Pregenerated sensors for TCP11L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027175Ensembl transcript IDs: ENSMUST00000028597.4, ENSMUST00000111118.8
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCTCCCAACCACTGACAGGCCTATGAGCAGGACTCTGGCCTCCTaGAATGCAGAGCCAACCACAGGGCAGAGCAGCAGCAGGCCTATG | + |
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Preference number: 1 (lower is better) Translates to: QLPTTDRPMSRTLAS*NAEPTTGQSSSRPM Trigger: CATAGGCCTGCTGCTGCTCTGCCCTGTGGTTGGCTCTGCATTGCAGGAGGCCAGAGTCCTGCTCATAGGCCTGTCAGTGGTTGGGAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR TCA 90 bp | GCCAGCCAGAGAAGCCTGGGCAAGAAACACTCAGCTCCCAACCACTaGCAGGCCTATGAGCAGGACTCTGGCCTCCTGCAATGCAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: ASQRSLGKKHSAPNH*QAYEQDSGLLQCRA Trigger: GGCTCTGCATTGCAGGAGGCCAGAGTCCTGCTCATAGGCCTGTCAGTGGTTGGGAGCTGAGTGTTTCTTGCCCAGGCTTCTCTGGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR CCA 90 bp | GAGAGCCTGACAAGTCACTGCCTTCCCCTGCCAGCCAGAGAAGCCTaGGCAAGAAACACTCAGCTCCCAACCACTGACAGGCCTATGAGC | + |
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Preference number: 1 (lower is better) Translates to: ESLTSHCLPLPAREA*ARNTQLPTTDRPMS Trigger: GCTCATAGGCCTGTCAGTGGTTGGGAGCTGAGTGTTTCTTGCCCAGGCTTCTCTGGCTGGCAGGGGAAGGCAGTGACTTGTCAGGCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR GCA 90 bp | CCACTGACCCTAAAAAGAGCAAAGAAGGAGAGCCTGACAAGTCACTaGCTTCCCCTGCCAGCCAGAGAAGCCTGGGCAAGAAACACTCAG | + |
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Preference number: 1 (lower is better) Translates to: PLTLKRAKKESLTSH*LPLPAREAWARNTQ Trigger: CTGAGTGTTTCTTGCCCAGGCTTCTCTGGCTGGCAGGGGAAGGCAGTGACTTGTCAGGCTCTCCTTCTTTGCTCTTTTTAGGGTCAGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR TCA 90 bp | CCTGCAATGCAGAGCCAACCACAGGGCAGAGCAGCAGCAGGCCTATaGGCAGGACTTAAGACAGACCATACTGAATACTGCATCTTGCAT | + |
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Preference number: 1 (lower is better) Translates to: PAMQSQPQGRAAAGL*AGLKTDHTEYCILH Trigger: ATGCAAGATGCAGTATTCAGTATGGTCTGTCTTAAGTCCTGCTCATAGGCCTGCTGCTGCTCTGCCCTGTGGTTGGCTCTGCATTGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR GCA 90 bp | AGAAGAACCCACAAAGTAGCAAAGACCAGCTATGGCATGTCCCCGTaGCTGGCTTCATCAGCTTTAACTGCCACAGTCAAGGCTCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: RRTHKVAKTSYGMSP*LASSALTATVKAQE Trigger: TTCCTGAGCCTTGACTGTGGCAGTTAAAGCTGATGAAGCCAGGCACGGGGACATGCCATAGCTGGTCTTTGCTACTTTGTGGGTTCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| 3UTR CCA 90 bp | TGTAACCCTAGCGTTTGTAAGGCAGAGGCAGGAGGATTGGAAGTCTaGGACAGCCTGTTTTACATAAGCAAGTTCCATACCAGCCAGGGG | + |
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Preference number: 1 (lower is better) Translates to: CNPSVCKAEAGGLEV*DSLFYISKFHTSQG Trigger: CCCCTGGCTGGTATGGAACTTGCTTATGTAAAACAGGCTGTCCCAGACTTCCAATCCTCCTGCCTCTGCCTTACAAACGCTAGGGTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| 3UTR CCA 90 bp | AGGTATATAAACACTGGGGCACCAAGAGGCAGGGTGGGTGGCTGCTaGTCATTAAAGGAAGATGGAGAACGGTTGTGGTCTGTTAGTAGC | + |
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Preference number: 1 (lower is better) Translates to: RYINTGAPRGRVGGC*SLKEDGERLWSVSS Trigger: GCTACTAACAGACCACAACCGTTCTCCATCTTCCTTTAATGACCAGCAGCCACCCACCCTGCCTCTTGGTGCCCCAGTGTTTATATACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| 3UTR TCA 90 bp | TTGGCTTATGATGCGGGCACAGAGCATCTGAGAAAGAATGACTTTTaGGAGACAACTGTCTCGGGTTTCTTGGGAGAAGCGGCTCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: LAYDAGTEHLRKNDF*ETTVSGFLGEAAPP Trigger: TGGAGGAGCCGCTTCTCCCAAGAAACCCGAGACAGTTGTCTCTCAAAAGTCATTCTTTCTCAGATGCTCTGTGCCCGCATCATAAGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| 3UTR TCA 90 bp | TATTCTTACAGTTGGGAAAGGGCCTTTGGGGTCTGGCAGCAGAAATaGCAAGCCATCTCAGCTAAGGGGCAGCATGCTGAGCAAAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: YSYSWERAFGVWQQK*QAISAKGQHAEQRN Trigger: GTTTCTTTGCTCAGCATGCTGCCCCTTAGCTGAGATGGCTTGTCATTTCTGCTGCCAGACCCCAAAGGCCCTTTCCCAACTGTAAGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR GCA 90 bp | AGAAGGTATATAAACACTGGGGCACCAAGAGGCAGGGTGGGTGGCTaGTGGTCATTAAAGGAAGATGGAGAACGGTTGTGGTCTGTTAGT | + |
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Preference number: 1 (lower is better) Translates to: RRYINTGAPRGRVGG*WSLKEDGERLWSVS Trigger: ACTAACAGACCACAACCGTTCTCCATCTTCCTTTAATGACCAGCAGCCACCCACCCTGCCTCTTGGTGCCCCAGTGTTTATATACCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| 3UTR GCA 90 bp | AGAGATTCACCTCCCTCTGCCTTCCAAGTACTGGGACTAAAGGTGTaGACCACCACACCTGAGTTTAAGTTGGAATCTCTGGTTCCTAAG | + |
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Preference number: 1 (lower is better) Translates to: RDSPPSAFQVLGLKV*TTTPEFKLESLVPK Trigger: CTTAGGAACCAGAGATTCCAACTTAAACTCAGGTGTGGTGGTGCACACCTTTAGTCCCAGTACTTGGAAGGCAGAGGGAGGTGAATCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| 3UTR GCA 90 bp | AGAAGGCCTACACGTCCCAGGGTGTATAAGCAAGGTGGCAAAAGCTaGCACAGGGTTCAGAAATGCAGATCCAAAAGAGATATCCAAGGT | + |
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Preference number: 1 (lower is better) Translates to: RRPTRPRVYKQGGKS*HRVQKCRSKRDIQG Trigger: ACCTTGGATATCTCTTTTGGATCTGCATTTCTGAACCCTGTGGCAGCTTTTGCCACCTTGCTTATACACCCTGGGACGTGTAGGCCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR CCA 90 bp | CTGCCACAGGGTTCAGAAATGCAGATCCAAAAGAGATATCCAAGGTaGGAATATTCTTACAGTTGGGAAAGGGCCTTTGGGGTCTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: LPQGSEMQIQKRYPR*EYSYSWERAFGVWQ Trigger: CTGCCAGACCCCAAAGGCCCTTTCCCAACTGTAAGAATATTCCCACCTTGGATATCTCTTTTGGATCTGCATTTCTGAACCCTGTGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR CCA 90 bp | GAGTTTAAGTTGGAATCTCTGGTTCCTAAGCTGCTCCTGAGCTCCTaGGCACAAACAATTCTTCTACCTTTTAAAACGGAAGCTCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: EFKLESLVPKLLLSS*AQTILLPFKTEAPG Trigger: CCCTGGAGCTTCCGTTTTAAAAGGTAGAAGAATTGTTTGTGCCCAGGAGCTCAGGAGCAGCTTAGGAACCAGAGATTCCAACTTAAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| 3UTR TCA 90 bp | CCACACCTGAGTTTAAGTTGGAATCTCTGGTTCCTAAGCTGCTCCTaGGCTCCTGGGCACAAACAATTCTTCTACCTTTTAAAACGGAAG | + |
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Preference number: 1 (lower is better) Translates to: PHLSLSWNLWFLSCS*APGHKQFFYLLKRK Trigger: CTTCCGTTTTAAAAGGTAGAAGAATTGTTTGTGCCCAGGAGCTCAGGAGCAGCTTAGGAACCAGAGATTCCAACTTAAACTCAGGTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| 3UTR GCA 90 bp | GATCTCATAATGGCCAGTCCATTAACTTTGAGAAATACAGTACTTTaGACTGGGAAGCAGAGCGAGCAGTTTCTAGGGGCAATGGTTTTC | + |
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Preference number: 1 (lower is better) Translates to: DLIMASPLTLRNTVL*TGKQSEQFLGAMVF Trigger: GAAAACCATTGCCCCTAGAAACTGCTCGCTCTGCTTCCCAGTGCAAAGTACTGTATTTCTCAAAGTTAATGGACTGGCCATTATGAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR GCA 90 bp | AGGGTGTATAAGCAAGGTGGCAAAAGCTGCCACAGGGTTCAGAAATaGAGATCCAAAAGAGATATCCAAGGTGGGAATATTCTTACAGTT | + |
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Preference number: 1 (lower is better) Translates to: RVYKQGGKSCHRVQK*RSKRDIQGGNILTV Trigger: AACTGTAAGAATATTCCCACCTTGGATATCTCTTTTGGATCTGCATTTCTGAACCCTGTGGCAGCTTTTGCCACCTTGCTTATACACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR TCA 90 bp | CGCTCTGCTGTTAGTTTCCCTACATCAAAGACTATTCCAGTACAATaGACAGGAGGGTTTGGAAGTCCTGGAAAATATATGTTCTGGCAA | + |
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Preference number: 1 (lower is better) Translates to: RSAVSFPTSKTIPVQ*TGGFGSPGKYMFWQ Trigger: TTGCCAGAACATATATTTTCCAGGACTTCCAAACCCTCCTGTTCATTGTACTGGAATAGTCTTTGATGTAGGGAAACTAACAGCAGAGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| 3UTR CCA 90 bp | CATAATGGCCAGTCCATTAACTTTGAGAAATACAGTACTTTGCACTaGGAAGCAGAGCGAGCAGTTTCTAGGGGCAATGGTTTTCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: HNGQSINFEKYSTLH*EAERAVSRGNGFLK Trigger: TTTAAGAAAACCATTGCCCCTAGAAACTGCTCGCTCTGCTTCCCAGTGCAAAGTACTGTATTTCTCAAAGTTAATGGACTGGCCATTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR CCA 90 bp | GCATTAAGTCAGCCTATACACTCTAAGGATGTAGTAAAATCAGAATaGAAGGAAGTCAGTGAAGGGTTTGCATTGGAGACACAAATTTGT | + |
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Preference number: 1 (lower is better) Translates to: ALSQPIHSKDVVKSE*KEVSEGFALETQIC Trigger: ACAAATTTGTGTCTCCAATGCAAACCCTTCACTGACTTCCTTCCATTCTGATTTTACTACATCCTTAGAGTGTATAGGCTGACTTAATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR-3UTR TCA 90 bp | GTAAACGGGACAAGAGGACAAATCTTGGCTTATGATGCGGGCACAGAGCATCTGCGGGGTCTCAGGAGATaGGAGCTGCTGTGGCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: VNGTRGQILAYDAGTEHLRGLRR*ELLWQL Trigger: CAGCTGCCACAGCAGCTCTCATCTCCTGAGACCCCG...CAGATGCTCTGTGCCCGCATCATAAGCCAAGATTTGTCCTCTTGTCCCGTTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGAGACGGGGTTTCTCTGTGTATCCCTAGCTGGCCTGGAACTCCTCCTTCTATTCCTAAGCTGCTCCTaGGCTCCTGGGCACAAACAA | + |
