPHE*GARSSCRGAAG
Trigger: ACCTGCTGCCCCTCTGCAGGAACTACGTGCGCCGCATTCATGTGGACCAGTTCCTCCCACCTGTGCGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS GCA 72 bp CACTCTCAGGCGACTGTGGCTCAGCAGCTTAGCCGCTaGTCGTGCACCACGGTCTCCGATGAGGTTGTGGGA +
Preference number: 6 (lower is better)
Translates to: HSQATVAQQLSR*SCTTVSDEVVG
Trigger: TCCCACAACCTCATCGGAGACCGTGGTGCACGAGCAGCGGCTAAGCTGCTGAGCCACAGTCGCCTGAGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS GCA 72 bp GGAGAGGCACTTGTTGGTCTCCAGGGCGTGGGCGATTaGTTGGCCACCCTCGTCCTCGATACAGTTGAGGCG +
Preference number: 6 (lower is better)
Translates to: GEALVGLQGVGD*LATLVLDTVEA
Trigger: CGCCTCAACTGTATCGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS GCA 72 bp GTGGCTGTGGGCTCAGACAGCTTGTTGCCACCAAGGTaGAGCACGGAGAGGCACTTGTTGGTCTCCAGGGCG +
Preference number: 6 (lower is better)
Translates to: VAVGSDSLLPPR*STERHLLVSRA
Trigger: CGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAAGCTGTCTGAGCCCACAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CCA 72 bp GCGACGGACATTTGGGACCTTGGTCTTCAGCTGGCCTaGGGTAGGGGTGCTGCTGGTCTTCAAGGACGTGGG +
Preference number: 6 (lower is better)
Translates to: ATDIWDLGLQLA*GRGAAGLQGRG
Trigger: CCCACGTCCTTGAAGACCAGCAGCACCCCTACCCCAGGCCAGCTGAAGACCAAGGTCCCAAATGTCCGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CCA 72 bp AGGCACTTGTTGGTCTCCAGGGCGTGGGCGATTGCTTaGCCACCCTCGTCCTCGATACAGTTGAGGCGGAGG +
Preference number: 6 (lower is better)
Translates to: RHLLVSRAWAIA*PPSSSIQLRRR
Trigger: CCTCCGCCTCAACTGTATCGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CCA 72 bp TGCAGCACGGAGAGGCACTTGTTGGTCTCCAGGGCGTaGGCGATTGCTTGGCCACCCTCGTCCTCGATACAG +
Preference number: 6 (lower is better)
Translates to: CSTERHLLVSRA*AIAWPPSSSIQ
Trigger: CTGTATCGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CCA 72 bp TGTTGCCACCAAGGTGCAGCACGGAGAGGCACTTGTTaGTCTCCAGGGCGTGGGCGATTGCTTGGCCACCCT +
Preference number: 6 (lower is better)
Translates to: CCHQGAARRGTC*SPGRGRLLGHP
Trigger: AGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 72 bp GAGGCACTTGTTGGTCTCCAGGGCGTGGGCGATTGCTaGGCCACCCTCGTCCTCGATACAGTTGAGGCGGAG +
Preference number: 6 (lower is better)
Translates to: EALVGLQGVGDC*ATLVLDTVEAE
Trigger: CTCCGCCTCAACTGTATCGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 72 bp TTGTTGCCACCAAGGTGCAGCACGGAGAGGCACTTGTaGGTCTCCAGGGCGTGGGCGATTGCTTGGCCACCC +
Preference number: 6 (lower is better)
Translates to: LLPPRCSTERHL*VSRAWAIAWPP
Trigger: GGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 90 bp CAGCACGGAGAGGCACTTGTTGGTCTCCAGGGCGTGGGCGATTGCTaGGCCACCCTCGTCCTCGATACAGTTGAGGCGGAGGTTGAGGAA +
Preference number: 6 (lower is better)
Translates to: QHGEALVGLQGVGDC*ATLVLDTVEAEVEE
Trigger: TTCCTCAACCTCCGCCTCAACTGTATCGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGAGACCAACAAGTGCCTCTCCGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS TCA 72 bp TGGAGCTGCCCAAGGCAGAGACCTGGCGCTGGATGGTaGGAACCGACTGGCTGTGAGACGAAGAGTTGGACG +
Preference number: 6 (lower is better)
