Pregenerated sensors for TCP11L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020034Ensembl transcript IDs: ENSMUST00000020223.8
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGTCTAGGGACAGGGCGGAGAATGGGCCACATCTCCAATGCCACTaGTGGAAACGGACCATGTACCAAGTGCTGATCTCCATCTCGTCT | + |
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Preference number: 1 (lower is better) Translates to: QSRDRAENGPHLQCH*WKRTMYQVLISISS Trigger: AGACGAGATGGAGATCAGCACTTGGTACATGGTCCGTTTCCACCAGTGGCATTGGAGATGTGGCCCATTCTCCGCCCTGTCCCTAGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| 3UTR-3UTR CCA 90 bp | TCACATAGAAATGTGCAATATACTCCAGGACAGCCAGGGCTGTTACACAGACACGGACAGGGCGGAGAATaGGCCACATCTCCAATGCCA | + |
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Preference number: 2 (lower is better) Translates to: SHRNVQYTPGQPGLLHRHGQGGE*ATSPMP Trigger: TGGCATTGGAGATGTGGCCCATTCTCCGCCCTGTCC...GTGTCTGTGTAACAGCCCTGGCTGTCCTGGAGTATATTGCACATTTCTATGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| 3UTR-3UTR CCA 90 bp | TCACATAGAAATGTGCAATATACTCCAGGACAGCCAGGGCTGTTACACAGACACCATCTCCAATGCCACTaGTGGAAACGGACCATGTAC | + |
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Preference number: 2 (lower is better) Translates to: SHRNVQYTPGQPGLLHRHHLQCH*WKRTMY Trigger: GTACATGGTCCGTTTCCACCAGTGGCATTGGAGATG...GTGTCTGTGTAACAGCCCTGGCTGTCCTGGAGTATATTGCACATTTCTATGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| 3UTR-3UTR CCA 90 bp | TTCATTAAAACTATCTGCTTTAAACACAAGAGGGGTGTGAGGCCCTCTGTGGTGCTCCAATGCCACTGGTaGAAACGGACCATGTACCAA | + |
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Preference number: 2 (lower is better) Translates to: FIKTICFKHKRGVRPSVVLQCHW*KRTMYQ Trigger: TTGGTACATGGTCCGTTTCCACCAGTGGCATTGGAG...CACCACAGAGGGCCTCACACCCCTCTTGTGTTTAAAGCAGATAGTTTTAATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| 3UTR CCA 72 bp | GACAGGGCGGAGAATGGGCCACATCTCCAATGCCACTaGTGGAAACGGACCATGTACCAAGTGCTGATCTCC | + |
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Preference number: 3 (lower is better) Translates to: DRAENGPHLQCH*WKRTMYQVLIS Trigger: GGAGATCAGCACTTGGTACATGGTCCGTTTCCACCAGTGGCATTGGAGATGTGGCCCATTCTCCGCCCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| 3UTR CCA 72 bp | AGGGCGGAGAATGGGCCACATCTCCAATGCCACTGGTaGAAACGGACCATGTACCAAGTGCTGATCTCCATC | + |
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Preference number: 3 (lower is better) Translates to: RAENGPHLQCHW*KRTMYQVLISI Trigger: GATGGAGATCAGCACTTGGTACATGGTCCGTTTCCACCAGTGGCATTGGAGATGTGGCCCATTCTCCGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR TCA 90 bp | ATATACTCCAGGACAGCCAGGGCTGTTACACAGACACACTGTCCAAAACAACAACCGGGGAGGGCTTGTTaGGGCAGGAGAGCTGGATTT | + |
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Preference number: 4 (lower is better) Translates to: IYSRTARAVTQTHCPKQQPGRAC*GRRAGF Trigger: AAATCCAGCTCTCCTGCCTCAACAAGCCCTCCCCGG...TTGTTGTTTTGGACAGTGTGTCTGTGTAACAGCCCTGGCTGTCCTGGAGTATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR TCA 90 bp | ATATACTCCAGGACAGCCAGGGCTGTTACACAGACACACTGTCCAAAACAACAATGGAGGAATCGCTGGTaGAGCTCTGCCTGGAACACT | + |
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Preference number: 4 (lower is better) Translates to: IYSRTARAVTQTHCPKQQWRNRW*SSAWNT Trigger: AGTGTTCCAGGCAGAGCTTCACCAGCGATTCCTCCA...TTGTTGTTTTGGACAGTGTGTCTGTGTAACAGCCCTGGCTGTCCTGGAGTATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR GCA 90 bp | TCACATAGAAATGTGCAATATACTCCAGGACAGCCAGGGCTGTTACACAGACACGCACTGTGCTCGGCCTaGTGTCTAATGAGGTCGATG | + |
