Pregenerated sensors for TCP10A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071322Ensembl transcript IDs: ENSMUST00000095726.11, ENSMUST00000128533.8, ENSMUST00000129709.8, ENSMUST00000138222.8, ENSMUST00000140192.8, ENSMUST00000144861.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CCACAGAAGCCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTCTaGCCTCTCTCCCAAGATGGTGGTGGCTACATGGTCTCTTTCTTT | + |
Preference number: 1 (lower is better) Translates to: PQKPCPGPHFWLLLL*PLSQDGGGYMVSFF Trigger: AAAGAAAGAGACCATGTAGCCACCACCATCTTGGGAGAGAGGTCAGAGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGGCTTCTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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3UTR GCA 90 bp | AGAACTCCTCATCAGTGTAAGGACTGGAAGATTGAGATTGGTGGCTaGCTAGTAGCTAGGGAGGAATCTCTCCTACAGCATGGCAGAGTG | + |
Preference number: 1 (lower is better) Translates to: RTPHQCKDWKIEIGG*LVAREESLLQHGRV Trigger: CACTCTGCCATGCTGTAGGAGAGATTCCTCCCTAGCTACTAGGCAGCCACCAATCTCAATCTTCCAGTCCTTACACTGATGAGGAGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095726.11 |
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3UTR-3UTR CCA 90 bp | TCCCAGGAACTAGCTGGCAGTGGTCACGTTGCTCCCATTGTACCCTCTGCTCTAACAGAAGGCATGGTCTaGACAAGGCCACAGAAGCCA | + |
Preference number: 2 (lower is better) Translates to: SQELAGSGHVAPIVPSALTEGMV*TRPQKP Trigger: TGGCTTCTGTGGCCTTGTCCAGACCATGCCTTCTGT...TAGAGCAGAGGGTACAATGGGAGCAACGTGACCACTGCCAGCTAGTTCCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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3UTR-3UTR GCA 90 bp | ATTGAGATTGGTGGCTGCCTAGTAGCTAGGGAGGAATCTCTCCTACAGCATGGCCTCATTTCTGGCTACTaGTTCTCTGACCTCTCTCCC | + |
Preference number: 2 (lower is better) Translates to: IEIGGCLVAREESLLQHGLISGY*FSDLSP Trigger: GGGAGAGAGGTCAGAGAAGCAGTAGCCAGAAATGAG...GCCATGCTGTAGGAGAGATTCCTCCCTAGCTACTAGGCAGCCACCAATCTCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095726.11 |
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3UTR CAA 90 bp | CAAGGGAATCGTGAGTCGCTTTGTCTGTTTTGGTCAAAACTATATTaGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGGATGCA | + |
Preference number: 2 (lower is better) Translates to: QGNRESLCLFWSKLY*EIGAYCLALSLLDA Trigger: TGCATCCAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGACAAAGCGACTCACGATTCCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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3UTR GCA 72 bp | CCAAGCAAAAACACGGAGCCAGCTGTTGTTAACGGCTaGTCCCAGGAACTAGCTGGCAGTGGTCACGTTGCT | + |
Preference number: 3 (lower is better) Translates to: PSKNTEPAVVNG*SQELAGSGHVA Trigger: AGCAACGTGACCACTGCCAGCTAGTTCCTGGGAGCAGCCGTTAACAACAGCTGGCTCCGTGTTTTTGCTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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3UTR TCA 72 bp | CCATGTCCAGGACCTCATTTCTGGCTACTGCTTCTCTaGCCTCTCTCCCAAGATGGTGGTGGCTACATGGTC | + |
Preference number: 3 (lower is better) Translates to: PCPGPHFWLLLL*PLSQDGGGYMV Trigger: GACCATGTAGCCACCACCATCTTGGGAGAGAGGTCAGAGAAGCAGTAGCCAGAAATGAGGTCCTGGACATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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3UTR GCA 72 bp | CATCAGTGTAAGGACTGGAAGATTGAGATTGGTGGCTaGCTAGTAGCTAGGGAGGAATCTCTCCTACAGCAT | + |
Preference number: 3 (lower is better) Translates to: HQCKDWKIEIGG*LVAREESLLQH Trigger: ATGCTGTAGGAGAGATTCCTCCCTAGCTACTAGGCAGCCACCAATCTCAATCTTCCAGTCCTTACACTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095726.11 |
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3UTR CCA 72 bp | GCTTTGTCTGTTTTGGTCAAAACTATATTTGGAGATTaGAGCCTACTGCCTGGCCTTGAGTCTGTTGGATGC | + |
Preference number: 3 (lower is better) Translates to: ALSVLVKTIFGD*SLLPGLESVGC Trigger: GCATCCAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGACAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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3UTR TCA 72 bp | TGGTTAAATCAAGTCTATTCATACATCAGGCACCAGTaGAGATACATCCCCCTGGATCCCATTGATGAGGAC | + |
Preference number: 3 (lower is better) Translates to: WLNQVYSYIRHQ*RYIPLDPIDED Trigger: GTCCTCATCAATGGGATCCAGGGGGATGTATCTTCACTGGTGCCTGATGTATGAATAGACTTGATTTAACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095726.11 |
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3UTR CCA 72 bp | GATTGTCAAGGGAATCGTGAGTCGCTTTGTCTGTTTTaGTCAAAACTATATTTGGAGATTGGAGCCTACTGC | + |
Preference number: 3 (lower is better) Translates to: DCQGNRESLCLF*SKLYLEIGAYC Trigger: GCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGACAAAGCGACTCACGATTCCCTTGACAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS-3UTR GCA 90 bp | TCCCAGGAAATGAGGGGGCAGCAGGGCAGACTCACAGGAACAGGTAGGAGGTGTCACTTGTTAGGAAACTaGACCACTTCAACACCATCT | + |
Preference number: 4 (lower is better) Translates to: SQEMRGQQGRLTGTGRRCHLLGN*TTSTPS Trigger: AGATGGTGTTGAAGTGGTGCAGTTTCCTAACAAGTG...ACACCTCCTACCTGTTCCTGTGAGTCTGCCCTGCTGCCCCCTCATTTCCTGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095726.11 |
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CDS-3UTR TCA 90 bp | TGCTCCCAGGAACTAGCTGGCAGTGGTCACGTTGCTCCCATTGTACCCTCTGCTCTTTCTGATTGGACTTaGTCTTCTTCATGTCACCGT | + |
