Pregenerated sensors for TCTA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039461Ensembl transcript IDs: ENSMUST00000044725.9, ENSMUST00000192886.6, ENSMUST00000195615.2
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGAAGCTGTTGGAGGCAAGGCTGAGGGCAGTGGAGGCTCACCCTaGAAGCATCATGGTACTCCAGTCCCCCAACCCCAAGCCCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: PEAVGGKAEGSGGSP*KHHGTPVPQPQALC Trigger: GCAGAGGGCTTGGGGTTGGGGGACTGGAGTACCATGATGCTTCCAGGGTGAGCCTCCACTGCCCTCAGCCTTGCCTCCAACAGCTTCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 |
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| 3UTR TCA 90 bp | GGGACACTGGCTACCCACCACCTTGGAACCTCTTCTGACCCATGGTaGAGGGCCCAGAGCTATCTGGCTTGTGGCTTGCTCTTACTGCTA | + |
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Preference number: 1 (lower is better) Translates to: GTLATHHLGTSSDPW*RAQSYLACGLLLLL Trigger: TAGCAGTAAGAGCAAGCCACAAGCCAGATAGCTCTGGGCCCTTCACCATGGGTCAGAAGAGGTTCCAAGGTGGTGGGTAGCCAGTGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044725.9 |
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| 3UTR TCA 90 bp | TCAGTGGGTGGGCATGAGGCTGTGAAGAACATCTTGCCACACAGATaGCATCTCTGGAGTAGGTGCACGTGCACGAGGCGCTCAGTACAG | + |
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Preference number: 1 (lower is better) Translates to: SVGGHEAVKNILPHR*HLWSRCTCTRRSVQ Trigger: CTGTACTGAGCGCCTCGTGCACGTGCACCTACTCCAGAGATGTCATCTGTGTGGCAAGATGTTCTTCACAGCCTCATGCCCACCCACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044725.9 |
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| 3UTR CCA 90 bp | CCAGGGAGGGACAGGTTTGGTGCCCTAATCCAGGCCAGGATTAGCTaGCTTTTTGCCTACGAAGCAAAGCCAAGAAAGTCAGAGTCTATG | + |
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Preference number: 1 (lower is better) Translates to: PGRDRFGALIQARIS*LFAYEAKPRKSESM Trigger: CATAGACTCTGACTTTCTTGGCTTTGCTTCGTAGGCAAAAAGCCAGCTAATCCTGGCCTGGATTAGGGCACCAAACCTGTCCCTCCCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 |
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| 3UTR TCA 90 bp | CACCTGCTAAAAGTCTCAGTAGGCAATGGCTGCCAGATGGCTATATaGCATCTAACAAAGAGACAGTGGACACCTGAGGTAGCTAGTAGC | + |
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Preference number: 1 (lower is better) Translates to: HLLKVSVGNGCQMAI*HLTKRQWTPEVASS Trigger: GCTACTAGCTACCTCAGGTGTCCACTGTCTCTTTGTTAGATGTCATATAGCCATCTGGCAGCCATTGCCTACTGAGACTTTTAGCAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044725.9 |
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| 3UTR CCA 90 bp | GTACAGTTCACCTATAGTACACCTGCTAAAAGTCTCAGTAGGCAATaGCTGCCAGATGGCTATATGACATCTAACAAAGAGACAGTGGAC | + |
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Preference number: 1 (lower is better) Translates to: VQFTYSTPAKSLSRQ*LPDGYMTSNKETVD Trigger: GTCCACTGTCTCTTTGTTAGATGTCATATAGCCATCTGGCAGCCATTGCCTACTGAGACTTTTAGCAGGTGTACTATAGGTGAACTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044725.9 |
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| 3UTR TCA 90 bp | GGACCACTGACCTCCTCAACCAAAATGTTTCTAAGCAATGACCCTTaGCAAGAAGTCTTTCCTTTTGTTAAGAGACAAACTTCACCTGCC | + |
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Preference number: 1 (lower is better) Translates to: GPLTSSTKMFLSNDP*QEVFPFVKRQTSPA Trigger: GGCAGGTGAAGTTTGTCTCTTAACAAAAGGAAAGACTTCTTGTCAAGGGTCATTGCTTAGAAACATTTTGGTTGAGGAGGTCAGTGGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 ENSMUST00000195615.2 |
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| 3UTR CCA 90 bp | TTAGGAATTCAACTTGTCCTCAAAAAGAACAGAGAAACAAGTCAGTaGGAAATGATAACTTCCTCTGCCTGCCTCAGACCTAAAAGATTG | + |
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Preference number: 1 (lower is better) Translates to: LGIQLVLKKNRETSQ*EMITSSACLRPKRL Trigger: CAATCTTTTAGGTCTGAGGCAGGCAGAGGAAGTTATCATTTCCCACTGACTTGTTTCTCTGTTCTTTTTGAGGACAAGTTGAATTCCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044725.9 |
