Pregenerated sensors for TCP11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062859Ensembl transcript IDs: ENSMUST00000042692.13, ENSMUST00000043925.16, ENSMUST00000114836.9, ENSMUST00000129046.9, ENSMUST00000232728.2, ENSMUST00000232798.2, ENSMUST00000233009.2, ENSMUST00000233615.2, ENSMUST00000233665.2, ENSMUST00000233898.2
Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | ACGGCGACATCACTGGGAGATGGGCCGGCCGAGCTGGAGCAGTCCTaGAAGTCAGAGGAACTGGCAGAGGGGGCAATGAGCTGTGTGGCC | + |
Preference number: 1 (lower is better) Translates to: TATSLGDGPAELEQS*KSEELAEGAMSCVA Trigger: GGCCACACAGCTCATTGCCCCCTCTGCCAGTTCCTCTGACTTGCAGGACTGCTCCAGCTCGGCCGGCCCATCTCCCAGTGATGTCGCCGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR GCA 90 bp | GCAGAGGGGACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATaGGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGT | + |
Preference number: 1 (lower is better) Translates to: AEGTLLLSGDVIPGR*AFSWVQGASAPSRC Trigger: ACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGTCCCCTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232728.2 ENSMUST00000232798.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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3UTR TCA 90 bp | GAGAAGCTACTGGCCACCAGCAAGACAGAGGCAAGGATGGTTAGCTaGCTCTGCTGCGACTCCAGCTCCTGCAGCCGGGGTCTGTCTGCC | + |
Preference number: 1 (lower is better) Translates to: EKLLATSKTEARMVS*LCCDSSSCSRGLSA Trigger: GGCAGACAGACCCCGGCTGCAGGAGCTGGAGTCGCAGCAGAGTCAGCTAACCATCCTTGCCTCTGTCTTGCTGGTGGCCAGTAGCTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR GCA 90 bp | TGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTaGTCCGAGCCGATGTCATCAGAGAGACCCACCTTTGGTGGCCAG | + |
Preference number: 1 (lower is better) Translates to: CHPREMRFLLGPRCQ*SEPMSSERPTFGGQ Trigger: CTGGCCACCAAAGGTGGGTCTCTCTGATGACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR CCA 90 bp | CACTGTCAGAGAAGCTACTGGCCACCAGCAAGACAGAGGCAAGGATaGTTAGCTGACTCTGCTGCGACTCCAGCTCCTGCAGCCGGGGTC | + |
Preference number: 1 (lower is better) Translates to: HCQRSYWPPARQRQG*LADSAATPAPAAGV Trigger: GACCCCGGCTGCAGGAGCTGGAGTCGCAGCAGAGTCAGCTAACCATCCTTGCCTCTGTCTTGCTGGTGGCCAGTAGCTTCTCTGACAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR CCA 90 bp | TTCTCGCTGCTCAGAGCGGCCAACCCCATGCTCTCGAGACCCTGGTaGACTTCCTCCACCACCTGCTCACTCACTGACTGCATCACTTCC | + |
Preference number: 1 (lower is better) Translates to: FSLLRAANPMLSRPW*TSSTTCSLTDCITS Trigger: GGAAGTGATGCAGTCAGTGAGTGAGCAGGTGGTGGAGGAAGTCCACCAGGGTCTCGAGAGCATGGGGTTGGCCGCTCTGAGCAGCGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR CCA 90 bp | GTATTCTCGCTGCTCAGAGCGGCCAACCCCATGCTCTCGAGACCCTaGTGGACTTCCTCCACCACCTGCTCACTCACTGACTGCATCACT | + |
Preference number: 1 (lower is better) Translates to: VFSLLRAANPMLSRP*WTSSTTCSLTDCIT Trigger: AGTGATGCAGTCAGTGAGTGAGCAGGTGGTGGAGGAAGTCCACCAGGGTCTCGAGAGCATGGGGTTGGCCGCTCTGAGCAGCGAGAATAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR CCA 90 bp | TGGTCAATGACGCTGCGGACGCAGTTTTCCTTCTTGGCAATGTTCTaGAGCTGGCCCACCAGGGACGCCGTATTCTCGCTGCTCAGAGCG | + |
Preference number: 1 (lower is better) Translates to: WSMTLRTQFSFLAMF*SWPTRDAVFSLLRA Trigger: CGCTCTGAGCAGCGAGAATACGGCGTCCCTGGTGGGCCAGCTCCAGAACATTGCCAAGAAGGAAAACTGCGTCCGCAGCGTCATTGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR CCA 90 bp | CTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTaGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCATCAGAGAGAC | + |
Preference number: 1 (lower is better) Translates to: LLLSGDVIPGRCAFS*VQGASAPSRCHQRD Trigger: GTCTCTCTGATGACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR TCA 90 bp | AACTCTTCATTCTCAGGGTCCCAGGTGAGAAGGTTCAGGAATCCTTaGGACAGCACCATCGCGGGGCTGAGTGGCTCTGGGACGGCGACA | + |
Preference number: 1 (lower is better) Translates to: NSSFSGSQVRRFRNP*DSTIAGLSGSGTAT Trigger: TGTCGCCGTCCCAGAGCCACTCAGCCCCGCGATGGTGCTGTCTCAAGGATTCCTGAACCTTCTCACCTGGGACCCTGAGAATGAAGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR TCA 90 bp | CGGTGTAATACGGGGCAAACACCTGCTGGTTGTGATGGGTCAGGCTaGCAAACTTCTGGCCCAGTTCCGCCAGCTCAGCTTCGATCAGAG | + |
Preference number: 1 (lower is better) Translates to: RCNTGQTPAGCDGSG*QTSGPVPPAQLRSE Trigger: CTCTGATCGAAGCTGAGCTGGCGGAACTGGGCCAGAAGTTTGTCAGCCTGACCCATCACAACCAGCAGGTGTTTGCCCCGTATTACACCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR CCA 90 bp | TCCTCCACCAGGGACTTCGTGATTTGTTTCAGCTTGTCTACAAACTaGGGTGAGCTAAACAGACCACTGTCAGAGAAGCTACTGGCCACC | + |
Preference number: 1 (lower is better) Translates to: SSTRDFVICFSLSTN*GELNRPLSEKLLAT Trigger: GGTGGCCAGTAGCTTCTCTGACAGTGGTCTGTTTAGCTCACCCCAGTTTGTAGACAAGCTGAAACAAATCACGAAGTCCCTGGTGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR CCA 90 bp | TGCACACCCAGGACAAAGCAGCACTTGAGGAACAAGTGTATACGCTaGTCAATGACGCTGCGGACGCAGTTTTCCTTCTTGGCAATGTTC | + |
Preference number: 1 (lower is better) Translates to: CTPRTKQHLRNKCIR*SMTLRTQFSFLAMF Trigger: GAACATTGCCAAGAAGGAAAACTGCGTCCGCAGCGTCATTGACCAGCGTATACACTTGTTCCTCAAGTGCTGCTTTGTCCTGGGTGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR TCA 90 bp | CACCAGGGACTTCGTGATTTGTTTCAGCTTGTCTACAAACTGGGGTaGGCTAAACAGACCACTGTCAGAGAAGCTACTGGCCACCAGCAA | + |
Preference number: 1 (lower is better) Translates to: HQGLRDLFQLVYKLG*AKQTTVREATGHQQ Trigger: TTGCTGGTGGCCAGTAGCTTCTCTGACAGTGGTCTGTTTAGCTCACCCCAGTTTGTAGACAAGCTGAAACAAATCACGAAGTCCCTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR TCA 90 bp | ACCTTGCCTTTCAGGCTGCTTGAAGATAAACTCCTTTCTTCCAACTaGCAATCAAGCTTGGAAGCGTCATGGACTCTCTCCGTCATACCT | + |
Preference number: 1 (lower is better) Translates to: TLPFRLLEDKLLSSN*QSSLEASWTLSVIP Trigger: AGGTATGACGGAGAGAGTCCATGACGCTTCCAAGCTTGATTGTCAGTTGGAAGAAAGGAGTTTATCTTCAAGCAGCCTGAAAGGCAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233615.2 |
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3UTR-3UTR GCA 90 bp | GAGATGGGCCGGCCGAGCTGGAGCAGTCCTGCAAGTCAGAGGAACTGGCAGAGGTTCTTCAGGCGGCTCTaGCGTGGCAGCAGCAGGGAC | + |
Preference number: 2 (lower is better) Translates to: EMGRPSWSSPASQRNWQRFFRRL*RGSSRD Trigger: GTCCCTGCTGCTGCCACGGCAGAGCCGCCTGAAGAA...CCTCTGCCAGTTCCTCTGACTTGCAGGACTGCTCCAGCTCGGCCGGCCCATCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR-3UTR TCA 90 bp | TGGCCCAGTTCCGCCAGCTCAGCTTCGATCAGAGTGAGGCCCCCGGGAAGGTCCTGGGCATGGTGTCCTTaGCCTTGCCTTTCAGGCTGC | + |
Preference number: 2 (lower is better) Translates to: WPSSASSASIRVRPPGRSWAWCP*PCLSGC Trigger: GCAGCCTGAAAGGCAAGGTCAAGGACACCATGCCCA...GGACCTTCCCGGGGGCCTCACTCTGATCGAAGCTGAGCTGGCGGAACTGGGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR-3UTR GCA 90 bp | CTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCATCAGAGAGACCCACCCTCCTGGGTCCAAGGTaGCAGTGCTCCGAGCCGATG | + |
Preference number: 2 (lower is better) Translates to: LLGPRCQCSEPMSSERPTLLGPR*QCSEPM Trigger: CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAG...GGTGGGTCTCTCTGATGACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR GCA 90 bp | CAGAGTGAGGCCCCCGGGAAGGTCCAAGAGGGATCGCTGCACACCCAGGACAAACTCCTGGGTCCAAGGTaGCAGTGCTCCGAGCCGATG | + |
Preference number: 2 (lower is better) Translates to: QSEAPGKVQEGSLHTQDKLLGPR*QCSEPM Trigger: CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAG...TTTGTCCTGGGTGTGCAGCGATCCCTCTTGGACCTTCCCGGGGGCCTCACTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR CCA 90 bp | TTCGATCAGAGTGAGGCCCCCGGGAAGGTCCAAGAGGGATCGCTGCACACCCAGATGGGCCGGCCGAGCTaGAGCAGTCCTGCAAGTCAG | + |
Preference number: 2 (lower is better) Translates to: FDQSEAPGKVQEGSLHTQMGRPS*SSPASQ Trigger: CTGACTTGCAGGACTGCTCCAGCTCGGCCGGCCCAT...CTGGGTGTGCAGCGATCCCTCTTGGACCTTCCCGGGGGCCTCACTCTGATCGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR-3UTR TCA 90 bp | GGTGGACTTCCTCCACCACCTGCTCACTCACTGACTGCATCACTTCCTCGGGCCTGGACGGAGTGTTCCTaGAGCTGGGGCTGGAGGCTC | + |
Preference number: 2 (lower is better) Translates to: GGLPPPPAHSLTASLPRAWTECS*SWGWRL Trigger: GAGCCTCCAGCCCCAGCTTCAGGAACACTCCGTCCA...GGCCCGAGGAAGTGATGCAGTCAGTGAGTGAGCAGGTGGTGGAGGAAGTCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR-3UTR GCA 90 bp | GCTTCCTCGATCTCATTCTTCAGGCGGCTCTGCCGTGGCAGCAGCAGGGACAACCTCCTGGGTCCAAGGTaGCAGTGCTCCGAGCCGATG | + |
Preference number: 2 (lower is better) Translates to: ASSISFFRRLCRGSSRDNLLGPR*QCSEPM Trigger: CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAG...GTTGTCCCTGCTGCTGCCACGGCAGAGCCGCCTGAAGAATGAGATCGAGGAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR-3UTR GCA 90 bp | CAGAGTGAGGCCCCCGGGAAGGTCCAAGAGGGATCGCTGCACACCCAGGACAAAGGGCAGAGGGGACCCTaGTGCTCAGTGGTGATGTCA | + |
Preference number: 2 (lower is better) Translates to: QSEAPGKVQEGSLHTQDKGQRGP*CSVVMS Trigger: TGACATCACCACTGAGCAGCAGGGTCCCCTCTGCCC...TTTGTCCTGGGTGTGCAGCGATCCCTCTTGGACCTTCCCGGGGGCCTCACTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR TCA 90 bp | GCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCATCAGAGAGACTGGACGGAGTGTTCCTaGAGCTGGGGCTGGAGGCTC | + |
Preference number: 2 (lower is better) Translates to: AFSWVQGASAPSRCHQRDWTECS*SWGWRL Trigger: GAGCCTCCAGCCCCAGCTTCAGGAACACTCCGTCCA...GTCTCTCTGATGACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR-3UTR TCA 90 bp | ATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGAGTCTGGGCTCTTTGTTaGGGCGCTCCTGGAACTGAG | + |
Preference number: 2 (lower is better) Translates to: IPGRCAFSWVQGASAPSRVWALC*GAPGTE Trigger: CTCAGTTCCAGGAGCGCCTCAACAAAGAGCCCAGAC...TCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR-3UTR TCA 90 bp | CAGAGTGAGGCCCCCGGGAAGGTCCAAGAGGGATCGCTGCACACCCAGGACAAACACCTGCTCACTCACTaGCTGCATCACTTCCTCGGG | + |
Preference number: 2 (lower is better) Translates to: QSEAPGKVQEGSLHTQDKHLLTH*LHHFLG Trigger: CCCGAGGAAGTGATGCAGTCAGTGAGTGAGCAGGTG...TTTGTCCTGGGTGTGCAGCGATCCCTCTTGGACCTTCCCGGGGGCCTCACTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR TCA 90 bp | GCGACATCACTGGGAGATGGGCCGGCCGAGCTGGAGCAGTCCTGCAAGTCAGAGACTTCGTGGTGTGGTTaGGGAGTCTGGGCTCTTTGT | + |
Preference number: 2 (lower is better) Translates to: ATSLGDGPAELEQSCKSETSWCG*GVWALC Trigger: ACAAAGAGCCCAGACTCCTCAACCACACCACGAAGT...CTCTGACTTGCAGGACTGCTCCAGCTCGGCCGGCCCATCTCCCAGTGATGTCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR-3UTR TCA 90 bp | CAGAGAAGCTACTGGCCACCAGCAAGACAGAGGCAAGGATGGTTAGCTGACTCTTGGCAGAGGGGGCAATaGGCTGTGTGGCCGCCTGGG | + |
Preference number: 2 (lower is better) Translates to: QRSYWPPARQRQGWLADSWQRGQ*AVWPPG Trigger: CCCAGGCGGCCACACAGCTCATTGCCCCCTCTGCCA...AGAGTCAGCTAACCATCCTTGCCTCTGTCTTGCTGGTGGCCAGTAGCTTCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR-3UTR TCA 90 bp | CCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCATCAGAGAGACCCACCTTGCAAGGATGGTTAGCTaGCTCTGCTGCGACTCCAGC | + |
Preference number: 2 (lower is better) Translates to: PGSKVPVLRADVIRETHLARMVS*LCCDSS Trigger: GCTGGAGTCGCAGCAGAGTCAGCTAACCATCCTTGC...AAGGTGGGTCTCTCTGATGACATCGGCTCGGAGCACTGGCACCTTGGACCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR GCA 90 bp | CTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAACTCCTGGGTCCAAGGTaGCAGTGCTCCGAGCCGATG | + |
Preference number: 2 (lower is better) Translates to: LLLSGDVIPGRCAFSWVQLLGPR*QCSEPM Trigger: CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAG...TTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232728.2 ENSMUST00000232798.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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3UTR-3UTR GCA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGGGCAGAGGGGACCCTaGTGCTCAGTGGTGATGTCA | + |
Preference number: 2 (lower is better) Translates to: MSSQGDALSPGSKVPVLRGQRGP*CSVVMS Trigger: TGACATCACCACTGAGCAGCAGGGTCCCCTCTGCCC...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232728.2 ENSMUST00000232798.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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3UTR-3UTR GCA 90 bp | CCCCTCAGCAGCCGGACCGGATCTGAAATGTTCTCAAGTCTCTGCACAGCCTCGGGGCAGAGGGGACCCTaGTGCTCAGTGGTGATGTCA | + |