Translates to: WSCPRQRPGAGW*EPTGCETKSWT
Trigger: CGTCCAACTCTTCGTCTCACAGCCAGTCGGTTCTCACCATCCAGCGCCAGGTCTCTGCCTTGGGCAGCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS TCA 72 bp CGCCGTGCCTGGACACGTGGCACACGGACCAGCGCTTaGTGCAGCAGCGGTGCCAGTAATTCTCATCGTCAA +
Preference number: 6 (lower is better)
Translates to: RRAWTRGTRTSA*CSSGASNSHRQ
Trigger: TTGACGATGAGAATTACTGGCACCGCTGCTGCATCAAGCGCTGGTCCGTGTGCCACGTGTCCAGGCACGGCG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS GCA 72 bp TGTCTCTCGAAGAACATACGCTTCCAGCTGCCGCCGTaGCTGGACACGTGGCACACGGACCAGCGCTTGATG +
Preference number: 6 (lower is better)
Translates to: CLSKNIRFQLPP*LDTWHTDQRLM
Trigger: CATCAAGCGCTGGTCCGTGTGCCACGTGTCCAGGCACGGCGGCAGCTGGAAGCGTATGTTCTTCGAGAGACA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS GCA 72 bp GGAACTGGTCCACATGAATGCGGCGCACGTAGTTCCTaGAGAGGGGCAGCAGGTCCAGGATCACGTTGGGGT +
Preference number: 6 (lower is better)
Translates to: GTGPHECGARSS*RGAAGPGSRWG
Trigger: ACCCCAACGTGATCCTGGACCTGCTGCCCCTCTGCAGGAACTACGTGCGCCGCATTCATGTGGACCAGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS GCA 72 bp CCAGGGCTGGGTGGTCCAGCAGGCTACGGATTAGGATaGGCGCCTTATCGTCGTCCACCTTACTTCGGGTCA +
Preference number: 6 (lower is better)
Translates to: PGLGGPAGYGLG*APYRRPPYFGS
Trigger: TGACCCGAAGTAAGGTGGACGACGATAAGGCGCGCATCCTAATCCGTAGCCTGCTGGACCACCCAGCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS GCA 72 bp GGGAGAGGAGTGTGGCTGTGGGCTCAGACAGCTTGTTaGCACCAAGGTGCAGCACGGAGAGGCACTTGTTGG +
Preference number: 6 (lower is better)
Translates to: GRGVWLWAQTAC*HQGAARRGTCW
Trigger: CCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAAGCTGTCTGAGCCCACAGCCACACTCCTCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CCA 72 bp CGCATGCGACGGACATTTGGGACCTTGGTCTTCAGCTaGCCTGGGGTAGGGGTGCTGCTGGTCTTCAAGGAC +
Preference number: 6 (lower is better)
Translates to: RMRRTFGTLVFS*PGVGVLLVFKD
Trigger: GTCCTTGAAGACCAGCAGCACCCCTACCCCAGGCCAGCTGAAGACCAAGGTCCCAAATGTCCGTCGCATGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 72 bp GAGATGATCCTGCGCATGCGACGGACATTTGGGACCTaGGTCTTCAGCTGGCCTGGGGTAGGGGTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: EMILRMRRTFGT*VFSWPGVGVLL
Trigger: CAGCAGCACCCCTACCCCAGGCCAGCTGAAGACCAAGGTCCCAAATGTCCGTCGCATGCGCAGGATCATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 90 bp GCATCCTCGGAGATGATCCTGCGCATGCGACGGACATTTGGGACCTaGGTCTTCAGCTGGCCTGGGGTAGGGGTGCTGCTGGTCTTCAAG +
Preference number: 6 (lower is better)
Translates to: ASSEMILRMRRTFGT*VFSWPGVGVLLVFK
Trigger: CTTGAAGACCAGCAGCACCCCTACCCCAGGCCAGCTGAAGACCAAGGTCCCAAATGTCCGTCGCATGCGCAGGATCATCTCCGAGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 90 bp TCCAGGGCGTGGGCGATTGCTTGGCCACCCTCGTCCTCGATACAGTaGAGGCGGAGGTTGAGGAAGACCAGGTTGGTGTTGTGTGCCAGT +
Preference number: 6 (lower is better)
Translates to: SRAWAIAWPPSSSIQ*RRRLRKTRLVLCAS
Trigger: ACTGGCACACAACACCAACCTGGTCTTCCTCAACCTCCGCCTCAACTGTATCGAGGACGAGGGTGGCCAAGCAATCGCCCACGCCCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 90 bp GTGAGCATCTGGGAGAGGAGTGTGGCTGTGGGCTCAGACAGCTTGTaGCCACCAAGGTGCAGCACGGAGAGGCACTTGTTGGTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: VSIWERSVAVGSDSL*PPRCSTERHLLVSR