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Preference number: 4 (lower is better) Translates to: SHRNVQYTPGQPGLLHRHALCSA*CLMRSM Trigger: CATCGACCTCATTAGACAGCAGGCCGAGCACAGTGC...GTGTCTGTGTAACAGCCCTGGCTGTCCTGGAGTATATTGCACATTTCTATGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR CCA 90 bp | TATACTCCAGGACAGCCAGGGCTGTTACACAGACACACTGTCCAAAACAACAACACATCCCAGAAGGCCTaGTGGACAACACGCTTCACT | + |
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Preference number: 4 (lower is better) Translates to: YTPGQPGLLHRHTVQNNNTSQKA*WTTRFT Trigger: AGTGAAGCGTGTTGTCCACCAGGCCTTCTGGGATGT...GTTGTTGTTTTGGACAGTGTGTCTGTGTAACAGCCCTGGCTGTCCTGGAGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR TCA 90 bp | ATATACTCCAGGACAGCCAGGGCTGTTACACAGACACACTGTCCAAAACAACAATGTTCCCGCCAGGCGTaGGGAAAGAGAGAAGAATCT | + |
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Preference number: 4 (lower is better) Translates to: IYSRTARAVTQTHCPKQQCSRQA*GKREES Trigger: AGATTCTTCTCTCTTTCCTCACGCCTGGCGGGAACA...TTGTTGTTTTGGACAGTGTGTCTGTGTAACAGCCCTGGCTGTCCTGGAGTATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR TCA 90 bp | TTCATTAAAACTATCTGCTTTAAACACAAGAGGGGTGTGAGGCCCTCTGTGGTGGGAGGCATGCTCTTCTaGGTGCTTGGAAGACAGAGC | + |
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Preference number: 4 (lower is better) Translates to: FIKTICFKHKRGVRPSVVGGMLF*VLGRQS Trigger: GCTCTGTCTTCCAAGCACTCAGAAGAGCATGCCTCC...CACCACAGAGGGCCTCACACCCCTCTTGTGTTTAAAGCAGATAGTTTTAATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR GCA 90 bp | TCACATAGAAATGTGCAATATACTCCAGGACAGCCAGGGCTGTTACACAGACACCTGGCACAGGAGGCATaGTCTTCTGAGTGCTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: SHRNVQYTPGQPGLLHRHLAQEA*SSECLE Trigger: TTCCAAGCACTCAGAAGAGCATGCCTCCTGTGCCAG...GTGTCTGTGTAACAGCCCTGGCTGTCCTGGAGTATATTGCACATTTCTATGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR CCA 90 bp | ATATACTCCAGGACAGCCAGGGCTGTTACACAGACACACTGTCCAAAACAACAATTGAGGCAGGAGAGCTaGATTTGCTGGAGGAATCGC | + |
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Preference number: 4 (lower is better) Translates to: IYSRTARAVTQTHCPKQQLRQES*ICWRNR Trigger: GCGATTCCTCCAGCAAATCCAGCTCTCCTGCCTCAA...TTGTTGTTTTGGACAGTGTGTCTGTGTAACAGCCCTGGCTGTCCTGGAGTATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR CCA 90 bp | ATATACTCCAGGACAGCCAGGGCTGTTACACAGACACACTGTCCAAAACAACAACAGTTCTTGAAGCCGTaGTCCATCTGTCATGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: IYSRTARAVTQTHCPKQQQFLKP*SICHEC Trigger: ACACTCATGACAGATGGACCACGGCTTCAAGAACTG...TTGTTGTTTTGGACAGTGTGTCTGTGTAACAGCCCTGGCTGTCCTGGAGTATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR TCA 90 bp | ATATACTCCAGGACAGCCAGGGCTGTTACACAGACACACTGTCCAAAACAACAATTGATTGAGCTTTTCTaGCAGTTCTTGAAGCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: IYSRTARAVTQTHCPKQQLIELF*QFLKPW Trigger: CCACGGCTTCAAGAACTGTCAGAAAAGCTCAATCAA...TTGTTGTTTTGGACAGTGTGTCTGTGTAACAGCCCTGGCTGTCCTGGAGTATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR TCA 90 bp | ATATACTCCAGGACAGCCAGGGCTGTTACACAGACACACTGTCCAAAACAACAACCGACAAGGTTAGCTTaGACCTCAGCATTTAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: IYSRTARAVTQTHCPKQQPTRLA*TSAFKV Trigger: CACTTTAAATGCTGAGGTTCAAGCTAACCTTGTCGG...TTGTTGTTTTGGACAGTGTGTCTGTGTAACAGCCCTGGCTGTCCTGGAGTATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR GCA 90 bp | TTCATTAAAACTATCTGCTTTAAACACAAGAGGGGTGTGAGGCCCTCTGTGGTGCTCAGCACTGAGATCTaGTTCCAAGACATCCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: FIKTICFKHKRGVRPSVVLSTEI*FQDIPE Trigger: TTCTGGGATGTCTTGGAAGCAGATCTCAGTGCTGAG...CACCACAGAGGGCCTCACACCCCTCTTGTGTTTAAAGCAGATAGTTTTAATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR TCA 90 bp | TTCATTAAAACTATCTGCTTTAAACACAAGAGGGGTGTGAGGCCCTCTGTGGTGACTTCAGCACAAGTCTaGACACCAATAGAATGCAGG | + |
