Pregenerated sensors for TCP10B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055602Ensembl transcript IDs: ENSMUST00000086787.11, ENSMUST00000116666.8, ENSMUST00000163227.3, ENSMUST00000232990.2, ENSMUST00000233511.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCACGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTCTaGCCTCTCTCCCAAGATGGTGGTGGCTACATGGTCTCTTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: PRKPCPGPHFWLLLL*PLSQDGGGYMVSFF Trigger: AAAGAAAGAGACCATGTAGCCACCACCATCTTGGGAGAGAGGTCAGAGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| 3UTR CCA 90 bp | GGCTACTGCTTCTCTGACCTCTCTCCCAAGATGGTGGTGGCTACATaGTCTCTTTCTTTACAATTTTTGGATGTCTCTTTACTCCTCATG | + |
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Preference number: 1 (lower is better) Translates to: GYCFSDLSPKMVVAT*SLSLQFLDVSLLLM Trigger: CATGAGGAGTAAAGAGACATCCAAAAATTGTAAAGAAAGAGACCATGTAGCCACCACCATCTTGGGAGAGAGGTCAGAGAAGCAGTAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| 3UTR CCA 90 bp | TCATTTCTGGCTACTGCTTCTCTGACCTCTCTCCCAAGATGGTGGTaGCTACATGGTCTCTTTCTTTACAATTTTTGGATGTCTCTTTAC | + |
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Preference number: 1 (lower is better) Translates to: SFLATASLTSLPRWW*LHGLFLYNFWMSLY Trigger: GTAAAGAGACATCCAAAAATTGTAAAGAAAGAGACCATGTAGCCACCACCATCTTGGGAGAGAGGTCAGAGAAGCAGTAGCCAGAAATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGGAAATGAGGGGGCAGCAGGGCAGACTCACAGGAACAGATAGGAGGTGTCTCCCAGGAACTAGCTaGCAGTGGTCACGTTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: SQEMRGQQGRLTGTDRRCLPGTS*QWSRCS Trigger: GGAGCAACGTGACCACTGCCAGCTAGTTCCTGGGAG...ACACCTCCTATCTGTTCCTGTGAGTCTGCCCTGCTGCCCCCTCATTTCCTGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086787.11 |
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| 3UTR-3UTR CCA 90 bp | TCCGACAGAAGGCATGGTCTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCACTCCCAAGATGGTGGTaGCTACATGGTCTCTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: SDRRHGLDKATEAMSRTSLPRWW*LHGLFL Trigger: AAGAAAGAGACCATGTAGCCACCACCATCTTGGGAG...TGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAGACCATGCCTTCTGTCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| 3UTR-3UTR CCA 90 bp | CGACAGAAGGCATGGTCTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTCTCCCAAGATGGTGGTaGCTACATGGTCTCTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: RQKAWSGQGHGSHVQDLILPRWW*LHGLFL Trigger: AAGAAAGAGACCATGTAGCCACCACCATCTTGGGAG...AATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAGACCATGCCTTCTGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| 3UTR-3UTR CCA 90 bp | GGGATAGAAGTAGATGCAGGCAGGTGTTGGCCAAGCAAAAACACAGAGCCAGCTACAGAAGGCATGGTCTaGACAAGGCCACGGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: GIEVDAGRCWPSKNTEPATEGMV*TRPRKP Trigger: TGGCTTCCGTGGCCTTGTCCAGACCATGCCTTCTGT...AGCTGGCTCTGTGTTTTTGCTTGGCCAACACCTGCCTGCATCTACTTCTATCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086787.11 ENSMUST00000232990.2 |
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| 3UTR-3UTR CCA 90 bp | GATAGAAGTAGATGCAGGCAGGTGTTGGCCAAGCAAAAACACAGAGCCAGCTGTCTCCCAGGAACTAGCTaGCAGTGGTCACGTTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: DRSRCRQVLAKQKHRASCLPGTS*QWSRCS Trigger: GGAGCAACGTGACCACTGCCAGCTAGTTCCTGGGAG...ACAGCTGGCTCTGTGTTTTTGCTTGGCCAACACCTGCCTGCATCTACTTCTATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086787.11 ENSMUST00000232990.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGCATGGTCTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGTCTCTCCCAAGATGGTaGTGGCTACATGGTCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: RRHGLDKATEAMSRTSFLSLPRW*WLHGLF Trigger: AAAGAGACCATGTAGCCACCACCATCTTGGGAGAGA...CAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAGACCATGCCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| 3UTR-3UTR CCA 90 bp | AACACAGAGCCAGCTGTTGTTAACGGCTGCTCCCAGGAACTAGCTGGCAGTGGTTCTCTCCCAAGATGGTaGTGGCTACATGGTCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: NTEPAVVNGCSQELAGSGSLPRW*WLHGLF Trigger: AAAGAGACCATGTAGCCACCACCATCTTGGGAGAGA...ACCACTGCCAGCTAGTTCCTGGGAGCAGCCGTTAACAACAGCTGGCTCTGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| 3UTR-3UTR CCA 90 bp | GGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTCTTCTCTCCCAAGATGGTaGTGGCTACATGGTCTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: GQGHGSHVQDLISGYCFSSLPRW*WLHGLF Trigger: AAAGAGACCATGTAGCCACCACCATCTTGGGAGAGA...AGAGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTACTATATTTGGAGATTaGAGCCTACTGCCTGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: LDKATEAMSRTSFLATASTIFGD*SLLPGL Trigger: AAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGT...AGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGATGCAGGCAGGTGTTGGCCAAGCAAAAACACAGAGCCAGCTGTTGTTAACGGAACTAGCTGGCAGTaGTCACGTTGCTCCCATTGT | + |