Trigger: CCTGGAGACCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAAGCTGTCTGAGCCCACAGCCACACTCCTCTCCCAGATGCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS TCA 72 bp GGTCCAGGATCACGTTGGGGTCCGTGGTCCCCGGGATaGATAGCTTCAGCAGGTTCTCCAGGTGTCTCTCGA +
Preference number: 6 (lower is better)
Translates to: GPGSRWGPWSPG*IASAGSPGVSR
Trigger: TCGAGAGACACCTGGAGAACCTGCTGAAGCTATTCATCCCGGGGACCACGGACCCCAACGTGATCCTGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CCA 72 bp ATCCTCGGAGATGATCCTGCGCATGCGACGGACATTTaGGACCTTGGTCTTCAGCTGGCCTGGGGTAGGGGT +
Preference number: 6 (lower is better)
Translates to: ILGDDPAHATDI*DLGLQLAWGRG
Trigger: ACCCCTACCCCAGGCCAGCTGAAGACCAAGGTCCCAAATGTCCGTCGCATGCGCAGGATCATCTCCGAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 72 bp TGGCCACCCTCGTCCTCGATACAGTTGAGGCGGAGGTaGAGGAAGACCAGGTTGGTGTTGTGTGCCAGTGCG +
Preference number: 6 (lower is better)
Translates to: WPPSSSIQLRRR*RKTRLVLCASA
Trigger: CGCACTGGCACACAACACCAACCTGGTCTTCCTCAACCTCCGCCTCAACTGTATCGAGGACGAGGGTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 72 bp ATCTGGGAGAGGAGTGTGGCTGTGGGCTCAGACAGCTaGTTGCCACCAAGGTGCAGCACGGAGAGGCACTTG +
Preference number: 6 (lower is better)
Translates to: IWERSVAVGSDS*LPPRCSTERHL
Trigger: CAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAAGCTGTCTGAGCCCACAGCCACACTCCTCTCCCAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 90 bp ACAGTGAGCATCTGGGAGAGGAGTGTGGCTGTGGGCTCAGACAGCTaGTTGCCACCAAGGTGCAGCACGGAGAGGCACTTGTTGGTCTCC +
Preference number: 6 (lower is better)
Translates to: TVSIWERSVAVGSDS*LPPRCSTERHLLVS
Trigger: GGAGACCAACAAGTGCCTCTCCGTGCTGCACCTTGGTGGCAACAAGCTGTCTGAGCCCACAGCCACACTCCTCTCCCAGATGCTCACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS TCA 72 bp GTACGATGGCCAGTGACCACTCTGCATCCTCGGAGATaGTCCTGCGCATGCGACGGACATTTGGGACCTTGG +
Preference number: 6 (lower is better)
Translates to: VRWPVTTLHPRR*SCACDGHLGPW
Trigger: CCAAGGTCCCAAATGTCCGTCGCATGCGCAGGATCATCTCCGAGGATGCAGAGTGGTCACTGGCCATCGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS TCA 72 bp GGGCAGCCTCTCGGTTGGCATGCAGAACCTGGCCAATaGGGTACTCGCTCTCCTGGGATACATCTGACAGTC +
Preference number: 6 (lower is better)
Translates to: GQPLGWHAEPGQ*GTRSPGIHLTV
Trigger: GACTGTCAGATGTATCCCAGGAGAGCGAGTACCTCATTGGCCAGGTTCTGCATGCCAACCGAGAGGCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 72 bp TGGGCGATTGCTTGGCCACCCTCGTCCTCGATACAGTaGAGGCGGAGGTTGAGGAAGACCAGGTTGGTGTTG +
Preference number: 6 (lower is better)
Translates to: WAIAWPPSSSIQ*RRRLRKTRLVL
Trigger: CAACACCAACCTGGTCTTCCTCAACCTCCGCCTCAACTGTATCGAGGACGAGGGTGGCCAAGCAATCGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 90 bp TGCCCAATGTGGTTGCAGGATAGGTTGAGGCTGACGAGCGTAGTGTaGACAGTGAGCATCTGGGAGAGGAGTGTGGCTGTGGGCTCAGAC +
Preference number: 6 (lower is better)
Translates to: CPMWLQDRLRLTSVV*TVSIWERSVAVGSD