Preference number: 2 (lower is better) Translates to: PLSSRTGSEMFSSLCTASGQRGP*CSVVMS Trigger: TGACATCACCACTGAGCAGCAGGGTCCCCTCTGCCC...CGAGGCTGTGCAGAGACTTGAGAACATTTCAGATCCGGTCCGGCTGCTGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR-3UTR GCA 90 bp | AGGCCCCCGGGAAGGTCCAAGAGGGATCGCTGCACACCCAGGACAAAGCAGCACACTTCCTCCACCACCTaGTCACTCACTGACTGCATC | + |
Preference number: 2 (lower is better) Translates to: RPPGRSKRDRCTPRTKQHTSSTT*SLTDCI Trigger: GATGCAGTCAGTGAGTGAGCAGGTGGTGGAGGAAGT...GTGCTGCTTTGTCCTGGGTGTGCAGCGATCCCTCTTGGACCTTCCCGGGGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR CCA 90 bp | TCAGAGCGGCCAACCCCATGCTCTCGAGACCCTGGTGGACTTCCTCCACCACCTAGCCACTTCGTGGTGTaGTTGAGGAGTCTGGGCTCT | + |
Preference number: 2 (lower is better) Translates to: SERPTPCSRDPGGLPPPPSHFVV*LRSLGS Trigger: AGAGCCCAGACTCCTCAACCACACCACGAAGTGGCT...AGGTGGTGGAGGAAGTCCACCAGGGTCTCGAGAGCATGGGGTTGGCCGCTCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR-3UTR TCA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGACCTGCTGCTCAGTGGTaGTGTCATCCCAGGGAGATG | + |
Preference number: 2 (lower is better) Translates to: MSSQGDALSPGSKVPVLRPAAQW*CHPREM Trigger: CATCTCCCTGGGATGACATCACCACTGAGCAGCAGG...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232728.2 ENSMUST00000232798.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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3UTR-3UTR TCA 90 bp | AAACAGACCACTGTCAGAGAAGCTACTGGCCACCAGCAAGACAGAGGCAAGGATTGGCAGAGGGGGCAATaGGCTGTGTGGCCGCCTGGG | + |
Preference number: 2 (lower is better) Translates to: KQTTVREATGHQQDRGKDWQRGQ*AVWPPG Trigger: CCCAGGCGGCCACACAGCTCATTGCCCCCTCTGCCA...ATCCTTGCCTCTGTCTTGCTGGTGGCCAGTAGCTTCTCTGACAGTGGTCTGTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR-3UTR GCA 90 bp | CTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGGCAGAGGGGACCCTaGTGCTCAGTGGTGATGTCA | + |
Preference number: 2 (lower is better) Translates to: LLLSGDVIPGRCAFSWVQGQRGP*CSVVMS Trigger: TGACATCACCACTGAGCAGCAGGGTCCCCTCTGCCC...TTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232728.2 ENSMUST00000232798.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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3UTR-3UTR TCA 90 bp | TGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGCCTGCTGCTCAGTGGTaGTGTCATCCCAGGGAGATG | + |
Preference number: 2 (lower is better) Translates to: CCSVVMSSQGDALSPGSKPAAQW*CHPREM Trigger: CATCTCCCTGGGATGACATCACCACTGAGCAGCAGG...CTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232728.2 ENSMUST00000232798.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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3UTR-3UTR TCA 90 bp | CTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAACCTGCTGCTCAGTGGTaGTGTCATCCCAGGGAGATG | + |
Preference number: 2 (lower is better) Translates to: LLLSGDVIPGRCAFSWVQPAAQW*CHPREM Trigger: CATCTCCCTGGGATGACATCACCACTGAGCAGCAGG...TTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232728.2 ENSMUST00000232798.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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3UTR-3UTR GCA 90 bp | GCAGCCGGGGTCTGTCTGCCACTAGGGTTTCAGGAAACTCTTCATTCTCAGGGTGGGCAGAGGGGACCCTaGTGCTCAGTGGTGATGTCA | + |
Preference number: 2 (lower is better) Translates to: AAGVCLPLGFQETLHSQGGQRGP*CSVVMS Trigger: TGACATCACCACTGAGCAGCAGGGTCCCCTCTGCCC...ACCCTGAGAATGAAGAGTTTCCTGAAACCCTAGTGGCAGACAGACCCCGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR CCA 90 bp | AAACAGACCACTGTCAGAGAAGCTACTGGCCACCAGCAAGACAGAGGCAAGGATCATCGCGGGGCTGAGTaGCTCTGGGACGGCGACATC | + |
Preference number: 2 (lower is better) Translates to: KQTTVREATGHQQDRGKDHRGAE*LWDGDI Trigger: GATGTCGCCGTCCCAGAGCCACTCAGCCCCGCGATG...ATCCTTGCCTCTGTCTTGCTGGTGGCCAGTAGCTTCTCTGACAGTGGTCTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 |
||
3UTR CAA 90 bp | GGAAGGTCCAAGAGGGATCGCTGCACACCCAGGACAAAGCAGCACTaGAGGAACAAGTGTATACGCTGGTCAATGACGCTGCGGACGCAG | + |
Preference number: 2 (lower is better) Translates to: GRSKRDRCTPRTKQH*RNKCIRWSMTLRTQ Trigger: CTGCGTCCGCAGCGTCATTGACCAGCGTATACACTTGTTCCTCAAGTGCTGCTTTGTCCTGGGTGTGCAGCGATCCCTCTTGGACCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR TCA 90 bp | AGGTCCAAGAGGGATCGCTGCACACCCAGGACAAAGCAGCACTTGAGGAACAAGGCAAGGATGGTTAGCTaGCTCTGCTGCGACTCCAGC | + |
Preference number: 2 (lower is better) Translates to: RSKRDRCTPRTKQHLRNKARMVS*LCCDSS Trigger: GCTGGAGTCGCAGCAGAGTCAGCTAACCATCCTTGC...CTTGTTCCTCAAGTGCTGCTTTGTCCTGGGTGTGCAGCGATCCCTCTTGGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR GCA 90 bp | AGGGATCGCTGCACACCCAGGACAAAGCAGCACTTGAGGAACAAGTGTATACGCGGGCAGAGGGGACCCTaGTGCTCAGTGGTGATGTCA | + |
Preference number: 2 (lower is better) Translates to: RDRCTPRTKQHLRNKCIRGQRGP*CSVVMS Trigger: TGACATCACCACTGAGCAGCAGGGTCCCCTCTGCCC...GCGTATACACTTGTTCCTCAAGTGCTGCTTTGTCCTGGGTGTGCAGCGATCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR GCA 90 bp | GCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCATCAGAGAGACACTTCCTCCACCACCTaGTCACTCACTGACTGCATC | + |
Preference number: 2 (lower is better) Translates to: AFSWVQGASAPSRCHQRDTSSTT*SLTDCI Trigger: GATGCAGTCAGTGAGTGAGCAGGTGGTGGAGGAAGT...GTCTCTCTGATGACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR CCA 90 bp | TGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGATCTGTCCCAAGACCTaGAAGATCCCCCTCAGCAGC | + |
Preference number: 2 (lower is better) Translates to: CCSVVMSSQGDALSPGSKICPKT*KIPLSS Trigger: GCTGCTGAGGGGGATCTTCCAGGTCTTGGGACAGAT...CTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR-3UTR GCA 90 bp | ACTAGGGTTTCAGGAAACTCTTCATTCTCAGGGTCCCAGGTGAGAAGGTTCAGGTTCTTCAGGCGGCTCTaGCGTGGCAGCAGCAGGGAC | + |
Preference number: 2 (lower is better) Translates to: TRVSGNSSFSGSQVRRFRFFRRL*RGSSRD Trigger: GTCCCTGCTGCTGCCACGGCAGAGCCGCCTGAAGAA...CCTGAACCTTCTCACCTGGGACCCTGAGAATGAAGAGTTTCCTGAAACCCTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR-3UTR TCA 90 bp | GCCACTAGGGTTTCAGGAAACTCTTCATTCTCAGGGTCCCAGGTGAGAAGGTTCCCTGCTGCTCAGTGGTaGTGTCATCCCAGGGAGATG | + |
Preference number: 2 (lower is better) Translates to: ATRVSGNSSFSGSQVRRFPAAQW*CHPREM Trigger: CATCTCCCTGGGATGACATCACCACTGAGCAGCAGG...GAACCTTCTCACCTGGGACCCTGAGAATGAAGAGTTTCCTGAAACCCTAGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR TCA 90 bp | CAGAGTGAGGCCCCCGGGAAGGTCCAAGAGGGATCGCTGCACACCCAGGACAAAACAACAGGATCTCTTTaGTCTCCTTCAGAAGCTCAA | + |
Preference number: 2 (lower is better) Translates to: QSEAPGKVQEGSLHTQDKTTGSL*SPSEAQ Trigger: TTGAGCTTCTGAAGGAGATCAAAGAGATCCTGTTGT...TTTGTCCTGGGTGTGCAGCGATCCCTCTTGGACCTTCCCGGGGGCCTCACTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR-3UTR CCA 90 bp | CAGAGAAGCTACTGGCCACCAGCAAGACAGAGGCAAGGATGGTTAGCTGACTCTATCTGTCCCAAGACCTaGAAGATCCCCCTCAGCAGC | + |
Preference number: 2 (lower is better) Translates to: QRSYWPPARQRQGWLADSICPKT*KIPLSS Trigger: GCTGCTGAGGGGGATCTTCCAGGTCTTGGGACAGAT...AGAGTCAGCTAACCATCCTTGCCTCTGTCTTGCTGGTGGCCAGTAGCTTCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR-3UTR CCA 90 bp | TGTCATCAGAGAGACCCACCTTTGGTGGCCAGGGTCTGGGCTGGGGAGATGAGGTTCACAAGTTTATTATaGAGCGGGTTTGGGCCAGTT | + |
Preference number: 2 (lower is better) Translates to: CHQRDPPLVARVWAGEMRFTSLL*SGFGPV Trigger: AACTGGCCCAAACCCGCTCCATAATAAACTTGTGAA...CCTCATCTCCCCAGCCCAGACCCTGGCCACCAAAGGTGGGTCTCTCTGATGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR CAA 90 bp | ACCACCTGCTCACTCACTGACTGCATCACTTCCTCGGGCCTGGAGTaGAAATCCTCCACCAGGGACTTCGTGATTTGTTTCAGCTTGTCT | + |
Preference number: 2 (lower is better) Translates to: TTCSLTDCITSSGLE*KSSTRDFVICFSLS Trigger: AGACAAGCTGAAACAAATCACGAAGTCCCTGGTGGAGGATTTCAACTCCAGGCCCGAGGAAGTGATGCAGTCAGTGAGTGAGCAGGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR TCA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGTTTGGGCCAGTTGTTaGCATGTTTGTCTTGTTACA | + |
Preference number: 2 (lower is better) Translates to: MSSQGDALSPGSKVPVLRVWASC*HVCLVT Trigger: TGTAACAAGACAAACATGTCAACAACTGGCCCAAAC...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232728.2 ENSMUST00000232798.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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3UTR-3UTR TCA 90 bp | TCCTCCACCACCTGCTCACTCACTGACTGCATCACTTCCTCGGGCCTGGAGTTGGTTTGGGCCAGTTGTTaGCATGTTTGTCTTGTTACA | + |
Preference number: 2 (lower is better) Translates to: SSTTCSLTDCITSSGLELVWASC*HVCLVT Trigger: TGTAACAAGACAAACATGTCAACAACTGGCCCAAAC...CAACTCCAGGCCCGAGGAAGTGATGCAGTCAGTGAGTGAGCAGGTGGTGGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR TCA 90 bp | TTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCATCAGAGAGACCCAACAACAGGATCTCTTTaGTCTCCTTCAGAAGCTCAA | + |
Preference number: 2 (lower is better) Translates to: FSWVQGASAPSRCHQRDPTTGSL*SPSEAQ Trigger: TTGAGCTTCTGAAGGAGATCAAAGAGATCCTGTTGT...TGGGTCTCTCTGATGACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR-3UTR CCA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGATTCACAAGTTTATTATaGAGCGGGTTTGGGCCAGTT | + |
Preference number: 2 (lower is better) Translates to: MSSQGDALSPGSKVPVLRFTSLL*SGFGPV Trigger: AACTGGCCCAAACCCGCTCCATAATAAACTTGTGAA...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232728.2 ENSMUST00000232798.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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3UTR-3UTR TCA 90 bp | CTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGTTTGGGCCAGTTGTTaGCATGTTTGTCTTGTTACA | + |
Preference number: 2 (lower is better) Translates to: LLLSGDVIPGRCAFSWVQVWASC*HVCLVT Trigger: TGTAACAAGACAAACATGTCAACAACTGGCCCAAAC...TTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232728.2 ENSMUST00000232798.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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3UTR-3UTR CCA 90 bp | TGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGTTCACAAGTTTATTATaGAGCGGGTTTGGGCCAGTT | + |
Preference number: 2 (lower is better) Translates to: CCSVVMSSQGDALSPGSKFTSLL*SGFGPV Trigger: AACTGGCCCAAACCCGCTCCATAATAAACTTGTGAA...CTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232728.2 ENSMUST00000232798.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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3UTR-3UTR CCA 90 bp | CTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAATTCACAAGTTTATTATaGAGCGGGTTTGGGCCAGTT | + |
Preference number: 2 (lower is better) Translates to: LLLSGDVIPGRCAFSWVQFTSLL*SGFGPV Trigger: AACTGGCCCAAACCCGCTCCATAATAAACTTGTGAA...TTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232728.2 ENSMUST00000232798.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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3UTR-3UTR GCA 90 bp | ACAAGTTTATTATGGAGCGGGTTTGGGCCAGTTGTTGACATGTTTGTCTTGTTACTCCTGGGTCCAAGGTaGCAGTGCTCCGAGCCGATG | + |
Preference number: 2 (lower is better) Translates to: TSLLWSGFGPVVDMFVLLLLGPR*QCSEPM Trigger: CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAG...TAACAAGACAAACATGTCAACAACTGGCCCAAACCCGCTCCATAATAAACTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232728.2 ENSMUST00000232798.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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3UTR-3UTR CCA 90 bp | GTCCAAGAGGGATCGCTGCACACCCAGGACAAAGCAGCACTTGAGGAACAAGTGTTCACAAGTTTATTATaGAGCGGGTTTGGGCCAGTT | + |
Preference number: 2 (lower is better) Translates to: VQEGSLHTQDKAALEEQVFTSLL*SGFGPV Trigger: AACTGGCCCAAACCCGCTCCATAATAAACTTGTGAA...CACTTGTTCCTCAAGTGCTGCTTTGTCCTGGGTGTGCAGCGATCCCTCTTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR TCA 90 bp | ACAAGTTTATTATGGAGCGGGTTTGGGCCAGTTGTTGACATGTTTGTCTTGTTACCTGCTGCTCAGTGGTaGTGTCATCCCAGGGAGATG | + |