Preference number: 4 (lower is better) Translates to: CSQELAGSGHVAPIVPSALSDWT*SSSCHR Trigger: ACGGTGACATGAAGAAGATCAAGTCCAATCAGAAAG...AGCAGAGGGTACAATGGGAGCAACGTGACCACTGCCAGCTAGTTCCTGGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS-3UTR CCA 90 bp | TCTGTTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGGCATCGATCTGGCTTTaGAGGTGCTGCTTCTTGGCC | + |
Preference number: 4 (lower is better) Translates to: SVLVKTIFGDWSLLPGLEASIWL*RCCFLA Trigger: GGCCAAGAAGCAGCACCTCCAAAGCCAGATCGATGC...CTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138222.8 |
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CDS-3UTR GCA 90 bp | AATTTTTGGATGTCTCTTTACTCCTCATGTGCAGGGGATCTCCAGGATTGTCAAATCTGGCTTTGGAGGTaGTGCTTCTTGGCCTGGCTT | + |
Preference number: 4 (lower is better) Translates to: NFWMSLYSSCAGDLQDCQIWLWR*CFLAWL Trigger: AAGCCAGGCCAAGAAGCAGCACCTCCAAAGCCAGAT...TTGACAATCCTGGAGATCCCCTGCACATGAGGAGTAAAGAGACATCCAAAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138222.8 |
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CDS-3UTR CCA 90 bp | TTACAATTTTTGGATGTCTCTTTACTCCTCATGTGCAGGGGATCTCCAGGATTGTGCTGCTTCTTGGCCTaGCTTACCACAACCTCATCA | + |
Preference number: 4 (lower is better) Translates to: LQFLDVSLLLMCRGSPGLCCFLA*LTTTSS Trigger: TGATGAGGTTGTGGTAAGCCAGGCCAAGAAGCAGCA...CAATCCTGGAGATCCCCTGCACATGAGGAGTAAAGAGACATCCAAAAATTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138222.8 |
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CDS-3UTR CCA 90 bp | TTGTCTGTTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTATCAGAGCATCGATCTaGCTTTGGAGGTGCTGCTTC | + |
Preference number: 4 (lower is better) Translates to: LSVLVKTIFGDWSLLPGLIRASI*LWRCCF Trigger: GAAGCAGCACCTCCAAAGCCAGATCGATGCTCTGAT...AAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138222.8 |
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CDS-3UTR TCA 90 bp | AAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGGATGCCTTTCTGATTGGACTTaGTCTTCTTCATGTCACCGT | + |
Preference number: 4 (lower is better) Translates to: KTIFGDWSLLPGLESVGCLSDWT*SSSCHR Trigger: ACGGTGACATGAAGAAGATCAAGTCCAATCAGAAAG...GCATCCAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR TCA 90 bp | AAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGGATGCACTTTCTGATTGGACTTaGTCTTCTTCATGTCACCGT | + |
Preference number: 4 (lower is better) Translates to: KLYLEIGAYCLALSLLDALSDWT*SSSCHR Trigger: ACGGTGACATGAAGAAGATCAAGTCCAATCAGAAAG...TGCATCCAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR GCA 90 bp | AAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGGATGCCTGCCCAAGCTTCTTTaGAGAAATTTGGAAGACATG | + |
Preference number: 4 (lower is better) Translates to: KTIFGDWSLLPGLESVGCLPKLL*RNLEDM Trigger: CATGTCTTCCAAATTTCTGCAAAGAAGCTTGGGCAG...GCATCCAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR GCA 90 bp | TGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGCTGCCCAAGCTTCTTTaGAGAAATTTGGAAGACATG | + |
Preference number: 4 (lower is better) Translates to: WSKLYLEIGAYCLALSLLLPKLL*RNLEDM Trigger: CATGTCTTCCAAATTTCTGCAAAGAAGCTTGGGCAG...CAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR GCA 90 bp | GTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGGATTTGTTGGAATATTCTaGACCCACAGTGCATTTGGG | + |
Preference number: 4 (lower is better) Translates to: VKTIFGDWSLLPGLESVGFVGIF*THSAFG Trigger: CCCAAATGCACTGTGGGTGCAGAATATTCCAACAAA...TCCAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR GCA 90 bp | TGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGTTTGTTGGAATATTCTaGACCCACAGTGCATTTGGG | + |
Preference number: 4 (lower is better) Translates to: WSKLYLEIGAYCLALSLLFVGIF*THSAFG Trigger: CCCAAATGCACTGTGGGTGCAGAATATTCCAACAAA...CAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR GCA 90 bp | AAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGGATGCGTAGTGTCCGAGGTTTaGTGTATTTCTTTAGGAGCT | + |
Preference number: 4 (lower is better) Translates to: KTIFGDWSLLPGLESVGCVVSEV*CISLGA Trigger: AGCTCCTAAAGAAATACAGCAAACCTCGGACACTAC...GCATCCAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR GCA 90 bp | GTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGGAGTAGTGTCCGAGGTTTaGTGTATTTCTTTAGGAGCT | + |
Preference number: 4 (lower is better) Translates to: VKTIFGDWSLLPGLESVGVVSEV*CISLGA Trigger: AGCTCCTAAAGAAATACAGCAAACCTCGGACACTAC...TCCAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR GCA 90 bp | TGTCTGTTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGCTGCCCAAGCTTCTTTaGAGAAATTTGGAAGACATG | + |
Preference number: 4 (lower is better) Translates to: CLFWSKLYLEIGAYCLALLPKLL*RNLEDM Trigger: CATGTCTTCCAAATTTCTGCAAAGAAGCTTGGGCAG...CAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR GCA 90 bp | TTACAATTTTTGGATGTCTCTTTACTCCTCATGTGCAGGGGATCTCCAGGATTGGTTCTGGTGACATTCTaGCCAAGCTTCTTTGCAGAA | + |
Preference number: 4 (lower is better) Translates to: LQFLDVSLLLMCRGSPGLVLVTF*PSFFAE Trigger: TTCTGCAAAGAAGCTTGGGCAGAATGTCACCAGAAC...CAATCCTGGAGATCCCCTGCACATGAGGAGTAAAGAGACATCCAAAAATTGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS-3UTR GCA 90 bp | TTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTTGTTGGAATATTCTaGACCCACAGTGCATTTGGG | + |
Preference number: 4 (lower is better) Translates to: FWSKLYLEIGAYCLALSLFVGIF*THSAFG Trigger: CCCAAATGCACTGTGGGTGCAGAATATTCCAACAAA...CAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR GCA 90 bp | TCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGGATCACTTGTTAGGAAACTaGACCACTTCAACACCATCT | + |