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Preference number: 2 (lower is better) Translates to: VDAGRCWPSKNTEPAVVNGTSWQ*SRCSHC Trigger: ACAATGGGAGCAACGTGACCACTGCCAGCTAGTTCC...GTTAACAACAGCTGGCTCTGTGTTTTTGCTTGGCCAACACCTGCCTGCATCTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086787.11 ENSMUST00000232990.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAGCAAAAACACAGAGCCAGCTGTTGTTAACGGCTGCTCCCAGGAACTAGCTCTCCCAAGATGGTGGTaGCTACATGGTCTCTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: PSKNTEPAVVNGCSQELALPRWW*LHGLFL Trigger: AAGAAAGAGACCATGTAGCCACCACCATCTTGGGAG...AGCTAGTTCCTGGGAGCAGCCGTTAACAACAGCTGGCTCTGTGTTTTTGCTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| 3UTR-3UTR CCA 90 bp | GGGATAGAAGTAGATGCAGGCAGGTGTTGGCCAAGCAAAAACACAGAGCCAGCTACTATATTTGGAGATTaGAGCCTACTGCCTGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: GIEVDAGRCWPSKNTEPATIFGD*SLLPGL Trigger: AAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGT...AGCTGGCTCTGTGTTTTTGCTTGGCCAACACCTGCCTGCATCTACTTCTATCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086787.11 ENSMUST00000232990.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTATGGTGGTGGCTACATaGTCTCTTTCTTTACAATTT | + |
|
Preference number: 2 (lower is better) Translates to: LDKATEAMSRTSFLATASMVVAT*SLSLQF Trigger: AAATTGTAAAGAAAGAGACCATGTAGCCACCACCAT...AGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGCATGGTCTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGATGGTGGTGGCTACATaGTCTCTTTCTTTACAATTT | + |
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Preference number: 2 (lower is better) Translates to: RRHGLDKATEAMSRTSFLMVVAT*SLSLQF Trigger: AAATTGTAAAGAAAGAGACCATGTAGCCACCACCAT...CAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAGACCATGCCTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGAACAGATAGGAGGTGTGGCCCACTATGTTTCTGTCTTTGTTTTTATCTGTACTATATTTGGAGATTaGAGCCTACTGCCTGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: QEQIGGVAHYVSVFVFICTIFGD*SLLPGL Trigger: AAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGT...ACAGATAAAAACAAAGACAGAAACATAGTGGGCCACACCTCCTATCTGTTCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086787.11 |
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| 3UTR GCA 72 bp | CGGCTGCTCCCAGGAACTAGCTGGCAGTGGTCACGTTaGTCCCATTGTACCCTCTGCTCTAGGGCCAGACTC | + |
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Preference number: 3 (lower is better) Translates to: RLLPGTSWQWSR*SHCTLCSRARL Trigger: GAGTCTGGCCCTAGAGCAGAGGGTACAATGGGAGCAACGTGACCACTGCCAGCTAGTTCCTGGGAGCAGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| 3UTR GCA 72 bp | CCAAGCAAAAACACAGAGCCAGCTGTTGTTAACGGCTaGTCCCAGGAACTAGCTGGCAGTGGTCACGTTGCT | + |
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Preference number: 3 (lower is better) Translates to: PSKNTEPAVVNG*SQELAGSGHVA Trigger: AGCAACGTGACCACTGCCAGCTAGTTCCTGGGAGCAGCCGTTAACAACAGCTGGCTCTGTGTTTTTGCTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| 3UTR CCA 72 bp | CTGGCTACTGCTTCTCTGACCTCTCTCCCAAGATGGTaGTGGCTACATGGTCTCTTTCTTTACAATTTTTGG | + |
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Preference number: 3 (lower is better) Translates to: LATASLTSLPRW*WLHGLFLYNFW Trigger: CCAAAAATTGTAAAGAAAGAGACCATGTAGCCACCACCATCTTGGGAGAGAGGTCAGAGAAGCAGTAGCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| 3UTR CCA 72 bp | TTTCTGGCTACTGCTTCTCTGACCTCTCTCCCAAGATaGTGGTGGCTACATGGTCTCTTTCTTTACAATTTT | + |
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Preference number: 3 (lower is better) Translates to: FLATASLTSLPR*WWLHGLFLYNF Trigger: AAAATTGTAAAGAAAGAGACCATGTAGCCACCACCATCTTGGGAGAGAGGTCAGAGAAGCAGTAGCCAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| 3UTR CCA 72 bp | GAATGCCACATGAGGTTCTGTCTAGACACTTCAGGATaGTTAAATCAAGTCTATTCATACATCAGGCACCAG | + |
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Preference number: 3 (lower is better) Translates to: ECHMRFCLDTSG*LNQVYSYIRHQ Trigger: CTGGTGCCTGATGTATGAATAGACTTGATTTAACCATCCTGAAGTGTCTAGACAGAACCTCATGTGGCATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086787.11 |
