Pregenerated sensors for TCSTV3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095821Ensembl transcript IDs: ENSMUST00000178349.2, ENSMUST00000223967.2
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TGCCTTTGTGTGCCTTTGCTGTACCAGCAGGAGCTGACAGAAGATCCCCTAATTTCCTGGGGACACTTGTaGCTCCCTCTGACTCTCACT | + |
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Preference number: 4 (lower is better) Translates to: CLCVPLLYQQELTEDPLISWGHL*LPLTLT Trigger: AGTGAGAGTCAGAGGGAGCCACAAGTGTCCCCAGGA...AATTAGGGGATCTTCTGTCAGCTCCTGCTGGTACAGCAAAGGCACACAAAGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223967.2 |
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| CDS-3UTR CCA 90 bp | CCTTTGTGTGCCTTTGCTGTACCAGCAGGAGCTGACAGAAGATCCCCTAATTGCGTTTTCCACATCTCCTaGGGACACTTGTGGCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: PLCAFAVPAGADRRSPNCVFHIS*GHLWLP Trigger: AGGGAGCCACAAGTGTCCCCAGGAGATGTGGAAAAC...GCAATTAGGGGATCTTCTGTCAGCTCCTGCTGGTACAGCAAAGGCACACAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223967.2 |
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| CDS-3UTR GCA 90 bp | TTGTGTGCCTTTGCTGTACCAGCAGGAGCTGACAGAAGATCCCCTAATTGCAAGCCTGGCACTATAAGATaGAGGATCCTGGTCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LCAFAVPAGADRRSPNCKPGTIR*RILVRA Trigger: TGCCCTGACCAGGATCCTGCATCTTATAGTGCCAGG...CTTGCAATTAGGGGATCTTCTGTCAGCTCCTGCTGGTACAGCAAAGGCACACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223967.2 |
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| CDS-3UTR CCA 90 bp | CCTTTGTGTGCCTTTGCTGTACCAGCAGGAGCTGACAGAAGATCCCCTAATTGCCTGTGCCCTTCTTCATaGCAGAATTCAATCTGCGGT | + |
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Preference number: 4 (lower is better) Translates to: PLCAFAVPAGADRRSPNCLCPSS*QNSICG Trigger: ACCGCAGATTGAATTCTGCCATGAAGAAGGGCACAG...GCAATTAGGGGATCTTCTGTCAGCTCCTGCTGGTACAGCAAAGGCACACAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223967.2 |
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| CDS-3UTR CCA 90 bp | TTGCTGTACCAGCAGGAGCTGACAGAAGATCCCCTAATTGCAAGTCTTAGCAGGAGCAGCCTAGGTGCCTaGCACTATAAGATGCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: LLYQQELTEDPLIASLSRSSLGA*HYKMQD Trigger: ATCCTGCATCTTATAGTGCCAGGCACCTAGGCTGCT...CCTGCTAAGACTTGCAATTAGGGGATCTTCTGTCAGCTCCTGCTGGTACAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223967.2 |
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| CDS-3UTR CCA 90 bp | TTGTGTGCCTTTGCTGTACCAGCAGGAGCTGACAGAAGATCCCCTAATTGCAAGCCATCCTCAGAGCAGTaGCTTTGCTCTTTGCTGAAA | + |
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Preference number: 4 (lower is better) Translates to: LCAFAVPAGADRRSPNCKPSSEQ*LCSLLK Trigger: TTTCAGCAAAGAGCAAAGCCACTGCTCTGAGGATGG...CTTGCAATTAGGGGATCTTCTGTCAGCTCCTGCTGGTACAGCAAAGGCACACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223967.2 |
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| CDS-3UTR TCA 90 bp | TTGCTGTACCAGCAGGAGCTGACAGAAGATCCCCTAATTGCAAGTCTTAGCAGGGGCTTTGCTCTTTGCTaGAACAAAGTGTCTCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: LLYQQELTEDPLIASLSRGFALC*NKVSQN Trigger: ATTCTGAGACACTTTGTTTCAGCAAAGAGCAAAGCC...CCTGCTAAGACTTGCAATTAGGGGATCTTCTGTCAGCTCCTGCTGGTACAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223967.2 |
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| CDS-3UTR GCA 90 bp | TTGTGTGCCTTTGCTGTACCAGCAGGAGCTGACAGAAGATCCCCTAATTGCAAGTCAGAGCAGTGGCTTTaGTCTTTGCTGAAACAAAGT | + |