Trigger: GTCTGAGCCCACAGCCACACTCCTCTCCCAGATGCTCACTGTCAACACTACGCTCGTCAGCCTCAACCTATCCTGCAACCACATTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CCA 72 bp GAATTCTCAGTACAGTTGTTAGTGGGTGAGGAGAAGTaGCCAGGATTCAGGGTCCGCTGGCGGGCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: EFSVQLLVGEEK*PGFRVRWRAAS
Trigger: AGAGGCTGCCCGCCAGCGGACCCTGAATCCTGGCCACTTCTCCTCACCCACTAACAACTGTACTGAGAATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 90 bp AGGAGTTGCTTCCCACCATCCTGCCCAATGTGGTTGCAGGATAGGTaGAGGCTGACGAGCGTAGTGTTGACAGTGAGCATCTGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: RSCFPPSCPMWLQDR*RLTSVVLTVSIWER
Trigger: CCTCTCCCAGATGCTCACTGTCAACACTACGCTCGTCAGCCTCAACCTATCCTGCAACCACATTGGGCAGGATGGTGGGAAGCAACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 72 bp TGGTTGCAGGATAGGTTGAGGCTGACGAGCGTAGTGTaGACAGTGAGCATCTGGGAGAGGAGTGTGGCTGTG +
Preference number: 6 (lower is better)
Translates to: WLQDRLRLTSVV*TVSIWERSVAV
Trigger: CACAGCCACACTCCTCTCCCAGATGCTCACTGTCAACACTACGCTCGTCAGCCTCAACCTATCCTGCAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 72 bp TCCAGGAGTTGCTTCCCACCATCCTGCCCAATGTGGTaGCAGGATAGGTTGAGGCTGACGAGCGTAGTGTTG +
Preference number: 6 (lower is better)
Translates to: SRSCFPPSCPMW*QDRLRLTSVVL
Trigger: CAACACTACGCTCGTCAGCCTCAACCTATCCTGCAACCACATTGGGCAGGATGGTGGGAAGCAACTCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 90 bp GATATGCCTTCCAGGAGTTGCTTCCCACCATCCTGCCCAATGTGGTaGCAGGATAGGTTGAGGCTGACGAGCGTAGTGTTGACAGTGAGC +
Preference number: 6 (lower is better)
Translates to: DMPSRSCFPPSCPMW*QDRLRLTSVVLTVS
Trigger: GCTCACTGTCAACACTACGCTCGTCAGCCTCAACCTATCCTGCAACCACATTGGGCAGGATGGTGGGAAGCAACTCCTGGAAGGCATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CCA 72 bp GCATGCAGAACCTGGCCAATGAGGTACTCGCTCTCCTaGGATACATCTGACAGTCGCAGGTCGAACTCTAGA +
Preference number: 6 (lower is better)
Translates to: ACRTWPMRYSLS*DTSDSRRSNSR
Trigger: TCTAGAGTTCGACCTGCGACTGTCAGATGTATCCCAGGAGAGCGAGTACCTCATTGGCCAGGTTCTGCATGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 72 bp CGCGCCTTATCGTCGTCCACCTTACTTCGGGTCAGCTaGAAGATCTTGAGGGTGTGGCAAGCTTTGATGGTG +
Preference number: 6 (lower is better)
Translates to: RALSSSTLLRVS*KILRVWQALMV
Trigger: CACCATCAAAGCTTGCCACACCCTCAAGATCTTCAAGCTGACCCGAAGTAAGGTGGACGACGATAAGGCGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 72 bp TTCCCACCATCCTGCCCAATGTGGTTGCAGGATAGGTaGAGGCTGACGAGCGTAGTGTTGACAGTGAGCATC +
Preference number: 6 (lower is better)
Translates to: FPPSCPMWLQDR*RLTSVVLTVSI
Trigger: GATGCTCACTGTCAACACTACGCTCGTCAGCCTCAACCTATCCTGCAACCACATTGGGCAGGATGGTGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS TCA 72 bp AATGCAGAGTTCTGTAAGGAGAGGTACGATGGCCAGTaGCCACTCTGCATCCTCGGAGATGATCCTGCGCAT +
Preference number: 6 (lower is better)
Translates to: NAEFCKERYDGQ*PLCILGDDPAH
Trigger: ATGCGCAGGATCATCTCCGAGGATGCAGAGTGGTCACTGGCCATCGTACCTCTCCTTACAGAACTCTGCATT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 90 bp TGGGATACATCTGACAGTCGCAGGTCGAACTCTAGAATGGTCTTGTaGTCTGATATGCCTTCCAGGAGTTGCTTCCCACCATCCTGCCCA +
Preference number: 6 (lower is better)