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| 3UTR-3UTR TCA 90 bp | GATTGTAGCTTGGCCAGGGAGGGACAGGTTTGGTGCCCTAATCCAGGCCAGGATCACCTGCCCAGTACCTaGAGCTGTTGGAGGCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: DCSLAREGQVWCPNPGQDHLPST*SCWRQG Trigger: GCCTTGCCTCCAACAGCTTCAGGTACTGGGCAGGTG...ATCCTGGCCTGGATTAGGGCACCAAACCTGTCCCTCCCTGGCCAAGCTACAATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 |
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| 3UTR CAA 90 bp | CCTTTTGTTAAGAGACAAACTTCACCTGCCCAGTACCTGAAGCTGTaGGAGGCAAGGCTGAGGGCAGTGGAGGCTCACCCTGGAAGCATC | + |
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Preference number: 2 (lower is better) Translates to: PFVKRQTSPAQYLKL*EARLRAVEAHPGSI Trigger: GATGCTTCCAGGGTGAGCCTCCACTGCCCTCAGCCTTGCCTCCAACAGCTTCAGGTACTGGGCAGGTGAAGTTTGTCTCTTAACAAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTGCCTCAGACCTAAAAGATTGTAGCTTGGCCAGGGAGGGACAGGTTTGGAGTGGAGGCTCACCCTaGAAGCATCATGGTACTCCA | + |
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Preference number: 2 (lower is better) Translates to: LPASDLKDCSLAREGQVWSGGSP*KHHGTP Trigger: TGGAGTACCATGATGCTTCCAGGGTGAGCCTCCACT...CCAAACCTGTCCCTCCCTGGCCAAGCTACAATCTTTTAGGTCTGAGGCAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 |
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| 3UTR-3UTR TCA 90 bp | TTAGCTGGCTTTTTGCCTACGAAGCAAAGCCAAGAAAGTCAGAGTCTATGGGAGCACCTGCCCAGTACCTaGAGCTGTTGGAGGCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: LAGFLPTKQSQESQSLWEHLPST*SCWRQG Trigger: GCCTTGCCTCCAACAGCTTCAGGTACTGGGCAGGTG...CTCCCATAGACTCTGACTTTCTTGGCTTTGCTTCGTAGGCAAAAAGCCAGCTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 |
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| 3UTR-3UTR TCA 90 bp | GCAAAGCCAAGAAAGTCAGAGTCTATGGGAGAACTGGCTTTCTTTCTAAATCTCTGTTGGAGGCAAGGCTaGGGGCAGTGGAGGCTCACC | + |
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Preference number: 2 (lower is better) Translates to: AKPRKSESMGELAFFLNLCWRQG*GQWRLT Trigger: GGTGAGCCTCCACTGCCCTCAGCCTTGCCTCCAACA...GAGATTTAGAAAGAAAGCCAGTTCTCCCATAGACTCTGACTTTCTTGGCTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 |
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| 3UTR-3UTR GCA 90 bp | GCCTACGAAGCAAAGCCAAGAAAGTCAGAGTCTATGGGAGAACTGGCTTTCTTTCAACCCCAAGCCCTCTaGAGTTGTCCAAGGGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: AYEAKPRKSESMGELAFFQPQAL*SCPRGL Trigger: CAGACCCCTTGGACAACTGCAGAGGGCTTGGGGTTG...AAAGAAAGCCAGTTCTCCCATAGACTCTGACTTTCTTGGCTTTGCTTCGTAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 |
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| 3UTR-3UTR TCA 90 bp | ACCAAGGCTCTTAGTGAGATGTCTCTTAGGAATTCAACTTGTCCTCAAAAAGAATGTTGGAGGCAAGGCTaGGGGCAGTGGAGGCTCACC | + |
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Preference number: 2 (lower is better) Translates to: TKALSEMSLRNSTCPQKECWRQG*GQWRLT Trigger: GGTGAGCCTCCACTGCCCTCAGCCTTGCCTCCAACA...TTCTTTTTGAGGACAAGTTGAATTCCTAAGAGACATCTCACTAAGAGCCTTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044725.9 |
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| 3UTR-3UTR CCA 90 bp | CCAAGAAAGTCAGAGTCTATGGGAGAACTGGCTTTCTTTCTAAATCTCAGAACTACCCAGCGATATCTCTaGAGACCCTTCTGCTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: PRKSESMGELAFFLNLRTTQRYL*RPFCCC Trigger: GCAGCAGCAGAAGGGTCTCCAGAGATATCGCTGGGT...AGTTCTGAGATTTAGAAAGAAAGCCAGTTCTCCCATAGACTCTGACTTTCTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 |
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| 3UTR-3UTR TCA 90 bp | TTGCCTACGAAGCAAAGCCAAGAAAGTCAGAGTCTATGGGAGAACTGGCTTTCTCTAAGCAATGACCCTTaGCAAGAAGTCTTTCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: LPTKQSQESQSLWENWLSLSNDP*QEVFPF Trigger: AAAAGGAAAGACTTCTTGTCAAGGGTCATTGCTTAG...AGAAAGCCAGTTCTCCCATAGACTCTGACTTTCTTGGCTTTGCTTCGTAGGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 |
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| 3UTR CCA 72 bp | GTTGGAGGCAAGGCTGAGGGCAGTGGAGGCTCACCCTaGAAGCATCATGGTACTCCAGTCCCCCAACCCCAA | + |
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Preference number: 3 (lower is better) Translates to: VGGKAEGSGGSP*KHHGTPVPQPQ Trigger: TTGGGGTTGGGGGACTGGAGTACCATGATGCTTCCAGGGTGAGCCTCCACTGCCCTCAGCCTTGCCTCCAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 |