Preference number: 2 (lower is better) Translates to: TSLLWSGFGPVVDMFVLLPAAQW*CHPREM Trigger: CATCTCCCTGGGATGACATCACCACTGAGCAGCAGG...TAACAAGACAAACATGTCAACAACTGGCCCAAACCCGCTCCATAATAAACTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232728.2 ENSMUST00000232798.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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3UTR-3UTR CAA 90 bp | TGGCTCTGGGACGGCGACATCACTGGGAGATGGGCCGGCCGAGCTGGAGCAGTCCTGGGCATGGTGTCCTaGACCTTGCCTTTCAGGCTG | + |
Preference number: 3 (lower is better) Translates to: WLWDGDITGRWAGRAGAVLGMVS*TLPFRL Trigger: CAGCCTGAAAGGCAAGGTCAAGGACACCATGCCCAG...GACTGCTCCAGCTCGGCCGGCCCATCTCCCAGTGATGTCGCCGTCCCAGAGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR TCA 72 bp | TCTGGCCCAGTTCCGCCAGCTCAGCTTCGATCAGAGTaGGGCCCCCGGGAAGGTCCAAGAGGGATCGCTGCA | + |
Preference number: 3 (lower is better) Translates to: SGPVPPAQLRSE*GPREGPRGIAA Trigger: TGCAGCGATCCCTCTTGGACCTTCCCGGGGGCCTCACTCTGATCGAAGCTGAGCTGGCGGAACTGGGCCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR CCA 72 bp | CAGGAATCCTTGAGACAGCACCATCGCGGGGCTGAGTaGCTCTGGGACGGCGACATCACTGGGAGATGGGCC | + |
Preference number: 3 (lower is better) Translates to: QESLRQHHRGAE*LWDGDITGRWA Trigger: GGCCCATCTCCCAGTGATGTCGCCGTCCCAGAGCCACTCAGCCCCGCGATGGTGCTGTCTCAAGGATTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR GCA 72 bp | ACGCCGTATTCTCGCTGCTCAGAGCGGCCAACCCCATaGTCTCGAGACCCTGGTGGACTTCCTCCACCACCT | + |
Preference number: 3 (lower is better) Translates to: TPYSRCSERPTP*SRDPGGLPPPP Trigger: AGGTGGTGGAGGAAGTCCACCAGGGTCTCGAGAGCATGGGGTTGGCCGCTCTGAGCAGCGAGAATACGGCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR CCA 72 bp | GAACTGGCAGAGGGGGCAATGAGCTGTGTGGCCGCCTaGGTGAGCCACTTCGTGGTGTGGTTGAGGAGTCTG | + |
Preference number: 3 (lower is better) Translates to: ELAEGAMSCVAA*VSHFVVWLRSL Trigger: CAGACTCCTCAACCACACCACGAAGTGGCTCACCCAGGCGGCCACACAGCTCATTGCCCCCTCTGCCAGTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR CCA 72 bp | CTCAGAGCGGCCAACCCCATGCTCTCGAGACCCTGGTaGACTTCCTCCACCACCTGCTCACTCACTGACTGC | + |
Preference number: 3 (lower is better) Translates to: LRAANPMLSRPW*TSSTTCSLTDC Trigger: GCAGTCAGTGAGTGAGCAGGTGGTGGAGGAAGTCCACCAGGGTCTCGAGAGCATGGGGTTGGCCGCTCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR CAA 90 bp | GCGACATCACTGGGAGATGGGCCGGCCGAGCTGGAGCAGTCCTGCAAGTCAGAGCACTTCGTGGTGTGGTaGAGGAGTCTGGGCTCTTTG | + |
Preference number: 3 (lower is better) Translates to: ATSLGDGPAELEQSCKSEHFVVW*RSLGSL Trigger: CAAAGAGCCCAGACTCCTCAACCACACCACGAAGTG...CTCTGACTTGCAGGACTGCTCCAGCTCGGCCGGCCCATCTCCCAGTGATGTCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR GCA 72 bp | ACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATaGGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCG | + |
Preference number: 3 (lower is better) Translates to: TLLLSGDVIPGR*AFSWVQGASAP Trigger: CGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232728.2 ENSMUST00000232798.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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3UTR GCA 72 bp | CATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTaGCAGTGCTCCGAGCCGATGTCATCAGAGAGACCC | + |
Preference number: 3 (lower is better) Translates to: HPREMRFLLGPR*QCSEPMSSERP Trigger: GGGTCTCTCTGATGACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR CAA 90 bp | ATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGACACTTCGTGGTGTGGTaGAGGAGTCTGGGCTCTTTG | + |
Preference number: 3 (lower is better) Translates to: IPGRCAFSWVQGASAPSRHFVVW*RSLGSL Trigger: CAAAGAGCCCAGACTCCTCAACCACACCACGAAGTG...TCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR GCA 72 bp | ATGCTCTCGAGACCCTGGTGGACTTCCTCCACCACCTaGTCACTCACTGACTGCATCACTTCCTCGGGCCTG | + |
Preference number: 3 (lower is better) Translates to: MLSRPWWTSSTT*SLTDCITSSGL Trigger: CAGGCCCGAGGAAGTGATGCAGTCAGTGAGTGAGCAGGTGGTGGAGGAAGTCCACCAGGGTCTCGAGAGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR CCA 72 bp | ACGCTGCGGACGCAGTTTTCCTTCTTGGCAATGTTCTaGAGCTGGCCCACCAGGGACGCCGTATTCTCGCTG | + |
Preference number: 3 (lower is better) Translates to: TLRTQFSFLAMF*SWPTRDAVFSL Trigger: CAGCGAGAATACGGCGTCCCTGGTGGGCCAGCTCCAGAACATTGCCAAGAAGGAAAACTGCGTCCGCAGCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR CAA 90 bp | ATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGAATGGTGTCCTTGACCTaGCCTTTCAGGCTGCTTGAA | + |
Preference number: 3 (lower is better) Translates to: IPGRCAFSWVQGASAPSRMVSLT*PFRLLE Trigger: TTCAAGCAGCCTGAAAGGCAAGGTCAAGGACACCAT...TCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR TCA 72 bp | ACGGGGCAAACACCTGCTGGTTGTGATGGGTCAGGCTaGCAAACTTCTGGCCCAGTTCCGCCAGCTCAGCTT | + |
Preference number: 3 (lower is better) Translates to: TGQTPAGCDGSG*QTSGPVPPAQL Trigger: AAGCTGAGCTGGCGGAACTGGGCCAGAAGTTTGTCAGCCTGACCCATCACAACCAGCAGGTGTTTGCCCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR GCA 72 bp | AGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTaGTCCGAGCCGATGTCATCAGAGAGACCCACCTTT | + |
Preference number: 3 (lower is better) Translates to: REMRFLLGPRCQ*SEPMSSERPTF Trigger: AAAGGTGGGTCTCTCTGATGACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR CCA 72 bp | AGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTaGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCAT | + |
Preference number: 3 (lower is better) Translates to: SGDVIPGRCAFS*VQGASAPSRCH Trigger: ATGACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR CAA 90 bp | GCGACATCACTGGGAGATGGGCCGGCCGAGCTGGAGCAGTCCTGCAAGTCAGAGGACAACAGGATCTCTTaGATCTCCTTCAGAAGCTCA | + |
Preference number: 3 (lower is better) Translates to: ATSLGDGPAELEQSCKSEDNRIS*ISFRSS Trigger: TGAGCTTCTGAAGGAGATCAAAGAGATCCTGTTGTC...CTCTGACTTGCAGGACTGCTCCAGCTCGGCCGGCCCATCTCCCAGTGATGTCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233009.2 ENSMUST00000233615.2 |
||
3UTR CCA 72 bp | TGTCATCAGAGAGACCCACCTTTGGTGGCCAGGGTCTaGGCTGGGGAGATGAGGGTTTTTAAGATCTCGGTG | + |
Preference number: 3 (lower is better) Translates to: CHQRDPPLVARV*AGEMRVFKISV Trigger: CACCGAGATCTTAAAAACCCTCATCTCCCCAGCCCAGACCCTGGCCACCAAAGGTGGGTCTCTCTGATGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
||
3UTR-3UTR CAA 90 bp | TTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCATCAGAGAGACCCGTTGACATGTTTGTCTaGTTACAGCCCTGGTGTGCT | + |
Preference number: 3 (lower is better) Translates to: FLLGPRCQCSEPMSSERPVDMFV*LQPWCA Trigger: AGCACACCAGGGCTGTAACAAGACAAACATGTCAAC...GGGTCTCTCTGATGACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR CAA 90 bp | GCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCATCAGAGAGACGTTGACATGTTTGTCTaGTTACAGCCCTGGTGTGCT | + |
Preference number: 3 (lower is better) Translates to: AFSWVQGASAPSRCHQRDVDMFV*LQPWCA Trigger: AGCACACCAGGGCTGTAACAAGACAAACATGTCAAC...GTCTCTCTGATGACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR CAA 90 bp | ATGTCATCAGAGAGACCCACCTTTGGTGGCCAGGGTCTGGGCTGGGGAGATGAGGTTGACATGTTTGTCTaGTTACAGCCCTGGTGTGCT | + |
Preference number: 3 (lower is better) Translates to: MSSERPTFGGQGLGWGDEVDMFV*LQPWCA Trigger: AGCACACCAGGGCTGTAACAAGACAAACATGTCAAC...CTCATCTCCCCAGCCCAGACCCTGGCCACCAAAGGTGGGTCTCTCTGATGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
||
3UTR-3UTR CAA 90 bp | CCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCGGTTTGGGCCAGTTGTaGACATGTTTGTCTTGTTAC | + |
Preference number: 3 (lower is better) Translates to: PCCSVVMSSQGDALSPGSGLGQL*TCLSCY Trigger: GTAACAAGACAAACATGTCAACAACTGGCCCAAACC...GGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232728.2 ENSMUST00000232798.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
||
3UTR-3UTR CAA 90 bp | ACATCACTGGGAGATGGGCCGGCCGAGCTGGAGCAGTCCTGCAAGTCAGAGGAAGACAACAGGATCTCTTaGATCTCCTTCAGAAGCTCA | + |
Preference number: 3 (lower is better) Translates to: TSLGDGPAELEQSCKSEEDNRIS*ISFRSS Trigger: TGAGCTTCTGAAGGAGATCAAAGAGATCCTGTTGTC...TTCCTCTGACTTGCAGGACTGCTCCAGCTCGGCCGGCCCATCTCCCAGTGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR-3UTR CAA 90 bp | CCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCGTGATTTGTTTCAGCTaGTCTACAAACTGGGGTGAG | + |
Preference number: 3 (lower is better) Translates to: PCCSVVMSSQGDALSPGSVICFS*STNWGE Trigger: CTCACCCCAGTTTGTAGACAAGCTGAAACAAATCAC...GGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR CAA 90 bp | CTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGTTGACATGTTTGTCTaGTTACAGCCCTGGTGTGCT | + |
Preference number: 3 (lower is better) Translates to: LLLSGDVIPGRCAFSWVQVDMFV*LQPWCA Trigger: AGCACACCAGGGCTGTAACAAGACAAACATGTCAAC...TTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232728.2 ENSMUST00000232798.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
||
3UTR-3UTR CAA 90 bp | TGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGGTTTGGGCCAGTTGTaGACATGTTTGTCTTGTTAC | + |
Preference number: 3 (lower is better) Translates to: CCSVVMSSQGDALSPGSKGLGQL*TCLSCY Trigger: GTAACAAGACAAACATGTCAACAACTGGCCCAAACC...CTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232728.2 ENSMUST00000232798.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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3UTR-3UTR CAA 90 bp | CTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTTTGGGCCAGTTGTaGACATGTTTGTCTTGTTAC | + |
Preference number: 3 (lower is better) Translates to: LLLSGDVIPGRCAFSWVQGLGQL*TCLSCY Trigger: GTAACAAGACAAACATGTCAACAACTGGCCCAAACC...TTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232728.2 ENSMUST00000232798.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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3UTR-3UTR CAA 90 bp | GGAAGGTCCAAGAGGGATCGCTGCACACCCAGGACAAAGCAGCACTTGAGGAACGGTTTGGGCCAGTTGTaGACATGTTTGTCTTGTTAC | + |
Preference number: 3 (lower is better) Translates to: GRSKRDRCTPRTKQHLRNGLGQL*TCLSCY Trigger: GTAACAAGACAAACATGTCAACAACTGGCCCAAACC...GTTCCTCAAGTGCTGCTTTGTCCTGGGTGTGCAGCGATCCCTCTTGGACCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR CAA 90 bp | TTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCATCAGAGAGACCCAAACAAGACCATCATGTaGAGGATATACTTGGAGAGG | + |
Preference number: 3 (lower is better) Translates to: FSWVQGASAPSRCHQRDPNKTIM*RIYLER Trigger: CCTCTCCAAGTATATCCTCAACATGATGGTCTTGTT...TGGGTCTCTCTGATGACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR-3UTR CAA 90 bp | TCCAGCTCCTGCAGCCGGGGTCTGTCTGCCACTAGGGTTTCAGGAAACTCTTCATGCCTTTCAGGCTGCTaGAAGATAAACTCCTTTCTT | + |
Preference number: 3 (lower is better) Translates to: SSSCSRGLSATRVSGNSSCLSGC*KINSFL Trigger: AAGAAAGGAGTTTATCTTCAAGCAGCCTGAAAGGCA...TGAAGAGTTTCCTGAAACCCTAGTGGCAGACAGACCCCGGCTGCAGGAGCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR-3UTR CAA 90 bp | AAACAGACCACTGTCAGAGAAGCTACTGGCCACCAGCAAGACAGAGGCAAGGATGTTGACATGTTTGTCTaGTTACAGCCCTGGTGTGCT | + |
Preference number: 3 (lower is better) Translates to: KQTTVREATGHQQDRGKDVDMFV*LQPWCA Trigger: AGCACACCAGGGCTGTAACAAGACAAACATGTCAAC...ATCCTTGCCTCTGTCTTGCTGGTGGCCAGTAGCTTCTCTGACAGTGGTCTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR CAA 90 bp | GCTAAACAGACCACTGTCAGAGAAGCTACTGGCCACCAGCAAGACAGAGGCAAGGGTTTGGGCCAGTTGTaGACATGTTTGTCTTGTTAC | + |
Preference number: 3 (lower is better) Translates to: AKQTTVREATGHQQDRGKGLGQL*TCLSCY Trigger: GTAACAAGACAAACATGTCAACAACTGGCCCAAACC...CTTGCCTCTGTCTTGCTGGTGGCCAGTAGCTTCTCTGACAGTGGTCTGTTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR-3UTR CAA 90 bp | TGCAGCCGGGGTCTGTCTGCCACTAGGGTTTCAGGAAACTCTTCATTCTCAGGGAACAAGACCATCATGTaGAGGATATACTTGGAGAGG | + |