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Preference number: 2 (lower is better) Translates to: CETGFLCVSLAGLELLLLFLSCS*APGHKQ Trigger: TTGTTTGTGCCCAGGAGCTCAGGAGCAGCTTAGGAA...TAGAAGGAGGAGTTCCAGGCCAGCTAGGGATACACAGAGAAACCCCGTCTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGCTGCTGGTCATTAAAGGAAGATGGAGAACGGTTGTGGTCTGTTAGTAGCAGCAAAGACCAGCTATaGCATGTCCCCGTGCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: GGCWSLKEDGERLWSVSSSKDQL*HVPVPG Trigger: GCCAGGCACGGGGACATGCCATAGCTGGTCTTTGCT...GCTACTAACAGACCACAACCGTTCTCCATCTTCCTTTAATGACCAGCAGCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| 3UTR-3UTR TCA 90 bp | GCCTCGTGCAGGCTAGGCGATCACTGGCCACTGTACTACATACAAGTTGACAAACGGGCACAGAGCATCTaGGAAAGAATGACTTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: ASCRLGDHWPLYYIQVDKRAQSI*ERMTFE Trigger: CTCAAAAGTCATTCTTTCTCAGATGCTCTGTGCCCG...TTTGTCAACTTGTATGTAGTACAGTGGCCAGTGATCGCCTAGCCTGCACGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCCTAGCTGGCCTGGAACTCCTCCTTCTATTGACCAAACTGGTCTAGAACTCATCCATTGGGTATGGTaGCAGAGGCCTGTAACCCTA | + |
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Preference number: 2 (lower is better) Translates to: IPSWPGTPPSIDQTGLELIHWVW*QRPVTL Trigger: TAGGGTTACAGGCCTCTGCCACCATACCCAATGGAT...GAGTTCTAGACCAGTTTGGTCAATAGAAGGAGGAGTTCCAGGCCAGCTAGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCCTAGCTGGCCTGGAACTCCTCCTTCTATTGACCAAACTGGTCTAGAACTCCGGGCACAGAGCATCTaGGAAAGAATGACTTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: IPSWPGTPPSIDQTGLELRAQSI*ERMTFE Trigger: CTCAAAAGTCATTCTTTCTCAGATGCTCTGTGCCCG...GAGTTCTAGACCAGTTTGGTCAATAGAAGGAGGAGTTCCAGGCCAGCTAGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| 3UTR-3UTR GCA 90 bp | GTAAACGGGACAAGAGGACAAATCTTGGCTTATGATGCGGGCACAGAGCATCTGCAAAACAGAATCCAGTaGATCCTTCAGTCCCGTGGA | + |
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Preference number: 2 (lower is better) Translates to: VNGTRGQILAYDAGTEHLQNRIQ*ILQSRG Trigger: TCCACGGGACTGAAGGATGCACTGGATTCTGTTTTG...CAGATGCTCTGTGCCCGCATCATAAGCCAAGATTTGTCCTCTTGTCCCGTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| 3UTR-3UTR TCA 90 bp | TCTATAACCGTGGTGTTTGGAATTCTGGGAACTTTTCAGAAGGTATATAAACACCGGGGTCTCAGGAGATaGGAGCTGCTGTGGCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: SITVVFGILGTFQKVYKHRGLRR*ELLWQL Trigger: CAGCTGCCACAGCAGCTCTCATCTCCTGAGACCCCG...GTGTTTATATACCTTCTGAAAAGTTCCCAGAATTCCAAACACCACGGTTATAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| 3UTR-3UTR GCA 90 bp | GACCATACTGAATACTGCATCTTGCATGCCCAAGTTGGGGCTGCAAGCCAAAAGAGAAATACAGTACTTTaGACTGGGAAGCAGAGCGAG | + |
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Preference number: 2 (lower is better) Translates to: DHTEYCILHAQVGAASQKRNTVL*TGKQSE Trigger: CTCGCTCTGCTTCCCAGTGCAAAGTACTGTATTTCT...CTTTTGGCTTGCAGCCCCAACTTGGGCATGCAAGATGCAGTATTCAGTATGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR-3UTR CCA 90 bp | GCGAGGTTTGACCTCCCAAAGATTCATTGTGCATCCAGGAATTATAGATCAGATCTGTCTCGGGTTTCTTaGGAGAAGCGGCTCCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: ARFDLPKIHCASRNYRSDLSRVS*EKRLLQ Trigger: TTGGAGGAGCCGCTTCTCCCAAGAAACCCGAGACAG...ATCTGATCTATAATTCCTGGATGCACAATGAATCTTTGGGAGGTCAAACCTCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCCTAGCTGGCCTGGAACTCCTCCTTCTATTGACCAAACTGGTCTAGAACTCAGAAAGAATGACTTTTaGGAGACAACTGTCTCGGGT | + |
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Preference number: 2 (lower is better) Translates to: IPSWPGTPPSIDQTGLELRKNDF*ETTVSG Trigger: ACCCGAGACAGTTGTCTCTCAAAAGTCATTCTTTCT...GAGTTCTAGACCAGTTTGGTCAATAGAAGGAGGAGTTCCAGGCCAGCTAGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| 3UTR-3UTR TCA 90 bp | GCGAGGTTTGACCTCCCAAAGATTCATTGTGCATCCAGGAATTATAGATCAGATTTCCTAAGCTGCTCCTaGGCTCCTGGGCACAAACAA | + |
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Preference number: 2 (lower is better) Translates to: ARFDLPKIHCASRNYRSDFLSCS*APGHKQ Trigger: TTGTTTGTGCCCAGGAGCTCAGGAGCAGCTTAGGAA...ATCTGATCTATAATTCCTGGATGCACAATGAATCTTTGGGAGGTCAAACCTCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR-3UTR GCA 90 bp | TTATGGCTTCTTAATACAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATCCTGGCTATAGACAGCCCTaGCATAAAGCACCCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: LWLLNTGVCVCVCVCVHPGYRQP*HKAPTG Trigger: TCCTGTGGGTGCTTTATGGCAGGGCTGTCTATAGCC...AGGATGTACACACACACACACACACACACACACACCTGTATTAAGAAGCCATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGACCATACTGAATACTGCATCTTGCATGCCCAAGTTGGGGCTGCAAGCCAAGTAAATACGGTCATTTaGAGAGACTGTGACCAAACC | + |
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Preference number: 2 (lower is better) Translates to: TDHTEYCILHAQVGAASQVNTVI*RDCDQT Trigger: GGTTTGGTCACAGTCTCTGCAAATGACCGTATTTAC...TTGGCTTGCAGCCCCAACTTGGGCATGCAAGATGCAGTATTCAGTATGGTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR-3UTR CCA 90 bp | GACCATACTGAATACTGCATCTTGCATGCCCAAGTTGGGGCTGCAAGCCAAAAGCACCTGAGTTTAAGTTaGAATCTCTGGTTCCTAAGC | + |
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Preference number: 2 (lower is better) Translates to: DHTEYCILHAQVGAASQKHLSLS*NLWFLS Trigger: GCTTAGGAACCAGAGATTCCAACTTAAACTCAGGTG...CTTTTGGCTTGCAGCCCCAACTTGGGCATGCAAGATGCAGTATTCAGTATGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR CAA 90 bp | AATGCAGATCCAAAAGAGATATCCAAGGTGGGAATATTCTTACAGTaGGGAAAGGGCCTTTGGGGTCTGGCAGCAGAAATGACAAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: NADPKEISKVGIFLQ*GKGLWGLAAEMTSH Trigger: ATGGCTTGTCATTTCTGCTGCCAGACCCCAAAGGCCCTTTCCCAACTGTAAGAATATTCCCACCTTGGATATCTCTTTTGGATCTGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGACCATACTGAATACTGCATCTTGCATGCCCAAGTTGGGGCTGCAAGCCAAAACCTCTCACTCTCCTaGAAAACTCAAGTGTTACAT | + |
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Preference number: 2 (lower is better) Translates to: TDHTEYCILHAQVGAASQNLSLS*KTQVLH Trigger: ATGTAACACTTGAGTTTTTCAGGAGAGTGAGAGGTT...TTGGCTTGCAGCCCCAACTTGGGCATGCAAGATGCAGTATTCAGTATGGTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR-3UTR CCA 90 bp | TTAATACAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATCCTTTGTTGTTTACAGAGGCAGGAGGATTaGAAGTCTGGGACAGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LIQVCVCVCVCVYILCCLQRQED*KSGTAC Trigger: ACAGGCTGTCCCAGACTTCCAATCCTCCTGCCTCTG...TAAACAACAAAGGATGTACACACACACACACACACACACACACACCTGTATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGCTTCAACTGTGGTAAATACGGTCATTTGCAGAGACTGTGACCAAACCAAACAAAACAGAATCCAGTaGATCCTTCAGTCCCGTGGA | + |
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Preference number: 2 (lower is better) Translates to: CASTVVNTVICRDCDQTKQNRIQ*ILQSRG Trigger: TCCACGGGACTGAAGGATGCACTGGATTCTGTTTTG...TTTGGTTTGGTCACAGTCTCTGCAAATGACCGTATTTACCACAGTTGAAGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGCTTGGCTGTTAGTGTTGGTGTCCTCCTGTACTTCTGGGAACAGAAGAGGAAATCAAAATGCCCTGTaGTTCAACTGTGGTAAATAC | + |
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Preference number: 2 (lower is better) Translates to: TAWLLVLVSSCTSGNRRGNQNAL*FNCGKY Trigger: GTATTTACCACAGTTGAAGCACAGGGCATTTTGATT...TCCTCTTCTGTTCCCAGAAGTACAGGAGGACACCAACACTAACAGCCAAGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR-3UTR CCA 90 bp | GACCATACTGAATACTGCATCTTGCATGCCCAAGTTGGGGCTGCAAGCCAAAAGAAGAGATATCCAAGGTaGGAATATTCTTACAGTTGG | + |
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Preference number: 2 (lower is better) Translates to: DHTEYCILHAQVGAASQKKRYPR*EYSYSW Trigger: CCAACTGTAAGAATATTCCCACCTTGGATATCTCTT...CTTTTGGCTTGCAGCCCCAACTTGGGCATGCAAGATGCAGTATTCAGTATGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR CAA 90 bp | AGATCTCATAATGGCCAGTCCATTAACTTTGAGAAATACAGTACTTaGCACTGGGAAGCAGAGCGAGCAGTTTCTAGGGGCAATGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: RSHNGQSINFEKYST*HWEAERAVSRGNGF Trigger: AAAACCATTGCCCCTAGAAACTGCTCGCTCTGCTTCCCAGTGCAAAGTACTGTATTTCTCAAAGTTAATGGACTGGCCATTATGAGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR CAA 90 bp | ACCAAACCAAAAGCCTCAGATCTCATAATGGCCAGTCCATTAACTTaGAGAAATACAGTACTTTGCACTGGGAAGCAGAGCGAGCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: TKPKASDLIMASPLT*RNTVLCTGKQSEQF Trigger: AAACTGCTCGCTCTGCTTCCCAGTGCAAAGTACTGTATTTCTCAAAGTTAATGGACTGGCCATTATGAGATCTGAGGCTTTTGGTTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
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| 3UTR-3UTR GCA 90 bp | TCTATAACCGTGGTGTTTGGAATTCTGGGAACTTTTCAGAAGGTATATAAACACTATGGCATGTCCCCGTaGCTGGCTTCATCAGCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: SITVVFGILGTFQKVYKHYGMSP*LASSAL Trigger: TAAAGCTGATGAAGCCAGGCACGGGGACATGCCATA...GTGTTTATATACCTTCTGAAAAGTTCCCAGAATTCCAAACACCACGGTTATAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGTGAAGGGTTTGCATTGGAGACACAAATTTGTTTATATTTCCACAGGAAATAAGAGGCAGGGTGGGTaGCTGCTGGTCATTAAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SVKGLHWRHKFVYISTGNKRQGG*LLVIKG Trigger: TCCTTTAATGACCAGCAGCCACCCACCCTGCCTCTT...ATTTCCTGTGGAAATATAAACAAATTTGTGTCTCCAATGCAAACCCTTCACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGTGAAGGGTTTGCATTGGAGACACAAATTTGTTTATATTTCCACAGGAAATATCCATTGGGTATGGTaGCAGAGGCCTGTAACCCTA | + |