Preference number: 4 (lower is better) Translates to: SKLYLEIGAYCLALSLLDHLLGN*TTSTPS Trigger: AGATGGTGTTGAAGTGGTGCAGTTTCCTAACAAGTG...ATCCAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR GCA 90 bp | CAATTTTTGGATGTCTCTTTACTCCTCATGTGCAGGGGATCTCCAGGATTGTCACACTTGTTAGGAAACTaGACCACTTCAACACCATCT | + |
Preference number: 4 (lower is better) Translates to: QFLDVSLLLMCRGSPGLSHLLGN*TTSTPS Trigger: AGATGGTGTTGAAGTGGTGCAGTTTCCTAACAAGTG...TGACAATCCTGGAGATCCCCTGCACATGAGGAGTAAAGAGACATCCAAAAATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS-3UTR GCA 90 bp | TTGTCTGTTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTTTTGTTGGAATATTCTaGACCCACAGTGCATTTGGG | + |
Preference number: 4 (lower is better) Translates to: LSVLVKTIFGDWSLLPGLFVGIF*THSAFG Trigger: CCCAAATGCACTGTGGGTGCAGAATATTCCAACAAA...AAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR GCA 90 bp | TGTGTGAATTTATGGGATAGAATGCCACATGAGGTTCTGTCTAGACACTTCAGGGTAGTGTCCGAGGTTTaGTGTATTTCTTTAGGAGCT | + |
Preference number: 4 (lower is better) Translates to: CVNLWDRMPHEVLSRHFRVVSEV*CISLGA Trigger: AGCTCCTAAAGAAATACAGCAAACCTCGGACACTAC...CCTGAAGTGTCTAGACAGAACCTCATGTGGCATTCTATCCCATAAATTCACACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095726.11 |
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CDS-3UTR GCA 90 bp | TTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTTTGCCATTTGGGTGTTaGTTTTCCTTTGTCTCATCA | + |
Preference number: 4 (lower is better) Translates to: LVKTIFGDWSLLPGLESVLPFGC*FSFVSS Trigger: TGATGAGACAAAGGAAAAGCAACACCCAAATGGCAA...AACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR GCA 90 bp | CATGGTCTCTTTCTTTACAATTTTTGGATGTCTCTTTACTCCTCATGTGCAGGGGTAGTGTCCGAGGTTTaGTGTATTTCTTTAGGAGCT | + |
Preference number: 4 (lower is better) Translates to: HGLFLYNFWMSLYSSCAGVVSEV*CISLGA Trigger: AGCTCCTAAAGAAATACAGCAAACCTCGGACACTAC...CCCTGCACATGAGGAGTAAAGAGACATCCAAAAATTGTAAAGAAAGAGACCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS-3UTR GCA 90 bp | TTGTCTGTTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTTTGCCATTTGGGTGTTaGTTTTCCTTTGTCTCATCA | + |
Preference number: 4 (lower is better) Translates to: LSVLVKTIFGDWSLLPGLLPFGC*FSFVSS Trigger: TGATGAGACAAAGGAAAAGCAACACCCAAATGGCAA...AAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR GCA 90 bp | TTTGTCTGTTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTTGCCATTTGGGTGTTaGTTTTCCTTTGTCTCATCA | + |
Preference number: 4 (lower is better) Translates to: FVCFGQNYIWRLEPTAWPLPFGC*FSFVSS Trigger: TGATGAGACAAAGGAAAAGCAACACCCAAATGGCAA...AGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR GCA 90 bp | CATGGTCTCTTTCTTTACAATTTTTGGATGTCTCTTTACTCCTCATGTGCAGGGCACTTGTTAGGAAACTaGACCACTTCAACACCATCT | + |
Preference number: 4 (lower is better) Translates to: HGLFLYNFWMSLYSSCAGHLLGN*TTSTPS Trigger: AGATGGTGTTGAAGTGGTGCAGTTTCCTAACAAGTG...CCCTGCACATGAGGAGTAAAGAGACATCCAAAAATTGTAAAGAAAGAGACCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS-3UTR TCA 90 bp | AAAACAAACAAACAAACAAACACCCACATTCTCAGAACTCCTCATCAGTGTAAGCTTTCTGATTGGACTTaGTCTTCTTCATGTCACCGT | + |
Preference number: 4 (lower is better) Translates to: KTNKQTNTHILRTPHQCKLSDWT*SSSCHR Trigger: ACGGTGACATGAAGAAGATCAAGTCCAATCAGAAAG...CTTACACTGATGAGGAGTTCTGAGAATGTGGGTGTTTGTTTGTTTGTTTGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095726.11 |
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CDS-3UTR GCA 90 bp | AAAACAAACAAACAAACAAACACCCACATTCTCAGAACTCCTCATCAGTGTAAGCTGCCCAAGCTTCTTTaGAGAAATTTGGAAGACATG | + |
Preference number: 4 (lower is better) Translates to: KTNKQTNTHILRTPHQCKLPKLL*RNLEDM Trigger: CATGTCTTCCAAATTTCTGCAAAGAAGCTTGGGCAG...CTTACACTGATGAGGAGTTCTGAGAATGTGGGTGTTTGTTTGTTTGTTTGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095726.11 |
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CDS CCA 90 bp | TGTTGCTTGCTCTTGCCGGGGTGGGCGAGCCTATACAGGCTTTGGTaGCCTCCGCATCCTGCTTCTTCAAGGTCTTCAGCTCCGCACGGA | + |
Preference number: 5 (lower is better) Translates to: CCLLLPGWASLYRLW*PPHPASSRSSAPHG Trigger: TCCGTGCGGAGCTGAAGACCTTGAAGAAGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCTCGCCCACCCCGGCAAGAGCAAGCAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS CCA 90 bp | GAGTGTTGCTTGCTCTTGCCGGGGTGGGCGAGCCTATACAGGCTTTaGTGGCCTCCGCATCCTGCTTCTTCAAGGTCTTCAGCTCCGCAC | + |
Preference number: 5 (lower is better) Translates to: ECCLLLPGWASLYRL*WPPHPASSRSSAPH Trigger: GTGCGGAGCTGAAGACCTTGAAGAAGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCTCGCCCACCCCGGCAAGAGCAAGCAACACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS-3UTR CAA 90 bp | TCCCAGGAAATGAGGGGGCAGCAGGGCAGACTCACAGGAACAGGTAGGAGGTGTCCGAAGTCTCTGGATTaGAGGACCAGATGTCAGCCA | + |
Preference number: 5 (lower is better) Translates to: SQEMRGQQGRLTGTGRRCPKSLD*RTRCQP Trigger: TGGCTGACATCTGGTCCTCAAATCCAGAGACTTCGG...ACACCTCCTACCTGTTCCTGTGAGTCTGCCCTGCTGCCCCCTCATTTCCTGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095726.11 |
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CDS-3UTR CAA 90 bp | GGCTGCTCCCAGGAACTAGCTGGCAGTGGTCACGTTGCTCCCATTGTACCCTCTCCGAAGTCTCTGGATTaGAGGACCAGATGTCAGCCA | + |
