Pregenerated sensors for TCP10C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052469Ensembl transcript IDs: ENSMUST00000097403.4, ENSMUST00000233884.2, ENSMUST00000233944.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCATGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTCTaGCCTCTCTCCCAAGATGGTGGTGGCTACATGGTCTCTTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: PWKPCPGPHFWLLLL*PLSQDGGGYMVSFF Trigger: AAAGAAAGAGACCATGTAGCCACCACCATCTTGGGAGAGAGGTCAGAGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| 3UTR GCA 90 bp | CTTTGTCTGTTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTaGCTGGCCTTGAGTCTGTTGGATGCACTACTTCCAGTCCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: LCLFWSKLYLEIGAY*LALSLLDALLPVQD Trigger: ATCCTGGACTGGAAGTAGTGCATCCAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233884.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTGTTGGCCAAGCAAAAACACGGAGCCAGCTGTTGTTAACGGCTGCTCCCGTCTGGACAAGGCCATaGAAGCCATGTCCAGGACCT | + |
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Preference number: 2 (lower is better) Translates to: AGVGQAKTRSQLLLTAAPVWTRP*KPCPGP Trigger: AGGTCCTGGACATGGCTTCCATGGCCTTGTCCAGAC...GGGAGCAGCCGTTAACAACAGCTGGCTCCGTGTTTTTGCTTGGCCAACACCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGGCCAAGCAAAAACACGGAGCCAGCTGTTGTTAACGGCTGCTCCCAGGAACGTCTGGACAAGGCCATaGAAGCCATGTCCAGGACCT | + |
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Preference number: 2 (lower is better) Translates to: VGQAKTRSQLLLTAAPRNVWTRP*KPCPGP Trigger: AGGTCCTGGACATGGCTTCCATGGCCTTGTCCAGAC...GTTCCTGGGAGCAGCCGTTAACAACAGCTGGCTCCGTGTTTTTGCTTGGCCAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGGTGTTGGCCAAGCAAAAACACGGAGCCAGCTGTTGTTAACGGCTGCTCCCACTTCCAGTCCAGGATaGCAGTTCCCTTCTCATCTT | + |
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Preference number: 2 (lower is better) Translates to: AGVGQAKTRSQLLLTAAPTSSPG*QFPSHL Trigger: AAGATGAGAAGGGAACTGTCATCCTGGACTGGAAGT...GGGAGCAGCCGTTAACAACAGCTGGCTCCGTGTTTTTGCTTGGCCAACACCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233884.2 |
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| 3UTR-3UTR GCA 90 bp | CTACTTCCAGTCCAGGATGACAGTTCCCTTCTCATCTTTGACCCTGACCCTCCCACACAGTCTTGGTGGTaGCATCTGGGAATTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: LLPVQDDSSLLIFDPDPPTQSWW*HLGIPS Trigger: GGAAGGAATTCCCAGATGGCACCACCAAGACTGTGT...GGGAGGGTCAGGGTCAAAGATGAGAAGGGAACTGTCATCCTGGACTGGAAGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233884.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTTGGATGCACTACTTCCAGTCCAGGATGACAGTTCCCTTCTCATCTTTGACTCTCCTGGCAGCCATTaGAATACACAGTCTTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LLDALLPVQDDSSLLIFDSPGSH*NTQSWW Trigger: CCACCAAGACTGTGTATTGCAATGGCTGCCAGGAGA...GTCAAAGATGAGAAGGGAACTGTCATCCTGGACTGGAAGTAGTGCATCCAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233884.2 |
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| 3UTR CAA 90 bp | AAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTaGGATGCACTACTTCCAGTCCAGGATGACAGTTCCCTTCTCATC | + |
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Preference number: 2 (lower is better) Translates to: KLYLEIGAYCLALSL*DALLPVQDDSSLLI Trigger: GATGAGAAGGGAACTGTCATCCTGGACTGGAAGTAGTGCATCCAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233884.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTTCTTTACAATTTTTGGATGTCTCTTTACTCCTCATGTGCAGGGGATCTTGGCTACTGCTTCTCTaGCCTCTCTCCCAAGATGGT | + |
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Preference number: 2 (lower is better) Translates to: SLSLQFLDVSLLLMCRGSWLLLL*PLSQDG Trigger: ACCATCTTGGGAGAGAGGTCAGAGAAGCAGTAGCCA...AGATCCCCTGCACATGAGGAGTAAAGAGACATCCAAAAATTGTAAAGAAAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTACATGGTCTCTTTCTTTACAATTTTTGGATGTCTCTTTACTCCTCATGTGACAGAAGGCATGGTCTaGACAAGGCCATGGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: GYMVSFFTIFGCLFTPHVTEGMV*TRPWKP Trigger: TGGCTTCCATGGCCTTGTCCAGACCATGCCTTCTGT...CACATGAGGAGTAAAGAGACATCCAAAAATTGTAAAGAAAGAGACCATGTAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| 3UTR-3UTR TCA 90 bp | TACATGGTCTCTTTCTTTACAATTTTTGGATGTCTCTTTACTCCTCATGTGCAGTGGCTACTGCTTCTCTaGCCTCTCTCCCAAGATGGT | + |
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Preference number: 2 (lower is better) Translates to: YMVSFFTIFGCLFTPHVQWLLLL*PLSQDG Trigger: ACCATCTTGGGAGAGAGGTCAGAGAAGCAGTAGCCA...CTGCACATGAGGAGTAAAGAGACATCCAAAAATTGTAAAGAAAGAGACCATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| 3UTR-3UTR CCA 90 bp | TACATGGTCTCTTTCTTTACAATTTTTGGATGTCTCTTTACTCCTCATGTGCAGGATGCAGGCAGGTGTTaGCCAAGCAAAAACACGGAG | + |