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Preference number: 4 (lower is better) Translates to: FIKTICFKHKRGVRPSVVTSAQV*TPIECR Trigger: CCTGCATTCTATTGGTGTTCAGACTTGTGCTGAAGT...CACCACAGAGGGCCTCACACCCCTCTTGTGTTTAAAGCAGATAGTTTTAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR TCA 90 bp | TTCATTAAAACTATCTGCTTTAAACACAAGAGGGGTGTGAGGCCCTCTGTGGTGTTAGTTAGTGGGAAGTaGAGCATCTATCTTCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: FIKTICFKHKRGVRPSVVLVSGK*SIYLPH Trigger: GTGGGGAAGATAGATGCTTCACTTCCCACTAACTAA...CACCACAGAGGGCCTCACACCCCTCTTGTGTTTAAAGCAGATAGTTTTAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR TCA 90 bp | GTATTTTTAAATGTTTGCACATTGTATTCCTGCAGGCAGCTGCAGTATAATCAAGAACCGAGAAGACTCTaGGTCACTCTGCTGGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: VFLNVCTLYSCRQLQYNQEPRRL*VTLLVL Trigger: GAGGACCAGCAGAGTGACTCAGAGTCTTCTCGGTTC...TTGATTATACTGCAGCTGCCTGCAGGAATACAATGTGCAAACATTTAAAAATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR TCA 90 bp | GTATTTTTAAATGTTTGCACATTGTATTCCTGCAGGCAGCTGCAGTATAATCAACCACCATGTTGTTGGTaGTTAAGGCCACGCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: VFLNVCTLYSCRQLQYNQPPCCW*LRPRRQ Trigger: CTGCCTGCGTGGCCTTAATCACCAACAACATGGTGG...TTGATTATACTGCAGCTGCCTGCAGGAATACAATGTGCAAACATTTAAAAATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR TCA 90 bp | TATACTCCAGGACAGCCAGGGCTGTTACACAGACACACTGTCCAAAACAACAACCATACACCTGTTTGTTaGGATTCACAATGTTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: YTPGQPGLLHRHTVQNNNHTPVC*DSQCLH Trigger: ATGCAAACATTGTGAATCTCAACAAACAGGTGTATG...GTTGTTGTTTTGGACAGTGTGTCTGTGTAACAGCCCTGGCTGTCCTGGAGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR CCA 90 bp | TTCATTAAAACTATCTGCTTTAAACACAAGAGGGGTGTGAGGCCCTCTGTGGTGGCATTTTGCTTCAGCTaGAAGTTCTCATTCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: FIKTICFKHKRGVRPSVVAFCFS*KFSFTA Trigger: AGCTGTGAATGAGAACTTCCAGCTGAAGCAAAATGC...CACCACAGAGGGCCTCACACCCCTCTTGTGTTTAAAGCAGATAGTTTTAATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR CCA 90 bp | GTATTTTTAAATGTTTGCACATTGTATTCCTGCAGGCAGCTGCAGTATAATCAAGACATCAAGGCCACCTaGCACAGGAGGCATGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: VFLNVCTLYSCRQLQYNQDIKAT*HRRHAL Trigger: AAGAGCATGCCTCCTGTGCCAGGTGGCCTTGATGTC...TTGATTATACTGCAGCTGCCTGCAGGAATACAATGTGCAAACATTTAAAAATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR TCA 90 bp | TCACATAGAAATGTGCAATATACTCCAGGACAGCCAGGGCTGTTACACAGACACGCAGTCATTTTCAATTaGTTGAGCTTTTCTGACAGT | + |
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Preference number: 4 (lower is better) Translates to: SHRNVQYTPGQPGLLHRHAVIFN*LSFSDS Trigger: ACTGTCAGAAAAGCTCAATCAATTGAAAATGACTGC...GTGTCTGTGTAACAGCCCTGGCTGTCCTGGAGTATATTGCACATTTCTATGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR TCA 90 bp | GTATTTTTAAATGTTTGCACATTGTATTCCTGCAGGCAGCTGCAGTATAATCAAAGCCACTCTGTGGTTTaGCTGAGGGCATTTGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: VFLNVCTLYSCRQLQYNQSHSVV*LRAFGV Trigger: AACTCCAAATGCCCTCAGTCAAACCACAGAGTGGCT...TTGATTATACTGCAGCTGCCTGCAGGAATACAATGTGCAAACATTTAAAAATAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR TCA 90 bp | GTATTTTTAAATGTTTGCACATTGTATTCCTGCAGGCAGCTGCAGTATAATCAAGTGGTCCATCTGTCATaGGTGTCTCTGGTAAGACTT | + |