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| 3UTR TCA 72 bp | GGGGACACTGGCTACCCACCACCTTGGAACCTCTTCTaGCCCATGGTGAAGGGCCCAGAGCTATCTGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: GDTGYPPPWNLF*PMVKGPELSGL Trigger: CAAGCCAGATAGCTCTGGGCCCTTCACCATGGGTCAGAAGAGGTTCCAAGGTGGTGGGTAGCCAGTGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044725.9 |
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| 3UTR TCA 72 bp | GCTACCCACCACCTTGGAACCTCTTCTGACCCATGGTaGAGGGCCCAGAGCTATCTGGCTTGTGGCTTGCTC | + |
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Preference number: 3 (lower is better) Translates to: ATHHLGTSSDPW*RAQSYLACGLL Trigger: GAGCAAGCCACAAGCCAGATAGCTCTGGGCCCTTCACCATGGGTCAGAAGAGGTTCCAAGGTGGTGGGTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044725.9 |
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| 3UTR CCA 72 bp | CCCAACCCCAAGCCCTCTGCAGTTGTCCAAGGGGTCTaGACAGCAGCAACAAATAGCATAGGAGCCAGCGGA | + |
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Preference number: 3 (lower is better) Translates to: PNPKPSAVVQGV*TAATNSIGASG Trigger: TCCGCTGGCTCCTATGCTATTTGTTGCTGCTGTCCAGACCCCTTGGACAACTGCAGAGGGCTTGGGGTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 |
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| 3UTR TCA 72 bp | GGGCATGAGGCTGTGAAGAACATCTTGCCACACAGATaGCATCTCTGGAGTAGGTGCACGTGCACGAGGCGC | + |
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Preference number: 3 (lower is better) Translates to: GHEAVKNILPHR*HLWSRCTCTRR Trigger: GCGCCTCGTGCACGTGCACCTACTCCAGAGATGTCATCTGTGTGGCAAGATGTTCTTCACAGCCTCATGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044725.9 |
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| 3UTR TCA 72 bp | GGCTTGTGGCTTGCTCTTACTGCTATTCCTAGAGGCTaGAATGAGGCTGGTGGACTCTCAGGACTAGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: GLWLALTAIPRG*NEAGGLSGLGP Trigger: AGGGCCTAGTCCTGAGAGTCCACCAGCCTCATTTCAGCCTCTAGGAATAGCAGTAAGAGCAAGCCACAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044725.9 |
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| 3UTR-3UTR CAA 90 bp | CTGAGGAAGTGGTGTTTTCATGGGGACACTGGCTACCCACCACCTTGGAACCTCTATCTGGCTTGTGGCTaGCTCTTACTGCTATTCCTA | + |
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Preference number: 3 (lower is better) Translates to: LRKWCFHGDTGYPPPWNLYLACG*LLLLFL Trigger: TAGGAATAGCAGTAAGAGCAAGCCACAAGCCAGATA...GAGGTTCCAAGGTGGTGGGTAGCCAGTGTCCCCATGAAAACACCACTTCCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044725.9 |
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| 3UTR TCA 72 bp | AAAGTCTCAGTAGGCAATGGCTGCCAGATGGCTATATaGCATCTAACAAAGAGACAGTGGACACCTGAGGTA | + |
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Preference number: 3 (lower is better) Translates to: KVSVGNGCQMAI*HLTKRQWTPEV Trigger: TACCTCAGGTGTCCACTGTCTCTTTGTTAGATGTCATATAGCCATCTGGCAGCCATTGCCTACTGAGACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044725.9 |
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| 3UTR CCA 72 bp | TATGGGAGAACTGGCTTTCTTTCTAAATCTCAGAACTaGCCAACCTCGAGATTCCTCTTAGAAGGACCAATT | + |
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Preference number: 3 (lower is better) Translates to: YGRTGFLSKSQN*PTSRFLLEGPI Trigger: AATTGGTCCTTCTAAGAGGAATCTCGAGGTTGGCCAGTTCTGAGATTTAGAAAGAAAGCCAGTTCTCCCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 |
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| 3UTR CCA 72 bp | ACCTATAGTACACCTGCTAAAAGTCTCAGTAGGCAATaGCTGCCAGATGGCTATATGACATCTAACAAAGAG | + |
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Preference number: 3 (lower is better) Translates to: TYSTPAKSLSRQ*LPDGYMTSNKE Trigger: CTCTTTGTTAGATGTCATATAGCCATCTGGCAGCCATTGCCTACTGAGACTTTTAGCAGGTGTACTATAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044725.9 |
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| CDS-3UTR CCA 90 bp | GAGGGCAGTGGAGGCTCACCCTGGAAGCATCATGGTACTCCAGTCCCCCAACCCCTGGCCACCCAGACCTaGACGGTGATACAACCCGGT | + |