Preference number: 3 (lower is better) Translates to: CSRGLSATRVSGNSSFSGNKTIM*RIYLER Trigger: CCTCTCCAAGTATATCCTCAACATGATGGTCTTGTT...CCCTGAGAATGAAGAGTTTCCTGAAACCCTAGTGGCAGACAGACCCCGGCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR-3UTR CAA 90 bp | TCGCTGCACACCCAGGACAAAGCAGCACTTGAGGAACAAGTGTATACGCTGGTCTGCCTTTCAGGCTGCTaGAAGATAAACTCCTTTCTT | + |
Preference number: 3 (lower is better) Translates to: SLHTQDKAALEEQVYTLVCLSGC*KINSFL Trigger: AAGAAAGGAGTTTATCTTCAAGCAGCCTGAAAGGCA...GACCAGCGTATACACTTGTTCCTCAAGTGCTGCTTTGTCCTGGGTGTGCAGCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR TCA 72 bp | CACAAGTTTATTATGGAGCGGGTTTGGGCCAGTTGTTaGCATGTTTGTCTTGTTACAGCCCTGGTGTGCTGG | + |
Preference number: 3 (lower is better) Translates to: HKFIMERVWASC*HVCLVTALVCW Trigger: CCAGCACACCAGGGCTGTAACAAGACAAACATGTCAACAACTGGCCCAAACCCGCTCCATAATAAACTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232728.2 ENSMUST00000232798.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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3UTR-3UTR CAA 90 bp | ACTAGGGTTTCAGGAAACTCTTCATTCTCAGGGTCCCAGGTGAGAAGGTTCAGGGGTTTGGGCCAGTTGTaGACATGTTTGTCTTGTTAC | + |
Preference number: 3 (lower is better) Translates to: TRVSGNSSFSGSQVRRFRGLGQL*TCLSCY Trigger: GTAACAAGACAAACATGTCAACAACTGGCCCAAACC...CCTGAACCTTCTCACCTGGGACCCTGAGAATGAAGAGTTTCCTGAAACCCTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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3UTR CCA 72 bp | AATGTTCTCAAGTCTCTGCACAGCCTCGTCTCGGATTaGCGCACACAACAAGACCATCATGTTGAGGATATA | + |
Preference number: 3 (lower is better) Translates to: NVLKSLHSLVSD*RTQQDHHVEDI Trigger: TATATCCTCAACATGATGGTCTTGTTGTGTGCGCCAATCCGAGACGAGGCTGTGCAGAGACTTGAGAACATT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 |
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3UTR TCA 72 bp | TTCAGGCTGCTTGAAGATAAACTCCTTTCTTCCAACTaGCAATCAAGCTTGGAAGCGTCATGGACTCTCTCC | + |
Preference number: 3 (lower is better) Translates to: FRLLEDKLLSSN*QSSLEASWTLS Trigger: GGAGAGAGTCCATGACGCTTCCAAGCTTGATTGTCAGTTGGAAGAAAGGAGTTTATCTTCAAGCAGCCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233615.2 |
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CDS-3UTR TCA 90 bp | GTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCTGGCAGAGGGGGCAATaGGCTGTGTGGCCGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: VIPGRCAFSWVQGASAPSWQRGQ*AVWPPG Trigger: CCCAGGCGGCCACACAGCTCATTGCCCCCTCTGCCA...GCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | CAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCTGGCAGAGGGGGCAATaGGCTGTGTGGCCGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: QGDALSPGSKVPVLRADVWQRGQ*AVWPPG Trigger: CCCAGGCGGCCACACAGCTCATTGCCCCCTCTGCCA...GACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGCATCGCGGGGCTGAGTaGCTCTGGGACGGCGACATC | + |
Preference number: 4 (lower is better) Translates to: PREMRFLLGPRCQCSEPMHRGAE*LWDGDI Trigger: GATGTCGCCGTCCCAGAGCCACTCAGCCCCGCGATG...CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGATGGGCCGGCCGAGCTaGAGCAGTCCTGCAAGTCAG | + |
Preference number: 4 (lower is better) Translates to: PREMRFLLGPRCQCSEPMMGRPS*SSPASQ Trigger: CTGACTTGCAGGACTGCTCCAGCTCGGCCGGCCCAT...CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGGACATCACTGGGAGATaGGCCGGCCGAGCTGGAGCA | + |
Preference number: 4 (lower is better) Translates to: PREMRFLLGPRCQCSEPMDITGR*AGRAGA Trigger: TGCTCCAGCTCGGCCGGCCCATCTCCCAGTGATGTC...CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | TCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCCATCGCGGGGCTGAGTaGCTCTGGGACGGCGACATC | + |
Preference number: 4 (lower is better) Translates to: SSQGDALSPGSKVPVLRAHRGAE*LWDGDI Trigger: GATGTCGCCGTCCCAGAGCCACTCAGCCCCGCGATG...GGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | GTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCATCGCGGGGCTGAGTaGCTCTGGGACGGCGACATC | + |
Preference number: 4 (lower is better) Translates to: VIPGRCAFSWVQGASAPSHRGAE*LWDGDI Trigger: GATGTCGCCGTCCCAGAGCCACTCAGCCCCGCGATG...GCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | TCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGAGACCCACCTTTGGTaGCCAGGGTCTGGGCTGGGG | + |
Preference number: 4 (lower is better) Translates to: SSQGDALSPGSKVPVLRAETHLW*PGSGLG Trigger: CCCCAGCCCAGACCCTGGCCACCAAAGGTGGGTCTC...GGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCGAGACCCACCTTTGGTaGCCAGGGTCTGGGCTGGGG | + |
Preference number: 4 (lower is better) Translates to: QGDALSPGSKVPVLRADVETHLW*PGSGLG Trigger: CCCCAGCCCAGACCCTGGCCACCAAAGGTGGGTCTC...GACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | ATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGGACGGAGTGTTCCTaGAGCTGGGGCTGGAGGCTC | + |
Preference number: 4 (lower is better) Translates to: IPGRCAFSWVQGASAPSRWTECS*SWGWRL Trigger: GAGCCTCCAGCCCCAGCTTCAGGAACACTCCGTCCA...TCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | AGGGGACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTTGGCAGAGGGGGCAATaGGCTGTGTGGCCGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: RGPCCSVVMSSQGDALSPWQRGQ*AVWPPG Trigger: CCCAGGCGGCCACACAGCTCATTGCCCCCTCTGCCA...AGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGTCCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | CCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGCCTCGGGCCTGGAGTTaGAATCCTCCACCAGGGACT | + |
Preference number: 4 (lower is better) Translates to: PREMRFLLGPRCQCSEPMPRAWS*NPPPGT Trigger: AGTCCCTGGTGGAGGATTTCAACTCCAGGCCCGAGG...CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR GCA 90 bp | CAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCTTCTTCAGGCGGCTCTaGCGTGGCAGCAGCAGGGAC | + |
Preference number: 4 (lower is better) Translates to: QGDALSPGSKVPVLRADVFFRRL*RGSSRD Trigger: GTCCCTGCTGCTGCCACGGCAGAGCCGCCTGAAGAA...GACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR GCA 90 bp | ATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATTCTTCAGGCGGCTCTaGCGTGGCAGCAGCAGGGAC | + |
Preference number: 4 (lower is better) Translates to: IPGRCAFSWVQGASAPSRFFRRL*RGSSRD Trigger: GTCCCTGCTGCTGCCACGGCAGAGCCGCCTGAAGAA...TCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR GCA 90 bp | TCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCTTCTTCAGGCGGCTCTaGCGTGGCAGCAGCAGGGAC | + |
Preference number: 4 (lower is better) Translates to: SSQGDALSPGSKVPVLRAFFRRL*RGSSRD Trigger: GTCCCTGCTGCTGCCACGGCAGAGCCGCCTGAAGAA...GGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCATGGGCCGGCCGAGCTaGAGCAGTCCTGCAAGTCAG | + |
Preference number: 4 (lower is better) Translates to: QGDALSPGSKVPVLRADVMGRPS*SSPASQ Trigger: CTGACTTGCAGGACTGCTCCAGCTCGGCCGGCCCAT...GACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | TCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCATGGGCCGGCCGAGCTaGAGCAGTCCTGCAAGTCAG | + |
Preference number: 4 (lower is better) Translates to: SSQGDALSPGSKVPVLRAMGRPS*SSPASQ Trigger: CTGACTTGCAGGACTGCTCCAGCTCGGCCGGCCCAT...GGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCGACATCACTGGGAGATaGGCCGGCCGAGCTGGAGCA | + |
Preference number: 4 (lower is better) Translates to: QGDALSPGSKVPVLRADVDITGR*AGRAGA Trigger: TGCTCCAGCTCGGCCGGCCCATCTCCCAGTGATGTC...GACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTTGGTGGCCAGGGTCTaGGCTGGGGAGATGAGGGTT | + |
Preference number: 4 (lower is better) Translates to: PREMRFLLGPRCQCSEPMLVARV*AGEMRV Trigger: AACCCTCATCTCCCCAGCCCAGACCCTGGCCACCAA...CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | TGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGTGGCAGAGGGGGCAATaGGCTGTGTGGCCGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: CCSVVMSSQGDALSPGSKWQRGQ*AVWPPG Trigger: CCCAGGCGGCCACACAGCTCATTGCCCCCTCTGCCA...CTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | CCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGGCAAGGATGGTTAGCTaGCTCTGCTGCGACTCCAGC | + |
Preference number: 4 (lower is better) Translates to: PREMRFLLGPRCQCSEPMARMVS*LCCDSS Trigger: GCTGGAGTCGCAGCAGAGTCAGCTAACCATCCTTGC...CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | ATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGACCTCGGGCCTGGAGTTaGAATCCTCCACCAGGGACT | + |
Preference number: 4 (lower is better) Translates to: IPGRCAFSWVQGASAPSRPRAWS*NPPPGT Trigger: AGTCCCTGGTGGAGGATTTCAACTCCAGGCCCGAGG...TCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | CCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGCACCTGCTCACTCACTaGCTGCATCACTTCCTCGGG | + |
Preference number: 4 (lower is better) Translates to: PREMRFLLGPRCQCSEPMHLLTH*LHHFLG Trigger: CCCGAGGAAGTGATGCAGTCAGTGAGTGAGCAGGTG...CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCATGGGCCGGCCGAGCTaGAGCAGTCCTGCAAGTCAG | + |
Preference number: 4 (lower is better) Translates to: PCCSVVMSSQGDALSPGSMGRPS*SSPASQ Trigger: CTGACTTGCAGGACTGCTCCAGCTCGGCCGGCCCAT...GGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCGACATCACTGGGAGATaGGCCGGCCGAGCTGGAGCA | + |
Preference number: 4 (lower is better) Translates to: PCCSVVMSSQGDALSPGSDITGR*AGRAGA Trigger: TGCTCCAGCTCGGCCGGCCCATCTCCCAGTGATGTC...GGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGACATCGCGGGGCTGAGTaGCTCTGGGACGGCGACATC | + |
Preference number: 4 (lower is better) Translates to: MSSQGDALSPGSKVPVLRHRGAE*LWDGDI Trigger: GATGTCGCCGTCCCAGAGCCACTCAGCCCCGCGATG...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | AGGGGACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTCATCGCGGGGCTGAGTaGCTCTGGGACGGCGACATC | + |
Preference number: 4 (lower is better) Translates to: RGPCCSVVMSSQGDALSPHRGAE*LWDGDI Trigger: GATGTCGCCGTCCCAGAGCCACTCAGCCCCGCGATG...AGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGTCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | TCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCTTGGTGGCCAGGGTCTaGGCTGGGGAGATGAGGGTT | + |
Preference number: 4 (lower is better) Translates to: SSQGDALSPGSKVPVLRALVARV*AGEMRV Trigger: AACCCTCATCTCCCCAGCCCAGACCCTGGCCACCAA...GGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | ATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATTGGTGGCCAGGGTCTaGGCTGGGGAGATGAGGGTT | + |
Preference number: 4 (lower is better) Translates to: IPGRCAFSWVQGASAPSRLVARV*AGEMRV Trigger: AACCCTCATCTCCCCAGCCCAGACCCTGGCCACCAA...TCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | GTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCTTGGTGGCCAGGGTCTaGGCTGGGGAGATGAGGGTT | + |
Preference number: 4 (lower is better) Translates to: VIPGRCAFSWVQGASAPSLVARV*AGEMRV Trigger: AACCCTCATCTCCCCAGCCCAGACCCTGGCCACCAA...GCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | AGGGGACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGAGACCCACCTTTGGTaGCCAGGGTCTGGGCTGGGG | + |
Preference number: 4 (lower is better) Translates to: RGPCCSVVMSSQGDALSPETHLW*PGSGLG Trigger: CCCCAGCCCAGACCCTGGCCACCAAAGGTGGGTCTC...AGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGTCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGAGACCCACCTTTGGTaGCCAGGGTCTGGGCTGGGG | + |
Preference number: 4 (lower is better) Translates to: MSSQGDALSPGSKVPVLRETHLW*PGSGLG Trigger: CCCCAGCCCAGACCCTGGCCACCAAAGGTGGGTCTC...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | GTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCTGGGCATGGTGTCCTTaGCCTTGCCTTTCAGGCTGC | + |
Preference number: 4 (lower is better) Translates to: VIPGRCAFSWVQGASAPSWAWCP*PCLSGC Trigger: GCAGCCTGAAAGGCAAGGTCAAGGACACCATGCCCA...GCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | AGGGGACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTTGGACGGAGTGTTCCTaGAGCTGGGGCTGGAGGCTC | + |