Preference number: 5 (lower is better) Translates to: GCSQELAGSGHVAPIVPSPKSLD*RTRCQP Trigger: TGGCTGACATCTGGTCCTCAAATCCAGAGACTTCGG...AGAGGGTACAATGGGAGCAACGTGACCACTGCCAGCTAGTTCCTGGGAGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | TGCTCCCAGGAACTAGCTGGCAGTGGTCACGTTGCTCCCATTGTACCCTCTGCTCCGAAGTCTCTGGATTaGAGGACCAGATGTCAGCCA | + |
Preference number: 5 (lower is better) Translates to: CSQELAGSGHVAPIVPSAPKSLD*RTRCQP Trigger: TGGCTGACATCTGGTCCTCAAATCCAGAGACTTCGG...AGCAGAGGGTACAATGGGAGCAACGTGACCACTGCCAGCTAGTTCCTGGGAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS CCA 90 bp | AGCTCCGCACGGATCTCCTGGTTCTCCTTTATCAGAGCATCGATCTaGCTTTGGAGGTGCTGCTTCTTGGCCTGGCTTACCACAACCTCA | + |
Preference number: 5 (lower is better) Translates to: SSARISWFSFIRASI*LWRCCFLAWLTTTS Trigger: TGAGGTTGTGGTAAGCCAGGCCAAGAAGCAGCACCTCCAAAGCCAGATCGATGCTCTGATAAAGGAGAACCAGGAGATCCGTGCGGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138222.8 |
||
CDS CCA 90 bp | TCCGCATCCTGCTTCTTCAAGGTCTTCAGCTCCGCACGGATCTCCTaGTTCTCCTTTATCAGAGCATCGATCTGGCTTTGGAGGTGCTGC | + |
Preference number: 5 (lower is better) Translates to: SASCFFKVFSSARIS*FSFIRASIWLWRCC Trigger: GCAGCACCTCCAAAGCCAGATCGATGCTCTGATAAAGGAGAACCAGGAGATCCGTGCGGAGCTGAAGACCTTGAAGAAGCAGGATGCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | AACGGCTGCTCCCAGGAACTAGCTGGCAGTGGTCACGTTGCTCCCATTGTACCCCACCATCTGGGTAGGTaGTGTGCATTGTTTGTGCAT | + |
Preference number: 5 (lower is better) Translates to: NGCSQELAGSGHVAPIVPHHLGR*CALFVH Trigger: ATGCACAAACAATGCACACAACCTACCCAGATGGTG...GGGTACAATGGGAGCAACGTGACCACTGCCAGCTAGTTCCTGGGAGCAGCCGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS CCA 90 bp | GCACGGATCTCCTGGTTCTCCTTTATCAGAGCATCGATCTGGCTTTaGAGGTGCTGCTTCTTGGCCTGGCTTACCACAACCTCATCAAGC | + |
Preference number: 5 (lower is better) Translates to: ARISWFSFIRASIWL*RCCFLAWLTTTSSS Trigger: GCTTGATGAGGTTGTGGTAAGCCAGGCCAAGAAGCAGCACCTCCAAAGCCAGATCGATGCTCTGATAAAGGAGAACCAGGAGATCCGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | TGCTCCCAGGAACTAGCTGGCAGTGGTCACGTTGCTCCCATTGTACCCTCTGCTGTTGGACCCTTTTCCTaGACTCAGATCCTCCAACAT | + |
Preference number: 5 (lower is better) Translates to: CSQELAGSGHVAPIVPSAVGPFS*TQILQH Trigger: ATGTTGGAGGATCTGAGTCAAGGAAAAGGGTCCAAC...AGCAGAGGGTACAATGGGAGCAACGTGACCACTGCCAGCTAGTTCCTGGGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | AACGGCTGCTCCCAGGAACTAGCTGGCAGTGGTCACGTTGCTCCCATTGTACCCCTTGCCATTTGGGTGTaGCTTTTCCTTTGTCTCATC | + |
Preference number: 5 (lower is better) Translates to: NGCSQELAGSGHVAPIVPLAIWV*LFLCLI Trigger: GATGAGACAAAGGAAAAGCAACACCCAAATGGCAAG...GGGTACAATGGGAGCAACGTGACCACTGCCAGCTAGTTCCTGGGAGCAGCCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS GCA 90 bp | CTGCACCCACAGTGCATTTGGGGAAAAACAAGGGATGACCCTGCTTaGTTGAGCATGCAGGAGAAGTTCACCGTCCGAAGTCTCTGGATT | + |
Preference number: 5 (lower is better) Translates to: LHPQCIWGKTRDDPA*LSMQEKFTVRSLWI Trigger: AATCCAGAGACTTCGGACGGTGAACTTCTCCTGCATGCTCAAGCAAGCAGGGTCATCCCTTGTTTTTCCCCAAATGCACTGTGGGTGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS CCA 90 bp | TGCAGCCCCACAACCTCATCAAGCTTGCTGTCTTCCTCAGTGATCTaGGCTGTGCTCTCCATCTTCCTCTTCTCATGGTTGGACCCTTTT | + |
Preference number: 5 (lower is better) Translates to: CSPTTSSSLLSSSVI*AVLSIFLFSWLDPF Trigger: AAAAGGGTCCAACCATGAGAAGAGGAAGATGGAGAGCACAGCCCAGATCACTGAGGAAGACAGCAAGCTTGATGAGGTTGTGGGGCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS CCA 90 bp | TCCGCATCCTGCTTCTTCAAGGTCTTCAGCTCCGCACGGATCTCCTaGTTCTCCTTTATCAGAGCATCGATCTGGCTTTGGAGGTCTTTG | + |
Preference number: 5 (lower is better) Translates to: SASCFFKVFSSARIS*FSFIRASIWLWRSL Trigger: CAAAGACCTCCAAAGCCAGATCGATGCTCTGATAAAGGAGAACCAGGAGATCCGTGCGGAGCTGAAGACCTTGAAGAAGCAGGATGCGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS CCA 90 bp | GATGATGGTTCGCCCGTCGCTGAGCATCCGCTCCACCTTGCCATTTaGGTGTTGCTTTTCCTTTGTCTCATCAGTCTTTGTAGTGTCCGA | + |
Preference number: 5 (lower is better) Translates to: DDGSPVAEHPLHLAI*VLLFLCLISLCSVR Trigger: TCGGACACTACAAAGACTGATGAGACAAAGGAAAAGCAACACCCAAATGGCAAGGTGGAGCGGATGCTCAGCGACGGGCGAACCATCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 |
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CDS-3UTR CAA 90 bp | TGTTGGCCAAGCAAAAACACGGAGCCAGCTGTTGTTAACGGCTGCTCCCAGGAAGCTCCACCTTGCCATTaGGGTGTTGCTTTTCCTTTG | + |
Preference number: 5 (lower is better) Translates to: CWPSKNTEPAVVNGCSQEAPPCH*GVAFPL Trigger: CAAAGGAAAAGCAACACCCAAATGGCAAGGTGGAGC...TTCCTGGGAGCAGCCGTTAACAACAGCTGGCTCCGTGTTTTTGCTTGGCCAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS GCA 90 bp | GATGATTGTCTTGTGAGCTCTGTCCCAAGGTCACAGATCTGCTTCTaGAGCCCCACAACCTCATCAAGCTTGCTGTCTTCCTCAGTGATC | + |
Preference number: 5 (lower is better) Translates to: DDCLVSSVPRSQICF*SPTTSSSLLSSSVI Trigger: GATCACTGAGGAAGACAGCAAGCTTGATGAGGTTGTGGGGCTGCAGAAGCAGATCTGTGACCTTGGGACAGAGCTCACAAGACAATCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS GCA 90 bp | CACCAAGATGATTGTCTTGTGAGCTCTGTCCCAAGGTCACAGATCTaGTTCTGCAGCCCCACAACCTCATCAAGCTTGCTGTCTTCCTCA | + |
Preference number: 5 (lower is better) Translates to: HQDDCLVSSVPRSQI*FCSPTTSSSLLSSS Trigger: TGAGGAAGACAGCAAGCTTGATGAGGTTGTGGGGCTGCAGAAGCAGATCTGTGACCTTGGGACAGAGCTCACAAGACAATCATCTTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS GCA 90 bp | ATCTCCTGGTTCTCCTTTATCAGAGCATCGATCTGGCTTTGGAGGTaGTGCTTCTTGGCCTGGCTTACCACAACCTCATCAAGCTTGCTG | + |