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Preference number: 4 (lower is better) Translates to: EGSGGSPWKHHGTPVPQPLATQT*TVIQPG Trigger: ACCGGGTTGTATCACCGTCCAGGTCTGGGTGGCCAG...GGGTTGGGGGACTGGAGTACCATGATGCTTCCAGGGTGAGCCTCCACTGCCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192886.6 |
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| CDS-3UTR TCA 90 bp | CTGCCTGCCTCAGACCTAAAAGATTGTAGCTTGGCCAGGGAGGGACAGGTTTGGATAGCTGCAGGAGGCTaGGGGTGGGGATCTGGACGG | + |
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Preference number: 4 (lower is better) Translates to: LPASDLKDCSLAREGQVWIAAGG*GWGSGR Trigger: CCGTCCAGATCCCCACCCTCAGCCTCCTGCAGCTAT...CCAAACCTGTCCCTCCCTGGCCAAGCTACAATCTTTTAGGTCTGAGGCAGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044725.9 |
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| CDS-3UTR CCA 90 bp | TCACCTGCCCAGTACCTGAAGCTGTTGGAGGCAAGGCTGAGGGCAGTGGAGGCTTGGAGCCATCAGGTGTaGATCCATTCTGGCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: SPAQYLKLLEARLRAVEAWSHQV*IHSGHP Trigger: TGGGTGGCCAGAATGGATCCACACCTGATGGCTCCA...AGCCTCCACTGCCCTCAGCCTTGCCTCCAACAGCTTCAGGTACTGGGCAGGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 ENSMUST00000195615.2 |
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| CDS-3UTR TCA 90 bp | TGCCCAGTACCTGAAGCTGTTGGAGGCAAGGCTGAGGGCAGTGGAGGCTCACCCTGCTGCTATCTCCCATaGAGAGAAATGTGTGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: CPVPEAVGGKAEGSGGSPCCYLP*REMCGA Trigger: GGCTCCACACATTTCTCTTCATGGGAGATAGCAGCA...GGGTGAGCCTCCACTGCCCTCAGCCTTGCCTCCAACAGCTTCAGGTACTGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 |
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| CDS-3UTR TCA 90 bp | TCACCTGCCCAGTACCTGAAGCTGTTGGAGGCAAGGCTGAGGGCAGTGGAGGCTCTTCTGCTGCTGCCATaGAGAGAAATGTGTGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: SPAQYLKLLEARLRAVEALLLLP*REMCGA Trigger: GGCTCCACACATTTCTCTTCATGGCAGCAGCAGAAG...AGCCTCCACTGCCCTCAGCCTTGCCTCCAACAGCTTCAGGTACTGGGCAGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195615.2 |
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| CDS-3UTR GCA 90 bp | ACAAACTTCACCTGCCCAGTACCTGAAGCTGTTGGAGGCAAGGCTGAGGGCAGTGTGGCGGGCAAAGCTTaGAGAAACTGCCCGGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: TNFTCPVPEAVGGKAEGSVAGKA*RNCPAQ Trigger: TTGGGCCGGGCAGTTTCTGCAAGCTTTGCCCGCCAC...ACTGCCCTCAGCCTTGCCTCCAACAGCTTCAGGTACTGGGCAGGTGAAGTTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 ENSMUST00000195615.2 |
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| CDS-3UTR TCA 90 bp | TCACCTGCCCAGTACCTGAAGCTGTTGGAGGCAAGGCTGAGGGCAGTGGAGGCTTGCTGCTATCTCCCATaGAGAGAAATGTGTGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: SPAQYLKLLEARLRAVEACCYLP*REMCGA Trigger: GGCTCCACACATTTCTCTTCATGGGAGATAGCAGCA...AGCCTCCACTGCCCTCAGCCTTGCCTCCAACAGCTTCAGGTACTGGGCAGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 |
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| CDS-3UTR GCA 90 bp | GCCCAGTACCTGAAGCTGTTGGAGGCAAGGCTGAGGGCAGTGGAGGCTCACCCTAGACCCTTCTGCTGCTaGCATGAAGAGAAATGTGTG | + |
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Preference number: 4 (lower is better) Translates to: AQYLKLLEARLRAVEAHPRPFCC*HEEKCV Trigger: CACACATTTCTCTTCATGGCAGCAGCAGAAGGGTCT...AGGGTGAGCCTCCACTGCCCTCAGCCTTGCCTCCAACAGCTTCAGGTACTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195615.2 |
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| 3UTR CAA 72 bp | GTGGTGTTTTCATGGGGACACTGGCTACCCACCACCTaGGAACCTCTTCTGACCCATGGTGAAGGGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: VVFSWGHWLPTT*EPLLTHGEGPR Trigger: TCTGGGCCCTTCACCATGGGTCAGAAGAGGTTCCAAGGTGGTGGGTAGCCAGTGTCCCCATGAAAACACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044725.9 |
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| CDS-3UTR GCA 90 bp | CAGTACCTGAAGCTGTTGGAGGCAAGGCTGAGGGCAGTGGAGGCTCACCCTGGATGGAGACCCTTCTGCTaGTGCCATGAAGAGAAATGT | + |
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Preference number: 4 (lower is better) Translates to: QYLKLLEARLRAVEAHPGWRPFC*CHEEKC Trigger: ACATTTCTCTTCATGGCAGCAGCAGAAGGGTCTCCA...TCCAGGGTGAGCCTCCACTGCCCTCAGCCTTGCCTCCAACAGCTTCAGGTACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195615.2 |