Translates to: WDTSDSRRSNSRMVL*SDMPSRSCFPPSCP
Trigger: TGGGCAGGATGGTGGGAAGCAACTCCTGGAAGGCATATCAGACAACAAGACCATTCTAGAGTTCGACCTGCGACTGTCAGATGTATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 90 bp TCCTGGGATACATCTGACAGTCGCAGGTCGAACTCTAGAATGGTCTaGTTGTCTGATATGCCTTCCAGGAGTTGCTTCCCACCATCCTGC +
Preference number: 6 (lower is better)
Translates to: SWDTSDSRRSNSRMV*LSDMPSRSCFPPSC
Trigger: GCAGGATGGTGGGAAGCAACTCCTGGAAGGCATATCAGACAACAAGACCATTCTAGAGTTCGACCTGCGACTGTCAGATGTATCCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS GCA 72 bp GAAGATCTTGAGGGTGTGGCAAGCTTTGATGGTGGCTaGCAGAGAGTAGCAGTCTCGGTAGGTGAAGAGAAA +
Preference number: 6 (lower is better)
Translates to: EDLEGVASFDGG*QRVAVSVGEEK
Trigger: TTTCTCTTCACCTACCGAGACTGCTACTCTCTGGCAGCCACCATCAAAGCTTGCCACACCCTCAAGATCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS GCA 72 bp GCAGGTCGAACTCTAGAATGGTCTTGTTGTCTGATATaGCTTCCAGGAGTTGCTTCCCACCATCCTGCCCAA +
Preference number: 6 (lower is better)
Translates to: AGRTLEWSCCLI*LPGVASHHPAQ
Trigger: TTGGGCAGGATGGTGGGAAGCAACTCCTGGAAGGCATATCAGACAACAAGACCATTCTAGAGTTCGACCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS GCA 72 bp TTGCTCAAGACCTTCTTTTGGTGCTCTAGCGGCAGCTaGTTCAGGATAGGGTTGTTCTGGAAGTTCTTGACG +
Preference number: 6 (lower is better)
Translates to: LLKTFFWCSSGS*FRIGLFWKFLT
Trigger: CGTCAAGAACTTCCAGAACAACCCTATCCTGAAGCAGCTGCCGCTAGAGCACCAAAAGAAGGTCTTGAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 72 bp TCTGACAGTCGCAGGTCGAACTCTAGAATGGTCTTGTaGTCTGATATGCCTTCCAGGAGTTGCTTCCCACCA +
Preference number: 6 (lower is better)
Translates to: SDSRRSNSRMVL*SDMPSRSCFPP
Trigger: TGGTGGGAAGCAACTCCTGGAAGGCATATCAGACAACAAGACCATTCTAGAGTTCGACCTGCGACTGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CCA 72 bp GGGATACATCTGACAGTCGCAGGTCGAACTCTAGAATaGTCTTGTTGTCTGATATGCCTTCCAGGAGTTGCT +
Preference number: 6 (lower is better)
Translates to: GIHLTVAGRTLE*SCCLICLPGVA
Trigger: AGCAACTCCTGGAAGGCATATCAGACAACAAGACCATTCTAGAGTTCGACCTGCGACTGTCAGATGTATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 72 bp ACATCTGACAGTCGCAGGTCGAACTCTAGAATGGTCTaGTTGTCTGATATGCCTTCCAGGAGTTGCTTCCCA +
Preference number: 6 (lower is better)
Translates to: TSDSRRSNSRMV*LSDMPSRSCFP
Trigger: TGGGAAGCAACTCCTGGAAGGCATATCAGACAACAAGACCATTCTAGAGTTCGACCTGCGACTGTCAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS TCA 72 bp AGGATAGGGTTGTTCTGGAAGTTCTTGACGATATGTTaGATGCAGAGTTCTGTAAGGAGAGGTACGATGGCC +
Preference number: 6 (lower is better)
Translates to: RIGLFWKFLTIC*MQSSVRRGTMA
Trigger: GGCCATCGTACCTCTCCTTACAGAACTCTGCATTCAACATATCGTCAAGAACTTCCAGAACAACCCTATCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2
CDS CAA 72 bp CAGGATAGGGTTGTTCTGGAAGTTCTTGACGATATGTaGAATGCAGAGTTCTGTAAGGAGAGGTACGATGGC +
Preference number: 6 (lower is better)
Translates to: QDRVVLEVLDDM*NAEFCKERYDG
Trigger: GCCATCGTACCTCTCCTTACAGAACTCTGCATTCAACATATCGTCAAGAACTTCCAGAACAACCCTATCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000113547.2
ENSMUST00000233588.2