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Preference number: 2 (lower is better) Translates to: YMVSFFTIFGCLFTPHVQDAGRC*PSKNTE Trigger: CTCCGTGTTTTTGCTTGGCCAACACCTGCCTGCATC...CTGCACATGAGGAGTAAAGAGACATCCAAAAATTGTAAAGAAAGAGACCATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| 3UTR-3UTR CCA 90 bp | GGCTACATGGTCTCTTTCTTTACAATTTTTGGATGTCTCTTTACTCCTCATGTGCTTGGTGGTGCCATCTaGGAATTCCTTCCGCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: GYMVSFFTIFGCLFTPHVLGGAI*EFLPLE Trigger: TTCAAGCGGAAGGAATTCCCAGATGGCACCACCAAG...CACATGAGGAGTAAAGAGACATCCAAAAATTGTAAAGAAAGAGACCATGTAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233884.2 |
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| 3UTR-3UTR CCA 90 bp | ATCGTGAGTCGCTTTGTCTGTTTTGGTCAAAACTATATTTGGAGATTGGAGCCTAACTTCAACACCATCTaGGTAGGTTGTGTGCATTGT | + |
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Preference number: 2 (lower is better) Translates to: IVSRFVCFGQNYIWRLEPNFNTI*VGCVHC Trigger: ACAATGCACACAACCTACCCAGATGGTGTTGAAGTT...AGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGACAAAGCGACTCACGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233884.2 |
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| 3UTR-3UTR CCA 90 bp | GCTACATGGTCTCTTTCTTTACAATTTTTGGATGTCTCTTTACTCCTCATGTGCTCGCTTTGTCTGTTTTaGTCAAAACTATATTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: ATWSLSLQFLDVSLLLMCSLCLF*SKLYLE Trigger: CTCCAAATATAGTTTTGACCAAAACAGACAAAGCGA...GCACATGAGGAGTAAAGAGACATCCAAAAATTGTAAAGAAAGAGACCATGTAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTTCTTTACAATTTTTGGATGTCTCTTTACTCCTCATGTGCAGGGGATCTTCGCTTTGTCTGTTTTaGTCAAAACTATATTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: SLSLQFLDVSLLLMCRGSSLCLF*SKLYLE Trigger: CTCCAAATATAGTTTTGACCAAAACAGACAAAGCGA...AGATCCCCTGCACATGAGGAGTAAAGAGACATCCAAAAATTGTAAAGAAAGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| 3UTR GCA 72 bp | CGGCTGCTCCCAGGAACTAGCTGGCAGTGGTCACGTTaGTCCCATTGTACCCTCTGCTCTAGGGCCAAACTC | + |
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Preference number: 3 (lower is better) Translates to: RLLPGTSWQWSR*SHCTLCSRAKL Trigger: GAGTTTGGCCCTAGAGCAGAGGGTACAATGGGAGCAACGTGACCACTGCCAGCTAGTTCCTGGGAGCAGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| 3UTR-3UTR CAA 90 bp | GATGCAGGCAGGTGTTGGCCAAGCAAAAACACGGAGCCAGCTGTTGTTAACGGCTCCCCCTGGATCCCATaGATGAGGACTCTAAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: DAGRCWPSKNTEPAVVNGSPWIP*MRTLKG Trigger: CCCTTTTAGAGTCCTCATCAATGGGATCCAGGGGGA...GCCGTTAACAACAGCTGGCTCCGTGTTTTTGCTTGGCCAACACCTGCCTGCATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| 3UTR-3UTR CAA 90 bp | CTGCTCCCAGGAACTAGCTGGCAGTGGTCACGTTGCTCCCATTGTACCCTCTGCGGTAGGTTGTGTGCATaGTTTGTGCGTCCGCATAAT | + |
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Preference number: 3 (lower is better) Translates to: LLPGTSWQWSRCSHCTLCGRLCA*FVRPHN Trigger: ATTATGCGGACGCACAAACAATGCACACAACCTACC...GCAGAGGGTACAATGGGAGCAACGTGACCACTGCCAGCTAGTTCCTGGGAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233884.2 |
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| 3UTR GCA 72 bp | CATCGGTGTAGGGACTGGAAGATTGAGATTGGTGGCTaGCTAGTAGCTAGGGAGGAATCTCTCCTACAGCAT | + |
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Preference number: 3 (lower is better) Translates to: HRCRDWKIEIGG*LVAREESLLQH Trigger: ATGCTGTAGGAGAGATTCCTCCCTAGCTACTAGGCAGCCACCAATCTCAATCTTCCAGTCCCTACACCGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097403.4 |
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| 3UTR-3UTR CAA 90 bp | CCCATCGGGGAACACCGTCTCTTCACATCCATCCTTAAGCTGTTTCACTGTCCCAATTTTTCAGTCCACTaGTTAGGAAACTGCACAACT | + |
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Preference number: 3 (lower is better) Translates to: PIGEHRLFTSILKLFHCPNFSVH*LGNCTT Trigger: AGTTGTGCAGTTTCCTAACAAGTGGACTGAAAAATT...GGGACAGTGAAACAGCTTAAGGATGGATGTGAAGAGACGGTGTTCCCCGATGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233884.2 |
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| 3UTR GCA 72 bp | TTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTaGCTGGCCTTGAGTCTGTTGGATGCACTACTTCCA | + |
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Preference number: 3 (lower is better) Translates to: FWSKLYLEIGAY*LALSLLDALLP Trigger: TGGAAGTAGTGCATCCAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233884.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTTGGATGCACTACTTCCAGTCCAGGATGACAGTTCCCTTCTCATCTTTGACGTCGCTTTGTCTGTTTaGGTCAAAACTATATTTGGA | + |