|
Preference number: 2 (lower is better) Translates to: SVKGLHWRHKFVYISTGNIHWVW*QRPVTL Trigger: TAGGGTTACAGGCCTCTGCCACCATACCCAATGGAT...ATTTCCTGTGGAAATATAAACAAATTTGTGTCTCCAATGCAAACCCTTCACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR-3UTR CCA 90 bp | GCGAGGTTTGACCTCCCAAAGATTCATTGTGCATCCAGGAATTATAGATCAGATAGGGTTTGGAAGTCCTaGAAAATATATGTTCTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: ARFDLPKIHCASRNYRSDRVWKS*KIYVLA Trigger: TGCCAGAACATATATTTTCCAGGACTTCCAAACCCT...ATCTGATCTATAATTCCTGGATGCACAATGAATCTTTGGGAGGTCAAACCTCGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR-3UTR CCA 90 bp | ATACACTCTAAGGATGTAGTAAAATCAGAATGGAAGGAAGTCAGTGAAGGGTTTCCTGTTAGAACTGCTTaGCTGTTAGTGTTGGTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: IHSKDVVKSEWKEVSEGFPVRTA*LLVLVS Trigger: GGACACCAACACTAACAGCCAAGCAGTTCTAACAGG...AAACCCTTCACTGACTTCCTTCCATTCTGATTTTACTACATCCTTAGAGTGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR CAA 90 bp | GTTTCCCTACATCAAAGACTATTCCAGTACAATGAACAGGAGGGTTaGGAAGTCCTGGAAAATATATGTTCTGGCAAACAGCTGTTAATG | + |
|
Preference number: 2 (lower is better) Translates to: VSLHQRLFQYNEQEG*EVLENICSGKQLLM Trigger: CATTAACAGCTGTTTGCCAGAACATATATTTTCCAGGACTTCCAAACCCTCCTGTTCATTGTACTGGAATAGTCTTTGATGTAGGGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGTGAAGGGTTTGCATTGGAGACACAAATTTGTTTATATTTCCACAGGAAATTGGTGTTTGGAATTCTaGGAACTTTTCAGAAGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: SVKGLHWRHKFVYISTGNWCLEF*ELFRRY Trigger: ATACCTTCTGAAAAGTTCCCAGAATTCCAAACACCA...ATTTCCTGTGGAAATATAAACAAATTTGTGTCTCCAATGCAAACCCTTCACTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR GCA 72 bp | ACCACTGACAGGCCTATGAGCAGGACTCTGGCCTCCTaGAATGCAGAGCCAACCACAGGGCAGAGCAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TTDRPMSRTLAS*NAEPTTGQSSS Trigger: GCTGCTGCTCTGCCCTGTGGTTGGCTCTGCATTGCAGGAGGCCAGAGTCCTGCTCATAGGCCTGTCAGTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR TCA 72 bp | AGAAGCCTGGGCAAGAAACACTCAGCTCCCAACCACTaGCAGGCCTATGAGCAGGACTCTGGCCTCCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: RSLGKKHSAPNH*QAYEQDSGLLQ Trigger: TTGCAGGAGGCCAGAGTCCTGCTCATAGGCCTGTCAGTGGTTGGGAGCTGAGTGTTTCTTGCCCAGGCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR TCA 72 bp | CAAGAAACACTCAGCTCCCAACCACTGACAGGCCTATaGGCAGGACTCTGGCCTCCTGCAATGCAGAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: QETLSSQPLTGL*AGLWPPAMQSQ Trigger: TTGGCTCTGCATTGCAGGAGGCCAGAGTCCTGCTCATAGGCCTGTCAGTGGTTGGGAGCTGAGTGTTTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR GCA 72 bp | CTAAAAAGAGCAAAGAAGGAGAGCCTGACAAGTCACTaGCTTCCCCTGCCAGCCAGAGAAGCCTGGGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LKRAKKESLTSH*LPLPAREAWAR Trigger: TCTTGCCCAGGCTTCTCTGGCTGGCAGGGGAAGGCAGTGACTTGTCAGGCTCTCCTTCTTTGCTCTTTTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGCTGCTGGTCATTAAAGGAAGATGGAGAACGGTTGTGGTCTGTTAGTAGCACTGTCTCGGGTTTCTaGGGAGAAGCGGCTCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GGCWSLKEDGERLWSVSSTVSGF*GEAAPP Trigger: TGGAGGAGCCGCTTCTCCCAAGAAACCCGAGACAGT...GCTACTAACAGACCACAACCGTTCTCCATCTTCCTTTAATGACCAGCAGCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCCCTAGCTGGCCTGGAACTCCTCCTTCTATTGACCAAACTGGTCTAGAACTCAGAGGCAGCCAACTGTaGAAGGCTCTGAGCTCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: IPSWPGTPPSIDQTGLELRGSQL*KALSSY Trigger: GTAGGAGCTCAGAGCCTTCAACAGTTGGCTGCCTCT...GAGTTCTAGACCAGTTTGGTCAATAGAAGGAGGAGTTCCAGGCCAGCTAGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| 3UTR GCA 72 bp | CCAAACTGGTCTAGAACTCAGAGATTCACCTCCCTCTaGCTTCCAAGTACTGGGACTAAAGGTGTGCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: PNWSRTQRFTSL*LPSTGTKGVHH Trigger: GTGGTGCACACCTTTAGTCCCAGTACTTGGAAGGCAGAGGGAGGTGAATCTCTGAGTTCTAGACCAGTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| 3UTR CCA 72 bp | GTATATAAACACTGGGGCACCAAGAGGCAGGGTGGGTaGCTGCTGGTCATTAAAGGAAGATGGAGAACGGTT | + |
|
Preference number: 3 (lower is better) Translates to: VYKHWGTKRQGG*LLVIKGRWRTV Trigger: AACCGTTCTCCATCTTCCTTTAATGACCAGCAGCCACCCACCCTGCCTCTTGGTGCCCCAGTGTTTATATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGCTGCTGGTCATTAAAGGAAGATGGAGAACGGTTGTGGTCTGTTAGTAGCATCAAGTTCTATCCATaGGGTATGGTGGCAGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: GGCWSLKEDGERLWSVSSIKFYP*GMVAEA Trigger: GGCCTCTGCCACCATACCCAATGGATAGAACTTGAT...GCTACTAACAGACCACAACCGTTCTCCATCTTCCTTTAATGACCAGCAGCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| 3UTR TCA 72 bp | GATGCGGGCACAGAGCATCTGAGAAAGAATGACTTTTaGGAGACAACTGTCTCGGGTTTCTTGGGAGAAGCG | + |
|
Preference number: 3 (lower is better) Translates to: DAGTEHLRKNDF*ETTVSGFLGEA Trigger: CGCTTCTCCCAAGAAACCCGAGACAGTTGTCTCTCAAAAGTCATTCTTTCTCAGATGCTCTGTGCCCGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| 3UTR CCA 72 bp | AAGGTGGGAATATTCTTACAGTTGGGAAAGGGCCTTTaGGGTCTGGCAGCAGAAATGACAAGCCATCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: KVGIFLQLGKGL*GLAAEMTSHLS Trigger: GCTGAGATGGCTTGTCATTTCTGCTGCCAGACCCCAAAGGCCCTTTCCCAACTGTAAGAATATTCCCACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR CCA 72 bp | ACTGCTCTCTGGGAATGCTTACCTGTTAGAACTGCTTaGCTGTTAGTGTTGGTGTCCTCCTGTACTTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: TALWECLPVRTA*LLVLVSSCTSG Trigger: CCCAGAAGTACAGGAGGACACCAACACTAACAGCCAAGCAGTTCTAACAGGTAAGCATTCCCAGAGAGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR GCA 72 bp | CAGGACTTAAGACAGACCATACTGAATACTGCATCTTaGATGCCCAAGTTGGGGCTGCAAGCCAAAAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: QDLRQTILNTAS*MPKLGLQAKSS Trigger: TGAGCTTTTGGCTTGCAGCCCCAACTTGGGCATGCAAGATGCAGTATTCAGTATGGTCTGTCTTAAGTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR CCA 72 bp | AGCGTTTGTAAGGCAGAGGCAGGAGGATTGGAAGTCTaGGACAGCCTGTTTTACATAAGCAAGTTCCATACC | + |
|
Preference number: 3 (lower is better) Translates to: SVCKAEAGGLEV*DSLFYISKFHT Trigger: GGTATGGAACTTGCTTATGTAAAACAGGCTGTCCCAGACTTCCAATCCTCCTGCCTCTGCCTTACAAACGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| 3UTR-3UTR CAA 90 bp | TTATGGCTTCTTAATACAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATCCTAGAGGCAGCCAACTGTaGAAGGCTCTGAGCTCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: LWLLNTGVCVCVCVCVHPRGSQL*KALSSY Trigger: GTAGGAGCTCAGAGCCTTCAACAGTTGGCTGCCTCT...AGGATGTACACACACACACACACACACACACACACCTGTATTAAGAAGCCATAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTATAACCGTGGTGTTTGGAATTCTGGGAACTTTTCAGAAGGTATATAAACACACTGTCTCGGGTTTCTaGGGAGAAGCGGCTCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SITVVFGILGTFQKVYKHTVSGF*GEAAPP Trigger: TGGAGGAGCCGCTTCTCCCAAGAAACCCGAGACAGT...GTGTTTATATACCTTCTGAAAAGTTCCCAGAATTCCAAACACCACGGTTATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| 3UTR-3UTR CAA 90 bp | GACCATACTGAATACTGCATCTTGCATGCCCAAGTTGGGGCTGCAAGCCAAAAGAATGAACAGGAGGGTTaGGAAGTCCTGGAAAATATA | + |
|
Preference number: 3 (lower is better) Translates to: DHTEYCILHAQVGAASQKNEQEG*EVLENI Trigger: TATATTTTCCAGGACTTCCAAACCCTCCTGTTCATT...CTTTTGGCTTGCAGCCCCAACTTGGGCATGCAAGATGCAGTATTCAGTATGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR TCA 72 bp | GACAAATCTTGGCTTATGATGCGGGCACAGAGCATCTaGGAAAGAATGACTTTTGAGAGACAACTGTCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: DKSWLMMRAQSI*ERMTFERQLSR Trigger: CCGAGACAGTTGTCTCTCAAAAGTCATTCTTTCTCAGATGCTCTGTGCCCGCATCATAAGCCAAGATTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| 3UTR GCA 72 bp | TGCACTCATACATACGGTCCTCAAAACAGAATCCAGTaGATCCTTCAGTCCCGTGGAATCAGCGCTATTAAT | + |
|
Preference number: 3 (lower is better) Translates to: CTHTYGPQNRIQ*ILQSRGISAIN Trigger: ATTAATAGCGCTGATTCCACGGGACTGAAGGATGCACTGGATTCTGTTTTGAGGACCGTATGTATGAGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| 3UTR GCA 72 bp | ATGCCCTGTGCTTCAACTGTGGTAAATACGGTCATTTaGAGAGACTGTGACCAAACCAAAAGCCTCAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: MPCASTVVNTVI*RDCDQTKSLRS Trigger: AGATCTGAGGCTTTTGGTTTGGTCACAGTCTCTGCAAATGACCGTATTTACCACAGTTGAAGCACAGGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR CCA 72 bp | CAGTCCATTAACTTTGAGAAATACAGTACTTTGCACTaGGAAGCAGAGCGAGCAGTTTCTAGGGGCAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: QSINFEKYSTLH*EAERAVSRGNG Trigger: ACCATTGCCCCTAGAAACTGCTCGCTCTGCTTCCCAGTGCAAAGTACTGTATTTCTCAAAGTTAATGGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR CCA 72 bp | GGTTCAGAAATGCAGATCCAAAAGAGATATCCAAGGTaGGAATATTCTTACAGTTGGGAAAGGGCCTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GSEMQIQKRYPR*EYSYSWERAFG Trigger: CCCAAAGGCCCTTTCCCAACTGTAAGAATATTCCCACCTTGGATATCTCTTTTGGATCTGCATTTCTGAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR CCA 72 bp | GGCTGCTGGTCATTAAAGGAAGATGGAGAACGGTTGTaGTCTGTTAGTAGCCACAGTCAAAAGAAAACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GCWSLKEDGERL*SVSSHSQKKTK Trigger: TTTTGTTTTCTTTTGACTGTGGCTACTAACAGACCACAACCGTTCTCCATCTTCCTTTAATGACCAGCAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| 3UTR CCA 72 bp | ACAGGAGGGTTTGGAAGTCCTGGAAAATATATGTTCTaGCAAACAGCTGTTAATGATCAGAAGCCAAAATTA | + |