Preference number: 4 (lower is better) Translates to: RGPCCSVVMSSQGDALSPWTECS*SWGWRL Trigger: GAGCCTCCAGCCCCAGCTTCAGGAACACTCCGTCCA...AGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | CAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCGTCTGGGCTCTTTGTTaGGGCGCTCCTGGAACTGAG | + |
Preference number: 4 (lower is better) Translates to: QGDALSPGSKVPVLRADVVWALC*GAPGTE Trigger: CTCAGTTCCAGGAGCGCCTCAACAAAGAGCCCAGAC...GACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | TCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGTCTGGGCTCTTTGTTaGGGCGCTCCTGGAACTGAG | + |
Preference number: 4 (lower is better) Translates to: SSQGDALSPGSKVPVLRAVWALC*GAPGTE Trigger: CTCAGTTCCAGGAGCGCCTCAACAAAGAGCCCAGAC...GGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | ATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGAGCAAGGATGGTTAGCTaGCTCTGCTGCGACTCCAGC | + |
Preference number: 4 (lower is better) Translates to: IPGRCAFSWVQGASAPSRARMVS*LCCDSS Trigger: GCTGGAGTCGCAGCAGAGTCAGCTAACCATCCTTGC...TCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | CCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCCCTCGGGCCTGGAGTTaGAATCCTCCACCAGGGACT | + |
Preference number: 4 (lower is better) Translates to: PCCSVVMSSQGDALSPGSPRAWS*NPPPGT Trigger: AGTCCCTGGTGGAGGATTTCAACTCCAGGCCCGAGG...GGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | ATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGACACCTGCTCACTCACTaGCTGCATCACTTCCTCGGG | + |
Preference number: 4 (lower is better) Translates to: IPGRCAFSWVQGASAPSRHLLTH*LHHFLG Trigger: CCCGAGGAAGTGATGCAGTCAGTGAGTGAGCAGGTG...TCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | GTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCACCTGCTCACTCACTaGCTGCATCACTTCCTCGGG | + |
Preference number: 4 (lower is better) Translates to: VIPGRCAFSWVQGASAPSHLLTH*LHHFLG Trigger: CCCGAGGAAGTGATGCAGTCAGTGAGTGAGCAGGTG...GCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR GCA 90 bp | CCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGGAGCTGGAGCAGTCCTaGAAGTCAGAGGAACTGGCA | + |
Preference number: 4 (lower is better) Translates to: PREMRFLLGPRCQCSEPMELEQS*KSEELA Trigger: TGCCAGTTCCTCTGACTTGCAGGACTGCTCCAGCTC...CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGATCTGTCCCAAGACCTaGAAGATCCCCCTCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: PREMRFLLGPRCQCSEPMICPKT*KIPLSS Trigger: GCTGCTGAGGGGGATCTTCCAGGTCTTGGGACAGAT...CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | AGGGGACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGACATCACTGGGAGATaGGCCGGCCGAGCTGGAGCA | + |
Preference number: 4 (lower is better) Translates to: RGPCCSVVMSSQGDALSPDITGR*AGRAGA Trigger: TGCTCCAGCTCGGCCGGCCCATCTCCCAGTGATGTC...AGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTTCTTGGCAATGTTCTaGAGCTGGCCCACCAGGGAC | + |
Preference number: 4 (lower is better) Translates to: PREMRFLLGPRCQCSEPMFLAMF*SWPTRD Trigger: GTCCCTGGTGGGCCAGCTCCAGAACATTGCCAAGAA...CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGAGGCTGACAAACTTCTaGCCCAGTTCCGCCAGCTCA | + |
Preference number: 4 (lower is better) Translates to: PREMRFLLGPRCQCSEPMRLTNF*PSSASS Trigger: TGAGCTGGCGGAACTGGGCCAGAAGTTTGTCAGCCT...CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCTTGGTGGCCAGGGTCTaGGCTGGGGAGATGAGGGTT | + |
Preference number: 4 (lower is better) Translates to: PCCSVVMSSQGDALSPGSLVARV*AGEMRV Trigger: AACCCTCATCTCCCCAGCCCAGACCCTGGCCACCAA...GGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | TGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGAGACCCACCTTTGGTaGCCAGGGTCTGGGCTGGGG | + |
Preference number: 4 (lower is better) Translates to: CCSVVMSSQGDALSPGSKETHLW*PGSGLG Trigger: CCCCAGCCCAGACCCTGGCCACCAAAGGTGGGTCTC...CTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGAGACCCACCTTTGGTaGCCAGGGTCTGGGCTGGGG | + |
Preference number: 4 (lower is better) Translates to: LLLSGDVIPGRCAFSWVQETHLW*PGSGLG Trigger: CCCCAGCCCAGACCCTGGCCACCAAAGGTGGGTCTC...TTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGATGCAGTCCCCGCACTTaGGGGACCCTGCCTCAAGCA | + |
Preference number: 4 (lower is better) Translates to: MSSQGDALSPGSKVPVLRCSPRT*GTLPQA Trigger: TGCTTGAGGCAGGGTCCCCCAAGTGCGGGGACTGCA...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233615.2 |
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CDS-3UTR TCA 90 bp | CCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCTGGGCATGGTGTCCTTaGCCTTGCCTTTCAGGCTGC | + |
Preference number: 4 (lower is better) Translates to: PCCSVVMSSQGDALSPGSWAWCP*PCLSGC Trigger: GCAGCCTGAAAGGCAAGGTCAAGGACACCATGCCCA...GGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | CTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAATGGACGGAGTGTTCCTaGAGCTGGGGCTGGAGGCTC | + |
Preference number: 4 (lower is better) Translates to: LLLSGDVIPGRCAFSWVQWTECS*SWGWRL Trigger: GAGCCTCCAGCCCCAGCTTCAGGAACACTCCGTCCA...TTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | CCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGACTTCGTGGTGTGGTTaGGGAGTCTGGGCTCTTTGT | + |
Preference number: 4 (lower is better) Translates to: PREMRFLLGPRCQCSEPMTSWCG*GVWALC Trigger: ACAAAGAGCCCAGACTCCTCAACCACACCACGAAGT...CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | CCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCTCAGGGTCCCAGGTaGGAAGGTTCAGGAATCCTT | + |
Preference number: 4 (lower is better) Translates to: PREMRFLLGPRCQCSEPMSQGPR*EGSGIL Trigger: AAGGATTCCTGAACCTTCTCACCTGGGACCCTGAGA...CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | CCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCGCAAGGATGGTTAGCTaGCTCTGCTGCGACTCCAGC | + |
Preference number: 4 (lower is better) Translates to: PCCSVVMSSQGDALSPGSARMVS*LCCDSS Trigger: GCTGGAGTCGCAGCAGAGTCAGCTAACCATCCTTGC...GGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | CCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGAACACCTGCTGGTTGTaGTGGGTCAGGCTGACAAAC | + |
Preference number: 4 (lower is better) Translates to: PREMRFLLGPRCQCSEPMNTCWL*WVRLTN Trigger: GTTTGTCAGCCTGACCCATCACAACCAGCAGGTGTT...CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR GCA 90 bp | CTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAATTCTTCAGGCGGCTCTaGCGTGGCAGCAGCAGGGAC | + |
Preference number: 4 (lower is better) Translates to: LLLSGDVIPGRCAFSWVQFFRRL*RGSSRD Trigger: GTCCCTGCTGCTGCCACGGCAGAGCCGCCTGAAGAA...TTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR GCA 90 bp | TGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGTTCTTCAGGCGGCTCTaGCGTGGCAGCAGCAGGGAC | + |
Preference number: 4 (lower is better) Translates to: CCSVVMSSQGDALSPGSKFFRRL*RGSSRD Trigger: GTCCCTGCTGCTGCCACGGCAGAGCCGCCTGAAGAA...CTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR GCA 90 bp | ATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGAGAGCTGGAGCAGTCCTaGAAGTCAGAGGAACTGGCA | + |
Preference number: 4 (lower is better) Translates to: IPGRCAFSWVQGASAPSRELEQS*KSEELA Trigger: TGCCAGTTCCTCTGACTTGCAGGACTGCTCCAGCTC...TCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | GTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCATCTGTCCCAAGACCTaGAAGATCCCCCTCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: VIPGRCAFSWVQGASAPSICPKT*KIPLSS Trigger: GCTGCTGAGGGGGATCTTCCAGGTCTTGGGACAGAT...GCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | ATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGAATCTGTCCCAAGACCTaGAAGATCCCCCTCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: IPGRCAFSWVQGASAPSRICPKT*KIPLSS Trigger: GCTGCTGAGGGGGATCTTCCAGGTCTTGGGACAGAT...TCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCATCTGTCCCAAGACCTaGAAGATCCCCCTCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: QGDALSPGSKVPVLRADVICPKT*KIPLSS Trigger: GCTGCTGAGGGGGATCTTCCAGGTCTTGGGACAGAT...GACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | TCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCAGCCACTTCGTGGTGTaGTTGAGGAGTCTGGGCTCT | + |
Preference number: 4 (lower is better) Translates to: SSQGDALSPGSKVPVLRASHFVV*LRSLGS Trigger: AGAGCCCAGACTCCTCAACCACACCACGAAGTGGCT...GGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | TGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGATGGGCCGGCCGAGCTaGAGCAGTCCTGCAAGTCAG | + |
Preference number: 4 (lower is better) Translates to: CCSVVMSSQGDALSPGSKMGRPS*SSPASQ Trigger: CTGACTTGCAGGACTGCTCCAGCTCGGCCGGCCCAT...CTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGACATCACTGGGAGATaGGCCGGCCGAGCTGGAGCA | + |
Preference number: 4 (lower is better) Translates to: LLLSGDVIPGRCAFSWVQDITGR*AGRAGA Trigger: TGCTCCAGCTCGGCCGGCCCATCTCCCAGTGATGTC...TTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTGTCAGAGAAGCTACTaGCCACCAGCAAGACAGAGG | + |
Preference number: 4 (lower is better) Translates to: PREMRFLLGPRCQCSEPMCQRSY*PPARQR Trigger: CCTCTGTCTTGCTGGTGGCCAGTAGCTTCTCTGACA...CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | GTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCTTCTTGGCAATGTTCTaGAGCTGGCCCACCAGGGAC | + |
Preference number: 4 (lower is better) Translates to: VIPGRCAFSWVQGASAPSFLAMF*SWPTRD Trigger: GTCCCTGGTGGGCCAGCTCCAGAACATTGCCAAGAA...GCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | ATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGAAGGCTGACAAACTTCTaGCCCAGTTCCGCCAGCTCA | + |
Preference number: 4 (lower is better) Translates to: IPGRCAFSWVQGASAPSRRLTNF*PSSASS Trigger: TGAGCTGGCGGAACTGGGCCAGAAGTTTGTCAGCCT...TCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGATGGGCATGGTGTCCTTaGCCTTGCCTTTCAGGCTGC | + |
Preference number: 4 (lower is better) Translates to: MSSQGDALSPGSKVPVLRWAWCP*PCLSGC Trigger: GCAGCCTGAAAGGCAAGGTCAAGGACACCATGCCCA...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | AGGGGACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTTGGGCATGGTGTCCTTaGCCTTGCCTTTCAGGCTGC | + |
Preference number: 4 (lower is better) Translates to: RGPCCSVVMSSQGDALSPWAWCP*PCLSGC Trigger: GCAGCCTGAAAGGCAAGGTCAAGGACACCATGCCCA...AGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGTCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | AGGGGACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGTCTGGGCTCTTTGTTaGGGCGCTCCTGGAACTGAG | + |
Preference number: 4 (lower is better) Translates to: RGPCCSVVMSSQGDALSPVWALC*GAPGTE Trigger: CTCAGTTCCAGGAGCGCCTCAACAAAGAGCCCAGAC...AGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGTCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | GTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCACTTCGTGGTGTGGTTaGGGAGTCTGGGCTCTTTGT | + |
Preference number: 4 (lower is better) Translates to: VIPGRCAFSWVQGASAPSTSWCG*GVWALC Trigger: ACAAAGAGCCCAGACTCCTCAACCACACCACGAAGT...GCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | CAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCTCTCAGGGTCCCAGGTaGGAAGGTTCAGGAATCCTT | + |
Preference number: 4 (lower is better) Translates to: QGDALSPGSKVPVLRADVSQGPR*EGSGIL Trigger: AAGGATTCCTGAACCTTCTCACCTGGGACCCTGAGA...GACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | TCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCTCTCAGGGTCCCAGGTaGGAAGGTTCAGGAATCCTT | + |
Preference number: 4 (lower is better) Translates to: SSQGDALSPGSKVPVLRASQGPR*EGSGIL Trigger: AAGGATTCCTGAACCTTCTCACCTGGGACCCTGAGA...GGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | GTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCTCTCAGGGTCCCAGGTaGGAAGGTTCAGGAATCCTT | + |
Preference number: 4 (lower is better) Translates to: VIPGRCAFSWVQGASAPSSQGPR*EGSGIL Trigger: AAGGATTCCTGAACCTTCTCACCTGGGACCCTGAGA...GCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCAAGGATGGTTAGCTaGCTCTGCTGCGACTCCAGC | + |