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Preference number: 4 (lower is better) Translates to: VFLNVCTLYSCRQLQYNQVVHLS*VSLVRL Trigger: AAGTCTTACCAGAGACACTCATGACAGATGGACCAC...TTGATTATACTGCAGCTGCCTGCAGGAATACAATGTGCAAACATTTAAAAATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR GCA 90 bp | GTATTTTTAAATGTTTGCACATTGTATTCCTGCAGGCAGCTGCAGTATAATCAATCGGGGAGAGCATTTTaGTTCAGCTGGAAGTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: VFLNVCTLYSCRQLQYNQSGRAF*FSWKFS Trigger: TGAGAACTTCCAGCTGAAGCAAAATGCTCTCCCCGA...TTGATTATACTGCAGCTGCCTGCAGGAATACAATGTGCAAACATTTAAAAATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR GCA 90 bp | GTATTTTTAAATGTTTGCACATTGTATTCCTGCAGGCAGCTGCAGTATAATCAAAGGTCTCTTTATTCATaGCTTCAAGCAGAACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: VFLNVCTLYSCRQLQYNQRSLYS*LQAEQL Trigger: CAGCTGTTCTGCTTGAAGGCATGAATAAAGAGACCT...TTGATTATACTGCAGCTGCCTGCAGGAATACAATGTGCAAACATTTAAAAATAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS CCA 90 bp | GCAGCCAAGCACTTCCAGCTCCCGCTGGATGACATCAAGGCCACCTaGCACAGGAGGCATGCTCTTCTGAGTGCTTGGAAGACAGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: AAKHFQLPLDDIKAT*HRRHALLSAWKTEQ Trigger: CTGCTCTGTCTTCCAAGCACTCAGAAGAGCATGCCTCCTGTGCCAGGTGGCCTTGATGTCATCCAGCGGGAGCTGGAAGTGCTTGGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS TCA 90 bp | GCTTCCAAGACATCCCAGAAGGCCTGGTGGACAACACGCTTCACTTaGCCAGCAAGGCTGTTCTCGGGGAGAGCATTTTGCTTCAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: ASKTSQKAWWTTRFT*PARLFSGRAFCFSW Trigger: CCAGCTGAAGCAAAATGCTCTCCCCGAGAACAGCCTTGCTGGTCAAGTGAAGCGTGTTGTCCACCAGGCCTTCTGGGATGTCTTGGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS CCA 90 bp | GACATCAAGGCCACCTGGCACAGGAGGCATGCTCTTCTGAGTGCTTaGAAGACAGAGCAGGCCTTTCATGTACAACTGGATCCGTTTATC | + |
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Preference number: 5 (lower is better) Translates to: DIKATWHRRHALLSA*KTEQAFHVQLDPFI Trigger: GATAAACGGATCCAGTTGTACATGAAAGGCCTGCTCTGTCTTCCAAGCACTCAGAAGAGCATGCCTCCTGTGCCAGGTGGCCTTGATGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS TCA 90 bp | TGCTGTCTAATGAGGTCGATGTCCAGAACCTCACAGATCTGGCTGTaGAGTCTGTTCCCGCCAGGCGTGAGGAAAGAGAGAAGAATCTCT | + |
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Preference number: 5 (lower is better) Translates to: CCLMRSMSRTSQIWL*SLFPPGVRKERRIS Trigger: AGAGATTCTTCTCTCTTTCCTCACGCCTGGCGGGAACAGACTTCACAGCCAGATCTGTGAGGTTCTGGACATCGACCTCATTAGACAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS GCA 90 bp | CAGTTTGATGGCATATTCATACTGAGGAGGCTCAGCACTGAGATCTaGTTCCAAGACATCCCAGAAGGCCTGGTGGACAACACGCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: QFDGIFILRRLSTEI*FQDIPEGLVDNTLH Trigger: GTGAAGCGTGTTGTCCACCAGGCCTTCTGGGATGTCTTGGAAGCAGATCTCAGTGCTGAGCCTCCTCAGTATGAATATGCCATCAAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS GCA 90 bp | AGAGCAGGCCTTTCATGTACAACTGGATCCGTTTATCCATCAAGGTaGAGACAGGATTGTCCTTCTCTTCAAGGCTGGAGAGCTGACCGA | + |
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Preference number: 5 (lower is better) Translates to: RAGLSCTTGSVYPSR*RQDCPSLQGWRADR Trigger: TCGGTCAGCTCTCCAGCCTTGAAGAGAAGGACAATCCTGTCTGCACCTTGATGGATAAACGGATCCAGTTGTACATGAAAGGCCTGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR CAA 90 bp | TATACTCCAGGACAGCCAGGGCTGTTACACAGACACACTGTCCAAAACAACAACATAGTTGGCCAGACCTaGGATGTCGACAGCACTGTG | + |
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Preference number: 5 (lower is better) Translates to: YTPGQPGLLHRHTVQNNNIVGQT*DVDSTV Trigger: CACAGTGCTGTCGACATCCAAGGTCTGGCCAACTAT...GTTGTTGTTTTGGACAGTGTGTCTGTGTAACAGCCCTGGCTGTCCTGGAGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR CAA 90 bp | TATACTCCAGGACAGCCAGGGCTGTTACACAGACACACTGTCCAAAACAACAACACAGCACCCACCATGTaGTTGGTGATTAAGGCCACG | + |