|
Preference number: 3 (lower is better) Translates to: TGGFGSPGKYMF*QTAVNDQKPKL Trigger: TAATTTTGGCTTCTGATCATTAACAGCTGTTTGCCAGAACATATATTTTCCAGGACTTCCAAACCCTCCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| 3UTR CCA 72 bp | AAAATAAACAAAAGCTACAGTAGACCATTAAAGACATaGGCAGTGCCTGAGGATGAACTGATAAGGGATATG | + |
|
Preference number: 3 (lower is better) Translates to: KINKSYSRPLKT*AVPEDELIRDM Trigger: CATATCCCTTATCAGTTCATCCTCAGGCACTGCCCATGTCTTTAATGGTCTACTGTAGCTTTTGTTTATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| CDS-3UTR TCA 90 bp | GCCGCCATTCTCCGAAGCCCGGCACAGCACTGCGAGGGCGAGCGAGCGGGGTCTCGAGCGGGACTGGAGTaGGGTCTTCCCACTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AAILRSPAQHCEGERAGSRAGLE*GLPTLW Trigger: CCAAAGAGTGGGAAGACCTCACTCCAGTCCCGCTCG...AGACCCCGCTCGCTCGCCCTCGCAGTGCTGTGCCGGGCTTCGGAGAATGGCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR GCA 90 bp | GCCGCCATTCTCCGAAGCCCGGCACAGCACTGCGAGGGCGAGCGAGCGGGGTCTTGGAAGGAAGGCAGATaGATGTCCGTTAGCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AAILRSPAQHCEGERAGSWKEGR*MSVSRV Trigger: GACTCTGCTAACGGACATGCATCTGCCTTCCTTCCA...AGACCCCGCTCGCTCGCCCTCGCAGTGCTGTGCCGGGCTTCGGAGAATGGCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCCGGCACAGCACTGCGAGGGCGAGCGAGCGGGGTCTCAGGAGATGAGAGCTCTTCCAGCTCTTTCTaGATGGGACCCAATCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KPGTALRGRASGVSGDESSSSSF*MGPNPP Trigger: TGGGGGATTGGGTCCCATTCAGAAAGAGCTGGAAGA...GCTCTCATCTCCTGAGACCCCGCTCGCTCGCCCTCGCAGTGCTGTGCCGGGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCCGGCACAGCACTGCGAGGGCGAGCGAGCGGGGTCTCAGGAGATGAGAGCGGTCTTCCCACTCTTTaGGAACTAGGTGAGTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: KPGTALRGRASGVSGDESGLPTL*ELGESD Trigger: GTCGGACTCACCTAGTTCCCAAAGAGTGGGAAGACC...GCTCTCATCTCCTGAGACCCCGCTCGCTCGCCCTCGCAGTGCTGTGCCGGGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCCGGCACAGCACTGCGAGGGCGAGCGAGCGGGGTCTCAGGAGATGAGAGCCTCTCCAGCACTTCCTaGAACTTCCTCCTCTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: KPGTALRGRASGVSGDESLSSTS*NFLLSY Trigger: GTATGAGAGGAGGAAGTTTCAGGAAGTGCTGGAGAG...GCTCTCATCTCCTGAGACCCCGCTCGCTCGCCCTCGCAGTGCTGTGCCGGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR TCA 90 bp | TGTGAGACGGGGTTTCTCTGTGTATCCCTAGCTGGCCTGGAACTCCTCCTTCTAGGACTGGCGAGGGCCTaGATCTGGCCCTTGAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: CETGFLCVSLAGLELLLLGLARA*IWPLST Trigger: CGTGCTCAAGGGCCAGATTCAGGCCCTCGCCAGTCC...TAGAAGGAGGAGTTCCAGGCCAGCTAGGGATACACAGAGAAACCCCGTCTCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR GCA 90 bp | ATGACTTTTGAGAGACAACTGTCTCGGGTTTCTTGGGAGAAGCGGCTCCTCCAACCCAGGACGGCCAGCTaGTCCAGCTGGAGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MTFERQLSRVSWEKRLLQPRTAS*SSWSWS Trigger: GCTCCAGCTCCAGCTGGAGCAGCTGGCCGTCCTGGG...TTGGAGGAGCCGCTTCTCCCAAGAAACCCGAGACAGTTGTCTCTCAAAAGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR GCA 90 bp | GACCATACTGAATACTGCATCTTGCATGCCCAAGTTGGGGCTGCAAGCCAAAAGCCCAGGACGGCCAGCTaGTCCAGCTGGAGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DHTEYCILHAQVGAASQKPRTAS*SSWSWS Trigger: GCTCCAGCTCCAGCTGGAGCAGCTGGCCGTCCTGGG...CTTTTGGCTTGCAGCCCCAACTTGGGCATGCAAGATGCAGTATTCAGTATGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCTGAGACAGAGGCAGCCAACTGTTGAAGGCTCTGAGCTCCTACTCAAGAGCGCCTCCCCCAGCTaGCAGGGCATGTTTGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: QRLRQRQPTVEGSELLLKSASPS*QGMFVL Trigger: AAGTACAAACATGCCCTGCCAGCTGGGGGAGGCGCT...CTTGAGTAGGAGCTCAGAGCCTTCAACAGTTGGCTGCCTCTGTCTCAGCCTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR TCA 90 bp | ACTGCTCTCTGGGAATGCTTACCTGTTAGAACTGCTTGGCTGTTAGTGTTGGTGGGACTGGCGAGGGCCTaGATCTGGCCCTTGAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: TALWECLPVRTAWLLVLVGLARA*IWPLST Trigger: CGTGCTCAAGGGCCAGATTCAGGCCCTCGCCAGTCC...CACCAACACTAACAGCCAAGCAGTTCTAACAGGTAAGCATTCCCAGAGAGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | TGTGAGACGGGGTTTCTCTGTGTATCCCTAGCTGGCCTGGAACTCCTCCTTCTAGCCAGCTGCTCCAGCTaGAGCTGGAGCTCTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CETGFLCVSLAGLELLLLASCSS*SWSSWK Trigger: TTTCCAAGAGCTCCAGCTCCAGCTGGAGCAGCTGGC...TAGAAGGAGGAGTTCCAGGCCAGCTAGGGATACACAGAGAAACCCCGTCTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | TGTGAGACGGGGTTTCTCTGTGTATCCCTAGCTGGCCTGGAACTCCTCCTTCTATGCTCCAGCTGGAGCTaGAGCTCTTGGAAACGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: CETGFLCVSLAGLELLLLCSSWS*SSWKRD Trigger: GTCTCGTTTCCAAGAGCTCCAGCTCCAGCTGGAGCA...TAGAAGGAGGAGTTCCAGGCCAGCTAGGGATACACAGAGAAACCCCGTCTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR GCA 90 bp | TGTGAGACGGGGTTTCTCTGTGTATCCCTAGCTGGCCTGGAACTCCTCCTTCTAGACTGCTGCATGAGGTaGGGCCTAATGCTACTGATG | + |
|
Preference number: 4 (lower is better) Translates to: CETGFLCVSLAGLELLLLDCCMR*GLMLLM Trigger: CATCAGTAGCATTAGGCCGCACCTCATGCAGCAGTC...TAGAAGGAGGAGTTCCAGGCCAGCTAGGGATACACAGAGAAACCCCGTCTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCTTGGCTGTTAGTGTTGGTGTCCTCCTGTACTTCTGGGAACAGAAGAGGAAGCGCCTCCCCCAGCTaGCAGGGCATGTTTGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: TAWLLVLVSSCTSGNRRGSASPS*QGMFVL Trigger: AAGTACAAACATGCCCTGCCAGCTGGGGGAGGCGCT...TCCTCTTCTGTTCCCAGAAGTACAGGAGGACACCAACACTAACAGCCAAGCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCTTGGCTGTTAGTGTTGGTGTCCTCCTGTACTTCTGGGAACAGAAGAGGAGCCAGCTGCTCCAGCTaGAGCTGGAGCTCTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TAWLLVLVSSCTSGNRRGASCSS*SWSSWK Trigger: TTTCCAAGAGCTCCAGCTCCAGCTGGAGCAGCTGGC...TCCTCTTCTGTTCCCAGAAGTACAGGAGGACACCAACACTAACAGCCAAGCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGCTGCTGGTCATTAAAGGAAGATGGAGAACGGTTGTGGTCTGTTAGTAGCCGCCTCTGCCTCTCCTaGTTCGTCTACATGGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: GGCWSLKEDGERLWSVSSRLCLS*FVYMGL Trigger: AAGTCCCATGTAGACGAAGCAGGAGAGGCAGAGGCG...GCTACTAACAGACCACAACCGTTCTCCATCTTCCTTTAATGACCAGCAGCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR GCA 90 bp | GTAAACGGGACAAGAGGACAAATCTTGGCTTATGATGCGGGCACAGAGCATCTGCGCCTCTGCCTCTCCTaGTTCGTCTACATGGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: VNGTRGQILAYDAGTEHLRLCLS*FVYMGL Trigger: AAGTCCCATGTAGACGAAGCAGGAGAGGCAGAGGCG...CAGATGCTCTGTGCCCGCATCATAAGCCAAGATTTGTCCTCTTGTCCCGTTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR GCA 90 bp | TGTGAGACGGGGTTTCTCTGTGTATCCCTAGCTGGCCTGGAACTCCTCCTTCTATGGAAGGAAGGCAGATaGATGTCCGTTAGCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CETGFLCVSLAGLELLLLWKEGR*MSVSRV Trigger: GACTCTGCTAACGGACATGCATCTGCCTTCCTTCCA...TAGAAGGAGGAGTTCCAGGCCAGCTAGGGATACACAGAGAAACCCCGTCTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCTGAGACAGAGGCAGCCAACTGTTGAAGGCTCTGAGCTCCTACTCAAGGGCTCTTCACTTAACTaGACACTCAAGCAATCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QRLRQRQPTVEGSELLLKGSSLN*TLKQSQ Trigger: CTGGGATTGCTTGAGTGTCCAGTTAAGTGAAGAGCC...CTTGAGTAGGAGCTCAGAGCCTTCAACAGTTGGCTGCCTCTGTCTCAGCCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | GACCATACTGAATACTGCATCTTGCATGCCCAAGTTGGGGCTGCAAGCCAAAAGTGCTCCAGCTGGAGCTaGAGCTCTTGGAAACGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DHTEYCILHAQVGAASQKCSSWS*SSWKRD Trigger: GTCTCGTTTCCAAGAGCTCCAGCTCCAGCTGGAGCA...CTTTTGGCTTGCAGCCCCAACTTGGGCATGCAAGATGCAGTATTCAGTATGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGCTGCTGGTCATTAAAGGAAGATGGAGAACGGTTGTGGTCTGTTAGTAGCAGGGCGTCCTCCAGATaGAAGGAAGGCAGATGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GGCWSLKEDGERLWSVSSRASSR*KEGRCM Trigger: CATGCATCTGCCTTCCTTCCATCTGGAGGACGCCCT...GCTACTAACAGACCACAACCGTTCTCCATCTTCCTTTAATGACCAGCAGCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | GCACTCATACATACGGTCCTCAAAACAGAATCCAGTGCATCCTTCAGTCCCGTGCTTAGCAACGGAGAATaGGGAGGAGCCACACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALIHTVLKTESSASFSPVLSNGE*GGATQG Trigger: TCCCTGTGTGGCTCCTCCCCATTCTCCGTTGCTAAG...CACGGGACTGAAGGATGCACTGGATTCTGTTTTGAGGACCGTATGTATGAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR TCA 90 bp | GGACAAATCTTGGCTTATGATGCGGGCACAGAGCATCTGAGAAAGAATGACTTTCGAGCGGGACTGGAGTaGGGTCTTCCCACTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GQILAYDAGTEHLRKNDFRAGLE*GLPTLW Trigger: CCAAAGAGTGGGAAGACCTCACTCCAGTCCCGCTCG...AAAGTCATTCTTTCTCAGATGCTCTGTGCCCGCATCATAAGCCAAGATTTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGCTGCTGGTCATTAAAGGAAGATGGAGAACGGTTGTGGTCTGTTAGTAGCGACTGCTGCATGAGGTaGGGCCTAATGCTACTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GGCWSLKEDGERLWSVSSDCCMR*GLMLLM