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| CDS-3UTR TCA 90 bp | TCCGACAGAAGGCATGGTCTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATGCTGTCTTCCTCAGTaGTCTGGGCTGTGCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SDRRHGLDKATEAMSRTSCCLPQ*SGLCSP Trigger: TGGAGAGCACAGCCCAGATCACTGAGGAAGACAGCA...TGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAGACCATGCCTTCTGTCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| CDS-3UTR CCA 90 bp | TCCGACAGAAGGCATGGTCTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCAAGCCTATACAGGCTTTaGTGGCCTCCGCATCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SDRRHGLDKATEAMSRTSSLYRL*WPPHPA Trigger: AGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCT...TGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAGACCATGCCTTCTGTCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| CDS-3UTR TCA 90 bp | CGACAGAAGGCATGGTCTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTGCTGTCTTCCTCAGTaGTCTGGGCTGTGCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RQKAWSGQGHGSHVQDLICCLPQ*SGLCSP Trigger: TGGAGAGCACAGCCCAGATCACTGAGGAAGACAGCA...AATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAGACCATGCCTTCTGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| CDS-3UTR TCA 90 bp | TGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTCTGCTGTCTTCCTCAGTaGTCTGGGCTGTGCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: WTRPRKPCPGPHFWLLLLCCLPQ*SGLCSP Trigger: TGGAGAGCACAGCCCAGATCACTGAGGAAGACAGCA...GAGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| CDS-3UTR TCA 90 bp | CGACAGAAGGCATGGTCTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTCGAAGTCTCTGGATTTaGGGACCAGATGTCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: RQKAWSGQGHGSHVQDLIRSLWI*GPDVSQ Trigger: CTGGCTGACATCTGGTCCTCAAATCCAGAGACTTCG...AATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAGACCATGCCTTCTGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| CDS-3UTR TCA 90 bp | TCCGACAGAAGGCATGGTCTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCAATGACCCTGCTTGCTTaGGCATGCAGGAGAAGTTCA | + |
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Preference number: 4 (lower is better) Translates to: SDRRHGLDKATEAMSRTSMTLLA*ACRRSS Trigger: TGAACTTCTCCTGCATGCTCAAGCAAGCAGGGTCAT...TGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAGACCATGCCTTCTGTCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| CDS-3UTR GCA 90 bp | AGAAGGCATGGTCTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGACACTGGCAGAGTGTTaGTTGCTCTTGCTGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RRHGLDKATEAMSRTSFLTLAEC*LLLLGW Trigger: CCACCCCAGCAAGAGCAAGCAACACTCTGCCAGTGT...CAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAGACCATGCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| CDS-3UTR CCA 90 bp | GGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTCTAGCCTATACAGGCTTTaGTGGCCTCCGCATCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: GQGHGSHVQDLISGYCFSSLYRL*WPPHPA Trigger: AGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCT...AGAGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| CDS-3UTR CCA 90 bp | TCCGACAGAAGGCATGGTCTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCACTTGGTGGTGCCATCTaGGAATTCCTTCCGCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: SDRRHGLDKATEAMSRTSLGGAI*EFLPLE Trigger: TTCAAGCGGAAGGAATTCCCAGATGGCACCACCAAG...TGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAGACCATGCCTTCTGTCGGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| CDS-3UTR TCA 90 bp | GGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTCTCCAGATGTCAGCCAGTaGCTCTGTGTCCAGGAATGT | + |
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Preference number: 4 (lower is better) Translates to: GQGHGSHVQDLISGYCFSPDVSQ*LCVQEC Trigger: ACATTCCTGGACACAGAGTCACTGGCTGACATCTGG...AGAGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| CDS-3UTR TCA 90 bp | AGAAGGCATGGTCTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGCCAGATGTCAGCCAGTaGCTCTGTGTCCAGGAATGT | + |
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Preference number: 4 (lower is better) Translates to: RRHGLDKATEAMSRTSFLPDVSQ*LCVQEC Trigger: ACATTCCTGGACACAGAGTCACTGGCTGACATCTGG...CAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAGACCATGCCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| CDS-3UTR TCA 90 bp | TGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTCCGAAGTCTCTGGATTTaGGGACCAGATGTCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: WTRPRKPCPGPHFWLLLLRSLWI*GPDVSQ Trigger: CTGGCTGACATCTGGTCCTCAAATCCAGAGACTTCG...GAGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| CDS-3UTR TCA 90 bp | CGACAGAAGGCATGGTCTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTTCTTGTCAGCACTaGTCTCCTTCCTGGTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: RQKAWSGQGHGSHVQDLISSCQH*SPSWFH Trigger: ATGGAACCAGGAAGGAGATCAGTGCTGACAAGAAGA...AATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAGACCATGCCTTCTGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 |