Preference number: 4 (lower is better) Translates to: MSSQGDALSPGSKVPVLRARMVS*LCCDSS Trigger: GCTGGAGTCGCAGCAGAGTCAGCTAACCATCCTTGC...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | AGGGGACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTCACCTGCTCACTCACTaGCTGCATCACTTCCTCGGG | + |
Preference number: 4 (lower is better) Translates to: RGPCCSVVMSSQGDALSPHLLTH*LHHFLG Trigger: CCCGAGGAAGTGATGCAGTCAGTGAGTGAGCAGGTG...AGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGTCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | GTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCAACACCTGCTGGTTGTaGTGGGTCAGGCTGACAAAC | + |
Preference number: 4 (lower is better) Translates to: VIPGRCAFSWVQGASAPSNTCWL*WVRLTN Trigger: GTTTGTCAGCCTGACCCATCACAACCAGCAGGTGTT...GCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | ATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGAAACACCTGCTGGTTGTaGTGGGTCAGGCTGACAAAC | + |
Preference number: 4 (lower is better) Translates to: IPGRCAFSWVQGASAPSRNTCWL*WVRLTN Trigger: GTTTGTCAGCCTGACCCATCACAACCAGCAGGTGTT...TCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | CAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCAACACCTGCTGGTTGTaGTGGGTCAGGCTGACAAAC | + |
Preference number: 4 (lower is better) Translates to: QGDALSPGSKVPVLRADVNTCWL*WVRLTN Trigger: GTTTGTCAGCCTGACCCATCACAACCAGCAGGTGTT...GACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGATTGTGCGGGAGCATTTaGAACGAGGGGGAGGGAGGT | + |
Preference number: 4 (lower is better) Translates to: MSSQGDALSPGSKVPVLRLCGSI*NEGEGG Trigger: ACCTCCCTCCCCCTCGTTTCAAATGCTCCCGCACAA...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233615.2 |
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CDS-3UTR GCA 90 bp | CCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCGAGCTGGAGCAGTCCTaGAAGTCAGAGGAACTGGCA | + |
Preference number: 4 (lower is better) Translates to: PCCSVVMSSQGDALSPGSELEQS*KSEELA Trigger: TGCCAGTTCCTCTGACTTGCAGGACTGCTCCAGCTC...GGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR GCA 90 bp | TCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCACTTCCTCCACCACCTaGTCACTCACTGACTGCATC | + |
Preference number: 4 (lower is better) Translates to: SSQGDALSPGSKVPVLRATSSTT*SLTDCI Trigger: GATGCAGTCAGTGAGTGAGCAGGTGGTGGAGGAAGT...GGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAGCCACTTCGTGGTGTaGTTGAGGAGTCTGGGCTCT | + |
Preference number: 4 (lower is better) Translates to: PCCSVVMSSQGDALSPGSSHFVV*LRSLGS Trigger: AGAGCCCAGACTCCTCAACCACACCACGAAGTGGCT...GGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | ATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCAGAGAAGCTACTaGCCACCAGCAAGACAGAGG | + |
Preference number: 4 (lower is better) Translates to: IPGRCAFSWVQGASAPSRCQRSY*PPARQR Trigger: CCTCTGTCTTGCTGGTGGCCAGTAGCTTCTCTGACA...TCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCTGTCAGAGAAGCTACTaGCCACCAGCAAGACAGAGG | + |
Preference number: 4 (lower is better) Translates to: QGDALSPGSKVPVLRADVCQRSY*PPARQR Trigger: CCTCTGTCTTGCTGGTGGCCAGTAGCTTCTCTGACA...GACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAATTGGTGGCCAGGGTCTaGGCTGGGGAGATGAGGGTT | + |
Preference number: 4 (lower is better) Translates to: LLLSGDVIPGRCAFSWVQLVARV*AGEMRV Trigger: AACCCTCATCTCCCCAGCCCAGACCCTGGCCACCAA...TTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | TGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGTGGGCATGGTGTCCTTaGCCTTGCCTTTCAGGCTGC | + |
Preference number: 4 (lower is better) Translates to: CCSVVMSSQGDALSPGSKWAWCP*PCLSGC Trigger: GCAGCCTGAAAGGCAAGGTCAAGGACACCATGCCCA...CTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | TGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTCTGGGCTCTTTGTTaGGGCGCTCCTGGAACTGAG | + |
Preference number: 4 (lower is better) Translates to: CCSVVMSSQGDALSPGSKVWALC*GAPGTE Trigger: CTCAGTTCCAGGAGCGCCTCAACAAAGAGCCCAGAC...CTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | TGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGCAAGGATGGTTAGCTaGCTCTGCTGCGACTCCAGC | + |
Preference number: 4 (lower is better) Translates to: CCSVVMSSQGDALSPGSKARMVS*LCCDSS Trigger: GCTGGAGTCGCAGCAGAGTCAGCTAACCATCCTTGC...CTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR GCA 90 bp | AGGGGACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGAGCTGGAGCAGTCCTaGAAGTCAGAGGAACTGGCA | + |
Preference number: 4 (lower is better) Translates to: RGPCCSVVMSSQGDALSPELEQS*KSEELA Trigger: TGCCAGTTCCTCTGACTTGCAGGACTGCTCCAGCTC...AGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR GCA 90 bp | CCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCACTTCCTCCACCACCTaGTCACTCACTGACTGCATC | + |
Preference number: 4 (lower is better) Translates to: PCCSVVMSSQGDALSPGSTSSTT*SLTDCI Trigger: GATGCAGTCAGTGAGTGAGCAGGTGGTGGAGGAAGT...GGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAAGCCACTTCGTGGTGTaGTTGAGGAGTCTGGGCTCT | + |
Preference number: 4 (lower is better) Translates to: MSSQGDALSPGSKVPVLRSHFVV*LRSLGS Trigger: AGAGCCCAGACTCCTCAACCACACCACGAAGTGGCT...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGATTCTTGGCAATGTTCTaGAGCTGGCCCACCAGGGAC | + |
Preference number: 4 (lower is better) Translates to: MSSQGDALSPGSKVPVLRFLAMF*SWPTRD Trigger: GTCCCTGGTGGGCCAGCTCCAGAACATTGCCAAGAA...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | AGGGGACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTTTCTTGGCAATGTTCTaGAGCTGGCCCACCAGGGAC | + |
Preference number: 4 (lower is better) Translates to: RGPCCSVVMSSQGDALSPFLAMF*SWPTRD Trigger: GTCCCTGGTGGGCCAGCTCCAGAACATTGCCAAGAA...AGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAAGGCTGACAAACTTCTaGCCCAGTTCCGCCAGCTCA | + |
Preference number: 4 (lower is better) Translates to: MSSQGDALSPGSKVPVLRRLTNF*PSSASS Trigger: TGAGCTGGCGGAACTGGGCCAGAAGTTTGTCAGCCT...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | GATCTCGGTGTAATACGGGGCAAACACCTGCTGGTTGTGATGGGTCAGGCTGACGTCTGGGCTCTTTGTTaGGGCGCTCCTGGAACTGAG | + |
Preference number: 4 (lower is better) Translates to: DLGVIRGKHLLVVMGQADVWALC*GAPGTE Trigger: CTCAGTTCCAGGAGCGCCTCAACAAAGAGCCCAGAC...GTCAGCCTGACCCATCACAACCAGCAGGTGTTTGCCCCGTATTACACCGAGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233665.2 |
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CDS-3UTR TCA 90 bp | AGGGGACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTACTTCGTGGTGTGGTTaGGGAGTCTGGGCTCTTTGT | + |
Preference number: 4 (lower is better) Translates to: RGPCCSVVMSSQGDALSPTSWCG*GVWALC Trigger: ACAAAGAGCCCAGACTCCTCAACCACACCACGAAGT...AGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAACTTCGTGGTGTGGTTaGGGAGTCTGGGCTCTTTGT | + |
Preference number: 4 (lower is better) Translates to: MSSQGDALSPGSKVPVLRTSWCG*GVWALC Trigger: ACAAAGAGCCCAGACTCCTCAACCACACCACGAAGT...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | CAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCGGACAAAGCAGCACTTaGGGAACAAGTGTATACGCT | + |
Preference number: 4 (lower is better) Translates to: QGDALSPGSKVPVLRADVGQSST*GTSVYA Trigger: AGCGTATACACTTGTTCCTCAAGTGCTGCTTTGTCC...GACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAAACACCTGCTGGTTGTaGTGGGTCAGGCTGACAAAC | + |
Preference number: 4 (lower is better) Translates to: MSSQGDALSPGSKVPVLRNTCWL*WVRLTN Trigger: GTTTGTCAGCCTGACCCATCACAACCAGCAGGTGTT...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR GCA 90 bp | TGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGAGCTGGAGCAGTCCTaGAAGTCAGAGGAACTGGCA | + |
Preference number: 4 (lower is better) Translates to: CCSVVMSSQGDALSPGSKELEQS*KSEELA Trigger: TGCCAGTTCCTCTGACTTGCAGGACTGCTCCAGCTC...CTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR GCA 90 bp | AGGGGACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTACTTCCTCCACCACCTaGTCACTCACTGACTGCATC | + |
Preference number: 4 (lower is better) Translates to: RGPCCSVVMSSQGDALSPTSSTT*SLTDCI Trigger: GATGCAGTCAGTGAGTGAGCAGGTGGTGGAGGAAGT...AGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAAGCCACTTCGTGGTGTaGTTGAGGAGTCTGGGCTCT | + |
Preference number: 4 (lower is better) Translates to: LLLSGDVIPGRCAFSWVQSHFVV*LRSLGS Trigger: AGAGCCCAGACTCCTCAACCACACCACGAAGTGGCT...TTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | TGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGAGCCACTTCGTGGTGTaGTTGAGGAGTCTGGGCTCT | + |
Preference number: 4 (lower is better) Translates to: CCSVVMSSQGDALSPGSKSHFVV*LRSLGS Trigger: AGAGCCCAGACTCCTCAACCACACCACGAAGTGGCT...CTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGATGTCAGAGAAGCTACTaGCCACCAGCAAGACAGAGG | + |
Preference number: 4 (lower is better) Translates to: MSSQGDALSPGSKVPVLRCQRSY*PPARQR Trigger: CCTCTGTCTTGCTGGTGGCCAGTAGCTTCTCTGACA...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | CTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAATTCTTGGCAATGTTCTaGAGCTGGCCCACCAGGGAC | + |
Preference number: 4 (lower is better) Translates to: LLLSGDVIPGRCAFSWVQFLAMF*SWPTRD Trigger: GTCCCTGGTGGGCCAGCTCCAGAACATTGCCAAGAA...TTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | TGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGACTTCGTGGTGTGGTTaGGGAGTCTGGGCTCTTTGT | + |
Preference number: 4 (lower is better) Translates to: CCSVVMSSQGDALSPGSKTSWCG*GVWALC Trigger: ACAAAGAGCCCAGACTCCTCAACCACACCACGAAGT...CTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | TGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGTCTCAGGGTCCCAGGTaGGAAGGTTCAGGAATCCTT | + |
Preference number: 4 (lower is better) Translates to: CCSVVMSSQGDALSPGSKSQGPR*EGSGIL Trigger: AAGGATTCCTGAACCTTCTCACCTGGGACCCTGAGA...CTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR GCA 90 bp | CTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAACTTCCTCCACCACCTaGTCACTCACTGACTGCATC | + |
Preference number: 4 (lower is better) Translates to: LLLSGDVIPGRCAFSWVQTSSTT*SLTDCI Trigger: GATGCAGTCAGTGAGTGAGCAGGTGGTGGAGGAAGT...TTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | TCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCACAACAGGATCTCTTTaGTCTCCTTCAGAAGCTCAA | + |
Preference number: 4 (lower is better) Translates to: SSQGDALSPGSKVPVLRATTGSL*SPSEAQ Trigger: TTGAGCTTCTGAAGGAGATCAAAGAGATCCTGTTGT...GGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | AGGGGACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGACAAAGCAGCACTTaGGGAACAAGTGTATACGCT | + |
Preference number: 4 (lower is better) Translates to: RGPCCSVVMSSQGDALSPGQSST*GTSVYA Trigger: AGCGTATACACTTGTTCCTCAAGTGCTGCTTTGTCC...AGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGGACAAAGCAGCACTTaGGGAACAAGTGTATACGCT | + |
Preference number: 4 (lower is better) Translates to: MSSQGDALSPGSKVPVLRGQSST*GTSVYA Trigger: AGCGTATACACTTGTTCCTCAAGTGCTGCTTTGTCC...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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3UTR CAA 72 bp | CTCTGCCGTGGCAGCAGCAGGGACAACAGGATCTCTTaGATCTCCTTCAGAAGCTCAAGAGCACAGCTGAAG | + |
Preference number: 4 (lower is better) Translates to: LCRGSSRDNRIS*ISFRSSRAQLK Trigger: CTTCAGCTGTGCTCTTGAGCTTCTGAAGGAGATCAAAGAGATCCTGTTGTCCCTGCTGCTGCCACGGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233009.2 ENSMUST00000233615.2 |
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CDS-3UTR TCA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAACAACAGGATCTCTTTaGTCTCCTTCAGAAGCTCAA | + |
Preference number: 4 (lower is better) Translates to: MSSQGDALSPGSKVPVLRTTGSL*SPSEAQ Trigger: TTGAGCTTCTGAAGGAGATCAAAGAGATCCTGTTGT...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | ACAAGTTTATTATGGAGCGGGTTTGGGCCAGTTGTTGACATGTTTGTCTTGTTATGGCAGAGGGGGCAATaGGCTGTGTGGCCGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: TSLLWSGFGPVVDMFVLLWQRGQ*AVWPPG Trigger: CCCAGGCGGCCACACAGCTCATTGCCCCCTCTGCCA...TAACAAGACAAACATGTCAACAACTGGCCCAAACCCGCTCCATAATAAACTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | CTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAACAACAGGATCTCTTTaGTCTCCTTCAGAAGCTCAA | + |