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Preference number: 4 (lower is better) Translates to: LCAFAVPAGADRRSPNCKSEQWL*SLLKQS Trigger: ACTTTGTTTCAGCAAAGAGCAAAGCCACTGCTCTGA...CTTGCAATTAGGGGATCTTCTGTCAGCTCCTGCTGGTACAGCAAAGGCACACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223967.2 |
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| CDS-3UTR TCA 90 bp | TTGTGTGCCTTTGCTGTACCAGCAGGAGCTGACAGAAGATCCCCTAATTGCAAGTATCTGATGTATCCTTaGCAAAACTGGGAATGGACT | + |
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Preference number: 4 (lower is better) Translates to: LCAFAVPAGADRRSPNCKYLMYP*QNWEWT Trigger: AGTCCATTCCCAGTTTTGTCAAGGATACATCAGATA...CTTGCAATTAGGGGATCTTCTGTCAGCTCCTGCTGGTACAGCAAAGGCACACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223967.2 |
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| CDS TCA 90 bp | GGCAGTCTCCACCATCACAGGTCACAAGTTCCAGCCCTTTCTCCCTaGGCAAGCTTAGTGAGGGTTGGTCTGGCTCCTCTGTATCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: GSLHHHRSQVPALSP*ASLVRVGLAPLYLC Trigger: ACAAAGATACAGAGGAGCCAGACCAACCCTCACTAAGCTTGCTCAGGGAGAAAGGGCTGGAACTTGTGACCTGTGATGGTGGAGACTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS-3UTR CAA 90 bp | TGCCTTTGTGTGCCTTTGCTGTACCAGCAGGAGCTGACAGAAGATCCCCTAATTCTGGCGAAAAGCTCTTaGAAGCCATGCCCAGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: CLCVPLLYQQELTEDPLILAKSS*KPCPAA Trigger: GGCTGCTGGGCATGGCTTCAAAGAGCTTTTCGCCAG...AATTAGGGGATCTTCTGTCAGCTCCTGCTGGTACAGCAAAGGCACACAAAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223967.2 |
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| CDS CCA 90 bp | GCTCCCTCTGACTCTCACTCTGGAAGACCTCTGTGCCCTTCTTCATaGCAGAATTCAATCTGCGGTAGGATTTCAGGTAGTCCACACTCT | + |
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Preference number: 5 (lower is better) Translates to: APSDSHSGRPLCPSS*QNSICGRISGSPHS Trigger: AGAGTGTGGACTACCTGAAATCCTACCGCAGATTGAATTCTGCCATGAAGAAGGGCACAGAGGTCTTCCAGAGTGAGAGTCAGAGGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS CCA 90 bp | GTCTGGCTCCTCTGTATCTTTGTCTTTGTAGTTTTCCACATCTCCTaGGGACACTTGTGGCTCCCTCTGACTCTCACTCTGGAAGACCTC | + |
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Preference number: 5 (lower is better) Translates to: VWLLCIFVFVVFHIS*GHLWLPLTLTLEDL Trigger: GAGGTCTTCCAGAGTGAGAGTCAGAGGGAGCCACAAGTGTCCCCAGGAGATGTGGAAAACTACAAAGACAAAGATACAGAGGAGCCAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS CCA 90 bp | TGTATCTTTGTCTTTGTAGTTTTCCACATCTCCTGGGGACACTTGTaGCTCCCTCTGACTCTCACTCTGGAAGACCTCTGTGCCCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: CIFVFVVFHISWGHL*LPLTLTLEDLCALL Trigger: AAGAAGGGCACAGAGGTCTTCCAGAGTGAGAGTCAGAGGGAGCCACAAGTGTCCCCAGGAGATGTGGAAAACTACAAAGACAAAGATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS-3UTR CAA 90 bp | TTGCTGTACCAGCAGGAGCTGACAGAAGATCCCCTAATTGCAAGTCTTAGCAGGCTCAGAGCAGTGGCTTaGCTCTTTGCTGAAACAAAG | + |
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Preference number: 5 (lower is better) Translates to: LLYQQELTEDPLIASLSRLRAVA*LFAETK Trigger: CTTTGTTTCAGCAAAGAGCAAAGCCACTGCTCTGAG...CCTGCTAAGACTTGCAATTAGGGGATCTTCTGTCAGCTCCTGCTGGTACAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223967.2 |
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| CDS TCA 90 bp | AATTGGCAATCCAGCCATCCTCAGAGCAGTGGCTTTGCTCTTTGCTaGAACAAAGTGTCTCAGAATTGGAACACCTTGTACTCTGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: NWQSSHPQSSGFALC*NKVSQNWNTLYSGL Trigger: CAGCCCAGAGTACAAGGTGTTCCAATTCTGAGACACTTTGTTTCAGCAAAGAGCAAAGCCACTGCTCTGAGGATGGCTGGATTGCCAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS-3UTR CAA 90 bp | TTGTGTGCCTTTGCTGTACCAGCAGGAGCTGACAGAAGATCCCCTAATTGCAAGCAAAGTGTCTCAGAATaGGAACACCTTGTACTCTGG | + |