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| CDS-3UTR GCA 90 bp | TGTTGGCCAAGCAAAAACACAGAGCCAGCTGTTGTTAACGGCTGCTCCCAGGAAACACTGGCAGAGTGTTaGTTGCTCTTGCTGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: CWPSKNTEPAVVNGCSQETLAEC*LLLLGW Trigger: CCACCCCAGCAAGAGCAAGCAACACTCTGCCAGTGT...TTCCTGGGAGCAGCCGTTAACAACAGCTGGCTCTGTGTTTTTGCTTGGCCAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| CDS-3UTR CCA 90 bp | TCCCAGGAAATGAGGGGGCAGCAGGGCAGACTCACAGGAACAGATAGGAGGTGTCACCCACAGTGCATTTaGGGAAAAACAAGGGATGAC | + |
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Preference number: 4 (lower is better) Translates to: SQEMRGQQGRLTGTDRRCHPQCI*GKTRDD Trigger: GTCATCCCTTGTTTTTCCCCAAATGCACTGTGGGTG...ACACCTCCTATCTGTTCCTGTGAGTCTGCCCTGCTGCCCCCTCATTTCCTGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000086787.11 |
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| CDS-3UTR CCA 90 bp | TCCGACAGAAGGCATGGTCTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCACACTTCAACACCATCTaGGTAGGTTGTGTGCATTGT | + |
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Preference number: 4 (lower is better) Translates to: SDRRHGLDKATEAMSRTSHFNTI*VGCVHC Trigger: ACAATGCACACAACCTACCCAGATGGTGTTGAAGTG...TGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAGACCATGCCTTCTGTCGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| CDS-3UTR CCA 90 bp | CTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTCTTGGTGGTGCCATCTaGGAATTCCTTCCGCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: LDKATEAMSRTSFLATASLGGAI*EFLPLE Trigger: TTCAAGCGGAAGGAATTCCCAGATGGCACCACCAAG...AGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| CDS-3UTR TCA 90 bp | AGAAGGCATGGTCTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGATCTCTTTCATCCCATaGGGTTGTCCTCTCGGAATC | + |
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Preference number: 4 (lower is better) Translates to: RRHGLDKATEAMSRTSFLISFIP*GCPLGI Trigger: GATTCCGAGAGGACAACCTCATGGGATGAAAGAGAT...CAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAGACCATGCCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| CDS-3UTR TCA 90 bp | CCAAGCAAAAACACAGAGCCAGCTGTTGTTAACGGCTGCTCCCAGGAACTAGCTCCAGATGTCAGCCAGTaGCTCTGTGTCCAGGAATGT | + |
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Preference number: 4 (lower is better) Translates to: PSKNTEPAVVNGCSQELAPDVSQ*LCVQEC Trigger: ACATTCCTGGACACAGAGTCACTGGCTGACATCTGG...AGCTAGTTCCTGGGAGCAGCCGTTAACAACAGCTGGCTCTGTGTTTTTGCTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| CDS-3UTR TCA 90 bp | GGGATAGAAGTAGATGCAGGCAGGTGTTGGCCAAGCAAAAACACAGAGCCAGCTCGAAGTCTCTGGATTTaGGGACCAGATGTCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GIEVDAGRCWPSKNTEPARSLWI*GPDVSQ Trigger: CTGGCTGACATCTGGTCCTCAAATCCAGAGACTTCG...AGCTGGCTCTGTGTTTTTGCTTGGCCAACACCTGCCTGCATCTACTTCTATCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086787.11 ENSMUST00000232990.2 |
||
| CDS-3UTR TCA 90 bp | CTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTTCTTCTTGTCAGCACTaGTCTCCTTCCTGGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LDKATEAMSRTSFLATASSSCQH*SPSWFH Trigger: ATGGAACCAGGAAGGAGATCAGTGCTGACAAGAAGA...AGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 |
||
| CDS-3UTR TCA 90 bp | AACACAGAGCCAGCTGTTGTTAACGGCTGCTCCCAGGAACTAGCTGGCAGTGGTACTTCCAGTCCAGGATaGCAGTTCCCTTCTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: NTEPAVVNGCSQELAGSGTSSPG*QFPSHL Trigger: AAGATGAGAAGGGAACTGTCATCCTGGACTGGAAGT...ACCACTGCCAGCTAGTTCCTGGGAGCAGCCGTTAACAACAGCTGGCTCTGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
||
| CDS-3UTR CCA 90 bp | CGACAGAAGGCATGGTCTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCCTCTTCTCATGGTTaGACCCTTTTCCTTGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQKAWSGQGHGSHVQDLISSSHG*TLFLDS Trigger: TGAGTCAAGGAAAAGGGTCCAACCATGAGAAGAGGA...AATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAGACCATGCCTTCTGTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
||
| CDS-3UTR CCA 90 bp | GGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTCTCACCCACAGTGCATTTaGGGAAAAACAAGGGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: GQGHGSHVQDLISGYCFSHPQCI*GKTRDD Trigger: GTCATCCCTTGTTTTTCCCCAAATGCACTGTGGGTG...AGAGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
||