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| CDS-3UTR GCA 90 bp | AGTCAGGAAAAAGCCAAGGTGAGAAAGGGACCACTGACCTCCTCAACCAAAATGGTGGCGGGCAAAGCTTaGAGAAACTGCCCGGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: SQEKAKVRKGPLTSSTKMVAGKA*RNCPAQ Trigger: TTGGGCCGGGCAGTTTCTGCAAGCTTTGCCCGCCAC...CATTTTGGTTGAGGAGGTCAGTGGTCCCTTTCTCACCTTGGCTTTTTCCTGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 ENSMUST00000195615.2 |
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| CDS-3UTR GCA 90 bp | TTAGCTGGCTTTTTGCCTACGAAGCAAAGCCAAGAAAGTCAGAGTCTATGGGAGGAACACACCCATAGCTaGAGGAGGCTGAGGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: LAGFLPTKQSQESQSLWEEHTHS*RRLRVG Trigger: CCCCACCCTCAGCCTCCTGCAGCTATGGGTGTGTTC...CTCCCATAGACTCTGACTTTCTTGGCTTTGCTTCGTAGGCAAAAAGCCAGCTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044725.9 |
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| CDS-3UTR GCA 90 bp | CTACGAAGCAAAGCCAAGAAAGTCAGAGTCTATGGGAGAACTGGCTTTCTTTCTGTGGCGGGCAAAGCTTaGAGAAACTGCCCGGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: LRSKAKKVRVYGRTGFLSVAGKA*RNCPAQ Trigger: TTGGGCCGGGCAGTTTCTGCAAGCTTTGCCCGCCAC...AGAAAGAAAGCCAGTTCTCCCATAGACTCTGACTTTCTTGGCTTTGCTTCGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 |
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| CDS-3UTR GCA 90 bp | AAGTCAGGAAAAAGCCAAGGTGAGAAAGGGACCACTGACCTCCTCAACCAAAATCAACCCCAAGCCCTCTaGAGTTGTCCAAGGGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: KSGKSQGEKGTTDLLNQNQPQAL*SCPRGL Trigger: CAGACCCCTTGGACAACTGCAGAGGGCTTGGGGTTG...ATTTTGGTTGAGGAGGTCAGTGGTCCCTTTCTCACCTTGGCTTTTTCCTGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000195615.2 |
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| CDS-3UTR CCA 90 bp | GCCTACGAAGCAAAGCCAAGAAAGTCAGAGTCTATGGGAGAACTGGCTTTCTTTCTGAGGGTGGGGATCTaGACGGTGATACAACCCGGT | + |
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Preference number: 4 (lower is better) Translates to: AYEAKPRKSESMGELAFFLRVGI*TVIQPG Trigger: ACCGGGTTGTATCACCGTCCAGATCCCCACCCTCAG...AAAGAAAGCCAGTTCTCCCATAGACTCTGACTTTCTTGGCTTTGCTTCGTAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044725.9 |
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| CDS-3UTR CCA 90 bp | AGTCAGGAAAAAGCCAAGGTGAGAAAGGGACCACTGACCTCCTCAACCAAAATGACCCAGCGATATCTCTaGAGACCCTTCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SQEKAKVRKGPLTSSTKMTQRYL*RPFCCC Trigger: GCAGCAGCAGAAGGGTCTCCAGAGATATCGCTGGGT...CATTTTGGTTGAGGAGGTCAGTGGTCCCTTTCTCACCTTGGCTTTTTCCTGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195615.2 |
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| CDS-3UTR TCA 90 bp | GCAAAGCCAAGAAAGTCAGAGTCTATGGGAGAACTGGCTTTCTTTCTAAATCTCCCCAGACCTGGACGGTaGTACAACCCGGTCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: AKPRKSESMGELAFFLNLPRPGR*YNPVTV Trigger: CACAGTGACCGGGTTGTATCACCGTCCAGGTCTGGG...GAGATTTAGAAAGAAAGCCAGTTCTCCCATAGACTCTGACTTTCTTGGCTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192886.6 |
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| CDS-3UTR CCA 90 bp | GCCTACGAAGCAAAGCCAAGAAAGTCAGAGTCTATGGGAGAACTGGCTTTCTTTTGGAGCCATCAGGTGTaGATCCATTCTGGCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: AYEAKPRKSESMGELAFFWSHQV*IHSGHP Trigger: TGGGTGGCCAGAATGGATCCACACCTGATGGCTCCA...AAAGAAAGCCAGTTCTCCCATAGACTCTGACTTTCTTGGCTTTGCTTCGTAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 |
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| CDS-3UTR CCA 90 bp | TTGCCTACGAAGCAAAGCCAAGAAAGTCAGAGTCTATGGGAGAACTGGCTTTCTTGGAGCCATCAGGTGTaGATCCATTCTGGCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: LPTKQSQESQSLWENWLSWSHQV*IHSGHP Trigger: TGGGTGGCCAGAATGGATCCACACCTGATGGCTCCA...AGAAAGCCAGTTCTCCCATAGACTCTGACTTTCTTGGCTTTGCTTCGTAGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 |