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Preference number: 3 (lower is better) Translates to: LLDALLPVQDDSSLLIFDVALSV*VKTIFG Trigger: TCCAAATATAGTTTTGACCAAAACAGACAAAGCGAC...GTCAAAGATGAGAAGGGAACTGTCATCCTGGACTGGAAGTAGTGCATCCAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233884.2 |
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| 3UTR-3UTR CAA 90 bp | GGCTACATGGTCTCTTTCTTTACAATTTTTGGATGTCTCTTTACTCCTCATGTGCACCATCTGGGTAGGTaGTGTGCATTGTTTGTGCGT | + |
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Preference number: 3 (lower is better) Translates to: GYMVSFFTIFGCLFTPHVHHLGR*CALFVR Trigger: ACGCACAAACAATGCACACAACCTACCCAGATGGTG...CACATGAGGAGTAAAGAGACATCCAAAAATTGTAAAGAAAGAGACCATGTAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233884.2 |
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| 3UTR TCA 72 bp | CGCATAATAATAAATCCCCATAGGGTCGTGAATTCCTaGAAGTCACCATTTAAACAGGTCTCCCAGGATTTC | + |
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Preference number: 3 (lower is better) Translates to: RIIINPHRVVNS*KSPFKQVSQDF Trigger: GAAATCCTGGGAGACCTGTTTAAATGGTGACTTTCAGGAATTCACGACCCTATGGGGATTTATTATTATGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233884.2 |
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| 3UTR-3UTR CAA 90 bp | TACATGGTCTCTTTCTTTACAATTTTTGGATGTCTCTTTACTCCTCATGTGCAGGTCGCTTTGTCTGTTTaGGTCAAAACTATATTTGGA | + |
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Preference number: 3 (lower is better) Translates to: YMVSFFTIFGCLFTPHVQVALSV*VKTIFG Trigger: TCCAAATATAGTTTTGACCAAAACAGACAAAGCGAC...CTGCACATGAGGAGTAAAGAGACATCCAAAAATTGTAAAGAAAGAGACCATGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR TCA 90 bp | CTGCTCCCAGGAACTAGCTGGCAGTGGTCACGTTGCTCCCATTGTACCCTCTGCATGGCTTGTCTCTGCTaGCTATTTAGCCTCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LLPGTSWQWSRCSHCTLCMACLC*LFSLQV Trigger: CACCTGGAGGCTAAATAGTCAGCAGAGACAAGCCAT...GCAGAGGGTACAATGGGAGCAACGTGACCACTGCCAGCTAGTTCCTGGGAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR GCA 90 bp | CTGCTCCCAGGAACTAGCTGGCAGTGGTCACGTTGCTCCCATTGTACCCTCTGCCTGTGTCCAGGAATGTaGTGTCAGACAGTGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LLPGTSWQWSRCSHCTLCLCPGM*CQTVVL Trigger: CAGAACCACTGTCTGACAGCACATTCCTGGACACAG...GCAGAGGGTACAATGGGAGCAACGTGACCACTGCCAGCTAGTTCCTGGGAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR GCA 90 bp | GCAGGTGTTGGCCAAGCAAAAACACGGAGCCAGCTGTTGTTAACGGCTGCTCCCAGGGATGACCCTGCTTaGTTGAGCATGCAGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: AGVGQAKTRSQLLLTAAPRDDPA*LSMQEK Trigger: CTTCTCCTGCATGCTCAAGCAAGCAGGGTCATCCCT...GGGAGCAGCCGTTAACAACAGCTGGCTCCGTGTTTTTGCTTGGCCAACACCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR GCA 90 bp | GTTGGCCAAGCAAAAACACGGAGCCAGCTGTTGTTAACGGCTGCTCCCAGGAACCTGTGTCCAGGAATGTaGTGTCAGACAGTGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: VGQAKTRSQLLLTAAPRNLCPGM*CQTVVL Trigger: CAGAACCACTGTCTGACAGCACATTCCTGGACACAG...GTTCCTGGGAGCAGCCGTTAACAACAGCTGGCTCCGTGTTTTTGCTTGGCCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR GCA 90 bp | GTTGGCCAAGCAAAAACACGGAGCCAGCTGTTGTTAACGGCTGCTCCCAGGAACCACCTGCACCCACAGTaGATTTGGGGAAAAACAAGG | + |
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Preference number: 4 (lower is better) Translates to: VGQAKTRSQLLLTAAPRNHLHPQ*IWGKTR Trigger: CCTTGTTTTTCCCCAAATGCACTGTGGGTGCAGGTG...GTTCCTGGGAGCAGCCGTTAACAACAGCTGGCTCCGTGTTTTTGCTTGGCCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| 3UTR CAA 72 bp | TTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTaGGATGCACTACTTCCAGTCCAGGATGACAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LEIGAYCLALSL*DALLPVQDDSS Trigger: GGAACTGTCATCCTGGACTGGAAGTAGTGCATCCAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233884.2 |
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| CDS-3UTR GCA 90 bp | CTGGACAAGGCCATGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTTCACAGATCTGCTTCTaGAGCCCCACAACCTCATCA | + |