| CDS-3UTR CCA 90 bp | CTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTCACCCACAGTGCATTTaGGGAAAAACAAGGGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LDKATEAMSRTSFLATASHPQCI*GKTRDD Trigger: GTCATCCCTTGTTTTTCCCCAAATGCACTGTGGGTG...AGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGCAAAAACACAGAGCCAGCTGTTGTTAACGGCTGCTCCCAGGAACTAGCTATGACCCTGCTTGCTTaGGCATGCAGGAGAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSKNTEPAVVNGCSQELAMTLLA*ACRRSS Trigger: TGAACTTCTCCTGCATGCTCAAGCAAGCAGGGTCAT...AGCTAGTTCCTGGGAGCAGCCGTTAACAACAGCTGGCTCTGTGTTTTTGCTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
||
| CDS-3UTR TCA 90 bp | GGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTCTCTTTCTGATCGGACTTaGTCTTCTTCATGTCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: GQGHGSHVQDLISGYCFSLSDRT*SSSCHR Trigger: ACGGTGACATGAAGAAGATCAAGTCCGATCAGAAAG...AGAGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 |
||
| CDS-3UTR TCA 90 bp | TGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTCCTTTCTGATCGGACTTaGTCTTCTTCATGTCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: WTRPRKPCPGPHFWLLLLLSDRT*SSSCHR Trigger: ACGGTGACATGAAGAAGATCAAGTCCGATCAGAAAG...GAGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 |
||
| CDS-3UTR CCA 90 bp | TGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTCTCCTCTTCTCATGGTTaGACCCTTTTCCTTGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: WTRPRKPCPGPHFWLLLLSSSHG*TLFLDS Trigger: TGAGTCAAGGAAAAGGGTCCAACCATGAGAAGAGGA...GAGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
||
| CDS-3UTR CCA 90 bp | GGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTCTCATTGTGCTTCTGTTTaGAGGACTTCCAGAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQGHGSHVQDLISGYCFSHCASV*RTSRKL Trigger: GAGCTTTCTGGAAGTCCTCCAAACAGAAGCACAATG...AGAGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGGCATGGTCTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGCATTGTGCTTCTGTTTaGAGGACTTCCAGAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RRHGLDKATEAMSRTSFLHCASV*RTSRKL Trigger: GAGCTTTCTGGAAGTCCTCCAAACAGAAGCACAATG...CAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAGACCATGCCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
||
| CDS-3UTR CCA 90 bp | CTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTCACTTCAACACCATCTaGGTAGGTTGTGTGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: LDKATEAMSRTSFLATASHFNTI*VGCVHC Trigger: ACAATGCACACAACCTACCCAGATGGTGTTGAAGTG...AGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGCAAAAACACAGAGCCAGCTGTTGTTAACGGCTGCTCCCAGGAACTAGCTCTTGGTGGTGCCATCTaGGAATTCCTTCCGCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSKNTEPAVVNGCSQELALGGAI*EFLPLE Trigger: TTCAAGCGGAAGGAATTCCCAGATGGCACCACCAAG...AGCTAGTTCCTGGGAGCAGCCGTTAACAACAGCTGGCTCTGTGTTTTTGCTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGCAAAAACACAGAGCCAGCTGTTGTTAACGGCTGCTCCCAGGAACTAGCTATCTCTTTCATCCCATaGGGTTGTCCTCTCGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: PSKNTEPAVVNGCSQELAISFIP*GCPLGI Trigger: GATTCCGAGAGGACAACCTCATGGGATGAAAGAGAT...AGCTAGTTCCTGGGAGCAGCCGTTAACAACAGCTGGCTCTGTGTTTTTGCTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
||
| CDS-3UTR TCA 90 bp | GATAGAAGTAGATGCAGGCAGGTGTTGGCCAAGCAAAAACACAGAGCCAGCTGTATGACCCTGCTTGCTTaGGCATGCAGGAGAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DRSRCRQVLAKQKHRASCMTLLA*ACRRSS Trigger: TGAACTTCTCCTGCATGCTCAAGCAAGCAGGGTCAT...ACAGCTGGCTCTGTGTTTTTGCTTGGCCAACACCTGCCTGCATCTACTTCTATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086787.11 ENSMUST00000232990.2 |
||
| CDS-3UTR TCA 90 bp | CCAAGCAAAAACACAGAGCCAGCTGTTGTTAACGGCTGCTCCCAGGAACTAGCTACTTCCAGTCCAGGATaGCAGTTCCCTTCTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSKNTEPAVVNGCSQELATSSPG*QFPSHL Trigger: AAGATGAGAAGGGAACTGTCATCCTGGACTGGAAGT...AGCTAGTTCCTGGGAGCAGCCGTTAACAACAGCTGGCTCTGTGTTTTTGCTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
||
| CDS-3UTR TCA 90 bp | TGTTGGCCAAGCAAAAACACAGAGCCAGCTGTTGTTAACGGCTGCTCCCAGGAAACTTCCAGTCCAGGATaGCAGTTCCCTTCTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: CWPSKNTEPAVVNGCSQETSSPG*QFPSHL Trigger: AAGATGAGAAGGGAACTGTCATCCTGGACTGGAAGT...TTCCTGGGAGCAGCCGTTAACAACAGCTGGCTCTGTGTTTTTGCTTGGCCAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
||
| CDS-3UTR CCA 90 bp | GGGATAGAAGTAGATGCAGGCAGGTGTTGGCCAAGCAAAAACACAGAGCCAGCTCACTTCAACACCATCTaGGTAGGTTGTGTGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: GIEVDAGRCWPSKNTEPAHFNTI*VGCVHC Trigger: ACAATGCACACAACCTACCCAGATGGTGTTGAAGTG...AGCTGGCTCTGTGTTTTTGCTTGGCCAACACCTGCCTGCATCTACTTCTATCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086787.11 ENSMUST00000232990.2 |
||