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| CDS-3UTR TCA 90 bp | GCAAAGCCAAGAAAGTCAGAGTCTATGGGAGAACTGGCTTTCTTTCTAAATCTCTGGGGATCTGGACGGTaGTACAACCCGGTCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: AKPRKSESMGELAFFLNLWGSGR*YNPVTV Trigger: CACAGTGACCGGGTTGTATCACCGTCCAGATCCCCA...GAGATTTAGAAAGAAAGCCAGTTCTCCCATAGACTCTGACTTTCTTGGCTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044725.9 |
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| CDS-3UTR GCA 90 bp | AGTCAGGAAAAAGCCAAGGTGAGAAAGGGACCACTGACCTCCTCAACCAAAATGCTCTGGAGACCCTTCTaGTGCTGCCATGAAGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: SQEKAKVRKGPLTSSTKMLWRPF*CCHEEK Trigger: TTTCTCTTCATGGCAGCAGCAGAAGGGTCTCCAGAG...CATTTTGGTTGAGGAGGTCAGTGGTCCCTTTCTCACCTTGGCTTTTTCCTGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000195615.2 |
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| CDS-3UTR CCA 90 bp | AAGTCAGGAAAAAGCCAAGGTGAGAAAGGGACCACTGACCTCCTCAACCAAAATGTTGTCCAAGGGGTCTaGACAGCAGCAACAAATAGC | + |
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Preference number: 4 (lower is better) Translates to: KSGKSQGEKGTTDLLNQNVVQGV*TAATNS Trigger: GCTATTTGTTGCTGCTGTCCAGACCCCTTGGACAAC...ATTTTGGTTGAGGAGGTCAGTGGTCCCTTTCTCACCTTGGCTTTTTCCTGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000195615.2 |
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| CDS CCA 90 bp | CCCGCAGAAAGTCGCTGCCCAGGGTGCCCAGCGCTCCGAGCACCGTaGCGGGCAAAGCTTGCAGAAACTGCCCGGCCCAAGGCTCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: PAESRCPGCPALRAP*RAKLAETARPKAPP Trigger: TGGCGGAGCCTTGGGCCGGGCAGTTTCTGCAAGCTTTGCCCGCCACGGTGCTCGGAGCGCTGGGCACCCTGGGCAGCGACTTTCTGCGGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 ENSMUST00000195615.2 |
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| CDS GCA 90 bp | GAGTCACTCGCATGTCTTGTGTCTCCCACTCCCGCAGAAAGTCGCTaGCCAGGGTGCCCAGCGCTCCGAGCACCGTGGCGGGCAAAGCTT | + |
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Preference number: 5 (lower is better) Translates to: ESLACLVSPTPAESR*PGCPALRAPWRAKL Trigger: AAGCTTTGCCCGCCACGGTGCTCGGAGCGCTGGGCACCCTGGGCAGCGACTTTCTGCGGGAGTGGGAGACACAAGACATGCGAGTGACTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 ENSMUST00000195615.2 |
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| CDS GCA 90 bp | GCATGTCTTGTGTCTCCCACTCCCGCAGAAAGTCGCTGCCCAGGGTaGCCAGCGCTCCGAGCACCGTGGCGGGCAAAGCTTGCAGAAACT | + |
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Preference number: 5 (lower is better) Translates to: ACLVSPTPAESRCPG*PALRAPWRAKLAET Trigger: AGTTTCTGCAAGCTTTGCCCGCCACGGTGCTCGGAGCGCTGGGCACCCTGGGCAGCGACTTTCTGCGGGAGTGGGAGACACAAGACATGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 ENSMUST00000195615.2 |
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| CDS-3UTR CAA 90 bp | TGCCCAGTACCTGAAGCTGTTGGAGGCAAGGCTGAGGGCAGTGGAGGCTCACCCAGTCACTCGCATGTCTaGTGTCTCCCACTCCCGCAG | + |
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Preference number: 5 (lower is better) Translates to: CPVPEAVGGKAEGSGGSPSHSHV*CLPLPQ Trigger: CTGCGGGAGTGGGAGACACAAGACATGCGAGTGACT...GGGTGAGCCTCCACTGCCCTCAGCCTTGCCTCCAACAGCTTCAGGTACTGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 ENSMUST00000195615.2 |
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| CDS-3UTR CAA 90 bp | AGTGGAGGCTCACCCTGGAAGCATCATGGTACTCCAGTCCCCCAACCCCAAGCCAGTCACTCGCATGTCTaGTGTCTCCCACTCCCGCAG | + |
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Preference number: 5 (lower is better) Translates to: SGGSPWKHHGTPVPQPQASHSHV*CLPLPQ Trigger: CTGCGGGAGTGGGAGACACAAGACATGCGAGTGACT...GGCTTGGGGTTGGGGGACTGGAGTACCATGATGCTTCCAGGGTGAGCCTCCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 |
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| CDS-3UTR CAA 90 bp | TTCACCTGCCCAGTACCTGAAGCTGTTGGAGGCAAGGCTGAGGGCAGTGGAGGCCACAGCAGGAGCAGCTaGAAGAGAGTCACTCGCATG | + |
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Preference number: 5 (lower is better) Translates to: FTCPVPEAVGGKAEGSGGHSRSS*KRVTRM Trigger: CATGCGAGTGACTCTCTTCAAGCTGCTCCTGCTGTG...GCCTCCACTGCCCTCAGCCTTGCCTCCAACAGCTTCAGGTACTGGGCAGGTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 ENSMUST00000195615.2 |