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Preference number: 5 (lower is better) Translates to: YTPGQPGLLHRHTVQNNNTAPTM*LVIKAT Trigger: CGTGGCCTTAATCACCAACAACATGGTGGGTGCTGT...GTTGTTGTTTTGGACAGTGTGTCTGTGTAACAGCCCTGGCTGTCCTGGAGTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS TCA 90 bp | GGCGAGCCTCTCTCTTCCAGGGCCTTGTTAACTTCAGCACAAGTCTaGACACCAATAGAATGCAGGGCTTCCTTCAAGTTAAAGGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: GEPLSSRALLTSAQV*TPIECRASFKLKVS Trigger: AGAGACCTTTAACTTGAAGGAAGCCCTGCATTCTATTGGTGTTCAGACTTGTGCTGAAGTTAACAAGGCCCTGGAAGAGAGAGGCTCGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS GCA 90 bp | AAGCACCAACAGAGGGCTCAGGCTAGGCGTGGAGCTATGTTCAGCTaGAGGAGCTACATCAGTCTCAGAAAGCAATTCTTTATCTATGGA | + |
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Preference number: 5 (lower is better) Translates to: KHQQRAQARRGAMFS*RSYISLRKQFFIYG Trigger: TCCATAGATAAAGAATTGCTTTCTGAGACTGATGTAGCTCCTGCAGCTGAACATAGCTCCACGCCTAGCCTGAGCCCTCTGTTGGTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS CCA 90 bp | AATGGTCCATACACCTGTTTGTTGAGATTCACAATGTTTGCATACTaGCAGCCAAGCACTTCCAGCTCCCGCTGGATGACATCAAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: NGPYTCLLRFTMFAY*QPSTSSSRWMTSRP Trigger: TGGCCTTGATGTCATCCAGCGGGAGCTGGAAGTGCTTGGCTGCCAGTATGCAAACATTGTGAATCTCAACAAACAGGTGTATGGACCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR CAA 90 bp | TCACATAGAAATGTGCAATATACTCCAGGACAGCCAGGGCTGTTACACAGACACGACAACACGCTTCACTaGACCAGCAAGGCTGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: SHRNVQYTPGQPGLLHRHDNTLH*TSKAVL Trigger: GAGAACAGCCTTGCTGGTCAAGTGAAGCGTGTTGTC...GTGTCTGTGTAACAGCCCTGGCTGTCCTGGAGTATATTGCACATTTCTATGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR CAA 90 bp | ATATACTCCAGGACAGCCAGGGCTGTTACACAGACACACTGTCCAAAACAACAACAGCCACTCTGTGGTTaGACTGAGGGCATTTGGAGT | + |
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Preference number: 5 (lower is better) Translates to: IYSRTARAVTQTHCPKQQQPLCG*TEGIWS Trigger: ACTCCAAATGCCCTCAGTCAAACCACAGAGTGGCTG...TTGTTGTTTTGGACAGTGTGTCTGTGTAACAGCCCTGGCTGTCCTGGAGTATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS GCA 90 bp | TGCATAAAATGGTCCATACACCTGTTTGTTGAGATTCACAATGTTTaGATACTGGCAGCCAAGCACTTCCAGCTCCCGCTGGATGACATC | + |
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Preference number: 5 (lower is better) Translates to: CIKWSIHLFVEIHNV*ILAAKHFQLPLDDI Trigger: GATGTCATCCAGCGGGAGCTGGAAGTGCTTGGCTGCCAGTATGCAAACATTGTGAATCTCAACAAACAGGTGTATGGACCATTTTATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR CAA 90 bp | TTCATTAAAACTATCTGCTTTAAACACAAGAGGGGTGTGAGGCCCTCTGTGGTGAAGGTGCAGACAGGATaGTCCTTCTCTTCAAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: FIKTICFKHKRGVRPSVVKVQTG*SFSSRL Trigger: CAGCCTTGAAGAGAAGGACAATCCTGTCTGCACCTT...CACCACAGAGGGCCTCACACCCCTCTTGTGTTTAAAGCAGATAGTTTTAATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR CAA 90 bp | TATACTCCAGGACAGCCAGGGCTGTTACACAGACACACTGTCCAAAACAACAACTGTCTGATAAGTTCTTaGCTGCAGCCATCACATCAT | + |
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Preference number: 5 (lower is better) Translates to: YTPGQPGLLHRHTVQNNNCLISS*LQPSHH Trigger: ATGATGTGATGGCTGCAGCAAAGAACTTATCAGACA...GTTGTTGTTTTGGACAGTGTGTCTGTGTAACAGCCCTGGCTGTCCTGGAGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR CAA 90 bp | TTCATTAAAACTATCTGCTTTAAACACAAGAGGGGTGTGAGGCCCTCTGTGGTGCAAGACACGGAAGATTaGTCTCAGCATCTCCACGAT | + |