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Preference number: 4 (lower is better) Translates to: LDKAMEAMSRTSFLATASSQICF*SPTTSS Trigger: TGATGAGGTTGTGGGGCTGCAGAAGCAGATCTGTGA...AGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCATGGCCTTGTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR GCA 90 bp | GGCAGGTGTTGGCCAAGCAAAAACACGGAGCCAGCTGTTGTTAACGGCTGCTCCGTTCTGGTGACATTCTaGCGAAGCTTCTTTGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: GRCWPSKNTEPAVVNGCSVLVTF*RSFFAE Trigger: TTCTGCAAAGAAGCTTCGGCAGAATGTCACCAGAAC...GGAGCAGCCGTTAACAACAGCTGGCTCCGTGTTTTTGCTTGGCCAACACCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR GCA 90 bp | GTCTGGACAAGGCCATGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTACACAGTCTTGGTGGTaGCATCTGGGAATTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: VWTRPWKPCPGPHFWLLLTQSWW*HLGIPS Trigger: GGAAGGAATTCCCAGATGGCACCACCAAGACTGTGT...AAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCATGGCCTTGTCCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097403.4 |
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| CDS-3UTR GCA 90 bp | TACTGCTTCTCTGACCTCTCTCCCAAGATGGTGGTGGCTACATGGTCTCTTTCTCTCCGGTGGCCATTGTaGTTCTGTTTGGAGGACTTC | + |
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Preference number: 4 (lower is better) Translates to: YCFSDLSPKMVVATWSLSLRWPL*FCLEDF Trigger: GAAGTCCTCCAAACAGAAGCACAATGGCCACCGGAG...AGAAAGAGACCATGTAGCCACCACCATCTTGGGAGAGAGGTCAGAGAAGCAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR CCA 90 bp | GTTGGCCAAGCAAAAACACGGAGCCAGCTGTTGTTAACGGCTGCTCCCAGGAACTCAGATCCTCCAACATaGCTTGTCTCTGCTGACTAT | + |
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Preference number: 4 (lower is better) Translates to: VGQAKTRSQLLLTAAPRNSDPPT*LVSADY Trigger: ATAGTCAGCAGAGACAAGCCATGTTGGAGGATCTGA...GTTCCTGGGAGCAGCCGTTAACAACAGCTGGCTCCGTGTTTTTGCTTGGCCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR CCA 90 bp | GCAGGTGTTGGCCAAGCAAAAACACGGAGCCAGCTGTTGTTAACGGCTGCTCCCTCCTCTTCTTATGGTTaGACCCTTTTCCTTGACTCA | + |
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Preference number: 4 (lower is better) Translates to: AGVGQAKTRSQLLLTAAPSSSYG*TLFLDS Trigger: TGAGTCAAGGAAAAGGGTCCAACCATAAGAAGAGGA...GGGAGCAGCCGTTAACAACAGCTGGCTCCGTGTTTTTGCTTGGCCAACACCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR GCA 90 bp | TACTGCTTCTCTGACCTCTCTCCCAAGATGGTGGTGGCTACATGGTCTCTTTCTGTTCTGGTGACATTCTaGCGAAGCTTCTTTGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: YCFSDLSPKMVVATWSLSVLVTF*RSFFAE Trigger: TTCTGCAAAGAAGCTTCGGCAGAATGTCACCAGAAC...AGAAAGAGACCATGTAGCCACCACCATCTTGGGAGAGAGGTCAGAGAAGCAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR TCA 90 bp | GCTTTGTCTGTTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCATGGCTTGTCTCTGCTaGCTATTTAGCCTCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: ALSVLVKTIFGDWSLLPGMACLC*LFSLQV Trigger: CACCTGGAGGCTAAATAGTCAGCAGAGACAAGCCAT...GCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGACAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| 3UTR CAA 72 bp | CGTGAGTCGCTTTGTCTGTTTTGGTCAAAACTATATTaGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: RESLCLFWSKLY*EIGAYCLALSL Trigger: CAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGACAAAGCGACTCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR GCA 90 bp | ATGGTTAAATCAAGTCTATTCATACATCAGGCACCAGTGAAGATACATCCCCCTAGGGATGACCCTGCTTaGTTGAGCATGCAGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: MVKSSLFIHQAPVKIHPPRDDPA*LSMQEK Trigger: CTTCTCCTGCATGCTCAAGCAAGCAGGGTCATCCCT...AGGGGGATGTATCTTCACTGGTGCCTGATGTATGAATAGACTTGATTTAACCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR CCA 90 bp | TCTCTTTCTTTACAATTTTTGGATGTCTCTTTACTCCTCATGTGCAGGGGATCTGACAGCCTTTCATCCTaGGAGTCTGTTCCTCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: SLSLQFLDVSLLLMCRGSDSLSS*ESVPPV Trigger: CACCGGAGGAACAGACTCCCAGGATGAAAGGCTGTC...AGATCCCCTGCACATGAGGAGTAAAGAGACATCCAAAAATTGTAAAGAAAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR CCA 90 bp | CTGGACAAGGCCATGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTTATCTTTATGTACACTaGCTTTTCATCCACAGATGT | + |
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Preference number: 4 (lower is better) Translates to: LDKAMEAMSRTSFLATASYLYVH*LFIHRC Trigger: ACATCTGTGGATGAAAAGCCAGTGTACATAAAGATA...AGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCATGGCCTTGTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR GCA 90 bp | ATGGTTAAATCAAGTCTATTCATACATCAGGCACCAGTGAAGATACATCCCCCTTCACAGATCTGCTTCTaGAGCCCCACAACCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: MVKSSLFIHQAPVKIHPPSQICF*SPTTSS Trigger: TGATGAGGTTGTGGGGCTGCAGAAGCAGATCTGTGA...AGGGGGATGTATCTTCACTGGTGCCTGATGTATGAATAGACTTGATTTAACCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR GCA 90 bp | TGGCTACATGGTCTCTTTCTTTACAATTTTTGGATGTCTCTTTACTCCTCATGTCTCCGGTGGCCATTGTaGTTCTGTTTGGAGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: WLHGLFLYNFWMSLYSSCLRWPL*FCLEDF Trigger: GAAGTCCTCCAAACAGAAGCACAATGGCCACCGGAG...ACATGAGGAGTAAAGAGACATCCAAAAATTGTAAAGAAAGAGACCATGTAGCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR GCA 90 bp | CAAGGGAATCGTGAGTCGCTTTGTCTGTTTTGGTCAAAACTATATTTGGAGATTCACCTGCACCCACAGTaGATTTGGGGAAAAACAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGNRESLCLFWSKLYLEIHLHPQ*IWGKTR Trigger: CCTTGTTTTTCCCCAAATGCACTGTGGGTGCAGGTG...AATCTCCAAATATAGTTTTGACCAAAACAGACAAAGCGACTCACGATTCCCTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR GCA 90 bp | CAAGGGAATCGTGAGTCGCTTTGTCTGTTTTGGTCAAAACTATATTTGGAGATTTCTCCTGGCAGCCATTaGAATACACAGTCTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QGNRESLCLFWSKLYLEISPGSH*NTQSWW Trigger: CCACCAAGACTGTGTATTGCAATGGCTGCCAGGAGA...AATCTCCAAATATAGTTTTGACCAAAACAGACAAAGCGACTCACGATTCCCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097403.4 |
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| 3UTR CAA 72 bp | ATGGTGGTGGCTACATGGTCTCTTTCTTTACAATTTTaGGATGTCTCTTTACTCCTCATGTGCAGGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: MVVATWSLSLQF*DVSLLLMCRGS Trigger: AGATCCCCTGCACATGAGGAGTAAAGAGACATCCAAAAATTGTAAAGAAAGAGACCATGTAGCCACCACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR CCA 90 bp | ATCGTGAGTCGCTTTGTCTGTTTTGGTCAAAACTATATTTGGAGATTGGAGCCTTCAGATCCTCCAACATaGCTTGTCTCTGCTGACTAT | + |
|
Preference number: 4 (lower is better) Translates to: IVSRFVCFGQNYIWRLEPSDPPT*LVSADY Trigger: ATAGTCAGCAGAGACAAGCCATGTTGGAGGATCTGA...AGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGACAAAGCGACTCACGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR CCA 90 bp | ATGGTTAAATCAAGTCTATTCATACATCAGGCACCAGTGAAGATACATCCCCCTAACTTCAACACCATCTaGGTAGGTTGTGTGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: MVKSSLFIHQAPVKIHPPNFNTI*VGCVHC Trigger: ACAATGCACACAACCTACCCAGATGGTGTTGAAGTT...AGGGGGATGTATCTTCACTGGTGCCTGATGTATGAATAGACTTGATTTAACCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097403.4 |
||
| CDS-3UTR GCA 90 bp | GGCTACATGGTCTCTTTCTTTACAATTTTTGGATGTCTCTTTACTCCTCATGTGCTGCCGAAGCTTCTTTaGAGAAATTTGGAAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: GYMVSFFTIFGCLFTPHVLPKLL*RNLEDM Trigger: CATGTCTTCCAAATTTCTGCAAAGAAGCTTCGGCAG...CACATGAGGAGTAAAGAGACATCCAAAAATTGTAAAGAAAGAGACCATGTAGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR CCA 90 bp | TGGCTACATGGTCTCTTTCTTTACAATTTTTGGATGTCTCTTTACTCCTCATGTTCCTCTTCTTATGGTTaGACCCTTTTCCTTGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: WLHGLFLYNFWMSLYSSCSSSYG*TLFLDS Trigger: TGAGTCAAGGAAAAGGGTCCAACCATAAGAAGAGGA...ACATGAGGAGTAAAGAGACATCCAAAAATTGTAAAGAAAGAGACCATGTAGCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS CCA 90 bp | TGTTGCTTGCTCTTGCCGAGGTGGGCGAGCCTATACAGGCTTTGGTaGCCTCCGCATCCTGCTTCTTCAAGGTCTTCAGCTCCGCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: CCLLLPRWASLYRLW*PPHPASSRSSAPHG Trigger: TCCGTGCGGAGCTGAAGACCTTGAAGAAGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCTCGCCCACCTCGGCAAGAGCAAGCAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 ENSMUST00000233944.2 |
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| CDS CCA 90 bp | GAGTGTTGCTTGCTCTTGCCGAGGTGGGCGAGCCTATACAGGCTTTaGTGGCCTCCGCATCCTGCTTCTTCAAGGTCTTCAGCTCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ECCLLLPRWASLYRL*WPPHPASSRSSAPH Trigger: GTGCGGAGCTGAAGACCTTGAAGAAGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCTCGCCCACCTCGGCAAGAGCAAGCAACACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 ENSMUST00000233944.2 |
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| CDS GCA 90 bp | GGGAAGGTGATGATGGTTCGCCCGTCGCTGAGCATCCGCTCCACCTaGACCCACAGTGCATTTGGGGAAAAACAAGGGATGACCCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GKVMMVRPSLSIRST*THSAFGEKQGMTLL Trigger: AAGCAGGGTCATCCCTTGTTTTTCCCCAAATGCACTGTGGGTGCAGGTGGAGCGGATGCTCAGCGACGGGCGAACCATCATCACCTTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS CCA 90 bp | GAGGGTGGTCTTCTTGTCAGCACTGATCTCCTTCCTGGTTCCATTTaGGAAGGTGATGATGGTTCGCCCGTCGCTGAGCATCCGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: EGGLLVSTDLLPGSI*EGDDGSPVAEHPLH Trigger: GTGGAGCGGATGCTCAGCGACGGGCGAACCATCATCACCTTCCCAAATGGAACCAGGAAGGAGATCAGTGCTGACAAGAAGACCACCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS TCA 90 bp | TCCGCTCCACCTGCACCCACAGTGCATTTGGGGAAAAACAAGGGATaGCCCTGCTTGCTTGAGCATGCAGGAGAAGTTCACCGTCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SAPPAPTVHLGKNKG*PCLLEHAGEVHRPK Trigger: CTTCGGACGGTGAACTTCTCCTGCATGCTCAAGCAAGCAGGGTCATCCCTTGTTTTTCCCCAAATGCACTGTGGGTGCAGGTGGAGCGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR CAA 90 bp | GTCTGGACAAGGCCATGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTTACACTGGCAGAGTGTaGCTTGCTCTTGCCGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VWTRPWKPCPGPHFWLLLYTGRV*LALAEV Trigger: CACCTCGGCAAGAGCAAGCAACACTCTGCCAGTGTA...AAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCATGGCCTTGTCCAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR CAA 90 bp | TACTGCTTCTCTGACCTCTCTCCCAAGATGGTGGTGGCTACATGGTCTCTTTCTTACACTGGCAGAGTGTaGCTTGCTCTTGCCGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: YCFSDLSPKMVVATWSLSYTGRV*LALAEV Trigger: CACCTCGGCAAGAGCAAGCAACACTCTGCCAGTGTA...AGAAAGAGACCATGTAGCCACCACCATCTTGGGAGAGAGGTCAGAGAAGCAGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR CAA 90 bp | GTTGGCCAAGCAAAAACACGGAGCCAGCTGTTGTTAACGGCTGCTCCCAGGAACGGTAGGTTGTGTGCATaGTTTGTGCGTCCGCATAAT | + |
|
Preference number: 5 (lower is better) Translates to: VGQAKTRSQLLLTAAPRNGRLCA*FVRPHN Trigger: ATTATGCGGACGCACAAACAATGCACACAACCTACC...GTTCCTGGGAGCAGCCGTTAACAACAGCTGGCTCCGTGTTTTTGCTTGGCCAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097403.4 |
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| CDS TCA 90 bp | ACCCACAGTGCATTTGGGGAAAAACAAGGGATGACCCTGCTTGCTTaGGCATGCAGGAGAAGTTCACCGTCCGAAGTCTCTGAATTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: THSAFGEKQGMTLLA*ACRRSSPSEVSEFE Trigger: CTCAAATTCAGAGACTTCGGACGGTGAACTTCTCCTGCATGCTCAAGCAAGCAGGGTCATCCCTTGTTTTTCCCCAAATGCACTGTGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR CAA 90 bp | GTTGGCCAAGCAAAAACACGGAGCCAGCTGTTGTTAACGGCTGCTCCCAGGAACTCTGCCGAAGCTTCTTaGCAGAAATTTGGAAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: VGQAKTRSQLLLTAAPRNSAEAS*QKFGRH Trigger: ATGTCTTCCAAATTTCTGCAAAGAAGCTTCGGCAGA...GTTCCTGGGAGCAGCCGTTAACAACAGCTGGCTCCGTGTTTTTGCTTGGCCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR CAA 90 bp | CTGCTCCCAGGAACTAGCTGGCAGTGGTCACGTTGCTCCCATTGTACCCTCTGCAATTTTTCAGTCCACTaGTTAGGAAACTGCACAACT | + |
|
Preference number: 5 (lower is better) Translates to: LLPGTSWQWSRCSHCTLCNFSVH*LGNCTT Trigger: AGTTGTGCAGTTTCCTAACAAGTGGACTGAAAAATT...GCAGAGGGTACAATGGGAGCAACGTGACCACTGCCAGCTAGTTCCTGGGAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097403.4 |
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| CDS GCA 90 bp | AATTTGAGGACCAGATGTCAGCCAGTGACTCTGTGTCCAGGAATGTaGTGTCAGACAGTGGTTCTGGTGACATTCTGCCGAAGCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: NLRTRCQPVTLCPGM*CQTVVLVTFCRSFF Trigger: AAAGAAGCTTCGGCAGAATGTCACCAGAACCACTGTCTGACAGCACATTCCTGGACACAGAGTCACTGGCTGACATCTGGTCCTCAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS CCA 90 bp | TGTATAACCTTTTCATCCACAGATGTAAAAGACAGCCTTTCATCCTaGGAGTCTGTTCCTCCGGTGGCCATTGTGCTTCTGTTTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CITFSSTDVKDSLSS*ESVPPVAIVLLFGG Trigger: TCCTCCAAACAGAAGCACAATGGCCACCGGAGGAACAGACTCCCAGGATGAAAGGCTGTCTTTTACATCTGTGGATGAAAAGGTTATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS TCA 90 bp | GCTTCTGTTTGGAGGACTTCCAGAAAGCTCATCTCTTTCATCCCATaGGGTTGTCCTCTCGGAATCAATTCCCTCTATCTTTATGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: ASVWRTSRKLISFIP*GCPLGINSLYLYVH Trigger: GTGTACATAAAGATAGAGGGAATTGATTCCGAGAGGACAACCTCATGGGATGAAAGAGATGAGCTTTCTGGAAGTCCTCCAAACAGAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS-3UTR CAA 90 bp | AAAACAAACAAACAAACAAACACCCACATTCTCAGAACTCCTCATCGGTGTAGGCCGAAGTCTCTGAATTaGAGGACCAGATGTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KTNKQTNTHILRTPHRCRPKSLN*RTRCQP Trigger: TGGCTGACATCTGGTCCTCAAATTCAGAGACTTCGG...CCTACACCGATGAGGAGTTCTGAGAATGTGGGTGTTTGTTTGTTTGTTTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097403.4 |
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| CDS-3UTR CAA 90 bp | CAAGGGAATCGTGAGTCGCTTTGTCTGTTTTGGTCAAAACTATATTTGGAGATTTCTGCCGAAGCTTCTTaGCAGAAATTTGGAAGACAT | + |
|
Preference number: 5 (lower is better) Translates to: QGNRESLCLFWSKLYLEISAEAS*QKFGRH Trigger: ATGTCTTCCAAATTTCTGCAAAGAAGCTTCGGCAGA...AATCTCCAAATATAGTTTTGACCAAAACAGACAAAGCGACTCACGATTCCCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS GCA 72 bp | GGCGAGCCTATACAGGCTTTGGTGGCCTCCGCATCCTaGTTCTTCAAGGTCTTCAGCTCCGCACGGATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GEPIQALVASAS*FFKVFSSARIS Trigger: GGAGATCCGTGCGGAGCTGAAGACCTTGAAGAAGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCTCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 ENSMUST00000233944.2 |
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| CDS CAA 90 bp | AGAGTGTTGCTTGCTCTTGCCGAGGTGGGCGAGCCTATACAGGCTTaGGTGGCCTCCGCATCCTGCTTCTTCAAGGTCTTCAGCTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: RVLLALAEVGEPIQA*VASASCFFKVFSSA Trigger: TGCGGAGCTGAAGACCTTGAAGAAGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCTCGCCCACCTCGGCAAGAGCAAGCAACACTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 ENSMUST00000233944.2 |