Preference number: 5 (lower is better) Translates to: ISWFSFIRASIWLWR*CFLAWLTTTSSSLL Trigger: CAGCAAGCTTGATGAGGTTGTGGTAAGCCAGGCCAAGAAGCAGCACCTCCAAAGCCAGATCGATGCTCTGATAAAGGAGAACCAGGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138222.8 |
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CDS CCA 90 bp | TCTCCTTTATCAGAGCATCGATCTGGCTTTGGAGGTGCTGCTTCTTaGCCTGGCTTACCACAACCTCATCAAGCTTGCTGTCTTCCTCAG | + |
Preference number: 5 (lower is better) Translates to: SPLSEHRSGFGGAAS*PGLPQPHQACCLPQ Trigger: CTGAGGAAGACAGCAAGCTTGATGAGGTTGTGGTAAGCCAGGCCAAGAAGCAGCACCTCCAAAGCCAGATCGATGCTCTGATAAAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | AACACGGAGCCAGCTGTTGTTAACGGCTGCTCCCAGGAACTAGCTGGCAGTGGTTCTGCCCAAGCTTCTTaGCAGAAATTTGGAAGACAT | + |
Preference number: 5 (lower is better) Translates to: NTEPAVVNGCSQELAGSGSAQAS*QKFGRH Trigger: ATGTCTTCCAAATTTCTGCAAAGAAGCTTGGGCAGA...ACCACTGCCAGCTAGTTCCTGGGAGCAGCCGTTAACAACAGCTGGCTCCGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | GGGATAGAAGTAGATGCAGGCAGGTGTTGGCCAAGCAAAAACACGGAGCCAGCTCACCATCTGGGTAGGTaGTGTGCATTGTTTGTGCAT | + |
Preference number: 5 (lower is better) Translates to: GIEVDAGRCWPSKNTEPAHHLGR*CALFVH Trigger: ATGCACAAACAATGCACACAACCTACCCAGATGGTG...AGCTGGCTCCGTGTTTTTGCTTGGCCAACACCTGCCTGCATCTACTTCTATCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095726.11 |
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CDS GCA 90 bp | GATTTGAGGACCAGATGTCAGCCAGTGACTCTGTGTCCAGGAATGTaGTGTCAGACAGTGGTTCTGGTGACATTCTGCCCAAGCTTCTTT | + |
Preference number: 5 (lower is better) Translates to: DLRTRCQPVTLCPGM*CQTVVLVTFCPSFF Trigger: AAAGAAGCTTGGGCAGAATGTCACCAGAACCACTGTCTGACAGCACATTCCTGGACACAGAGTCACTGGCTGACATCTGGTCCTCAAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS CCA 90 bp | TGGCTTACCACAACCTCATCAAGCTTGCTGTCTTCCTCAGTGATCTaGGCTGTGCTCTCCATCTTCCTCTTCTCATGGTTGGACCCTTTT | + |
Preference number: 5 (lower is better) Translates to: WLTTTSSSLLSSSVI*AVLSIFLFSWLDPF Trigger: AAAAGGGTCCAACCATGAGAAGAGGAAGATGGAGAGCACAGCCCAGATCACTGAGGAAGACAGCAAGCTTGATGAGGTTGTGGTAAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138222.8 |
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CDS CCA 90 bp | TTTATCAGAGCATCGATCTGGCTTTGGAGGTGCTGCTTCTTGGCCTaGCTTACCACAACCTCATCAAGCTTGCTGTCTTCCTCAGTGATC | + |
Preference number: 5 (lower is better) Translates to: FIRASIWLWRCCFLA*LTTTSSSLLSSSVI Trigger: GATCACTGAGGAAGACAGCAAGCTTGATGAGGTTGTGGTAAGCCAGGCCAAGAAGCAGCACCTCCAAAGCCAGATCGATGCTCTGATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | TCTGGCTACTGCTTCTCTGACCTCTCTCCCAAGATGGTGGTGGCTACATGGTCTGGTAGGTTGTGTGCATaGTTTGTGCATCCGCATAAT | + |
Preference number: 5 (lower is better) Translates to: SGYCFSDLSPKMVVATWSGRLCA*FVHPHN Trigger: ATTATGCGGATGCACAAACAATGCACACAACCTACC...AGACCATGTAGCCACCACCATCTTGGGAGAGAGGTCAGAGAAGCAGTAGCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | AAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGGATGCCCGAAGTCTCTGGATTaGAGGACCAGATGTCAGCCA | + |
Preference number: 5 (lower is better) Translates to: KTIFGDWSLLPGLESVGCPKSLD*RTRCQP Trigger: TGGCTGACATCTGGTCCTCAAATCCAGAGACTTCGG...GCATCCAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | GTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGGAGATGACCCTGCTTGCTaGAGCATGCAGGAGAAGTTC | + |
Preference number: 5 (lower is better) Translates to: VKTIFGDWSLLPGLESVGDDPAC*SMQEKF Trigger: GAACTTCTCCTGCATGCTCAAGCAAGCAGGGTCATC...TCCAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | CAATTTTTGGATGTCTCTTTACTCCTCATGTGCAGGGGATCTCCAGGATTGTCAGATGACCCTGCTTGCTaGAGCATGCAGGAGAAGTTC | + |
Preference number: 5 (lower is better) Translates to: QFLDVSLLLMCRGSPGLSDDPAC*SMQEKF Trigger: GAACTTCTCCTGCATGCTCAAGCAAGCAGGGTCATC...TGACAATCCTGGAGATCCCCTGCACATGAGGAGTAAAGAGACATCCAAAAATTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | TCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGGATGATGACCCTGCTTGCTaGAGCATGCAGGAGAAGTTC | + |
Preference number: 5 (lower is better) Translates to: SKLYLEIGAYCLALSLLDDDPAC*SMQEKF Trigger: GAACTTCTCCTGCATGCTCAAGCAAGCAGGGTCATC...ATCCAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | AAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGGATGCTCCTTCCTGGTTCCATaGGGGAAGGTGATGATGGTT | + |
Preference number: 5 (lower is better) Translates to: KTIFGDWSLLPGLESVGCSFLVP*GKVMMV Trigger: AACCATCATCACCTTCCCCAATGGAACCAGGAAGGA...GCATCCAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | TGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGTCCTTCCTGGTTCCATaGGGGAAGGTGATGATGGTT | + |
Preference number: 5 (lower is better) Translates to: WSKLYLEIGAYCLALSLLSFLVP*GKVMMV Trigger: AACCATCATCACCTTCCCCAATGGAACCAGGAAGGA...CAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | TGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGATGAGGGTGGTCTTCTaGTCAGCACTGATCTCCTTC | + |
Preference number: 5 (lower is better) Translates to: WSKLYLEIGAYCLALSLLMRVVF*SALISF Trigger: GAAGGAGATCAGTGCTGACAAGAAGACCACCCTCAT...CAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | CTCTCTCCCAAGATGGTGGTGGCTACATGGTCTCTTTCTTTACAATTTTTGGATAGCATCGATCTGGCTTaGGAGGTGCTGCTTCTTGGC | + |