Preference number: 4 (lower is better) Translates to: LLLSGDVIPGRCAFSWVQTTGSL*SPSEAQ Trigger: TTGAGCTTCTGAAGGAGATCAAAGAGATCCTGTTGT...TTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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3UTR CAA 72 bp | TCACTCACTGACTGCATCACTTCCTCGGGCCTGGAGTaGAAATCCTCCACCAGGGACTTCGTGATTTGTTTC | + |
Preference number: 4 (lower is better) Translates to: SLTDCITSSGLE*KSSTRDFVICF Trigger: GAAACAAATCACGAAGTCCCTGGTGGAGGATTTCAACTCCAGGCCCGAGGAAGTGATGCAGTCAGTGAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000232728.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 |
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CDS-3UTR TCA 90 bp | ACAAGTTTATTATGGAGCGGGTTTGGGCCAGTTGTTGACATGTTTGTCTTGTTATGGACGGAGTGTTCCTaGAGCTGGGGCTGGAGGCTC | + |
Preference number: 4 (lower is better) Translates to: TSLLWSGFGPVVDMFVLLWTECS*SWGWRL Trigger: GAGCCTCCAGCCCCAGCTTCAGGAACACTCCGTCCA...TAACAAGACAAACATGTCAACAACTGGCCCAAACCCGCTCCATAATAAACTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | ACAAGTTTATTATGGAGCGGGTTTGGGCCAGTTGTTGACATGTTTGTCTTGTTACCTCGGGCCTGGAGTTaGAATCCTCCACCAGGGACT | + |
Preference number: 4 (lower is better) Translates to: TSLLWSGFGPVVDMFVLLPRAWS*NPPPGT Trigger: AGTCCCTGGTGGAGGATTTCAACTCCAGGCCCGAGG...TAACAAGACAAACATGTCAACAACTGGCCCAAACCCGCTCCATAATAAACTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR GCA 90 bp | GATCTCGGTGTAATACGGGGCAAACACCTGCTGGTTGTGATGGGTCAGGCTGACAGGGACAACAGGATCTaGTTGAAGATAAACTCCTTT | + |
Preference number: 4 (lower is better) Translates to: DLGVIRGKHLLVVMGQADRDNRI*LKINSF Trigger: AAAGGAGTTTATCTTCAAGCAGATCCTGTTGTCCCT...GTCAGCCTGACCCATCACAACCAGCAGGTGTTTGCCCCGTATTACACCGAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232728.2 |
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CDS-3UTR TCA 90 bp | ACAAGTTTATTATGGAGCGGGTTTGGGCCAGTTGTTGACATGTTTGTCTTGTTAGTCTGGGCTCTTTGTTaGGGCGCTCCTGGAACTGAG | + |
Preference number: 4 (lower is better) Translates to: TSLLWSGFGPVVDMFVLLVWALC*GAPGTE Trigger: CTCAGTTCCAGGAGCGCCTCAACAAAGAGCCCAGAC...TAACAAGACAAACATGTCAACAACTGGCCCAAACCCGCTCCATAATAAACTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | ACAAGTTTATTATGGAGCGGGTTTGGGCCAGTTGTTGACATGTTTGTCTTGTTACACCTGCTCACTCACTaGCTGCATCACTTCCTCGGG | + |
Preference number: 4 (lower is better) Translates to: TSLLWSGFGPVVDMFVLLHLLTH*LHHFLG Trigger: CCCGAGGAAGTGATGCAGTCAGTGAGTGAGCAGGTG...TAACAAGACAAACATGTCAACAACTGGCCCAAACCCGCTCCATAATAAACTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR GCA 90 bp | ACAAGTTTATTATGGAGCGGGTTTGGGCCAGTTGTTGACATGTTTGTCTTGTTAGAGCTGGAGCAGTCCTaGAAGTCAGAGGAACTGGCA | + |
Preference number: 4 (lower is better) Translates to: TSLLWSGFGPVVDMFVLLELEQS*KSEELA Trigger: TGCCAGTTCCTCTGACTTGCAGGACTGCTCCAGCTC...TAACAAGACAAACATGTCAACAACTGGCCCAAACCCGCTCCATAATAAACTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | ACAAGTTTATTATGGAGCGGGTTTGGGCCAGTTGTTGACATGTTTGTCTTGTTAATCTGTCCCAAGACCTaGAAGATCCCCCTCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: TSLLWSGFGPVVDMFVLLICPKT*KIPLSS Trigger: GCTGCTGAGGGGGATCTTCCAGGTCTTGGGACAGAT...TAACAAGACAAACATGTCAACAACTGGCCCAAACCCGCTCCATAATAAACTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CCA 90 bp | ACAAGTTTATTATGGAGCGGGTTTGGGCCAGTTGTTGACATGTTTGTCTTGTTAAGCCACTTCGTGGTGTaGTTGAGGAGTCTGGGCTCT | + |
Preference number: 4 (lower is better) Translates to: TSLLWSGFGPVVDMFVLLSHFVV*LRSLGS Trigger: AGAGCCCAGACTCCTCAACCACACCACGAAGTGGCT...TAACAAGACAAACATGTCAACAACTGGCCCAAACCCGCTCCATAATAAACTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
||
3UTR CAA 72 bp | TCACAAGTTTATTATGGAGCGGGTTTGGGCCAGTTGTaGACATGTTTGTCTTGTTACAGCCCTGGTGTGCTG | + |
Preference number: 4 (lower is better) Translates to: SQVYYGAGLGQL*TCLSCYSPGVL Trigger: CAGCACACCAGGGCTGTAACAAGACAAACATGTCAACAACTGGCCCAAACCCGCTCCATAATAAACTTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232728.2 ENSMUST00000232798.2 ENSMUST00000233009.2 ENSMUST00000233615.2 ENSMUST00000233665.2 ENSMUST00000233898.2 |
||
CDS-3UTR TCA 90 bp | ACAAGTTTATTATGGAGCGGGTTTGGGCCAGTTGTTGACATGTTTGTCTTGTTATCTCAGGGTCCCAGGTaGGAAGGTTCAGGAATCCTT | + |
Preference number: 4 (lower is better) Translates to: TSLLWSGFGPVVDMFVLLSQGPR*EGSGIL Trigger: AAGGATTCCTGAACCTTCTCACCTGGGACCCTGAGA...TAACAAGACAAACATGTCAACAACTGGCCCAAACCCGCTCCATAATAAACTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR GCA 90 bp | ACAAGTTTATTATGGAGCGGGTTTGGGCCAGTTGTTGACATGTTTGTCTTGTTAACTTCCTCCACCACCTaGTCACTCACTGACTGCATC | + |
Preference number: 4 (lower is better) Translates to: TSLLWSGFGPVVDMFVLLTSSTT*SLTDCI Trigger: GATGCAGTCAGTGAGTGAGCAGGTGGTGGAGGAAGT...TAACAAGACAAACATGTCAACAACTGGCCCAAACCCGCTCCATAATAAACTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR TCA 90 bp | ACAAGTTTATTATGGAGCGGGTTTGGGCCAGTTGTTGACATGTTTGTCTTGTTAGGACAAAGCAGCACTTaGGGAACAAGTGTATACGCT | + |
Preference number: 4 (lower is better) Translates to: TSLLWSGFGPVVDMFVLLGQSST*GTSVYA Trigger: AGCGTATACACTTGTTCCTCAAGTGCTGCTTTGTCC...TAACAAGACAAACATGTCAACAACTGGCCCAAACCCGCTCCATAATAAACTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS GCA 90 bp | TCAAGCTTGGAAGCGTCATGGACTCTCTCCGTCATACCTAGCCTGTaGGAGCTCGGGGTCCCGCCGAGGTGGCCCTTTCCCGGGGATGGC | + |
Preference number: 5 (lower is better) Translates to: SSLEASWTLSVIPSL*ELGVPPRWPFPGDG Trigger: GCCATCCCCGGGAAAGGGCCACCTCGGCGGGACCCCGAGCTCGCACAGGCTAGGTATGACGGAGAGAGTCCATGACGCTTCCAAGCTTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042692.13 ENSMUST00000129046.9 |
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CDS-3UTR CAA 90 bp | CCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGCAGAGAGACCCACCTTaGGTGGCCAGGGTCTGGGCT | + |
Preference number: 5 (lower is better) Translates to: PREMRFLLGPRCQCSEPMQRDPP*VARVWA Trigger: AGCCCAGACCCTGGCCACCAAAGGTGGGTCTCTCTG...CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | ATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGACAGAGAGACCCACCTTaGGTGGCCAGGGTCTGGGCT | + |
Preference number: 5 (lower is better) Translates to: IPGRCAFSWVQGASAPSRQRDPP*VARVWA Trigger: AGCCCAGACCCTGGCCACCAAAGGTGGGTCTCTCTG...TCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | TCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCCAGAGAGACCCACCTTaGGTGGCCAGGGTCTGGGCT | + |
Preference number: 5 (lower is better) Translates to: SSQGDALSPGSKVPVLRAQRDPP*VARVWA Trigger: AGCCCAGACCCTGGCCACCAAAGGTGGGTCTCTCTG...GGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS TCA 90 bp | ACTGGGAGATGGGCCGGCCGAGCTGGAGCAGTCTGGGCTCTTTGTTaGGGCGCTCCTGGAACTGAGCCCGCTCAAACTGGACGGAGTGTT | + |
Preference number: 5 (lower is better) Translates to: TGRWAGRAGAVWALC*GAPGTEPAQTGRSV Trigger: AACACTCCGTCCAGTTTGAGCGGGCTCAGTTCCAGGAGCGCCTCAACAAAGAGCCCAGACTGCTCCAGCTCGGCCGGCCCATCTCCCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233665.2 |
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CDS-3UTR CAA 90 bp | CCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCCAGAGAGACCCACCTTaGGTGGCCAGGGTCTGGGCT | + |
Preference number: 5 (lower is better) Translates to: PCCSVVMSSQGDALSPGSQRDPP*VARVWA Trigger: AGCCCAGACCCTGGCCACCAAAGGTGGGTCTCTCTG...GGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | ATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGACTGGGCATGGTGTCCTaGACCTTGCCTTTCAGGCTG | + |
Preference number: 5 (lower is better) Translates to: IPGRCAFSWVQGASAPSRLGMVS*TLPFRL Trigger: CAGCCTGAAAGGCAAGGTCAAGGACACCATGCCCAG...TCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | CCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGCACTTCGTGGTGTGGTaGAGGAGTCTGGGCTCTTTG | + |
Preference number: 5 (lower is better) Translates to: PREMRFLLGPRCQCSEPMHFVVW*RSLGSL Trigger: CAAAGAGCCCAGACTCCTCAACCACACCACGAAGTG...CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | GTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCAAGGTTCAGGAATCCTaGAGACAGCACCATCGCGGG | + |
Preference number: 5 (lower is better) Translates to: VIPGRCAFSWVQGASAPSKVQES*RQHHRG Trigger: CCCGCGATGGTGCTGTCTCAAGGATTCCTGAACCTT...GCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | CCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCCACTTCGTGGTGTGGTaGAGGAGTCTGGGCTCTTTG | + |
Preference number: 5 (lower is better) Translates to: PCCSVVMSSQGDALSPGSHFVVW*RSLGSL Trigger: CAAAGAGCCCAGACTCCTCAACCACACCACGAAGTG...GGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | CTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAACTGGGCATGGTGTCCTaGACCTTGCCTTTCAGGCTG | + |
Preference number: 5 (lower is better) Translates to: LLLSGDVIPGRCAFSWVQLGMVS*TLPFRL Trigger: CAGCCTGAAAGGCAAGGTCAAGGACACCATGCCCAG...TTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | TGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGCTGGGCATGGTGTCCTaGACCTTGCCTTTCAGGCTG | + |
Preference number: 5 (lower is better) Translates to: CCSVVMSSQGDALSPGSKLGMVS*TLPFRL Trigger: CAGCCTGAAAGGCAAGGTCAAGGACACCATGCCCAG...CTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | AGGGGACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTCACTTCGTGGTGTGGTaGAGGAGTCTGGGCTCTTTG | + |
Preference number: 5 (lower is better) Translates to: RGPCCSVVMSSQGDALSPHFVVW*RSLGSL Trigger: CAAAGAGCCCAGACTCCTCAACCACACCACGAAGTG...AGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | AGGGGACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTAAGGTTCAGGAATCCTaGAGACAGCACCATCGCGGG | + |
Preference number: 5 (lower is better) Translates to: RGPCCSVVMSSQGDALSPKVQES*RQHHRG Trigger: CCCGCGATGGTGCTGTCTCAAGGATTCCTGAACCTT...AGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGTCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAAAGGTTCAGGAATCCTaGAGACAGCACCATCGCGGG | + |
Preference number: 5 (lower is better) Translates to: MSSQGDALSPGSKVPVLRKVQES*RQHHRG Trigger: CCCGCGATGGTGCTGTCTCAAGGATTCCTGAACCTT...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | CCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCATGGTGTCCTTGACCTaGCCTTTCAGGCTGCTTGAA | + |
Preference number: 5 (lower is better) Translates to: PCCSVVMSSQGDALSPGSMVSLT*PFRLLE Trigger: TTCAAGCAGCCTGAAAGGCAAGGTCAAGGACACCAT...GGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | CCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGGTGATTTGTTTCAGCTaGTCTACAAACTGGGGTGAG | + |
Preference number: 5 (lower is better) Translates to: PREMRFLLGPRCQCSEPMVICFS*STNWGE Trigger: CTCACCCCAGTTTGTAGACAAGCTGAAACAAATCAC...CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | TCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCAGGACAAAGCAGCACTaGAGGAACAAGTGTATACGC | + |
Preference number: 5 (lower is better) Translates to: SSQGDALSPGSKVPVLRARTKQH*RNKCIR Trigger: GCGTATACACTTGTTCCTCAAGTGCTGCTTTGTCCT...GGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | CAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCAGGACAAAGCAGCACTaGAGGAACAAGTGTATACGC | + |
Preference number: 5 (lower is better) Translates to: QGDALSPGSKVPVLRADVRTKQH*RNKCIR Trigger: GCGTATACACTTGTTCCTCAAGTGCTGCTTTGTCCT...GACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAATGGTGTCCTTGACCTaGCCTTTCAGGCTGCTTGAA | + |
Preference number: 5 (lower is better) Translates to: MSSQGDALSPGSKVPVLRMVSLT*PFRLLE Trigger: TTCAAGCAGCCTGAAAGGCAAGGTCAAGGACACCAT...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | AGGGGACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTATGGTGTCCTTGACCTaGCCTTTCAGGCTGCTTGAA | + |
Preference number: 5 (lower is better) Translates to: RGPCCSVVMSSQGDALSPMVSLT*PFRLLE Trigger: TTCAAGCAGCCTGAAAGGCAAGGTCAAGGACACCAT...AGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | CAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCGACAACAGGATCTCTTaGATCTCCTTCAGAAGCTCA | + |