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| CDS CCA 72 bp | CTCTTGCCGAGGTGGGCGAGCCTATACAGGCTTTGGTaGCCTCCGCATCCTGCTTCTTCAAGGTCTTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLPRWASLYRLW*PPHPASSRSSA Trigger: AGCTGAAGACCTTGAAGAAGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCTCGCCCACCTCGGCAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 ENSMUST00000233944.2 |
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| CDS CCA 72 bp | TGTACACTGGCAGAGTGTTGCTTGCTCTTGCCGAGGTaGGCGAGCCTATACAGGCTTTGGTGGCCTCCGCAT | + |
|
Preference number: 6 (lower is better) Translates to: CTLAECCLLLPR*ASLYRLWWPPH Trigger: ATGCGGAGGCCACCAAAGCCTGTATAGGCTCGCCCACCTCGGCAAGAGCAAGCAACACTCTGCCAGTGTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 ENSMUST00000233944.2 |
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| CDS CAA 72 bp | CTTGCTCTTGCCGAGGTGGGCGAGCCTATACAGGCTTaGGTGGCCTCCGCATCCTGCTTCTTCAAGGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LALAEVGEPIQA*VASASCFFKVF Trigger: GAAGACCTTGAAGAAGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCTCGCCCACCTCGGCAAGAGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 ENSMUST00000233944.2 |
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| CDS GCA 72 bp | ATGATGGTTCGCCCGTCGCTGAGCATCCGCTCCACCTaGACCCACAGTGCATTTGGGGAAAAACAAGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: MMVRPSLSIRST*THSAFGEKQGM Trigger: CATCCCTTGTTTTTCCCCAAATGCACTGTGGGTGCAGGTGGAGCGGATGCTCAGCGACGGGCGAACCATCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS CCA 72 bp | TTGCTCTTGCCGAGGTGGGCGAGCCTATACAGGCTTTaGTGGCCTCCGCATCCTGCTTCTTCAAGGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLLPRWASLYRL*WPPHPASSRSS Trigger: TGAAGACCTTGAAGAAGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCTCGCCCACCTCGGCAAGAGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 ENSMUST00000233944.2 |
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| CDS GCA 72 bp | CTTGTGAGCTCTGTCCCAAGGTCACAGATCTGCTTCTaGAGCCCCACAACCTCATCAAGCTTGCTGTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LVSSVPRSQICF*SPTTSSSLLSS Trigger: GGAAGACAGCAAGCTTGATGAGGTTGTGGGGCTGCAGAAGCAGATCTGTGACCTTGGGACAGAGCTCACAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 ENSMUST00000233944.2 |
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| CDS TCA 72 bp | CCTGCACCCACAGTGCATTTGGGGAAAAACAAGGGATaGCCCTGCTTGCTTGAGCATGCAGGAGAAGTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PAPTVHLGKNKG*PCLLEHAGEVH Trigger: GTGAACTTCTCCTGCATGCTCAAGCAAGCAGGGTCATCCCTTGTTTTTCCCCAAATGCACTGTGGGTGCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS GCA 72 bp | GATTGTCTTGTGAGCTCTGTCCCAAGGTCACAGATCTaGTTCTGCAGCCCCACAACCTCATCAAGCTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DCLVSSVPRSQI*FCSPTTSSSLL Trigger: CAGCAAGCTTGATGAGGTTGTGGGGCTGCAGAAGCAGATCTGTGACCTTGGGACAGAGCTCACAAGACAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 ENSMUST00000233944.2 |
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| CDS CAA 72 bp | GCCTTTCATCCTGGGAGTCTGTTCCTCCGGTGGCCATaGTGCTTCTGTTTGGAGGACTTCCAGAAAGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: AFHPGSLFLRWP*CFCLEDFQKAH Trigger: ATGAGCTTTCTGGAAGTCCTCCAAACAGAAGCACAATGGCCACCGGAGGAACAGACTCCCAGGATGAAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS GCA 72 bp | TCCCTCTATCTTTATGTACACTGGCAGAGTGTTGCTTaGTCTTGCCGAGGTGGGCGAGCCTATACAGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SLYLYVHWQSVA*SCRGGRAYTGF Trigger: AAAGCCTGTATAGGCTCGCCCACCTCGGCAAGAGCAAGCAACACTCTGCCAGTGTACATAAAGATAGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 ENSMUST00000233944.2 |
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| CDS GCA 72 bp | CAATTCCCTCTATCTTTATGTACACTGGCAGAGTGTTaGTTGCTCTTGCCGAGGTGGGCGAGCCTATACAGG | + |
|
Preference number: 6 (lower is better) Translates to: QFPLSLCTLAEC*LLLPRWASLYR Trigger: CCTGTATAGGCTCGCCCACCTCGGCAAGAGCAAGCAACACTCTGCCAGTGTACATAAAGATAGAGGGAATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 ENSMUST00000233944.2 |