Trigger: CATCAGTAGCATTAGGCCGCACCTCATGCAGCAGTC...GCTACTAACAGACCACAACCGTTCTCCATCTTCCTTTAATGACCAGCAGCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCTGAGACAGAGGCAGCCAACTGTTGAAGGCTCTGAGCTCCTACTCAAGCCTGCTTCGTCTACATaGGACTTGTCAAGGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QRLRQRQPTVEGSELLLKPASST*DLSRFS Trigger: TGAAAACCTTGACAAGTCCCATGTAGACGAAGCAGG...CTTGAGTAGGAGCTCAGAGCCTTCAACAGTTGGCTGCCTCTGTCTCAGCCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGGCTGAGACAGAGGCAGCCAACTGTTGAAGGCTCTGAGCTCCTACTCAAGGTTACTACAATTTCATaGGCCAGAGCCATGTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QRLRQRQPTVEGSELLLKVTTIS*ARAMLV Trigger: CACCAACATGGCTCTGGCCCATGAAATTGTAGTAAC...CTTGAGTAGGAGCTCAGAGCCTTCAACAGTTGGCTGCCTCTGTCTCAGCCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | TTATGGCTTCTTAATACAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATCCTAACAGGGGTCAGGAGTaGGGCATCCCCAGAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LWLLNTGVCVCVCVCVHPNRGQE*GIPRAS Trigger: GCTGGCTCTGGGGATGCCCCACTCCTGACCCCTGTT...AGGATGTACACACACACACACACACACACACACACCTGTATTAAGAAGCCATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | ATCCCTAGCTGGCCTGGAACTCCTCCTTCTATTGACCAAACTGGTCTAGAACTCTGGAGCTGGAGCTCTTaGAAACGAGACTGGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: IPSWPGTPPSIDQTGLELWSWSS*KRDWSI Trigger: GATGGACCAGTCTCGTTTCCAAGAGCTCCAGCTCCA...GAGTTCTAGACCAGTTTGGTCAATAGAAGGAGGAGTTCCAGGCCAGCTAGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACCATACTGAATACTGCATCTTGCATGCCCAAGTTGGGGCTGCAAGCCAATGGAGCTGGAGCTCTTaGAAACGAGACTGGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TDHTEYCILHAQVGAASQWSWSS*KRDWSI Trigger: GATGGACCAGTCTCGTTTCCAAGAGCTCCAGCTCCA...TTGGCTTGCAGCCCCAACTTGGGCATGCAAGATGCAGTATTCAGTATGGTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCTCTCTGGGAATGCTTACCTGTTAGAACTGCTTGGCTGTTAGTGTTGGTGGGTCTTCCCACTCTTTaGGAACTAGGTGAGTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: TALWECLPVRTAWLLVLVGLPTL*ELGESD Trigger: GTCGGACTCACCTAGTTCCCAAAGAGTGGGAAGACC...CACCAACACTAACAGCCAAGCAGTTCTAACAGGTAAGCATTCCCAGAGAGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR CAA 72 bp | GTCGGAGAAGCTGCTCCTAGCCAGAGAAGATACCGTTaGGAGAAAGAACCCACACAGATCCCACACAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VGEAAPSQRRYR*EKEPTQIPHKV Trigger: TACTTTGTGTGGGATCTGTGTGGGTTCTTTCTCCAAACGGTATCTTCTCTGGCTAGGAGCAGCTTCTCCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR CAA 72 bp | GCAGGACTTAAGACAGACCATACTGAATACTGCATCTaGCATGCCCAAGTTGGGGCTGCAAGCCAAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGLKTDHTEYCI*HAQVGAASQKL Trigger: GAGCTTTTGGCTTGCAGCCCCAACTTGGGCATGCAAGATGCAGTATTCAGTATGGTCTGTCTTAAGTCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| CDS-3UTR TCA 90 bp | GCACTCATACATACGGTCCTCAAAACAGAATCCAGTGCATCCTTCAGTCCCGTGCCAGAGCCATGTTGGTaGCTCCTTTTGCTGTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: ALIHTVLKTESSASFSPVPEPCW*LLLLFL Trigger: TAGAAACAGCAAAAGGAGTCACCAACATGGCTCTGG...CACGGGACTGAAGGATGCACTGGATTCTGTTTTGAGGACCGTATGTATGAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGCTGCTGGTCATTAAAGGAAGATGGAGAACGGTTGTGGTCTGTTAGTAGCCCAGAGCCATGTTGGTaGCTCCTTTTGCTGTTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GGCWSLKEDGERLWSVSSPEPCW*LLLLFL Trigger: TAGAAACAGCAAAAGGAGTCACCAACATGGCTCTGG...GCTACTAACAGACCACAACCGTTCTCCATCTTCCTTTAATGACCAGCAGCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | GTAAACGGGACAAGAGGACAAATCTTGGCTTATGATGCGGGCACAGAGCATCTGGGCTCTTCACTTAACTaGACACTCAAGCAATCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VNGTRGQILAYDAGTEHLGSSLN*TLKQSQ Trigger: CTGGGATTGCTTGAGTGTCCAGTTAAGTGAAGAGCC...CAGATGCTCTGTGCCCGCATCATAAGCCAAGATTTGTCCTCTTGTCCCGTTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | GTAAACGGGACAAGAGGACAAATCTTGGCTTATGATGCGGGCACAGAGCATCTGTCAAAAGGTCATTTGTaGCCTCTTCCAGCCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VNGTRGQILAYDAGTEHLSKGHL*PLPATV Trigger: CACAGTGGCTGGAAGAGGCCACAAATGACCTTTTGA...CAGATGCTCTGTGCCCGCATCATAAGCCAAGATTTGTCCTCTTGTCCCGTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | GACCATACTGAATACTGCATCTTGCATGCCCAAGTTGGGGCTGCAAGCCAAAAGTCAGGGAAAGGTCTCTaGAAGTGGTCCCATTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DHTEYCILHAQVGAASQKSGKGL*KWSHFR Trigger: TCTGAAATGGGACCACTTCCAGAGACCTTTCCCTGA...CTTTTGGCTTGCAGCCCCAACTTGGGCATGCAAGATGCAGTATTCAGTATGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR CAA 72 bp | TGTAACCCTAGCGTTTGTAAGGCAGAGGCAGGAGGATaGGAAGTCTGGGACAGCCTGTTTTACATAAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CNPSVCKAEAGG*EVWDSLFYISK Trigger: CTTGCTTATGTAAAACAGGCTGTCCCAGACTTCCAATCCTCCTGCCTCTGCCTTACAAACGCTAGGGTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| 3UTR CAA 72 bp | TCAGGAACGGTAGAGAGGGTCTTGCAAAGGCGAGGTTaGACCTCCCAAAGATTCATTGTGCATCCAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: SGTVERVLQRRG*TSQRFIVHPGI Trigger: AATTCCTGGATGCACAATGAATCTTTGGGAGGTCAAACCTCGCCTTTGCAAGACCCTCTCTACCGTTCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCGTGCAGGCTAGGCGATCACTGGCCACTGTACTACATACAAGTTGACAAATTTCTTAGTCTAGTGTaGCCAGGCAGCAAGAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ASCRLGDHWPLYYIQVDKFLSLV*PGSKKD Trigger: ATCTTTCTTGCTGCCTGGTCACACTAGACTAAGAAA...TTTGTCAACTTGTATGTAGTACAGTGGCCAGTGATCGCCTAGCCTGCACGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR TCA 90 bp | GGACAAATCTTGGCTTATGATGCGGGCACAGAGCATCTGAGAAAGAATGACTTTTCTTCCAGCTCTTTCTaGATGGGACCCAATCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GQILAYDAGTEHLRKNDFSSSSF*MGPNPP Trigger: TGGGGGATTGGGTCCCATTCAGAAAGAGCTGGAAGA...AAAGTCATTCTTTCTCAGATGCTCTGTGCCCGCATCATAAGCCAAGATTTGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGCTGCTGGTCATTAAAGGAAGATGGAGAACGGTTGTGGTCTGTTAGTAGCCCTGCTTCGTCTACATaGGACTTGTCAAGGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGCWSLKEDGERLWSVSSPASST*DLSRFS Trigger: TGAAAACCTTGACAAGTCCCATGTAGACGAAGCAGG...GCTACTAACAGACCACAACCGTTCTCCATCTTCCTTTAATGACCAGCAGCCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | GTAAACGGGACAAGAGGACAAATCTTGGCTTATGATGCGGGCACAGAGCATCTGACAAGTTTGATGGCATaGTCATATGTTGGGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VNGTRGQILAYDAGTEHLTSLMA*SYVGGS Trigger: AGAGCCCCCAACATATGACCATGCCATCAAACTTGT...CAGATGCTCTGTGCCCGCATCATAAGCCAAGATTTGTCCTCTTGTCCCGTTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | TTATGGCTTCTTAATACAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATCCTCTTCCAGCCACTGTGTaGCAAAGTCCAGGGAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LWLLNTGVCVCVCVCVHPLPATV*QSPGSS Trigger: CGAACTCCCTGGACTTTGCCACACAGTGGCTGGAAG...AGGATGTACACACACACACACACACACACACACACCTGTATTAAGAAGCCATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | ATGACTTTTGAGAGACAACTGTCTCGGGTTTCTTGGGAGAAGCGGCTCCTCCAAAAAGGTCTCTGGAAGTaGTCCCATTTCAGAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MTFERQLSRVSWEKRLLQKGLWK*SHFRSF Trigger: GAAGCTTCTGAAATGGGACCACTTCCAGAGACCTTT...TTGGAGGAGCCGCTTCTCCCAAGAAACCCGAGACAGTTGTCTCTCAAAAGTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGCTGCTGGTCATTAAAGGAAGATGGAGAACGGTTGTGGTCTGTTAGTAGCAAAGGTCTCTGGAAGTaGTCCCATTTCAGAAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GGCWSLKEDGERLWSVSSKGLWK*SHFRSF Trigger: GAAGCTTCTGAAATGGGACCACTTCCAGAGACCTTT...GCTACTAACAGACCACAACCGTTCTCCATCTTCCTTTAATGACCAGCAGCCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | GCGAGGTTTGACCTCCCAAAGATTCATTGTGCATCCAGGAATTATAGATCAGATAGGGCGTCCTCCAGATaGAAGGAAGGCAGATGCATG | + |
|