Preference number: 5 (lower is better) Translates to: LSPKMVVATWSLSLQFLDSIDLA*EVLLLG Trigger: GCCAAGAAGCAGCACCTCCAAAGCCAGATCGATGCT...ATCCAAAAATTGTAAAGAAAGAGACCATGTAGCCACCACCATCTTGGGAGAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | TGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGGTTGGACCCTTTTCCTaGACTCAGATCCTCCAACAT | + |
Preference number: 5 (lower is better) Translates to: WSKLYLEIGAYCLALSLLVGPFS*TQILQH Trigger: ATGTTGGAGGATCTGAGTCAAGGAAAAGGGTCCAAC...CAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | GGATGTCTCTTTACTCCTCATGTGCAGGGGATCTCCAGGATTGTCAAGGGAATCTCTGCCCAAGCTTCTTaGCAGAAATTTGGAAGACAT | + |
Preference number: 5 (lower is better) Translates to: GCLFTPHVQGISRIVKGISAQAS*QKFGRH Trigger: ATGTCTTCCAAATTTCTGCAAAGAAGCTTGGGCAGA...GATTCCCTTGACAATCCTGGAGATCCCCTGCACATGAGGAGTAAAGAGACATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | TCTGTTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGGCTCCACCTTGCCATTaGGGTGTTGCTTTTCCTTTG | + |
Preference number: 5 (lower is better) Translates to: SVLVKTIFGDWSLLPGLEAPPCH*GVAFPL Trigger: CAAAGGAAAAGCAACACCCAAATGGCAAGGTGGAGC...CTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | TCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGGATGCTCCACCTTGCCATTaGGGTGTTGCTTTTCCTTTG | + |
Preference number: 5 (lower is better) Translates to: SKLYLEIGAYCLALSLLDAPPCH*GVAFPL Trigger: CAAAGGAAAAGCAACACCCAAATGGCAAGGTGGAGC...ATCCAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | TGTCTGTTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGTCCTTCCTGGTTCCATaGGGGAAGGTGATGATGGTT | + |
Preference number: 5 (lower is better) Translates to: CLFWSKLYLEIGAYCLALSFLVP*GKVMMV Trigger: AACCATCATCACCTTCCCCAATGGAACCAGGAAGGA...CAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | TCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGGATATGAGGGTGGTCTTCTaGTCAGCACTGATCTCCTTC | + |
Preference number: 5 (lower is better) Translates to: SKLYLEIGAYCLALSLLDMRVVF*SALISF Trigger: GAAGGAGATCAGTGCTGACAAGAAGACCACCCTCAT...ATCCAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | GTAGATGCAGGCAGGTGTTGGCCAAGCAAAAACACGGAGCCAGCTGTTGTTAACAATTTTTCAGTCCACTaGTTAGGAAACTGCACCACT | + |
Preference number: 5 (lower is better) Translates to: VDAGRCWPSKNTEPAVVNNFSVH*LGNCTT Trigger: AGTGGTGCAGTTTCCTAACAAGTGGACTGAAAAATT...GTTAACAACAGCTGGCTCCGTGTTTTTGCTTGGCCAACACCTGCCTGCATCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000095726.11 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | ACATGGTCTCTTTCTTTACAATTTTTGGATGTCTCTTTACTCCTCATGTGCAGGTGGAGGTGCTGCTTCTaGGCCTGGCTTACCACAACC | + |
Preference number: 5 (lower is better) Translates to: TWSLSLQFLDVSLLLMCRWRCCF*AWLTTT Trigger: GGTTGTGGTAAGCCAGGCCAAGAAGCAGCACCTCCA...CCTGCACATGAGGAGTAAAGAGACATCCAAAAATTGTAAAGAAAGAGACCATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138222.8 |
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CDS TCA 90 bp | GCTTCTGTTTGGAGGACTTCCAGAAAGCTCATCTCTTTCATCCCATaGGGTTGTCCTCTCGGAATCAGTTCCCTCTATCTTTATGTACAC | + |
Preference number: 5 (lower is better) Translates to: ASVWRTSRKLISFIP*GCPLGISSLYLYVH Trigger: GTGTACATAAAGATAGAGGGAACTGATTCCGAGAGGACAACCTCATGGGATGAAAGAGATGAGCTTTCTGGAAGTCCTCCAAACAGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS CCA 90 bp | TGTATAACCTTTTCATCCACAGATGTAAAAGACAGCATTTCATCCTaGGAGTCTGTTCCTCCGGTGGCCATTGTGCTTCTGTTTGGAGGA | + |
Preference number: 5 (lower is better) Translates to: CITFSSTDVKDSISS*ESVPPVAIVLLFGG Trigger: TCCTCCAAACAGAAGCACAATGGCCACCGGAGGAACAGACTCCCAGGATGAAATGCTGTCTTTTACATCTGTGGATGAAAAGGTTATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS-3UTR CAA 90 bp | TCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGGATGTTGGACCCTTTTCCTaGACTCAGATCCTCCAACAT | + |
Preference number: 5 (lower is better) Translates to: SKLYLEIGAYCLALSLLDVGPFS*TQILQH Trigger: ATGTTGGAGGATCTGAGTCAAGGAAAAGGGTCCAAC...ATCCAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | TTGTCTGTTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTATGAGGGTGGTCTTCTaGTCAGCACTGATCTCCTTC | + |
Preference number: 5 (lower is better) Translates to: LSVLVKTIFGDWSLLPGLMRVVF*SALISF Trigger: GAAGGAGATCAGTGCTGACAAGAAGACCACCCTCAT...AAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | TTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGCACCATCTGGGTAGGTaGTGTGCATTGTTTGTGCAT | + |
Preference number: 5 (lower is better) Translates to: FWSKLYLEIGAYCLALSLHHLGR*CALFVH Trigger: ATGCACAAACAATGCACACAACCTACCCAGATGGTG...CAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | TGTCTGTTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGCACCATCTGGGTAGGTaGTGTGCATTGTTTGTGCAT | + |
Preference number: 5 (lower is better) Translates to: CLFWSKLYLEIGAYCLALHHLGR*CALFVH Trigger: ATGCACAAACAATGCACACAACCTACCCAGATGGTG...CAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | TTTGTCTGTTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTGTTGGACCCTTTTCCTaGACTCAGATCCTCCAACAT | + |
Preference number: 5 (lower is better) Translates to: FVCFGQNYIWRLEPTAWPVGPFS*TQILQH Trigger: ATGTTGGAGGATCTGAGTCAAGGAAAAGGGTCCAAC...AGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | CATGGTCTCTTTCTTTACAATTTTTGGATGTCTCTTTACTCCTCATGTGCAGGGGCTCCACCTTGCCATTaGGGTGTTGCTTTTCCTTTG | + |