Preference number: 5 (lower is better) Translates to: QGDALSPGSKVPVLRADVDNRIS*ISFRSS Trigger: TGAGCTTCTGAAGGAGATCAAAGAGATCCTGTTGTC...GACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | GTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCGACAACAGGATCTCTTaGATCTCCTTCAGAAGCTCA | + |
Preference number: 5 (lower is better) Translates to: VIPGRCAFSWVQGASAPSDNRIS*ISFRSS Trigger: TGAGCTTCTGAAGGAGATCAAAGAGATCCTGTTGTC...GCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | CCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGAACAAGACCATCATGTaGAGGATATACTTGGAGAGG | + |
Preference number: 5 (lower is better) Translates to: PREMRFLLGPRCQCSEPMNKTIM*RIYLER Trigger: CCTCTCCAAGTATATCCTCAACATGATGGTCTTGTT...CATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | CAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGTCGTGATTTGTTTCAGCTaGTCTACAAACTGGGGTGAG | + |
Preference number: 5 (lower is better) Translates to: QGDALSPGSKVPVLRADVVICFS*STNWGE Trigger: CTCACCCCAGTTTGTAGACAAGCTGAAACAAATCAC...GACATCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | TCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGTGATTTGTTTCAGCTaGTCTACAAACTGGGGTGAG | + |
Preference number: 5 (lower is better) Translates to: SSQGDALSPGSKVPVLRAVICFS*STNWGE Trigger: CTCACCCCAGTTTGTAGACAAGCTGAAACAAATCAC...GGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | TCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCTGCCTTTCAGGCTGCTaGAAGATAAACTCCTTTCTT | + |
Preference number: 5 (lower is better) Translates to: SSQGDALSPGSKVPVLRACLSGC*KINSFL Trigger: AAGAAAGGAGTTTATCTTCAAGCAGCCTGAAAGGCA...GGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | GTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCTGCCTTTCAGGCTGCTaGAAGATAAACTCCTTTCTT | + |
Preference number: 5 (lower is better) Translates to: VIPGRCAFSWVQGASAPSCLSGC*KINSFL Trigger: AAGAAAGGAGTTTATCTTCAAGCAGCCTGAAAGGCA...GCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | ATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCCGATGCCTTTCAGGCTGCTaGAAGATAAACTCCTTTCTT | + |
Preference number: 5 (lower is better) Translates to: IPGRCAFSWVQGASAPSRCLSGC*KINSFL Trigger: AAGAAAGGAGTTTATCTTCAAGCAGCCTGAAAGGCA...TCGGCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | CTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAATGGTGTCCTTGACCTaGCCTTTCAGGCTGCTTGAA | + |
Preference number: 5 (lower is better) Translates to: LLLSGDVIPGRCAFSWVQMVSLT*PFRLLE Trigger: TTCAAGCAGCCTGAAAGGCAAGGTCAAGGACACCAT...TTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | CCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCGACAACAGGATCTCTTaGATCTCCTTCAGAAGCTCA | + |
Preference number: 5 (lower is better) Translates to: PCCSVVMSSQGDALSPGSDNRIS*ISFRSS Trigger: TGAGCTTCTGAAGGAGATCAAAGAGATCCTGTTGTC...GGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | GTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGCAACAAGACCATCATGTaGAGGATATACTTGGAGAGG | + |
Preference number: 5 (lower is better) Translates to: VIPGRCAFSWVQGASAPSNKTIM*RIYLER Trigger: CCTCTCCAAGTATATCCTCAACATGATGGTCTTGTT...GCTCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | AGGGGACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTAGGACAAAGCAGCACTaGAGGAACAAGTGTATACGC | + |
Preference number: 5 (lower is better) Translates to: RGPCCSVVMSSQGDALSPRTKQH*RNKCIR Trigger: GCGTATACACTTGTTCCTCAAGTGCTGCTTTGTCCT...AGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAGACAACAGGATCTCTTaGATCTCCTTCAGAAGCTCA | + |
Preference number: 5 (lower is better) Translates to: MSSQGDALSPGSKVPVLRDNRIS*ISFRSS Trigger: TGAGCTTCTGAAGGAGATCAAAGAGATCCTGTTGTC...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | AGGGGACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGTGATTTGTTTCAGCTaGTCTACAAACTGGGGTGAG | + |
Preference number: 5 (lower is better) Translates to: RGPCCSVVMSSQGDALSPVICFS*STNWGE Trigger: CTCACCCCAGTTTGTAGACAAGCTGAAACAAATCAC...AGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGTCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | TGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGAGGACAAAGCAGCACTaGAGGAACAAGTGTATACGC | + |
Preference number: 5 (lower is better) Translates to: CCSVVMSSQGDALSPGSKRTKQH*RNKCIR Trigger: GCGTATACACTTGTTCCTCAAGTGCTGCTTTGTCCT...CTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | AGGGGACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTTGCCTTTCAGGCTGCTaGAAGATAAACTCCTTTCTT | + |
Preference number: 5 (lower is better) Translates to: RGPCCSVVMSSQGDALSPCLSGC*KINSFL Trigger: AAGAAAGGAGTTTATCTTCAAGCAGCCTGAAAGGCA...AGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGTCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | CTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGACAACAGGATCTCTTaGATCTCCTTCAGAAGCTCA | + |
Preference number: 5 (lower is better) Translates to: LLLSGDVIPGRCAFSWVQDNRIS*ISFRSS Trigger: TGAGCTTCTGAAGGAGATCAAAGAGATCCTGTTGTC...TTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | AGGGGACCCTGCTGCTCAGTGGTGATGTCATCCCAGGGAGATGCGCTTTCTCCTAACAAGACCATCATGTaGAGGATATACTTGGAGAGG | + |
Preference number: 5 (lower is better) Translates to: RGPCCSVVMSSQGDALSPNKTIM*RIYLER Trigger: CCTCTCCAAGTATATCCTCAACATGATGGTCTTGTT...AGGAGAAAGCGCATCTCCCTGGGATGACATCACCACTGAGCAGCAGGGTCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | ATGTCATCCCAGGGAGATGCGCTTTCTCCTGGGTCCAAGGTGCCAGTGCTCCGAAACAAGACCATCATGTaGAGGATATACTTGGAGAGG | + |
Preference number: 5 (lower is better) Translates to: MSSQGDALSPGSKVPVLRNKTIM*RIYLER Trigger: CCTCTCCAAGTATATCCTCAACATGATGGTCTTGTT...TCGGAGCACTGGCACCTTGGACCCAGGAGAAAGCGCATCTCCCTGGGATGACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | GGAGACATTCAGGTCTCCGCGGTCGGCTTGCTGCTGGAGGAACTCCATGTCCAGGACAACAGGATCTGCTaGAAGATAAACTCCTTTCTT | + |
Preference number: 5 (lower is better) Translates to: GDIQVSAVGLLLEELHVQDNRIC*KINSFL Trigger: AAGAAAGGAGTTTATCTTCAAGCAGATCCTGTTGTC...CTGGACATGGAGTTCCTCCAGCAGCAAGCCGACCGCGGAGACCTGAATGTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232728.2 |
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CDS-3UTR CAA 90 bp | ACAAGTTTATTATGGAGCGGGTTTGGGCCAGTTGTTGACATGTTTGTCTTGTTACTGGGCATGGTGTCCTaGACCTTGCCTTTCAGGCTG | + |
Preference number: 5 (lower is better) Translates to: TSLLWSGFGPVVDMFVLLLGMVS*TLPFRL Trigger: CAGCCTGAAAGGCAAGGTCAAGGACACCATGCCCAG...TAACAAGACAAACATGTCAACAACTGGCCCAAACCCGCTCCATAATAAACTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS TCA 90 bp | ACCTTGCCTTTCAGGCTGCTTGAAGATAAACTCCTTTCTTCCAACTaGCAATCAAGCTTGGAAGCGTCATGGACTCTCTCCGTCATACAC | + |
Preference number: 5 (lower is better) Translates to: TLPFRLLEDKLLSSN*QSSLEASWTLSVIH Trigger: GTGTATGACGGAGAGAGTCCATGACGCTTCCAAGCTTGATTGTCAGTTGGAAGAAAGGAGTTTATCTTCAAGCAGCCTGAAAGGCAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043925.16 ENSMUST00000114836.9 |
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CDS-3UTR CAA 90 bp | ACAAGTTTATTATGGAGCGGGTTTGGGCCAGTTGTTGACATGTTTGTCTTGTTACACTTCGTGGTGTGGTaGAGGAGTCTGGGCTCTTTG | + |
Preference number: 5 (lower is better) Translates to: TSLLWSGFGPVVDMFVLLHFVVW*RSLGSL Trigger: CAAAGAGCCCAGACTCCTCAACCACACCACGAAGTG...TAACAAGACAAACATGTCAACAACTGGCCCAAACCCGCTCCATAATAAACTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | ACAAGTTTATTATGGAGCGGGTTTGGGCCAGTTGTTGACATGTTTGTCTTGTTAAAGGTTCAGGAATCCTaGAGACAGCACCATCGCGGG | + |
Preference number: 5 (lower is better) Translates to: TSLLWSGFGPVVDMFVLLKVQES*RQHHRG Trigger: CCCGCGATGGTGCTGTCTCAAGGATTCCTGAACCTT...TAACAAGACAAACATGTCAACAACTGGCCCAAACCCGCTCCATAATAAACTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS CCA 90 bp | ATCTGCTTGAAGATAAACTCCTTTCTTCCAACTGACAATCAAGCTTaGAAGCGTCATGGACTCTCTCCGTCATACCTATGGATGCAACAG | + |
Preference number: 5 (lower is better) Translates to: ICLKINSFLPTDNQA*KRHGLSPSYLWMQQ Trigger: CTGTTGCATCCATAGGTATGACGGAGAGAGTCCATGACGCTTCCAAGCTTGATTGTCAGTTGGAAGAAAGGAGTTTATCTTCAAGCAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232728.2 |
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CDS-3UTR CAA 90 bp | ACAAGTTTATTATGGAGCGGGTTTGGGCCAGTTGTTGACATGTTTGTCTTGTTAATGGTGTCCTTGACCTaGCCTTTCAGGCTGCTTGAA | + |
Preference number: 5 (lower is better) Translates to: TSLLWSGFGPVVDMFVLLMVSLT*PFRLLE Trigger: TTCAAGCAGCCTGAAAGGCAAGGTCAAGGACACCAT...TAACAAGACAAACATGTCAACAACTGGCCCAAACCCGCTCCATAATAAACTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | ACAAGTTTATTATGGAGCGGGTTTGGGCCAGTTGTTGACATGTTTGTCTTGTTATGCCTTTCAGGCTGCTaGAAGATAAACTCCTTTCTT | + |
Preference number: 5 (lower is better) Translates to: TSLLWSGFGPVVDMFVLLCLSGC*KINSFL Trigger: AAGAAAGGAGTTTATCTTCAAGCAGCCTGAAAGGCA...TAACAAGACAAACATGTCAACAACTGGCCCAAACCCGCTCCATAATAAACTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS-3UTR CAA 90 bp | ACAAGTTTATTATGGAGCGGGTTTGGGCCAGTTGTTGACATGTTTGTCTTGTTAAACAAGACCATCATGTaGAGGATATACTTGGAGAGG | + |
Preference number: 5 (lower is better) Translates to: TSLLWSGFGPVVDMFVLLNKTIM*RIYLER Trigger: CCTCTCCAAGTATATCCTCAACATGATGGTCTTGTT...TAACAAGACAAACATGTCAACAACTGGCCCAAACCCGCTCCATAATAAACTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042692.13 ENSMUST00000043925.16 ENSMUST00000114836.9 ENSMUST00000129046.9 ENSMUST00000232798.2 ENSMUST00000233898.2 |
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CDS CCA 72 bp | TCATGGACTCTCTCCGTCATACACGATCGGTGCCCCTaGGCGCTGCTCGCGCTCTCCCGGGTGTTTCCCCCG | + |
Preference number: 6 (lower is better) Translates to: SWTLSVIHDRCP*ALLALSRVFPP Trigger: CGGGGGAAACACCCGGGAGAGCGCGAGCAGCGCCCAGGGGCACCGATCGTGTATGACGGAGAGAGTCCATGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043925.16 ENSMUST00000114836.9 |
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CDS GCA 72 bp | GAAGCGTCATGGACTCTCTCCGTCATACCTAGCCTGTaGGAGCTCGGGGTCCCGCCGAGGTGGCCCTTTCCC | + |
Preference number: 6 (lower is better) Translates to: EASWTLSVIPSL*ELGVPPRWPFP Trigger: GGGAAAGGGCCACCTCGGCGGGACCCCGAGCTCGCACAGGCTAGGTATGACGGAGAGAGTCCATGACGCTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042692.13 ENSMUST00000129046.9 |
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CDS GCA 72 bp | GAAGCGTCATGGACTCTCTCCGTCATACACGATCGGTaGCCCTGGGCGCTGCTCGCGCTCTCCCGGGTGTTT | + |
Preference number: 6 (lower is better) Translates to: EASWTLSVIHDR*PWALLALSRVF Trigger: AAACACCCGGGAGAGCGCGAGCAGCGCCCAGGGGCACCGATCGTGTATGACGGAGAGAGTCCATGACGCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043925.16 ENSMUST00000114836.9 |
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CDS TCA 72 bp | ACAGGAAATCCATGGCAACGCTTGTGCGGGAGCATTTaGAACGAGGGGGAGGGAGGTCCGGACCTGCAGTCC | + |
Preference number: 6 (lower is better) Translates to: TGNPWQRLCGSI*NEGEGGPDLQS Trigger: GGACTGCAGGTCCGGACCTCCCTCCCCCTCGTTTCAAATGCTCCCGCACAAGCGTTGCCATGGATTTCCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233615.2 |
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CDS TCA 72 bp | CAGGATCTGCTTGAAGATAAACTCCTTTCTTCCAACTaGCAATCAAGCTTGGAAGCGTCATGGACTCTCTCC | + |
Preference number: 6 (lower is better) Translates to: QDLLEDKLLSSN*QSSLEASWTLS Trigger: GGAGAGAGTCCATGACGCTTCCAAGCTTGATTGTCAGTTGGAAGAAAGGAGTTTATCTTCAAGCAGATCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232728.2 |
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CDS CCA 72 bp | AAGATAAACTCCTTTCTTCCAACTGACAATCAAGCTTaGAAGCGTCATGGACTCTCTCCGTCATACACGATC | + |
Preference number: 6 (lower is better) Translates to: KINSFLPTDNQA*KRHGLSPSYTI Trigger: GATCGTGTATGACGGAGAGAGTCCATGACGCTTCCAAGCTTGATTGTCAGTTGGAAGAAAGGAGTTTATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043925.16 ENSMUST00000114836.9 |