Preference number: 4 (lower is better) Translates to: ARFDLPKIHCASRNYRSDRASSR*KEGRCM Trigger: CATGCATCTGCCTTCCTTCCATCTGGAGGACGCCCT...ATCTGATCTATAATTCCTGGATGCACAATGAATCTTTGGGAGGTCAAACCTCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| CDS-3UTR TCA 90 bp | ATCCCTAGCTGGCCTGGAACTCCTCCTTCTATTGACCAAACTGGTCTAGAACTCTCTCTCCTACAAGTTTaGTGGCATGGTCATATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IPSWPGTPPSIDQTGLELSLLQV*WHGHML Trigger: CAACATATGACCATGCCATCAAACTTGTAGGAGAGA...GAGTTCTAGACCAGTTTGGTCAATAGAAGGAGGAGTTCCAGGCCAGCTAGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGCTGCTGGTCATTAAAGGAAGATGGAGAACGGTTGTGGTCTGTTAGTAGCTTTCTTAGTCTAGTGTaGCCAGGCAGCAAGAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GGCWSLKEDGERLWSVSSFLSLV*PGSKKD Trigger: ATCTTTCTTGCTGCCTGGTCACACTAGACTAAGAAA...GCTACTAACAGACCACAACCGTTCTCCATCTTCCTTTAATGACCAGCAGCCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR TCA 90 bp | GGTGGCTGCTGGTCATTAAAGGAAGATGGAGAACGGTTGTGGTCTGTTAGTAGCCAGAAAATATTGCCCTaGAGAGAGGCACTATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGCWSLKEDGERLWSVSSQKILP*REALFP Trigger: AGGAAATAGTGCCTCTCTTCAGGGCAATATTTTCTG...GCTACTAACAGACCACAACCGTTCTCCATCTTCCTTTAATGACCAGCAGCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR TCA 90 bp | GACCATACTGAATACTGCATCTTGCATGCCCAAGTTGGGGCTGCAAGCCAAAAGCAGAAAATATTGCCCTaGAGAGAGGCACTATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DHTEYCILHAQVGAASQKQKILP*REALFP Trigger: AGGAAATAGTGCCTCTCTTCAGGGCAATATTTTCTG...CTTTTGGCTTGCAGCCCCAACTTGGGCATGCAAGATGCAGTATTCAGTATGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGGCTGAGACAGAGGCAGCCAACTGTTGAAGGCTCTGAGCTCCTACTCAAGCAAGCAATCCCAGAATaGTTTATGTACAATCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRLRQRQPTVEGSELLLKQAIPE*FMYNLF Trigger: AAAGAGATTGTACATAAAGCATTCTGGGATTGCTTG...CTTGAGTAGGAGCTCAGAGCCTTCAACAGTTGGCTGCCTCTGTCTCAGCCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR GCA 90 bp | GTAAACGGGACAAGAGGACAAATCTTGGCTTATGATGCGGGCACAGAGCATCTGGAGCTTACTAAGGATTaGATCGTAGTAGGGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VNGTRGQILAYDAGTEHLELTKD*IVVGTE Trigger: TTCTGTCCCTACTACGATGCAATCCTTAGTAAGCTC...CAGATGCTCTGTGCCCGCATCATAAGCCAAGATTTGTCCTCTTGTCCCGTTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR GCA 90 bp | ACTGCTTGGCTGTTAGTGTTGGTGTCCTCCTGTACTTCTGGGAACAGAAGAGGAGAGCTTACTAAGGATTaGATCGTAGTAGGGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TAWLLVLVSSCTSGNRRGELTKD*IVVGTE Trigger: TTCTGTCCCTACTACGATGCAATCCTTAGTAAGCTC...TCCTCTTCTGTTCCCAGAAGTACAGGAGGACACCAACACTAACAGCCAAGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGCTGCTGGTCATTAAAGGAAGATGGAGAACGGTTGTGGTCTGTTAGTAGCTCTTGGAAACGAGACTaGTCCATCAAAACTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGCWSLKEDGERLWSVSSSWKRD*SIKTVS Trigger: TGAGACAGTTTTGATGGACCAGTCTCGTTTCCAAGA...GCTACTAACAGACCACAACCGTTCTCCATCTTCCTTTAATGACCAGCAGCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| 3UTR CAA 72 bp | AAGTGTTACATAGCAACTACTGGAGTTTACGGTCCTTaGCCATCAGGAACGGTAGAGAGGGTCTTGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KCYIATTGVYGP*PSGTVERVLQR Trigger: CCTTTGCAAGACCCTCTCTACCGTTCCTGATGGCAAAGGACCGTAAACTCCAGTAGTTGCTATGTAACACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR CAA 72 bp | CCAAAAGAGATATCCAAGGTGGGAATATTCTTACAGTaGGGAAAGGGCCTTTGGGGTCTGGCAGCAGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: PKEISKVGIFLQ*GKGLWGLAAEM Trigger: CATTTCTGCTGCCAGACCCCAAAGGCCCTTTCCCAACTGTAAGAATATTCCCACCTTGGATATCTCTTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR CAA 72 bp | AATGGCCAGTCCATTAACTTTGAGAAATACAGTACTTaGCACTGGGAAGCAGAGCGAGCAGTTTCTAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NGQSINFEKYST*HWEAERAVSRG Trigger: GCCCCTAGAAACTGCTCGCTCTGCTTCCCAGTGCAAAGTACTGTATTTCTCAAAGTTAATGGACTGGCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| CDS-3UTR TCA 90 bp | TTATGGCTTCTTAATACAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATCCTCTCTCCAGCACTTCCTaGAACTTCCTCCTCTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: LWLLNTGVCVCVCVCVHPLSSTS*NFLLSY Trigger: GTATGAGAGGAGGAAGTTTCAGGAAGTGCTGGAGAG...AGGATGTACACACACACACACACACACACACACACCTGTATTAAGAAGCCATAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR TCA 90 bp | ATCCCTAGCTGGCCTGGAACTCCTCCTTCTATTGACCAAACTGGTCTAGAACTCGCATGTTTGTACTTCTaGCTCAAAAGGTCATTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IPSWPGTPPSIDQTGLELACLYF*LKRSFV Trigger: CACAAATGACCTTTTGAGTCAGAAGTACAAACATGC...GAGTTCTAGACCAGTTTGGTCAATAGAAGGAGGAGTTCCAGGCCAGCTAGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR GCA 90 bp | GACCATACTGAATACTGCATCTTGCATGCCCAAGTTGGGGCTGCAAGCCAAAAGCAACACAGAAAATATTaGCCTGAAGAGAGGCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: DHTEYCILHAQVGAASQKQHRKY*PEERHY Trigger: ATAGTGCCTCTCTTCAGGGCAATATTTTCTGTGTTG...CTTTTGGCTTGCAGCCCCAACTTGGGCATGCAAGATGCAGTATTCAGTATGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | GGACAAATCTTGGCTTATGATGCGGGCACAGAGCATCTGAGAAAGAATGACTTTTCAGGGAAAGGTCTCTaGAAGTGGTCCCATTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GQILAYDAGTEHLRKNDFSGKGL*KWSHFR Trigger: TCTGAAATGGGACCACTTCCAGAGACCTTTCCCTGA...AAAGTCATTCTTTCTCAGATGCTCTGTGCCCGCATCATAAGCCAAGATTTGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| 3UTR CAA 72 bp | GGTGGCTGCTGGTCATTAAAGGAAGATGGAGAACGGTaGTGGTCTGTTAGTAGCCACAGTCAAAAGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: GGCWSLKEDGER*WSVSSHSQKKT Trigger: TGTTTTCTTTTGACTGTGGCTACTAACAGACCACAACCGTTCTCCATCTTCCTTTAATGACCAGCAGCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | ATACACTCTAAGGATGTAGTAAAATCAGAATGGAAGGAAGTCAGTGAAGGGTTTCTTCCAGCCACTGTGTaGCAAAGTCCAGGGAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: IHSKDVVKSEWKEVSEGFLPATV*QSPGSS Trigger: CGAACTCCCTGGACTTTGCCACACAGTGGCTGGAAG...AAACCCTTCACTGACTTCCTTCCATTCTGATTTTACTACATCCTTAGAGTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| CDS-3UTR GCA 90 bp | GACCATACTGAATACTGCATCTTGCATGCCCAAGTTGGGGCTGCAAGCCAAAAGCAAGCAATCCCAGAATaGTTTATGTACAATCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DHTEYCILHAQVGAASQKQAIPE*FMYNLF Trigger: AAAGAGATTGTACATAAAGCATTCTGGGATTGCTTG...CTTTTGGCTTGCAGCCCCAACTTGGGCATGCAAGATGCAGTATTCAGTATGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | TTATGGCTTCTTAATACAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATCCTACAAGTTTGATGGCATaGTCATATGTTGGGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LWLLNTGVCVCVCVCVHPTSLMA*SYVGGS Trigger: AGAGCCCCCAACATATGACCATGCCATCAAACTTGT...AGGATGTACACACACACACACACACACACACACACCTGTATTAAGAAGCCATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCTTCAACTGTGGTAAATACGGTCATTTGCAGAGACTGTGACCAAACCAAACCATCTTGTTATAGTTaGCCAGGCGCACAAATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CASTVVNTVICRDCDQTKPSCYS*PGAQIS Trigger: TGAAATTTGTGCGCCTGGTCAACTATAACAAGATGG...TTTGGTTTGGTCACAGTCTCTGCAAATGACCGTATTTACCACAGTTGAAGCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| CDS-3UTR GCA 90 bp | GGACAAATCTTGGCTTATGATGCGGGCACAGAGCATCTGAGAAAGAATGACTTTCAACACAGAAAATATTaGCCTGAAGAGAGGCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: GQILAYDAGTEHLRKNDFQHRKY*PEERHY Trigger: ATAGTGCCTCTCTTCAGGGCAATATTTTCTGTGTTG...AAAGTCATTCTTTCTCAGATGCTCTGTGCCCGCATCATAAGCCAAGATTTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | TTATGGCTTCTTAATACAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATCCTTCTTGGAAACGAGACTaGTCCATCAAAACTGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LWLLNTGVCVCVCVCVHPSWKRD*SIKTVS Trigger: TGAGACAGTTTTGATGGACCAGTCTCGTTTCCAAGA...AGGATGTACACACACACACACACACACACACACACCTGTATTAAGAAGCCATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR TCA 90 bp | GCGAGGTTTGACCTCCCAAAGATTCATTGTGCATCCAGGAATTATAGATCAGATGCATGTTTGTACTTCTaGCTCAAAAGGTCATTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ARFDLPKIHCASRNYRSDACLYF*LKRSFV Trigger: CACAAATGACCTTTTGAGTCAGAAGTACAAACATGC...ATCTGATCTATAATTCCTGGATGCACAATGAATCTTTGGGAGGTCAAACCTCGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| CDS-3UTR GCA 90 bp | TCTATAACCGTGGTGTTTGGAATTCTGGGAACTTTTCAGAAGGTATATAAACACCTCATCTCGAGCAGGTaGACACAATATCCCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SITVVFGILGTFQKVYKHLISSR*TQYPHH Trigger: ATGATGGGGATATTGTGTGCACCTGCTCGAGATGAG...GTGTTTATATACCTTCTGAAAAGTTCCCAGAATTCCAAACACCACGGTTATAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CCA 90 bp | TCAGTGAAGGGTTTGCATTGGAGACACAAATTTGTTTATATTTCCACAGGAAATTCAAAAGGTCATTTGTaGCCTCTTCCAGCCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVKGLHWRHKFVYISTGNSKGHL*PLPATV Trigger: CACAGTGGCTGGAAGAGGCCACAAATGACCTTTTGA...ATTTCCTGTGGAAATATAAACAAATTTGTGTCTCCAATGCAAACCCTTCACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| 3UTR CAA 72 bp | CATCAAAGACTATTCCAGTACAATGAACAGGAGGGTTaGGAAGTCCTGGAAAATATATGTTCTGGCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: HQRLFQYNEQEG*EVLENICSGKQ Trigger: CTGTTTGCCAGAACATATATTTTCCAGGACTTCCAAACCCTCCTGTTCATTGTACTGGAATAGTCTTTGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR TCA 90 bp | TCTATAACCGTGGTGTTTGGAATTCTGGGAACTTTTCAGAAGGTATATAAACACCCATCTTGTTATAGTTaGCCAGGCGCACAAATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SITVVFGILGTFQKVYKHPSCYS*PGAQIS Trigger: TGAAATTTGTGCGCCTGGTCAACTATAACAAGATGG...GTGTTTATATACCTTCTGAAAAGTTCCCAGAATTCCAAACACCACGGTTATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCCGGCACAGCACTGCGAGGGCGAGCGAGCGGGGTCTCAGGAGATGAGAGCTGGGCCAGAGCCATGTaGGTGACTCCTTTTGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KPGTALRGRASGVSGDESWARAM*VTPFAV Trigger: AACAGCAAAAGGAGTCACCAACATGGCTCTGGCCCA...GCTCTCATCTCCTGAGACCCCGCTCGCTCGCCCTCGCAGTGCTGTGCCGGGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS TCA 90 bp | GACTCCATGATCCTGCGAATGGGGTCCTCGGGACTGGCGAGGGCCTaGATCTGGCCCTTGAGCACGGTCTCCTTAGCAACGGAGAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: DSMILRMGSSGLARA*IWPLSTVSLATENG Trigger: CCCATTCTCCGTTGCTAAGGAGACCGTGCTCAAGGGCCAGATTCAGGCCCTCGCCAGTCCCGAGGACCCCATTCGCAGGATCATGGAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS GCA 90 bp | CATCTTGAGCTTCTCGGCAAAGTCGGCATGCCCAGAAATTCCCGGTaGAGCGGTACTGAACGTGACCAGCAGCACGGCTCCCAGGACGGC | + |