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| CDS GCA 72 bp | TTTCATCCTGGGAGTCTGTTCCTCCGGTGGCCATTGTaGTTCTGTTTGGAGGACTTCCAGAAAGCTCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: FHPGSLFLRWPL*FCLEDFQKAHL Trigger: GAGATGAGCTTTCTGGAAGTCCTCCAAACAGAAGCACAATGGCCACCGGAGGAACAGACTCCCAGGATGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS GCA 72 bp | CAGTGCATTTGGGGAAAAACAAGGGATGACCCTGCTTaGTTGAGCATGCAGGAGAAGTTCACCGTCCGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: QCIWGKTRDDPA*LSMQEKFTVRS Trigger: ACTTCGGACGGTGAACTTCTCCTGCATGCTCAAGCAAGCAGGGTCATCCCTTGTTTTTCCCCAAATGCACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
||
| CDS CCA 72 bp | TGCTTCTTCAAGGTCTTCAGCTCCGCACGGATCTCCTaGTTCTCCTTTATCAGAGCATCGATCTGGCTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: CFFKVFSSARIS*FSFIRASIWLW Trigger: CCAAAGCCAGATCGATGCTCTGATAAAGGAGAACCAGGAGATCCGTGCGGAGCTGAAGACCTTGAAGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 ENSMUST00000233944.2 |
||
| CDS CCA 72 bp | CCTCTCGGAATCAATTCCCTCTATCTTTATGTACACTaGCAGAGTGTTGCTTGCTCTTGCCGAGGTGGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: PLGINSLYLYVH*QSVACSCRGGR Trigger: TCGCCCACCTCGGCAAGAGCAAGCAACACTCTGCCAGTGTACATAAAGATAGAGGGAATTGATTCCGAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
||
| CDS CCA 72 bp | GGAGTCTGTTCCTCCGGTGGCCATTGTGCTTCTGTTTaGAGGACTTCCAGAAAGCTCATCTCTTTCATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GVCSSGGHCASV*RTSRKLISFIP Trigger: TGGGATGAAAGAGATGAGCTTTCTGGAAGTCCTCCAAACAGAAGCACAATGGCCACCGGAGGAACAGACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
||
| CDS CCA 72 bp | AAGACAGCCTTTCATCCTGGGAGTCTGTTCCTCCGGTaGCCATTGTGCTTCTGTTTGGAGGACTTCCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: KTAFHPGSLFLR*PLCFCLEDFQK Trigger: TTTCTGGAAGTCCTCCAAACAGAAGCACAATGGCCACCGGAGGAACAGACTCCCAGGATGAAAGGCTGTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
||
| CDS CAA 72 bp | TTCCCTCTATCTTTATGTACACTGGCAGAGTGTTGCTaGCTCTTGCCGAGGTGGGCGAGCCTATACAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: FPLSLCTLAECC*LLPRWASLYRL Trigger: AAGCCTGTATAGGCTCGCCCACCTCGGCAAGAGCAAGCAACACTCTGCCAGTGTACATAAAGATAGAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 ENSMUST00000233944.2 |
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| CDS CAA 72 bp | CATGCAGGAGAAGTTCACCGTCCGAAGTCTCTGAATTaGAGGACCAGATGTCAGCCAGTGACTCTGTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: HAGEVHRPKSLN*RTRCQPVTLCP Trigger: TGGACACAGAGTCACTGGCTGACATCTGGTCCTCAAATTCAGAGACTTCGGACGGTGAACTTCTCCTGCATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS CCA 72 bp | TTTTCATCCACAGATGTAAAAGACAGCCTTTCATCCTaGGAGTCTGTTCCTCCGGTGGCCATTGTGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: FSSTDVKDSLSS*ESVPPVAIVLL Trigger: CAGAAGCACAATGGCCACCGGAGGAACAGACTCCCAGGATGAAAGGCTGTCTTTTACATCTGTGGATGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS TCA 72 bp | TGGAGGACTTCCAGAAAGCTCATCTCTTTCATCCCATaGGGTTGTCCTCTCGGAATCAATTCCCTCTATCTT | + |
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Preference number: 6 (lower is better) Translates to: WRTSRKLISFIP*GCPLGINSLYL Trigger: AAGATAGAGGGAATTGATTCCGAGAGGACAACCTCATGGGATGAAAGAGATGAGCTTTCTGGAAGTCCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS GCA 72 bp | TTCAACACCATCTGGGTAGGTTGTGTGCATTGTTTGTaGGTCCGCATAATAATAAATCGCTTTCTGATCGGA | + |
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Preference number: 6 (lower is better) Translates to: FNTIWVGCVHCL*VRIIINRFLIG Trigger: TCCGATCAGAAAGCGATTTATTATTATGCGGACGCACAAACAATGCACACAACCTACCCAGATGGTGTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097403.4 |
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| CDS CAA 72 bp | GCACAACTTCAACACCATCTGGGTAGGTTGTGTGCATaGTTTGTGCGTCCGCATAATAATAAATCGCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: AQLQHHLGRLCA*FVRPHNNKSLS Trigger: AGAAAGCGATTTATTATTATGCGGACGCACAAACAATGCACACAACCTACCCAGATGGTGTTGAAGTTGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097403.4 |
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| CDS GCA 72 bp | GACAGTGGTTCTGGTGACATTCTGCCGAAGCTTCTTTaGAGAAATTTGGAAGACATGTGTATAACCTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: DSGSGDILPKLL*RNLEDMCITFS Trigger: TGAAAAGGTTATACACATGTCTTCCAAATTTCTGCAAAGAAGCTTCGGCAGAATGTCACCAGAACCACTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097403.4 ENSMUST00000233884.2 |
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| CDS CAA 72 bp | AACTTCAACACCATCTGGGTAGGTTGTGTGCATTGTTaGTGCGTCCGCATAATAATAAATCGCTTTCTGATC | + |
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Preference number: 6 (lower is better) Translates to: NFNTIWVGCVHC*CVRIIINRFLI Trigger: GATCAGAAAGCGATTTATTATTATGCGGACGCACAAACAATGCACACAACCTACCCAGATGGTGTTGAAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097403.4 |
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