| CDS-3UTR TCA 90 bp | GGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTCTTTCTTTAGGAGCTCTTaGCTTTGTTGGAATATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GQGHGSHVQDLISGYCFSFFRSS*LCWNIL Trigger: CAGAATATTCCAACAAAGTCAAGAGCTCCTAAAGAA...AGAGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGGCATGGTCTGGACAAGGCCACGGAAGCCATGTCCAGGACCTCATTTCTGTTCTTTAGGAGCTCTTaGCTTTGTTGGAATATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRHGLDKATEAMSRTSFLFFRSS*LCWNIL Trigger: CAGAATATTCCAACAAAGTCAAGAGCTCCTAAAGAA...CAGAAATGAGGTCCTGGACATGGCTTCCGTGGCCTTGTCCAGACCATGCCTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| CDS-3UTR CCA 90 bp | GTAGATGCAGGCAGGTGTTGGCCAAGCAAAAACACAGAGCCAGCTGTTGTTAACTCCTCTTCTCATGGTTaGACCCTTTTCCTTGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: VDAGRCWPSKNTEPAVVNSSSHG*TLFLDS Trigger: TGAGTCAAGGAAAAGGGTCCAACCATGAGAAGAGGA...GTTAACAACAGCTGGCTCTGTGTTTTTGCTTGGCCAACACCTGCCTGCATCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086787.11 ENSMUST00000232990.2 |
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| CDS-3UTR TCA 90 bp | TGTTGGCCAAGCAAAAACACAGAGCCAGCTGTTGTTAACGGCTGCTCCCAGGAATTCTTTAGGAGCTCTTaGCTTTGTTGGAATATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CWPSKNTEPAVVNGCSQEFFRSS*LCWNIL Trigger: CAGAATATTCCAACAAAGTCAAGAGCTCCTAAAGAA...TTCCTGGGAGCAGCCGTTAACAACAGCTGGCTCTGTGTTTTTGCTTGGCCAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000232990.2 |
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| CDS-3UTR GCA 90 bp | GATAGAAGTAGATGCAGGCAGGTGTTGGCCAAGCAAAAACACAGAGCCAGCTGTCATAATAATAAATCTTaGCGTTTGGGTGTCGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: DRSRCRQVLAKQKHRASCHNNKS*RLGVAF Trigger: AAAAGCGACACCCAAACGGCAAGATTTATTATTATG...ACAGCTGGCTCTGTGTTTTTGCTTGGCCAACACCTGCCTGCATCTACTTCTATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232990.2 |
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| CDS CCA 90 bp | TGTTGCTTGCTCTTGCTGGGGTGGGTGAGCCTATACAGGCTTTGGTaGCCTCCGCATCCTGCTTCTTCAAGGTCTTCAGCTCCGCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: CCLLLLGWVSLYRLW*PPHPASSRSSAPHG Trigger: TCCGTGCGGAGCTGAAGACCTTGAAGAAGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCTCACCCACCCCAGCAAGAGCAAGCAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 ENSMUST00000233511.2 |
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| CDS CCA 90 bp | GAGTGTTGCTTGCTCTTGCTGGGGTGGGTGAGCCTATACAGGCTTTaGTGGCCTCCGCATCCTGCTTCTTCAAGGTCTTCAGCTCCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ECCLLLLGWVSLYRL*WPPHPASSRSSAPH Trigger: GTGCGGAGCTGAAGACCTTGAAGAAGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCTCACCCACCCCAGCAAGAGCAAGCAACACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 ENSMUST00000233511.2 |
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| CDS TCA 90 bp | ACCCACAGTGCATTTGGGGAAAAACAAGGGATGACCCTGCTTGCTTaGGCATGCAGGAGAAGTTCACCGTCCGAAGTCTCTGGATTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: THSAFGEKQGMTLLA*ACRRSSPSEVSGFE Trigger: CTCAAATCCAGAGACTTCGGACGGTGAACTTCTCCTGCATGCTCAAGCAAGCAGGGTCATCCCTTGTTTTTCCCCAAATGCACTGTGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 |
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| CDS TCA 90 bp | TTGGAATATTCTGCACCCACAGTGCATTTGGGGAAAAACAAGGGATaGCCCTGCTTGCTTGAGCATGCAGGAGAAGTTCACCGTCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LEYSAPTVHLGKNKG*PCLLEHAGEVHRPK Trigger: CTTCGGACGGTGAACTTCTCCTGCATGCTCAAGCAAGCAGGGTCATCCCTTGTTTTTCCCCAAATGCACTGTGGGTGCAGAATATTCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 |
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| CDS GCA 90 bp | GATTTGAGGACCAGATGTCAGCCAGTGACTCTGTGTCCAGGAATGTaGTGTCAGACAGTGGTTCTGGTGACATTCTGCCGAAGCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: DLRTRCQPVTLCPGM*CQTVVLVTFCRSFF Trigger: AAAGAAGCTTCGGCAGAATGTCACCAGAACCACTGTCTGACAGCACATTCCTGGACACAGAGTCACTGGCTGACATCTGGTCCTCAAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 |
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| CDS TCA 90 bp | GCTTCTGTTTGGAGGACTTCCAGAAAGCTCATCTCTTTCATCCCATaGGGTTGTCCTCTCGGAATCAATTCCCTCTATCTTTACGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: ASVWRTSRKLISFIP*GCPLGINSLYLYVH Trigger: GTGTACGTAAAGATAGAGGGAATTGATTCCGAGAGGACAACCTCATGGGATGAAAGAGATGAGCTTTCTGGAAGTCCTCCAAACAGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 |
||
| CDS CCA 90 bp | TGTATAACCTTTTCATCCACAGATGTAAAAGACAACATTTCATCCTaGGAGTCTGTTCCTCCGGTGGCCATTGTGCTTCTGTTTGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CITFSSTDVKDNISS*ESVPPVAIVLLFGG Trigger: TCCTCCAAACAGAAGCACAATGGCCACCGGAGGAACAGACTCCCAGGATGAAATGTTGTCTTTTACATCTGTGGATGAAAAGGTTATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 |