|
Preference number: 5 (lower is better) Translates to: HLELLGKVGMPRNSR*SGTERDQQHGSQDG Trigger: GCCGTCCTGGGAGCCGTGCTGCTGGTCACGTTCAGTACCGCTGCACCGGGAATTTCTGGGCATGCCGACTTTGCCGAGAAGCTCAAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS GCA 90 bp | GCACTCCAGAGCACCTTCCAGGCCTTGCTCGGAGGCAGCCGCCTCTaGCTCTCCTGCTTCGTCTACATGGGACTTGTCAAGGTTTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALQSTFQALLGGSRL*LSCFVYMGLVKVFR Trigger: TCTGAAAACCTTGACAAGTCCCATGTAGACGAAGCAGGAGAGGCAGAGGCGGCTGCCTCCGAGCAAGGCCTGGAAGGTGCTCTGGAGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS CCA 90 bp | TCCAGGCACACCTTCTCGCCAATGGAAGCCAGGGCGTCCTCCAGATaGAAGGAAGGCAGATGCATGTCCGTTAGCAGAGTCTTCACCATC | + |
|
Preference number: 5 (lower is better) Translates to: SRHTFSPMEARASSR*KEGRCMSVSRVFTI Trigger: GATGGTGAAGACTCTGCTAACGGACATGCATCTGCCTTCCTTCCATCTGGAGGACGCCCTGGCTTCCATTGGCGAGAAGGTGTGCCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS TCA 90 bp | TGTGTGGCAAAGTCCAGGGAGTTCGGCTGCCTCTCCAGCACTTCCTaGAACTTCCTCCTCTCATACTCGACTGACTGCTGCATGAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CVAKSREFGCLSSTS*NFLLSYSTDCCMRC Trigger: GCACCTCATGCAGCAGTCAGTCGAGTATGAGAGGAGGAAGTTTCAGGAAGTGCTGGAGAGGCAGCCGAACTCCCTGGACTTTGCCACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS GCA 90 bp | AGCAGAGTCTTCACCATCATCTTGAGCTTCTCGGCAAAGTCGGCATaGCCAGAAATTCCCGGTGCAGCGGTACTGAACGTGACCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRVFTIILSFSAKSA*PEIPGAAVLNVTSS Trigger: GCTGCTGGTCACGTTCAGTACCGCTGCACCGGGAATTTCTGGGCATGCCGACTTTGCCGAGAAGCTCAAGATGATGGTGAAGACTCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS GCA 90 bp | TCGCCAATGGAAGCCAGGGCGTCCTCCAGATGGAAGGAAGGCAGATaGATGTCCGTTAGCAGAGTCTTCACCATCATCTTGAGCTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SPMEARASSRWKEGR*MSVSRVFTIILSFS Trigger: CGAGAAGCTCAAGATGATGGTGAAGACTCTGCTAACGGACATGCATCTGCCTTCCTTCCATCTGGAGGACGCCCTGGCTTCCATTGGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS TCA 90 bp | AGGAAGGCAGATGCATGTCCGTTAGCAGAGTCTTCACCATCATCTTaGGCTTCTCGGCAAAGTCGGCATGCCCAGAAATTCCCGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RKADACPLAESSPSS*ASRQSRHAQKFPVQ Trigger: CTGCACCGGGAATTTCTGGGCATGCCGACTTTGCCGAGAAGCTCAAGATGATGGTGAAGACTCTGCTAACGGACATGCATCTGCCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS CCA 90 bp | ACTTCTGACTCAAAAGGTCATTTGTGGCCTCTTCCAGCCACTGTGTaGCAAAGTCCAGGGAGTTCGGCTGCCTCTCCAGCACTTCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TSDSKGHLWPLPATV*QSPGSSAASPALPE Trigger: TTCAGGAAGTGCTGGAGAGGCAGCCGAACTCCCTGGACTTTGCCACACAGTGGCTGGAAGAGGCCACAAATGACCTTTTGAGTCAGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS CCA 90 bp | CAGCTGGCAGGGCATGTTTGTACTTCTGACTCAAAAGGTCATTTGTaGCCTCTTCCAGCCACTGTGTGGCAAAGTCCAGGGAGTTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QLAGHVCTSDSKGHL*PLPATVWQSPGSSA Trigger: AGCCGAACTCCCTGGACTTTGCCACACAGTGGCTGGAAGAGGCCACAAATGACCTTTTGAGTCAGAAGTACAAACATGCCCTGCCAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS TCA 90 bp | GTTTCTAGAAGTTCCTCTACAGTGACAAGCCGAGCGGGACTGGAGTaGGGTCTTCCCACTCTTTGGGAACTAGGTGAGTCCGACTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: VSRSSSTVTSRAGLE*GLPTLWELGESDFT Trigger: AGTGAAGTCGGACTCACCTAGTTCCCAAAGAGTGGGAAGACCTCACTCCAGTCCCGCTCGGCTTGTCACTGTAGAGGAACTTCTAGAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CAA 90 bp | ACAGACCATACTGAATACTGCATCTTGCATGCCCAAGTTGGGGCTGCAAGCCAACTGGAGCTGGAGCTCTaGGAAACGAGACTGGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TDHTEYCILHAQVGAASQLELEL*ETRLVH Trigger: ATGGACCAGTCTCGTTTCCAAGAGCTCCAGCTCCAG...TTGGCTTGCAGCCCCAACTTGGGCATGCAAGATGCAGTATTCAGTATGGTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| CDS-3UTR CAA 90 bp | GCACTCATACATACGGTCCTCAAAACAGAATCCAGTGCATCCTTCAGTCCCGTGATGAACTCTGCCAGCTaGGAAATGTCTAGGGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALIHTVLKTESSASFSPVMNSAS*EMSRAP Trigger: TGGGGCCCTAGACATTTCCAAGCTGGCAGAGTTCAT...CACGGGACTGAAGGATGCACTGGATTCTGTTTTGAGGACCGTATGTATGAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CAA 90 bp | GACCATACTGAATACTGCATCTTGCATGCCCAAGTTGGGGCTGCAAGCCAAAAGATGAACTCTGCCAGCTaGGAAATGTCTAGGGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: DHTEYCILHAQVGAASQKMNSAS*EMSRAP Trigger: TGGGGCCCTAGACATTTCCAAGCTGGCAGAGTTCAT...CTTTTGGCTTGCAGCCCCAACTTGGGCATGCAAGATGCAGTATTCAGTATGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| CDS-3UTR CAA 90 bp | ACTGCTCTCTGGGAATGCTTACCTGTTAGAACTGCTTGGCTGTTAGTGTTGGTGTGGGCCAGAGCCATGTaGGTGACTCCTTTTGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TALWECLPVRTAWLLVLVWARAM*VTPFAV Trigger: AACAGCAAAAGGAGTCACCAACATGGCTCTGGCCCA...CACCAACACTAACAGCCAAGCAGTTCTAACAGGTAAGCATTCCCAGAGAGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111118.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCGTGCAGGCTAGGCGATCACTGGCCACTGTACTACATACAAGTTGACAAATGGCATGGTCATATGTaGGGGGCTCTTCACTTAACT | + |
|
Preference number: 5 (lower is better) Translates to: ASCRLGDHWPLYYIQVDKWHGHM*GALHLT Trigger: AGTTAAGTGAAGAGCCCCCAACATATGACCATGCCA...TTTGTCAACTTGTATGTAGTACAGTGGCCAGTGATCGCCTAGCCTGCACGAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CAA 90 bp | GCACTCATACATACGGTCCTCAAAACAGAATCCAGTGCATCCTTCAGTCCCGTGTGGCATGGTCATATGTaGGGGGCTCTTCACTTAACT | + |
|
Preference number: 5 (lower is better) Translates to: ALIHTVLKTESSASFSPVWHGHM*GALHLT Trigger: AGTTAAGTGAAGAGCCCCCAACATATGACCATGCCA...CACGGGACTGAAGGATGCACTGGATTCTGTTTTGAGGACCGTATGTATGAGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CAA 90 bp | TGTGAGACGGGGTTTCTCTGTGTATCCCTAGCTGGCCTGGAACTCCTCCTTCTAATCTCTCCTACAAGTTaGATGGCATGGTCATATGTT | + |
|
Preference number: 5 (lower is better) Translates to: CETGFLCVSLAGLELLLLISPTS*MAWSYV Trigger: AACATATGACCATGCCATCAAACTTGTAGGAGAGAT...TAGAAGGAGGAGTTCCAGGCCAGCTAGGGATACACAGAGAAACCCCGTCTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGCTGCTGGTCATTAAAGGAAGATGGAGAACGGTTGTGGTCTGTTAGTAGCGATAACAGAGTCTCTTaGATCTCTCCTACAAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGCWSLKEDGERLWSVSSDNRVS*ISPTSL Trigger: CAAACTTGTAGGAGAGATCAAAGAGACTCTGTTATC...GCTACTAACAGACCACAACCGTTCTCCATCTTCCTTTAATGACCAGCAGCCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CAA 90 bp | TCTATAACCGTGGTGTTTGGAATTCTGGGAACTTTTCAGAAGGTATATAAACACCTGGAGCTGGAGCTCTaGGAAACGAGACTGGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SITVVFGILGTFQKVYKHLELEL*ETRLVH Trigger: ATGGACCAGTCTCGTTTCCAAGAGCTCCAGCTCCAG...GTGTTTATATACCTTCTGAAAAGTTCCCAGAATTCCAAACACCACGGTTATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS CCA 90 bp | AATTCAACAGCGTTAATCCGGAAGTCTCCAGTTACTACAATTTCATaGGCCAGAGCCATGTTGGTGACTCCTTTTGCTGTTTCTAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: NSTALIRKSPVTTIS*ARAMLVTPFAVSRS Trigger: ACTTCTAGAAACAGCAAAAGGAGTCACCAACATGGCTCTGGCCCATGAAATTGTAGTAACTGGAGACTTCCGGATTAACGCTGTTGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS CCA 90 bp | AAAGATAACAGAGTCTCTTTGATCTCTCCTACAAGTTTGATGGCATaGTCATATGTTGGGGGCTCTTCACTTAACTGGACACTCAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: KDNRVSLISPTSLMA*SYVGGSSLNWTLKQ Trigger: TTGCTTGAGTGTCCAGTTAAGTGAAGAGCCCCCAACATATGACCATGCCATCAAACTTGTAGGAGAGATCAAAGAGACTCTGTTATCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS CCA 90 bp | ACAAGTTTGATGGCATGGTCATATGTTGGGGGCTCTTCACTTAACTaGACACTCAAGCAATCCCAGAATGCTTTATGTACAATCTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TSLMAWSYVGGSSLN*TLKQSQNALCTISF Trigger: AAAAGAGATTGTACATAAAGCATTCTGGGATTGCTTGAGTGTCCAGTTAAGTGAAGAGCCCCCAACATATGACCATGCCATCAAACTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS-3UTR CAA 90 bp | TTATGGCTTCTTAATACAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATCCTGATAACAGAGTCTCTTaGATCTCTCCTACAAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LWLLNTGVCVCVCVCVHPDNRVS*ISPTSL Trigger: CAAACTTGTAGGAGAGATCAAAGAGACTCTGTTATC...AGGATGTACACACACACACACACACACACACACACCTGTATTAAGAAGCCATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS CCA 72 bp | AGCAGCACGGCTCCCAGGACGGCCAGCTGCTCCAGCTaGAGCTGGAGCTCTTGGAAACGAGACTGGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: SSTAPRTASCSS*SWSSWKRDWSI Trigger: GATGGACCAGTCTCGTTTCCAAGAGCTCCAGCTCCAGCTGGAGCAGCTGGCCGTCCTGGGAGCCGTGCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS GCA 72 bp | AGCACCTTCCAGGCCTTGCTCGGAGGCAGCCGCCTCTaGCTCTCCTGCTTCGTCTACATGGGACTTGTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: STFQALLGGSRL*LSCFVYMGLVK Trigger: CTTGACAAGTCCCATGTAGACGAAGCAGGAGAGGCAGAGGCGGCTGCCTCCGAGCAAGGCCTGGAAGGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS GCA 72 bp | CTTCTCGGCAAAGTCGGCATGCCCAGAAATTCCCGGTaGAGCGGTACTGAACGTGACCAGCAGCACGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLGKVGMPRNSR*SGTERDQQHGS Trigger: GGAGCCGTGCTGCTGGTCACGTTCAGTACCGCTGCACCGGGAATTTCTGGGCATGCCGACTTTGCCGAGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS GCA 72 bp | CAGGCCTTGCTCGGAGGCAGCCGCCTCTGCCTCTCCTaGTTCGTCTACATGGGACTTGTCAAGGTTTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: QALLGGSRLCLS*FVYMGLVKVFR Trigger: TCTGAAAACCTTGACAAGTCCCATGTAGACGAAGCAGGAGAGGCAGAGGCGGCTGCCTCCGAGCAAGGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