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Preference number: 5 (lower is better) Translates to: LCAFAVPAGADRRSPNCKQSVSE*EHLVLW Trigger: CCAGAGTACAAGGTGTTCCAATTCTGAGACACTTTG...CTTGCAATTAGGGGATCTTCTGTCAGCTCCTGCTGGTACAGCAAAGGCACACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223967.2 |
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| CDS-3UTR CAA 90 bp | GTGCCTTTGCTGTACCAGCAGGAGCTGACAGAAGATCCCCTAATTGCAAGTCTTCAGTGGCTTTGCTCTTaGCTGAAACAAAGTGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: VPLLYQQELTEDPLIASLQWLCS*LKQSVS Trigger: TGAGACACTTTGTTTCAGCAAAGAGCAAAGCCACTG...AAGACTTGCAATTAGGGGATCTTCTGTCAGCTCCTGCTGGTACAGCAAAGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223967.2 |
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| CDS GCA 90 bp | CACTCTGGAAGACCTCTGTGCCCTTCTTCATGGCAGAATTCAATCTaGGGTAGGATTTCAGGTAGTCCACACTCTCAAATACACAAAAGG | + |
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Preference number: 5 (lower is better) Translates to: HSGRPLCPSSWQNSI*GRISGSPHSQIHKR Trigger: CCTTTTGTGTATTTGAGAGTGTGGACTACCTGAAATCCTACCGCAGATTGAATTCTGCCATGAAGAAGGGCACAGAGGTCTTCCAGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS CCA 90 bp | AAGGAGTATAGATCCCAATTGGCAATCCAGCCATCCTCAGAGCAGTaGCTTTGCTCTTTGCTGAAACAAAGTGTCTCAGAATTGGAACAC | + |
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Preference number: 5 (lower is better) Translates to: KEYRSQLAIQPSSEQ*LCSLLKQSVSELEH Trigger: GTGTTCCAATTCTGAGACACTTTGTTTCAGCAAAGAGCAAAGCCACTGCTCTGAGGATGGCTGGATTGCCAATTGGGATCTATACTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS CCA 72 bp | AAGCTCTTTGAAGCCATGCCCAGCAGCCTAGGTGCCTaGCACTATAAGATGCAGGATCCTGGTCAGGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: KLFEAMPSSLGA*HYKMQDPGQGS Trigger: ACTGCCCTGACCAGGATCCTGCATCTTATAGTGCCAGGCACCTAGGCTGCTGGGCATGGCTTCAAAGAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS TCA 72 bp | TTTTCCACATCTCCTGGGGACACTTGTGGCTCCCTCTaGCTCTCACTCTGGAAGACCTCTGTGCCCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: FSTSPGDTCGSL*LSLWKTSVPFF Trigger: GAAGAAGGGCACAGAGGTCTTCCAGAGTGAGAGTCAGAGGGAGCCACAAGTGTCCCCAGGAGATGTGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS GCA 72 bp | GTGGCTCCCTCTGACTCTCACTCTGGAAGACCTCTGTaGCCTTCTTCATGGCAGAATTCAATCTGCGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: VAPSDSHSGRPL*PSSWQNSICGR Trigger: CCTACCGCAGATTGAATTCTGCCATGAAGAAGGGCACAGAGGTCTTCCAGAGTGAGAGTCAGAGGGAGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS CAA 90 bp | TCAGAGCAGTGGCTTTGCTCTTTGCTGAAACAAAGTGTCTCAGAATaGGAACACCTTGTACTCTGGGCTGGCAAGACCTGTGCACTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SEQWLCSLLKQSVSE*EHLVLWAGKTCALG Trigger: GCCCAGTGCACAGGTCTTGCCAGCCCAGAGTACAAGGTGTTCCAATTCTGAGACACTTTGTTTCAGCAAAGAGCAAAGCCACTGCTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS CAA 90 bp | CTCTGTATCTTTGTCTTTGTAGTTTTCCACATCTCCTGGGGACACTaGTGGCTCCCTCTGACTCTCACTCTGGAAGACCTCTGTGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: LCIFVFVVFHISWGH*WLPLTLTLEDLCAL Trigger: AAGGGCACAGAGGTCTTCCAGAGTGAGAGTCAGAGGGAGCCACAAGTGTCCCCAGGAGATGTGGAAAACTACAAAGACAAAGATACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS CCA 72 bp | AACACCTTGTACTCTGGGCTGGCAAGACCTGTGCACTaGGCAGTGCATGTTCTTCAATATCTGATGTATCCT | + |