Preference number: 5 (lower is better) Translates to: HGLFLYNFWMSLYSSCAGAPPCH*GVAFPL Trigger: CAAAGGAAAAGCAACACCCAAATGGCAAGGTGGAGC...CCCTGCACATGAGGAGTAAAGAGACATCCAAAAATTGTAAAGAAAGAGACCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | TTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGGTAGGTTGTGTGCATaGTTTGTGCATCCGCATAAT | + |
Preference number: 5 (lower is better) Translates to: LVKTIFGDWSLLPGLESVGRLCA*FVHPHN Trigger: ATTATGCGGATGCACAAACAATGCACACAACCTACC...AACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | CTGTTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTGGTAGGTTGTGTGCATaGTTTGTGCATCCGCATAAT | + |
Preference number: 5 (lower is better) Translates to: LFWSKLYLEIGAYCLALSGRLCA*FVHPHN Trigger: ATTATGCGGATGCACAAACAATGCACACAACCTACC...ACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | CTGTTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTTCTGCCCAAGCTTCTTaGCAGAAATTTGGAAGACAT | + |
Preference number: 5 (lower is better) Translates to: LFWSKLYLEIGAYCLALSSAQAS*QKFGRH Trigger: ATGTCTTCCAAATTTCTGCAAAGAAGCTTGGGCAGA...ACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | TTTGTCTGTTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTCTTGCCATTTGGGTGTaGCTTTTCCTTTGTCTCATC | + |
Preference number: 5 (lower is better) Translates to: FVCFGQNYIWRLEPTAWPLAIWV*LFLCLI Trigger: GATGAGACAAAGGAAAAGCAACACCCAAATGGCAAG...AGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | TCGCTTTGTCTGTTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGGTAGGTTGTGTGCATaGTTTGTGCATCCGCATAAT | + |
Preference number: 5 (lower is better) Translates to: SLCLFWSKLYLEIGAYCLGRLCA*FVHPHN Trigger: ATTATGCGGATGCACAAACAATGCACACAACCTACC...CAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGACAAAGCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | TGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTGTTGCTTCTTTGCAGAAATTaGGAAGACATGTGTATAACC | + |
Preference number: 5 (lower is better) Translates to: WSKLYLEIGAYCLALSLLLLCRN*EDMCIT Trigger: GGTTATACACATGTCTTCCAAATTTCTGCAAAGAAG...CAACAGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | TTGTCTGTTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTTCTGCCCAAGCTTCTTaGCAGAAATTTGGAAGACAT | + |
Preference number: 5 (lower is better) Translates to: LSVLVKTIFGDWSLLPGLSAQAS*QKFGRH Trigger: ATGTCTTCCAAATTTCTGCAAAGAAGCTTGGGCAGA...AAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAACAGACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | GGTCTCTTTCTTTACAATTTTTGGATGTCTCTTTACTCCTCATGTGCAGGGGATCTTGCCATTTGGGTGTaGCTTTTCCTTTGTCTCATC | + |
Preference number: 5 (lower is better) Translates to: GLFLYNFWMSLYSSCAGDLAIWV*LFLCLI Trigger: GATGAGACAAAGGAAAAGCAACACCCAAATGGCAAG...ATCCCCTGCACATGAGGAGTAAAGAGACATCCAAAAATTGTAAAGAAAGAGACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | AAGATGGTGGTGGCTACATGGTCTCTTTCTTTACAATTTTTGGATGTCTCTTTATCCTTCCTGGTTCCATaGGGGAAGGTGATGATGGTT | + |
Preference number: 5 (lower is better) Translates to: KMVVATWSLSLQFLDVSLSFLVP*GKVMMV Trigger: AACCATCATCACCTTCCCCAATGGAACCAGGAAGGA...TAAAGAGACATCCAAAAATTGTAAAGAAAGAGACCATGTAGCCACCACCATCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | GTTTTGGTCAAAACTATATTTGGAGATTGGAGCCTACTGCCTGGCCTTGAGTCTAATTTTTCAGTCCACTaGTTAGGAAACTGCACCACT | + |
Preference number: 5 (lower is better) Translates to: VLVKTIFGDWSLLPGLESNFSVH*LGNCTT Trigger: AGTGGTGCAGTTTCCTAACAAGTGGACTGAAAAATT...AGACTCAAGGCCAGGCAGTAGGCTCCAATCTCCAAATATAGTTTTGACCAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | CTCTTTCTTTACAATTTTTGGATGTCTCTTTACTCCTCATGTGCAGGGGATCTCAATTTTTCAGTCCACTaGTTAGGAAACTGCACCACT | + |
Preference number: 5 (lower is better) Translates to: LFLYNFWMSLYSSCAGDLNFSVH*LGNCTT Trigger: AGTGGTGCAGTTTCCTAACAAGTGGACTGAAAAATT...GAGATCCCCTGCACATGAGGAGTAAAGAGACATCCAAAAATTGTAAAGAAAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS-3UTR CAA 90 bp | AAGATGGTGGTGGCTACATGGTCTCTTTCTTTACAATTTTTGGATGTCTCTTTAAATTTTTCAGTCCACTaGTTAGGAAACTGCACCACT | + |
Preference number: 5 (lower is better) Translates to: KMVVATWSLSLQFLDVSLNFSVH*LGNCTT Trigger: AGTGGTGCAGTTTCCTAACAAGTGGACTGAAAAATT...TAAAGAGACATCCAAAAATTGTAAAGAAAGAGACCATGTAGCCACCACCATCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000138222.8 |
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CDS CCA 72 bp | CTCTTGCCGGGGTGGGCGAGCCTATACAGGCTTTGGTaGCCTCCGCATCCTGCTTCTTCAAGGTCTTCAGCT | + |
Preference number: 6 (lower is better) Translates to: LLPGWASLYRLW*PPHPASSRSSA Trigger: AGCTGAAGACCTTGAAGAAGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCTCGCCCACCCCGGCAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS CCA 72 bp | TGTACACTGGCAGAGTGTTGCTTGCTCTTGCCGGGGTaGGCGAGCCTATACAGGCTTTGGTGGCCTCCGCAT | + |
Preference number: 6 (lower is better) Translates to: CTLAECCLLLPG*ASLYRLWWPPH Trigger: ATGCGGAGGCCACCAAAGCCTGTATAGGCTCGCCCACCCCGGCAAGAGCAAGCAACACTCTGCCAGTGTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS CAA 72 bp | CTTGCTCTTGCCGGGGTGGGCGAGCCTATACAGGCTTaGGTGGCCTCCGCATCCTGCTTCTTCAAGGTCTTC | + |
Preference number: 6 (lower is better) Translates to: LALAGVGEPIQA*VASASCFFKVF Trigger: GAAGACCTTGAAGAAGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCTCGCCCACCCCGGCAAGAGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS CAA 90 bp | AGAGTGTTGCTTGCTCTTGCCGGGGTGGGCGAGCCTATACAGGCTTaGGTGGCCTCCGCATCCTGCTTCTTCAAGGTCTTCAGCTCCGCA | + |