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| CDS GCA 72 bp | GGTGAGCCTATACAGGCTTTGGTGGCCTCCGCATCCTaGTTCTTCAAGGTCTTCAGCTCCGCACGGATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GEPIQALVASAS*FFKVFSSARIS Trigger: GGAGATCCGTGCGGAGCTGAAGACCTTGAAGAAGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 ENSMUST00000233511.2 |
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| CDS CAA 90 bp | AGAGTGTTGCTTGCTCTTGCTGGGGTGGGTGAGCCTATACAGGCTTaGGTGGCCTCCGCATCCTGCTTCTTCAAGGTCTTCAGCTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: RVLLALAGVGEPIQA*VASASCFFKVFSSA Trigger: TGCGGAGCTGAAGACCTTGAAGAAGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCTCACCCACCCCAGCAAGAGCAAGCAACACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 ENSMUST00000233511.2 |
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| CDS CAA 90 bp | ATGAGGGTGGTCTTCTTGTCAGCACTGATCTCCTTCCTGGTTCCATaGGGGAAGGTGATGATGGTTCGCCCGTCGCTGAGCATCCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: MRVVFLSALISFLVP*GKVMMVRPSLSIRS Trigger: GGAGCGGATGCTCAGCGACGGGCGAACCATCATCACCTTCCCCAATGGAACCAGGAAGGAGATCAGTGCTGACAAGAAGACCACCCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 |
||
| CDS CCA 72 bp | CTCTTGCTGGGGTGGGTGAGCCTATACAGGCTTTGGTaGCCTCCGCATCCTGCTTCTTCAAGGTCTTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLLGWVSLYRLW*PPHPASSRSSA Trigger: AGCTGAAGACCTTGAAGAAGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCTCACCCACCCCAGCAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 ENSMUST00000233511.2 |
||
| CDS CAA 72 bp | CTTGCTCTTGCTGGGGTGGGTGAGCCTATACAGGCTTaGGTGGCCTCCGCATCCTGCTTCTTCAAGGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LALAGVGEPIQA*VASASCFFKVF Trigger: GAAGACCTTGAAGAAGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCTCACCCACCCCAGCAAGAGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 ENSMUST00000233511.2 |
||
| CDS CCA 72 bp | TTGCTCTTGCTGGGGTGGGTGAGCCTATACAGGCTTTaGTGGCCTCCGCATCCTGCTTCTTCAAGGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLLLGWVSLYRL*WPPHPASSRSS Trigger: TGAAGACCTTGAAGAAGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCTCACCCACCCCAGCAAGAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 ENSMUST00000233511.2 |
||
| CDS CAA 72 bp | CAGATCTGCTTCTGCAGCCCCACAACCTCATCAAGCTaGCTGTCTTCCTCAGTGATCTGGGCTGTGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: QICFCSPTTSSS*LSSSVIWAVLS Trigger: GGAGAGCACAGCCCAGATCACTGAGGAAGACAGCAAGCTTGATGAGGTTGTGGGGCTGCAGAAGCAGATCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 ENSMUST00000233511.2 |
||
| CDS CAA 72 bp | ATGATGGTTCGCCCGTCGCTGAGCATCCGCTCCACCTaGCCGTTTGGGTGTCGCTTTTCCTTTGTCTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: MMVRPSLSIRST*PFGCRFSFVSS Trigger: TGATGAGACAAAGGAAAAGCGACACCCAAACGGCAAGGTGGAGCGGATGCTCAGCGACGGGCGAACCATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 |
||
| CDS CAA 72 bp | GTCTTCTTGTCAGCACTGATCTCCTTCCTGGTTCCATaGGGGAAGGTGATGATGGTTCGCCCGTCGCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VFLSALISFLVP*GKVMMVRPSLS Trigger: GCTCAGCGACGGGCGAACCATCATCACCTTCCCCAATGGAACCAGGAAGGAGATCAGTGCTGACAAGAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 |
||
| CDS CAA 90 bp | CCAAGGTCACAGATCTGCTTCTGCAGCCCCACAACCTCATCAAGCTaGCTGTCTTCCTCAGTGATCTGGGCTGTGCTCTCCATCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PRSQICFCSPTTSSS*LSSSVIWAVLSIFL Trigger: GAGGAAGATGGAGAGCACAGCCCAGATCACTGAGGAAGACAGCAAGCTTGATGAGGTTGTGGGGCTGCAGAAGCAGATCTGTGACCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 ENSMUST00000233511.2 |
||
| CDS CAA 72 bp | GGGAGTCTGTTCCTCCGGTGGCCATTGTGCTTCTGTTaGGAGGACTTCCAGAAAGCTCATCTCTTTCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: GSLFLRWPLCFC*EDFQKAHLFHP Trigger: GGGATGAAAGAGATGAGCTTTCTGGAAGTCCTCCAAACAGAAGCACAATGGCCACCGGAGGAACAGACTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 |
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| CDS CAA 72 bp | CATGCAGGAGAAGTTCACCGTCCGAAGTCTCTGGATTaGAGGACCAGATGTCAGCCAGTGACTCTGTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: HAGEVHRPKSLD*RTRCQPVTLCP Trigger: TGGACACAGAGTCACTGGCTGACATCTGGTCCTCAAATCCAGAGACTTCGGACGGTGAACTTCTCCTGCATG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 |
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| CDS GCA 72 bp | CAATTCCCTCTATCTTTACGTACACTGGCAGAGTGTTaGTTGCTCTTGCTGGGGTGGGTGAGCCTATACAGG | + |
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Preference number: 6 (lower is better) Translates to: QFPLSLRTLAEC*LLLLGWVSLYR Trigger: CCTGTATAGGCTCACCCACCCCAGCAAGAGCAAGCAACACTCTGCCAGTGTACGTAAAGATAGAGGGAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 |