||
| CDS CCA 72 bp | ACCTTCTCGCCAATGGAAGCCAGGGCGTCCTCCAGATaGAAGGAAGGCAGATGCATGTCCGTTAGCAGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: TFSPMEARASSR*KEGRCMSVSRV Trigger: GACTCTGCTAACGGACATGCATCTGCCTTCCTTCCATCTGGAGGACGCCCTGGCTTCCATTGGCGAGAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS TCA 72 bp | AGTTCCTCTACAGTGACAAGCCGAGCGGGACTGGAGTaGGGTCTTCCCACTCTTTGGGAACTAGGTGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: SSSTVTSRAGLE*GLPTLWELGES Trigger: GGACTCACCTAGTTCCCAAAGAGTGGGAAGACCTCACTCCAGTCCCGCTCGGCTTGTCACTGTAGAGGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS TCA 72 bp | AAGTCCAGGGAGTTCGGCTGCCTCTCCAGCACTTCCTaGAACTTCCTCCTCTCATACTCGACTGACTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: KSREFGCLSSTS*NFLLSYSTDCC Trigger: GCAGCAGTCAGTCGAGTATGAGAGGAGGAAGTTTCAGGAAGTGCTGGAGAGGCAGCCGAACTCCCTGGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS CCA 72 bp | TCAAAAGGTCATTTGTGGCCTCTTCCAGCCACTGTGTaGCAAAGTCCAGGGAGTTCGGCTGCCTCTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SKGHLWPLPATV*QSPGSSAASPA Trigger: TGCTGGAGAGGCAGCCGAACTCCCTGGACTTTGCCACACAGTGGCTGGAAGAGGCCACAAATGACCTTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS CAA 90 bp | CCCCAGCTGGCAGGGCATGTTTGTACTTCTGACTCAAAAGGTCATTaGTGGCCTCTTCCAGCCACTGTGTGGCAAAGTCCAGGGAGTTCG | + |
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Preference number: 6 (lower is better) Translates to: PQLAGHVCTSDSKGH*WPLPATVWQSPGSS Trigger: CGAACTCCCTGGACTTTGCCACACAGTGGCTGGAAGAGGCCACAAATGACCTTTTGAGTCAGAAGTACAAACATGCCCTGCCAGCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS GCA 72 bp | TTCCTCCTCTCATACTCGACTGACTGCTGCATGAGGTaGGGCCTAATGCTACTGATGGCGAAGTTGGCCATG | + |
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Preference number: 6 (lower is better) Translates to: FLLSYSTDCCMR*GLMLLMAKLAM Trigger: CATGGCCAACTTCGCCATCAGTAGCATTAGGCCGCACCTCATGCAGCAGTCAGTCGAGTATGAGAGGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS GCA 72 bp | TTCACCATCATCTTGAGCTTCTCGGCAAAGTCGGCATaGCCAGAAATTCCCGGTGCAGCGGTACTGAACGTG | + |
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Preference number: 6 (lower is better) Translates to: FTIILSFSAKSA*PEIPGAAVLNV Trigger: CACGTTCAGTACCGCTGCACCGGGAATTTCTGGGCATGCCGACTTTGCCGAGAAGCTCAAGATGATGGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS GCA 72 bp | GAAGCCAGGGCGTCCTCCAGATGGAAGGAAGGCAGATaGATGTCCGTTAGCAGAGTCTTCACCATCATCTTG | + |
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Preference number: 6 (lower is better) Translates to: EARASSRWKEGR*MSVSRVFTIIL Trigger: CAAGATGATGGTGAAGACTCTGCTAACGGACATGCATCTGCCTTCCTTCCATCTGGAGGACGCCCTGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS CCA 72 bp | TGCTCCAGCTGGAGCTGGAGCTCTTGGAAACGAGACTaGTCCATCAAAACTGTCTCAGGGAAAGGTCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: CSSWSWSSWKRD*SIKTVSGKGLW Trigger: CCAGAGACCTTTCCCTGAGACAGTTTTGATGGACCAGTCTCGTTTCCAAGAGCTCCAGCTCCAGCTGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS TCA 72 bp | CGCACAAATTTCACAGCAACTTCTTCCAGCTCTTTCTaGATGGGACCCAATCCCCCAGGCACAGTAGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: RTNFTATSSSSF*MGPNPPGTVGR Trigger: CCTGCCTACTGTGCCTGGGGGATTGGGTCCCATTCAGAAAGAGCTGGAAGAAGTTGCTGTGAAATTTGTGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS CAA 90 bp | AAGGAAGGCAGATGCATGTCCGTTAGCAGAGTCTTCACCATCATCTaGAGCTTCTCGGCAAAGTCGGCATGCCCAGAAATTCCCGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: KEGRCMSVSRVFTII*SFSAKSACPEIPGA Trigger: TGCACCGGGAATTTCTGGGCATGCCGACTTTGCCGAGAAGCTCAAGATGATGGTGAAGACTCTGCTAACGGACATGCATCTGCCTTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS CCA 72 bp | GGGCATGTTTGTACTTCTGACTCAAAAGGTCATTTGTaGCCTCTTCCAGCCACTGTGTGGCAAAGTCCAGGG | + |
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Preference number: 6 (lower is better) Translates to: GHVCTSDSKGHL*PLPATVWQSPG Trigger: CCCTGGACTTTGCCACACAGTGGCTGGAAGAGGCCACAAATGACCTTTTGAGTCAGAAGTACAAACATGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS TCA 72 bp | GATGCATGTCCGTTAGCAGAGTCTTCACCATCATCTTaGGCTTCTCGGCAAAGTCGGCATGCCCAGAAATTC | + |
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Preference number: 6 (lower is better) Translates to: DACPLAESSPSS*ASRQSRHAQKF Trigger: GAATTTCTGGGCATGCCGACTTTGCCGAGAAGCTCAAGATGATGGTGAAGACTCTGCTAACGGACATGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS CAA 72 bp | GCAGGGCATGTTTGTACTTCTGACTCAAAAGGTCATTaGTGGCCTCTTCCAGCCACTGTGTGGCAAAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: AGHVCTSDSKGH*WPLPATVWQSP Trigger: TGGACTTTGCCACACAGTGGCTGGAAGAGGCCACAAATGACCTTTTGAGTCAGAAGTACAAACATGCCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS CAA 72 bp | TGCATGAGGTGCGGCCTAATGCTACTGATGGCGAAGTaGGCCATGTCAACTTTCATTAGGTCCAACACAGAA | + |
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Preference number: 6 (lower is better) Translates to: CMRCGLMLLMAK*AMSTFIRSNTE Trigger: TTCTGTGTTGGACCTAATGAAAGTTGACATGGCCAACTTCGCCATCAGTAGCATTAGGCCGCACCTCATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS CAA 72 bp | AGATGCATGTCCGTTAGCAGAGTCTTCACCATCATCTaGAGCTTCTCGGCAAAGTCGGCATGCCCAGAAATT | + |
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Preference number: 6 (lower is better) Translates to: RCMSVSRVFTII*SFSAKSACPEI Trigger: AATTTCTGGGCATGCCGACTTTGCCGAGAAGCTCAAGATGATGGTGAAGACTCTGCTAACGGACATGCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS CAA 90 bp | ACTGACTGCTGCATGAGGTGCGGCCTAATGCTACTGATGGCGAAGTaGGCCATGTCAACTTTCATTAGGTCCAACACAGAAAATATTGCC | + |
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Preference number: 6 (lower is better) Translates to: TDCCMRCGLMLLMAK*AMSTFIRSNTENIA Trigger: GGCAATATTTTCTGTGTTGGACCTAATGAAAGTTGACATGGCCAACTTCGCCATCAGTAGCATTAGGCCGCACCTCATGCAGCAGTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS CCA 72 bp | GCGTTAATCCGGAAGTCTCCAGTTACTACAATTTCATaGGCCAGAGCCATGTTGGTGACTCCTTTTGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: ALIRKSPVTTIS*ARAMLVTPFAV Trigger: AACAGCAAAAGGAGTCACCAACATGGCTCTGGCCCATGAAATTGTAGTAACTGGAGACTTCCGGATTAACGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS CAA 90 bp | ATCCGGAAGTCTCCAGTTACTACAATTTCATGGGCCAGAGCCATGTaGGTGACTCCTTTTGCTGTTTCTAGAAGTTCCTCTACAGTGACA | + |
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Preference number: 6 (lower is better) Translates to: IRKSPVTTISWARAM*VTPFAVSRSSSTVT Trigger: TGTCACTGTAGAGGAACTTCTAGAAACAGCAAAAGGAGTCACCAACATGGCTCTGGCCCATGAAATTGTAGTAACTGGAGACTTCCGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS CAA 72 bp | AATATCCCCATCATGCCAATAATGAACTCTGCCAGCTaGGAAATGTCTAGGGCCCCATTCTCTGCTTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: NIPIMPIMNSAS*EMSRAPFSASC Trigger: ACAAGAAGCAGAGAATGGGGCCCTAGACATTTCCAAGCTGGCAGAGTTCATTATTGGCATGATGGGGATATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS TCA 72 bp | CAGTTACTACAATTTCATGGGCCAGAGCCATGTTGGTaGCTCCTTTTGCTGTTTCTAGAAGTTCCTCTACAG | + |
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Preference number: 6 (lower is better) Translates to: QLLQFHGPEPCW*LLLLFLEVPLQ Trigger: CTGTAGAGGAACTTCTAGAAACAGCAAAAGGAGTCACCAACATGGCTCTGGCCCATGAAATTGTAGTAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS TCA 72 bp | CATCGTAGTAGGGACAGAACACCATCTTGTTATAGTTaGCCAGGCGCACAAATTTCACAGCAACTTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: HRSRDRTPSCYS*PGAQISQQLLP Trigger: TGGAAGAAGTTGCTGTGAAATTTGTGCGCCTGGTCAACTATAACAAGATGGTGTTCTGTCCCTACTACGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS CCA 72 bp | AGAGTCTCTTTGATCTCTCCTACAAGTTTGATGGCATaGTCATATGTTGGGGGCTCTTCACTTAACTGGACA | + |
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Preference number: 6 (lower is better) Translates to: RVSLISPTSLMA*SYVGGSSLNWT Trigger: TGTCCAGTTAAGTGAAGAGCCCCCAACATATGACCATGCCATCAAACTTGTAGGAGAGATCAAAGAGACTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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| CDS CAA 72 bp | AAAGATAACAGAGTCTCTTTGATCTCTCCTACAAGTTaGATGGCATGGTCATATGTTGGGGGCTCTTCACTT | + |
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Preference number: 6 (lower is better) Translates to: KDNRVSLISPTS*MAWSYVGGSSL Trigger: AAGTGAAGAGCCCCCAACATATGACCATGCCATCAAACTTGTAGGAGAGATCAAAGAGACTCTGTTATCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028597.4 ENSMUST00000111118.8 |
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