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| CDS CCA 90 bp | CCTTCTGCTGCTGCCATGAAGAGAAATGTGTGGAGCCATCAGGTGTaGATCCATTCTGGCCACCCAGACCTGGACGGTGATACAACCCGG | + |
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Preference number: 5 (lower is better) Translates to: PSAAAMKRNVWSHQV*IHSGHPDLDGDTTR Trigger: CCGGGTTGTATCACCGTCCAGGTCTGGGTGGCCAGAATGGATCCACACCTGATGGCTCCACACATTTCTCTTCATGGCAGCAGCAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195615.2 |
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| CDS TCA 90 bp | GCTGGATGCCCAGGAGACTTAACACCAACCACAGCAGGAGCAGCTTaGAGAGAGTCACTCGCATGTCTTGTGTCTCCCACTCCCGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: AGCPGDLTPTTAGAA*RESLACLVSPTPAE Trigger: TTCTGCGGGAGTGGGAGACACAAGACATGCGAGTGACTCTCTTCAAGCTGCTCCTGCTGTGGTTGGTGTTAAGTCTCCTGGGCATCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 ENSMUST00000195615.2 |
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| CDS GCA 90 bp | AGGAGCCAGCGGACCCAGCGATATCTCTGGAGACCCTTCTGCTGCTaGCATGAAGAGAAATGTGTGGAGCCATCAGGTGTGGATCCATTC | + |
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Preference number: 5 (lower is better) Translates to: RSQRTQRYLWRPFCC*HEEKCVEPSGVDPF Trigger: GAATGGATCCACACCTGATGGCTCCACACATTTCTCTTCATGGCAGCAGCAGAAGGGTCTCCAGAGATATCGCTGGGTCCGCTGGCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195615.2 |
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| CDS-3UTR CAA 90 bp | AGTCAGGAAAAAGCCAAGGTGAGAAAGGGACCACTGACCTCCTCAACCAAAATGCGTGGCGGGCAAAGCTaGCAGAAACTGCCCGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: SQEKAKVRKGPLTSSTKMRGGQS*QKLPGP Trigger: TGGGCCGGGCAGTTTCTGCAAGCTTTGCCCGCCACG...CATTTTGGTTGAGGAGGTCAGTGGTCCCTTTCTCACCTTGGCTTTTTCCTGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 ENSMUST00000195615.2 |
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| CDS-3UTR CAA 90 bp | CTGAGGAAGTGGTGTTTTCATGGGGACACTGGCTACCCACCACCTTGGAACCTCCACAGCAGGAGCAGCTaGAAGAGAGTCACTCGCATG | + |
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Preference number: 5 (lower is better) Translates to: LRKWCFHGDTGYPPPWNLHSRSS*KRVTRM Trigger: CATGCGAGTGACTCTCTTCAAGCTGCTCCTGCTGTG...GAGGTTCCAAGGTGGTGGGTAGCCAGTGTCCCCATGAAAACACCACTTCCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044725.9 |
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| CDS-3UTR CAA 90 bp | ACCCTTGACAAGAAGTCTTTCCTTTTGTTAAGAGACAAACTTCACCTGCCCAGTCGTGGCGGGCAAAGCTaGCAGAAACTGCCCGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: TLDKKSFLLLRDKLHLPSRGGQS*QKLPGP Trigger: TGGGCCGGGCAGTTTCTGCAAGCTTTGCCCGCCACG...ACTGGGCAGGTGAAGTTTGTCTCTTAACAAAAGGAAAGACTTCTTGTCAAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 ENSMUST00000195615.2 |
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| CDS-3UTR CAA 90 bp | AGCAAAGCCAAGAAAGTCAGAGTCTATGGGAGAACTGGCTTTCTTTCTAAATCTCGTGGCGGGCAAAGCTaGCAGAAACTGCCCGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: SKAKKVRVYGRTGFLSKSRGGQS*QKLPGP Trigger: TGGGCCGGGCAGTTTCTGCAAGCTTTGCCCGCCACG...AGATTTAGAAAGAAAGCCAGTTCTCCCATAGACTCTGACTTTCTTGGCTTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 |
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| CDS-3UTR CAA 90 bp | ACCCTTGACAAGAAGTCTTTCCTTTTGTTAAGAGACAAACTTCACCTGCCCAGTCACAGCAGGAGCAGCTaGAAGAGAGTCACTCGCATG | + |
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Preference number: 5 (lower is better) Translates to: TLDKKSFLLLRDKLHLPSHSRSS*KRVTRM Trigger: CATGCGAGTGACTCTCTTCAAGCTGCTCCTGCTGTG...ACTGGGCAGGTGAAGTTTGTCTCTTAACAAAAGGAAAGACTTCTTGTCAAGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 ENSMUST00000195615.2 |
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| CDS GCA 72 bp | GTGTCTCCCACTCCCGCAGAAAGTCGCTGCCCAGGGTaGCCAGCGCTCCGAGCACCGTGGCGGGCAAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: VSPTPAESRCPG*PALRAPWRAKL Trigger: AAGCTTTGCCCGCCACGGTGCTCGGAGCGCTGGGCACCCTGGGCAGCGACTTTCTGCGGGAGTGGGAGACAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 ENSMUST00000195615.2 |