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Preference number: 5 (lower is better) Translates to: FIKTICFKHKRGVRPSVVQDTED*SQHLHD Trigger: ATCGTGGAGATGCTGAGACAAATCTTCCGTGTCTTG...CACCACAGAGGGCCTCACACCCCTCTTGTGTTTAAAGCAGATAGTTTTAATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR CAA 90 bp | GTATTTTTAAATGTTTGCACATTGTATTCCTGCAGGCAGCTGCAGTATAATCAAGCAGGAGAGCTGGATTaGCTGGAGGAATCGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: VFLNVCTLYSCRQLQYNQAGELD*LEESLV Trigger: CACCAGCGATTCCTCCAGCAAATCCAGCTCTCCTGC...TTGATTATACTGCAGCTGCCTGCAGGAATACAATGTGCAAACATTTAAAAATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS TCA 90 bp | AGAGCATTTTGCTTCAGCTGGAAGTTCTCATTCACAGCTATTTCATaGGCGAGAGTCATGTCTGATAAGTTCTTTGCTGCAGCCATCACA | + |
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Preference number: 5 (lower is better) Translates to: RAFCFSWKFSFTAIS*ARVMSDKFFAAAIT Trigger: TGTGATGGCTGCAGCAAAGAACTTATCAGACATGACTCTCGCTCATGAAATAGCTGTGAATGAGAACTTCCAGCTGAAGCAAAATGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS TCA 90 bp | AGAATCTCTCTGATTTCTTCAAACAGTTTGATGGCATATTCATACTaGGGAGGCTCAGCACTGAGATCTGCTTCCAAGACATCCCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: RISLISSNSLMAYSY*GGSALRSASKTSQK Trigger: CTTCTGGGATGTCTTGGAAGCAGATCTCAGTGCTGAGCCTCCTCAGTATGAATATGCCATCAAACTGTTTGAAGAAATCAGAGAGATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS TCA 90 bp | GCAATTCTTTATCTATGGACTCTTTCAGCCACTCTGTGGTTTGACTaGGGGCATTTGGAGTTTCTTCTACAACTTCCTGGAATTTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: AILYLWTLSATLWFD*GHLEFLLQLPGICF Trigger: GAAACAAATTCCAGGAAGTTGTAGAAGAAACTCCAAATGCCCTCAGTCAAACCACAGAGTGGCTGAAAGAGTCCATAGATAAAGAATTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS TCA 90 bp | GCTTTCGGAATATATTTGCATAAAATGGTCCATACACCTGTTTGTTaGGATTCACAATGTTTGCATACTGGCAGCCAAGCACTTCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: AFGIYLHKMVHTPVC*DSQCLHTGSQALPA Trigger: AGCTGGAAGTGCTTGGCTGCCAGTATGCAAACATTGTGAATCTCAACAAACAGGTGTATGGACCATTTTATGCAAATATATTCCGAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS CCA 90 bp | ATCTATGGACTCTTTCAGCCACTCTGTGGTTTGACTGAGGGCATTTaGAGTTTCTTCTACAACTTCCTGGAATTTGTTTCTCTCATATTC | + |
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Preference number: 5 (lower is better) Translates to: IYGLFQPLCGLTEGI*SFFYNFLEFVSLIF Trigger: GAATATGAGAGAAACAAATTCCAGGAAGTTGTAGAAGAAACTCCAAATGCCCTCAGTCAAACCACAGAGTGGCTGAAAGAGTCCATAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR CAA 90 bp | GTATTTTTAAATGTTTGCACATTGTATTCCTGCAGGCAGCTGCAGTATAATCAAACAACTTCCTGGAATTaGTTTCTCTCATATTCCACC | + |
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Preference number: 5 (lower is better) Translates to: VFLNVCTLYSCRQLQYNQTTSWN*FLSYST Trigger: GGTGGAATATGAGAGAAACAAATTCCAGGAAGTTGT...TTGATTATACTGCAGCTGCCTGCAGGAATACAATGTGCAAACATTTAAAAATAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS-3UTR CAA 90 bp | GTATTTTTAAATGTTTGCACATTGTATTCCTGCAGGCAGCTGCAGTATAATCAAGGTCCATACACCTGTTaGTTGAGATTCACAATGTTT | + |
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Preference number: 5 (lower is better) Translates to: VFLNVCTLYSCRQLQYNQGPYTC*LRFTMF Trigger: AAACATTGTGAATCTCAACAAACAGGTGTATGGACC...TTGATTATACTGCAGCTGCCTGCAGGAATACAATGTGCAAACATTTAAAAATAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS CCA 72 bp | TTTGCATACTGGCAGCCAAGCACTTCCAGCTCCCGCTaGATGACATCAAGGCCACCTGGCACAGGAGGCATG | + |
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Preference number: 6 (lower is better) Translates to: FAYWQPSTSSSR*MTSRPPGTGGM Trigger: CATGCCTCCTGTGCCAGGTGGCCTTGATGTCATCCAGCGGGAGCTGGAAGTGCTTGGCTGCCAGTATGCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS GCA 72 bp | GCCAGACCTTGGATGTCGACAGCACTGTGCTCGGCCTaGTGTCTAATGAGGTCGATGTCCAGAACCTCACAG | + |