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Preference number: 6 (lower is better) Translates to: NTLYSGLARPVH*AVHVLQYLMYP Trigger: AGGATACATCAGATATTGAAGAACATGCACTGCCCAGTGCACAGGTCTTGCCAGCCCAGAGTACAAGGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS CCA 72 bp | GACTCTCACTCTGGAAGACCTCTGTGCCCTTCTTCATaGCAGAATTCAATCTGCGGTAGGATTTCAGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: DSHSGRPLCPSS*QNSICGRISGS Trigger: ACTACCTGAAATCCTACCGCAGATTGAATTCTGCCATGAAGAAGGGCACAGAGGTCTTCCAGAGTGAGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS CCA 72 bp | CTCTGTATCTTTGTCTTTGTAGTTTTCCACATCTCCTaGGGACACTTGTGGCTCCCTCTGACTCTCACTCTG | + |
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Preference number: 6 (lower is better) Translates to: LCIFVFVVFHIS*GHLWLPLTLTL Trigger: CAGAGTGAGAGTCAGAGGGAGCCACAAGTGTCCCCAGGAGATGTGGAAAACTACAAAGACAAAGATACAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS CAA 90 bp | TCCCAATTGGCAATCCAGCCATCCTCAGAGCAGTGGCTTTGCTCTTaGCTGAAACAAAGTGTCTCAGAATTGGAACACCTTGTACTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SQLAIQPSSEQWLCS*LKQSVSELEHLVLW Trigger: CCAGAGTACAAGGTGTTCCAATTCTGAGACACTTTGTTTCAGCAAAGAGCAAAGCCACTGCTCTGAGGATGGCTGGATTGCCAATTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS CCA 72 bp | AGATCCCAATTGGCAATCCAGCCATCCTCAGAGCAGTaGCTTTGCTCTTTGCTGAAACAAAGTGTCTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: RSQLAIQPSSEQ*LCSLLKQSVSE Trigger: TTCTGAGACACTTTGTTTCAGCAAAGAGCAAAGCCACTGCTCTGAGGATGGCTGGATTGCCAATTGGGATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS CAA 72 bp | TGGCTTTGCTCTTTGCTGAAACAAAGTGTCTCAGAATaGGAACACCTTGTACTCTGGGCTGGCAAGACCTGT | + |
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Preference number: 6 (lower is better) Translates to: WLCSLLKQSVSE*EHLVLWAGKTC Trigger: ACAGGTCTTGCCAGCCCAGAGTACAAGGTGTTCCAATTCTGAGACACTTTGTTTCAGCAAAGAGCAAAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS CAA 72 bp | GCAATCCAGCCATCCTCAGAGCAGTGGCTTTGCTCTTaGCTGAAACAAAGTGTCTCAGAATTGGAACACCTT | + |
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Preference number: 6 (lower is better) Translates to: AIQPSSEQWLCS*LKQSVSELEHL Trigger: AAGGTGTTCCAATTCTGAGACACTTTGTTTCAGCAAAGAGCAAAGCCACTGCTCTGAGGATGGCTGGATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS CAA 72 bp | CCAATTGGCAATCCAGCCATCCTCAGAGCAGTGGCTTaGCTCTTTGCTGAAACAAAGTGTCTCAGAATTGGA | + |
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Preference number: 6 (lower is better) Translates to: PIGNPAILRAVA*LFAETKCLRIG Trigger: TCCAATTCTGAGACACTTTGTTTCAGCAAAGAGCAAAGCCACTGCTCTGAGGATGGCTGGATTGCCAATTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS GCA 72 bp | AGACCTCTGTGCCCTTCTTCATGGCAGAATTCAATCTaGGGTAGGATTTCAGGTAGTCCACACTCTCAAATA | + |
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Preference number: 6 (lower is better) Translates to: RPLCPSSWQNSI*GRISGSPHSQI Trigger: TATTTGAGAGTGTGGACTACCTGAAATCCTACCGCAGATTGAATTCTGCCATGAAGAAGGGCACAGAGGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS CCA 72 bp | CACTCTCAAATACACAAAAGGAGTATAGATCCCAATTaGCAATCCAGCCATCCTCAGAGCAGTGGCTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: HSQIHKRSIDPN*QSSHPQSSGFA Trigger: AGCAAAGCCACTGCTCTGAGGATGGCTGGATTGCCAATTGGGATCTATACTCCTTTTGTGTATTTGAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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| CDS TCA 72 bp | TGGGCAGTGCATGTTCTTCAATATCTGATGTATCCTTaGCAAAACTGGGAATGGACTGCATCATCTTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: WAVHVLQYLMYP*QNWEWTASSSW Trigger: CCAAGAAGATGATGCAGTCCATTCCCAGTTTTGTCAAGGATACATCAGATATTGAAGAACATGCACTGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178349.2 ENSMUST00000223967.2 |
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