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| CDS GCA 72 bp | GCATGTCTTGTGTCTCCCACTCCCGCAGAAAGTCGCTaGCCAGGGTGCCCAGCGCTCCGAGCACCGTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: ACLVSPTPAESR*PGCPALRAPWR Trigger: CCGCCACGGTGCTCGGAGCGCTGGGCACCCTGGGCAGCGACTTTCTGCGGGAGTGGGAGACACAAGACATGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 ENSMUST00000195615.2 |
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| CDS CAA 90 bp | CACCAACCACAGCAGGAGCAGCTTGAAGAGAGTCACTCGCATGTCTaGTGTCTCCCACTCCCGCAGAAAGTCGCTGCCCAGGGTGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: HQPQQEQLEESHSHV*CLPLPQKVAAQGAQ Trigger: CTGGGCACCCTGGGCAGCGACTTTCTGCGGGAGTGGGAGACACAAGACATGCGAGTGACTCTCTTCAAGCTGCTCCTGCTGTGGTTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 ENSMUST00000195615.2 |
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| CDS CAA 72 bp | CAGCAGGAGCAGCTTGAAGAGAGTCACTCGCATGTCTaGTGTCTCCCACTCCCGCAGAAAGTCGCTGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: QQEQLEESHSHV*CLPLPQKVAAQ Trigger: CTGGGCAGCGACTTTCTGCGGGAGTGGGAGACACAAGACATGCGAGTGACTCTCTTCAAGCTGCTCCTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 ENSMUST00000195615.2 |
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| CDS CAA 90 bp | AGCTGGATGCCCAGGAGACTTAACACCAACCACAGCAGGAGCAGCTaGAAGAGAGTCACTCGCATGTCTTGTGTCTCCCACTCCCGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SWMPRRLNTNHSRSS*KRVTRMSCVSHSRR Trigger: TCTGCGGGAGTGGGAGACACAAGACATGCGAGTGACTCTCTTCAAGCTGCTCCTGCTGTGGTTGGTGTTAAGTCTCCTGGGCATCCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 ENSMUST00000195615.2 |
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| CDS GCA 72 bp | CGGACCCAGCGATATCTCTGGAGACCCTTCTGCTGCTaGCATGAAGAGAAATGTGTGGAGCCATCAGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: RTQRYLWRPFCC*HEEKCVEPSGV Trigger: CACACCTGATGGCTCCACACATTTCTCTTCATGGCAGCAGCAGAAGGGTCTCCAGAGATATCGCTGGGTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195615.2 |
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| CDS GCA 72 bp | AGCCAGCGGACCCAGCGATATCTCTGGAGACCCTTCTaGTGCTGCCATGAAGAGAAATGTGTGGAGCCATCA | + |
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Preference number: 6 (lower is better) Translates to: SQRTQRYLWRPF*CCHEEKCVEPS Trigger: TGATGGCTCCACACATTTCTCTTCATGGCAGCAGCAGAAGGGTCTCCAGAGATATCGCTGGGTCCGCTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195615.2 |
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| CDS CCA 72 bp | GAGAAATGTGTGGAGCCATCAGGTGTGGATCCATTCTaGCCACCCAGACCTGGAGGCAGGAACACACCCATA | + |
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Preference number: 6 (lower is better) Translates to: EKCVEPSGVDPF*PPRPGGRNTPI Trigger: TATGGGTGTGTTCCTGCCTCCAGGTCTGGGTGGCCAGAATGGATCCACACCTGATGGCTCCACACATTTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044725.9 |
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| CDS CAA 72 bp | CCCAGGAGACTTAACACCAACCACAGCAGGAGCAGCTaGAAGAGAGTCACTCGCATGTCTTGTGTCTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: PRRLNTNHSRSS*KRVTRMSCVSH Trigger: GTGGGAGACACAAGACATGCGAGTGACTCTCTTCAAGCTGCTCCTGCTGTGGTTGGTGTTAAGTCTCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 ENSMUST00000195615.2 |
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| CDS TCA 72 bp | CCAGGAGACTTAACACCAACCACAGCAGGAGCAGCTTaGAGAGAGTCACTCGCATGTCTTGTGTCTCCCACT | + |
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Preference number: 6 (lower is better) Translates to: PGDLTPTTAGAA*RESLACLVSPT Trigger: AGTGGGAGACACAAGACATGCGAGTGACTCTCTTCAAGCTGCTCCTGCTGTGGTTGGTGTTAAGTCTCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 ENSMUST00000195615.2 |
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| CDS CCA 72 bp | CTTCATTTGCTGCTATCTCCCATGAAGAGAAATGTGTaGAGCCATCAGGTGTGGATCCATTCTGGCCACCCA | + |
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Preference number: 6 (lower is better) Translates to: LHLLLSPMKRNV*SHQVWIHSGHP Trigger: TGGGTGGCCAGAATGGATCCACACCTGATGGCTCCACACATTTCTCTTCATGGGAGATAGCAGCAAATGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044725.9 ENSMUST00000192886.6 |
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