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Preference number: 6 (lower is better) Translates to: ARPWMSTALCSA*CLMRSMSRTSQ Trigger: CTGTGAGGTTCTGGACATCGACCTCATTAGACAGCAGGCCGAGCACAGTGCTGTCGACATCCAAGGTCTGGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS TCA 72 bp | ACATCCCAGAAGGCCTGGTGGACAACACGCTTCACTTaGCCAGCAAGGCTGTTCTCGGGGAGAGCATTTTGC | + |
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Preference number: 6 (lower is better) Translates to: TSQKAWWTTRFT*PARLFSGRAFC Trigger: GCAAAATGCTCTCCCCGAGAACAGCCTTGCTGGTCAAGTGAAGCGTGTTGTCCACCAGGCCTTCTGGGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS CAA 90 bp | TGCTTCCAAGACATCCCAGAAGGCCTGGTGGACAACACGCTTCACTaGACCAGCAAGGCTGTTCTCGGGGAGAGCATTTTGCTTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: CFQDIPEGLVDNTLH*TSKAVLGESILLQL Trigger: CAGCTGAAGCAAAATGCTCTCCCCGAGAACAGCCTTGCTGGTCAAGTGAAGCGTGTTGTCCACCAGGCCTTCTGGGATGTCTTGGAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS GCA 72 bp | CAAGGCCACCTGGCACAGGAGGCATGCTCTTCTGAGTaGTTGGAAGACAGAGCAGGCCTTTCATGTACAACT | + |
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Preference number: 6 (lower is better) Translates to: QGHLAQEACSSE*LEDRAGLSCTT Trigger: AGTTGTACATGAAAGGCCTGCTCTGTCTTCCAAGCACTCAGAAGAGCATGCCTCCTGTGCCAGGTGGCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS GCA 72 bp | CAGAGGGCTCAGGCTAGGCGTGGAGCTATGTTCAGCTaGAGGAGCTACATCAGTCTCAGAAAGCAATTCTTT | + |
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Preference number: 6 (lower is better) Translates to: QRAQARRGAMFS*RSYISLRKQFF Trigger: AAAGAATTGCTTTCTGAGACTGATGTAGCTCCTGCAGCTGAACATAGCTCCACGCCTAGCCTGAGCCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS GCA 72 bp | TGGTCCATACACCTGTTTGTTGAGATTCACAATGTTTaGATACTGGCAGCCAAGCACTTCCAGCTCCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: WSIHLFVEIHNV*ILAAKHFQLPL Trigger: CAGCGGGAGCTGGAAGTGCTTGGCTGCCAGTATGCAAACATTGTGAATCTCAACAAACAGGTGTATGGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS CAA 90 bp | ATGAGGTCCAAGACACGGAAGATTTGTCTCAGCATCTCCACGATGTaGGTGGTAGCTTTCAGCTCTCGGATGTCTTCATCTCTCACAGGA | + |
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Preference number: 6 (lower is better) Translates to: MRSKTRKICLSISTM*VVAFSSRMSSSLTG Trigger: TCCTGTGAGAGATGAAGACATCCGAGAGCTGAAAGCTACCACCAACATCGTGGAGATGCTGAGACAAATCTTCCGTGTCTTGGACCTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS CCA 72 bp | GTGCTTGGAAGACAGAGCAGGCCTTTCATGTACAACTaGATCCGTTTATCCATCAAGGTGCAGACAGGATTG | + |
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Preference number: 6 (lower is better) Translates to: VLGRQSRPFMYN*IRLSIKVQTGL Trigger: CAATCCTGTCTGCACCTTGATGGATAAACGGATCCAGTTGTACATGAAAGGCCTGCTCTGTCTTCCAAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS CCA 72 bp | TACACCTGTTTGTTGAGATTCACAATGTTTGCATACTaGCAGCCAAGCACTTCCAGCTCCCGCTGGATGACA | + |
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Preference number: 6 (lower is better) Translates to: YTCLLRFTMFAY*QPSTSSSRWMT Trigger: TGTCATCCAGCGGGAGCTGGAAGTGCTTGGCTGCCAGTATGCAAACATTGTGAATCTCAACAAACAGGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS CAA 90 bp | CATTCACAGCTATTTCATGAGCGAGAGTCATGTCTGATAAGTTCTTaGCTGCAGCCATCACATCATCAAACATTAAGCCCCGGGGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: HSQLFHERESCLISS*LQPSHHQTLSPGEG Trigger: GCCCTCCCCGGGGCTTAATGTTTGATGATGTGATGGCTGCAGCAAAGAACTTATCAGACATGACTCTCGCTCATGAAATAGCTGTGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS CAA 72 bp | AAGACACGGAAGATTTGTCTCAGCATCTCCACGATGTaGGTGGTAGCTTTCAGCTCTCGGATGTCTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: KTRKICLSISTM*VVAFSSRMSSS Trigger: AGATGAAGACATCCGAGAGCTGAAAGCTACCACCAACATCGTGGAGATGCTGAGACAAATCTTCCGTGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS CAA 72 bp | CATGTCCATTCTCATGAGGTCCAAGACACGGAAGATTaGTCTCAGCATCTCCACGATGTTGGTGGTAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: HVHSHEVQDTED*SQHLHDVGGSF Trigger: AAAGCTACCACCAACATCGTGGAGATGCTGAGACAAATCTTCCGTGTCTTGGACCTCATGAGAATGGACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS TCA 72 bp | CTCTCTTCCAGGGCCTTGTTAACTTCAGCACAAGTCTaGACACCAATAGAATGCAGGGCTTCCTTCAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: LSSRALLTSAQV*TPIECRASFKL Trigger: TAACTTGAAGGAAGCCCTGCATTCTATTGGTGTTCAGACTTGTGCTGAAGTTAACAAGGCCCTGGAAGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS GCA 72 bp | CTTTCATGTACAACTGGATCCGTTTATCCATCAAGGTaGAGACAGGATTGTCCTTCTCTTCAAGGCTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: LSCTTGSVYPSR*RQDCPSLQGWR Trigger: TCTCCAGCCTTGAAGAGAAGGACAATCCTGTCTGCACCTTGATGGATAAACGGATCCAGTTGTACATGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS TCA 72 bp | TATCTATGGACTCTTTCAGCCACTCTGTGGTTTGACTaGGGGCATTTGGAGTTTCTTCTACAACTTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: YLWTLSATLWFD*GHLEFLLQLPG Trigger: TCCAGGAAGTTGTAGAAGAAACTCCAAATGCCCTCAGTCAAACCACAGAGTGGCTGAAAGAGTCCATAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS TCA 72 bp | TGCTTCAGCTGGAAGTTCTCATTCACAGCTATTTCATaGGCGAGAGTCATGTCTGATAAGTTCTTTGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: CFSWKFSFTAIS*ARVMSDKFFAA Trigger: TGCAGCAAAGAACTTATCAGACATGACTCTCGCTCATGAAATAGCTGTGAATGAGAACTTCCAGCTGAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS TCA 72 bp | CTGATTTCTTCAAACAGTTTGATGGCATATTCATACTaGGGAGGCTCAGCACTGAGATCTGCTTCCAAGACA | + |
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Preference number: 6 (lower is better) Translates to: LISSNSLMAYSY*GGSALRSASKT Trigger: TGTCTTGGAAGCAGATCTCAGTGCTGAGCCTCCTCAGTATGAATATGCCATCAAACTGTTTGAAGAAATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS TCA 72 bp | TCTTTATCTATGGACTCTTTCAGCCACTCTGTGGTTTaGCTGAGGGCATTTGGAGTTTCTTCTACAACTTCC | + |
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Preference number: 6 (lower is better) Translates to: SLSMDSFSHSVV*LRAFGVSSTTS Trigger: GGAAGTTGTAGAAGAAACTCCAAATGCCCTCAGTCAAACCACAGAGTGGCTGAAAGAGTCCATAGATAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS CCA 72 bp | CTCTTTCAGCCACTCTGTGGTTTGACTGAGGGCATTTaGAGTTTCTTCTACAACTTCCTGGAATTTGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LFQPLCGLTEGI*SFFYNFLEFVS Trigger: AGAAACAAATTCCAGGAAGTTGTAGAAGAAACTCCAAATGCCCTCAGTCAAACCACAGAGTGGCTGAAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS CAA 72 bp | TTCTTTATCTATGGACTCTTTCAGCCACTCTGTGGTTaGACTGAGGGCATTTGGAGTTTCTTCTACAACTTC | + |
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Preference number: 6 (lower is better) Translates to: FFIYGLFQPLCG*TEGIWSFFYNF Trigger: GAAGTTGTAGAAGAAACTCCAAATGCCCTCAGTCAAACCACAGAGTGGCTGAAAGAGTCCATAGATAAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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| CDS TCA 72 bp | ATATATTTGCATAAAATGGTCCATACACCTGTTTGTTaGGATTCACAATGTTTGCATACTGGCAGCCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: IYLHKMVHTPVC*DSQCLHTGSQA Trigger: TGCTTGGCTGCCAGTATGCAAACATTGTGAATCTCAACAAACAGGTGTATGGACCATTTTATGCAAATATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020223.8 |
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