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| CDS CAA 72 bp | TGCATTTGGGGAAAAACAAGGGATGACCCTGCTTGCTaGAGCATGCAGGAGAAGTTCACCGTCCGAAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: CIWGKTRDDPAC*SMQEKFTVRSL Trigger: GAGACTTCGGACGGTGAACTTCTCCTGCATGCTCAAGCAAGCAGGGTCATCCCTTGTTTTTCCCCAAATGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 |
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| CDS CAA 72 bp | ACATTTCATCCTGGGAGTCTGTTCCTCCGGTGGCCATaGTGCTTCTGTTTGGAGGACTTCCAGAAAGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: TFHPGSLFLRWP*CFCLEDFQKAH Trigger: ATGAGCTTTCTGGAAGTCCTCCAAACAGAAGCACAATGGCCACCGGAGGAACAGACTCCCAGGATGAAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 |
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| CDS CCA 72 bp | AAGACAACATTTCATCCTGGGAGTCTGTTCCTCCGGTaGCCATTGTGCTTCTGTTTGGAGGACTTCCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: KTTFHPGSLFLR*PLCFCLEDFQK Trigger: TTTCTGGAAGTCCTCCAAACAGAAGCACAATGGCCACCGGAGGAACAGACTCCCAGGATGAAATGTTGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 |
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| CDS CCA 72 bp | TTTTCATCCACAGATGTAAAAGACAACATTTCATCCTaGGAGTCTGTTCCTCCGGTGGCCATTGTGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: FSSTDVKDNISS*ESVPPVAIVLL Trigger: CAGAAGCACAATGGCCACCGGAGGAACAGACTCCCAGGATGAAATGTTGTCTTTTACATCTGTGGATGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 |
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| CDS CAA 72 bp | GCACCACTTCAACACCATCTGGGTAGGTTGTGTGCATaGTTTGTGCATCCGCATAATAATAAATCTTGCCGT | + |
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Preference number: 6 (lower is better) Translates to: APLQHHLGRLCA*FVHPHNNKSCR Trigger: ACGGCAAGATTTATTATTATGCGGATGCACAAACAATGCACACAACCTACCCAGATGGTGTTGAAGTGGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232990.2 |
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| CDS GCA 72 bp | TGTGCATTGTTTGTGCATCCGCATAATAATAAATCTTaGCGTTTGGGTGTCGCTTTTCCTTTGTCTCATCAG | + |
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Preference number: 6 (lower is better) Translates to: CALFVHPHNNKS*RLGVAFPLSHQ Trigger: CTGATGAGACAAAGGAAAAGCGACACCCAAACGGCAAGATTTATTATTATGCGGATGCACAAACAATGCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232990.2 |
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| CDS CAA 72 bp | GCACCACTTCAACACCATCTGGGTAGGTTGTGTGCATaGTTTGTGCATCCGCATAATAATAAATCACTTTCT | + |
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Preference number: 6 (lower is better) Translates to: APLQHHLGRLCA*FVHPHNNKSLS Trigger: AGAAAGTGATTTATTATTATGCGGATGCACAAACAATGCACACAACCTACCCAGATGGTGTTGAAGTGGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 |
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| CDS CAA 90 bp | GACAGTGGTTCTGGTGACATTCTGCCGAAGCTTCTTTGCAGAAATTaGGAAGACATGTGTATAACCTTTTCATCCACAGATGTAAAAGAC | + |
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Preference number: 6 (lower is better) Translates to: DSGSGDILPKLLCRN*EDMCITFSSTDVKD Trigger: GTCTTTTACATCTGTGGATGAAAAGGTTATACACATGTCTTCCAAATTTCTGCAAAGAAGCTTCGGCAGAATGTCACCAGAACCACTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 |
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| CDS GCA 72 bp | TTCAACACCATCTGGGTAGGTTGTGTGCATTGTTTGTaGATCCGCATAATAATAAATCACTTTCTGATCGGA | + |
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Preference number: 6 (lower is better) Translates to: FNTIWVGCVHCL*IRIIINHFLIG Trigger: TCCGATCAGAAAGTGATTTATTATTATGCGGATGCACAAACAATGCACACAACCTACCCAGATGGTGTTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 |
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| CDS CAA 72 bp | TCTGGTGACATTCTGCCGAAGCTTCTTTGCAGAAATTaGGAAGACATGTGTATAACCTTTTCATCCACAGAT | + |
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Preference number: 6 (lower is better) Translates to: SGDILPKLLCRN*EDMCITFSSTD Trigger: ATCTGTGGATGAAAAGGTTATACACATGTCTTCCAAATTTCTGCAAAGAAGCTTCGGCAGAATGTCACCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 ENSMUST00000232990.2 |
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| CDS CAA 72 bp | CACTTCAACACCATCTGGGTAGGTTGTGTGCATTGTTaGTGCATCCGCATAATAATAAATCACTTTCTGATC | + |
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Preference number: 6 (lower is better) Translates to: HFNTIWVGCVHC*CIRIIINHFLI Trigger: GATCAGAAAGTGATTTATTATTATGCGGATGCACAAACAATGCACACAACCTACCCAGATGGTGTTGAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086787.11 ENSMUST00000116666.8 ENSMUST00000163227.3 |
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