Preference number: 6 (lower is better) Translates to: RVLLALAGVGEPIQA*VASASCFFKVFSSA Trigger: TGCGGAGCTGAAGACCTTGAAGAAGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCTCGCCCACCCCGGCAAGAGCAAGCAACACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS CCA 72 bp | TTGCTCTTGCCGGGGTGGGCGAGCCTATACAGGCTTTaGTGGCCTCCGCATCCTGCTTCTTCAAGGTCTTCA | + |
Preference number: 6 (lower is better) Translates to: LLLPGWASLYRL*WPPHPASSRSS Trigger: TGAAGACCTTGAAGAAGCAGGATGCGGAGGCCACCAAAGCCTGTATAGGCTCGCCCACCCCGGCAAGAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS CCA 72 bp | CGGATCTCCTGGTTCTCCTTTATCAGAGCATCGATCTaGCTTTGGAGGTGCTGCTTCTTGGCCTGGCTTACC | + |
Preference number: 6 (lower is better) Translates to: RISWFSFIRASI*LWRCCFLAWLT Trigger: GGTAAGCCAGGCCAAGAAGCAGCACCTCCAAAGCCAGATCGATGCTCTGATAAAGGAGAACCAGGAGATCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138222.8 |
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CDS CAA 72 bp | TGCTTCTTGGCCTGGCTTACCACAACCTCATCAAGCTaGCTGTCTTCCTCAGTGATCTGGGCTGTGCTCTCC | + |
Preference number: 6 (lower is better) Translates to: CFLAWLTTTSSS*LSSSVIWAVLS Trigger: GGAGAGCACAGCCCAGATCACTGAGGAAGACAGCAAGCTTGATGAGGTTGTGGTAAGCCAGGCCAAGAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138222.8 |
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CDS CAA 90 bp | CGCACGGATCTCCTGGTTCTCCTTTATCAGAGCATCGATCTGGCTTaGGAGGTGCTGCTTCTTGGCCTGGCTTACCACAACCTCATCAAG | + |
Preference number: 6 (lower is better) Translates to: RTDLLVLLYQSIDLA*EVLLLGLAYHNLIK Trigger: CTTGATGAGGTTGTGGTAAGCCAGGCCAAGAAGCAGCACCTCCAAAGCCAGATCGATGCTCTGATAAAGGAGAACCAGGAGATCCGTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138222.8 |
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CDS GCA 72 bp | TCCCTCTATCTTTATGTACACTGGCAGAGTGTTGCTTaGTCTTGCCGGGGTGGGCGAGCCTATACAGGCTTT | + |
Preference number: 6 (lower is better) Translates to: SLYLYVHWQSVA*SCRGGRAYTGF Trigger: AAAGCCTGTATAGGCTCGCCCACCCCGGCAAGAGCAAGCAACACTCTGCCAGTGTACATAAAGATAGAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS CAA 72 bp | TTCCCTCTATCTTTATGTACACTGGCAGAGTGTTGCTaGCTCTTGCCGGGGTGGGCGAGCCTATACAGGCTT | + |
Preference number: 6 (lower is better) Translates to: FPLSLCTLAECC*LLPGWASLYRL Trigger: AAGCCTGTATAGGCTCGCCCACCCCGGCAAGAGCAAGCAACACTCTGCCAGTGTACATAAAGATAGAGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS CAA 72 bp | ATCAGAGCATCGATCTGGCTTTGGAGGTGCTGCTTCTaGGCCTGGCTTACCACAACCTCATCAAGCTTGCTG | + |
Preference number: 6 (lower is better) Translates to: IRASIWLWRCCF*AWLTTTSSSLL Trigger: CAGCAAGCTTGATGAGGTTGTGGTAAGCCAGGCCAAGAAGCAGCACCTCCAAAGCCAGATCGATGCTCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138222.8 |
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CDS TCA 72 bp | GCATTTGGGGAAAAACAAGGGATGACCCTGCTTGCTTaGGCATGCAGGAGAAGTTCACCGTCCGAAGTCTCT | + |
Preference number: 6 (lower is better) Translates to: AFGEKQGMTLLA*ACRRSSPSEVS Trigger: AGAGACTTCGGACGGTGAACTTCTCCTGCATGCTCAAGCAAGCAGGGTCATCCCTTGTTTTTCCCCAAATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS TCA 72 bp | TCTGCACCCACAGTGCATTTGGGGAAAAACAAGGGATaGCCCTGCTTGCTTGAGCATGCAGGAGAAGTTCAC | + |
Preference number: 6 (lower is better) Translates to: SAPTVHLGKNKG*PCLLEHAGEVH Trigger: GTGAACTTCTCCTGCATGCTCAAGCAAGCAGGGTCATCCCTTGTTTTTCCCCAAATGCACTGTGGGTGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS CAA 72 bp | GCATTTCATCCTGGGAGTCTGTTCCTCCGGTGGCCATaGTGCTTCTGTTTGGAGGACTTCCAGAAAGCTCAT | + |
Preference number: 6 (lower is better) Translates to: AFHPGSLFLRWP*CFCLEDFQKAH Trigger: ATGAGCTTTCTGGAAGTCCTCCAAACAGAAGCACAATGGCCACCGGAGGAACAGACTCCCAGGATGAAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS GCA 72 bp | TTCTCCTTTATCAGAGCATCGATCTGGCTTTGGAGGTaGTGCTTCTTGGCCTGGCTTACCACAACCTCATCA | + |
Preference number: 6 (lower is better) Translates to: FSFIRASIWLWR*CFLAWLTTTSS Trigger: TGATGAGGTTGTGGTAAGCCAGGCCAAGAAGCAGCACCTCCAAAGCCAGATCGATGCTCTGATAAAGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138222.8 |
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CDS CCA 72 bp | ACAACCTCATCAAGCTTGCTGTCTTCCTCAGTGATCTaGGCTGTGCTCTCCATCTTCCTCTTCTCATGGTTG | + |
Preference number: 6 (lower is better) Translates to: TTSSSLLSSSVI*AVLSIFLFSWL Trigger: CAACCATGAGAAGAGGAAGATGGAGAGCACAGCCCAGATCACTGAGGAAGACAGCAAGCTTGATGAGGTTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS CCA 72 bp | AAGACAGCATTTCATCCTGGGAGTCTGTTCCTCCGGTaGCCATTGTGCTTCTGTTTGGAGGACTTCCAGAAA | + |
Preference number: 6 (lower is better) Translates to: KTAFHPGSLFLR*PLCFCLEDFQK Trigger: TTTCTGGAAGTCCTCCAAACAGAAGCACAATGGCCACCGGAGGAACAGACTCCCAGGATGAAATGCTGTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS CAA 72 bp | GTCGCTGAGCATCCGCTCCACCTTGCCATTTGGGTGTaGCTTTTCCTTTGTCTCATCAGTCTTTGTAGTGTC | + |
Preference number: 6 (lower is better) Translates to: VAEHPLHLAIWV*LFLCLISLCSV Trigger: GACACTACAAAGACTGATGAGACAAAGGAAAAGCAACACCCAAATGGCAAGGTGGAGCGGATGCTCAGCGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 |
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CDS TCA 72 bp | TGGAGGACTTCCAGAAAGCTCATCTCTTTCATCCCATaGGGTTGTCCTCTCGGAATCAGTTCCCTCTATCTT | + |
Preference number: 6 (lower is better) Translates to: WRTSRKLISFIP*GCPLGISSLYL Trigger: AAGATAGAGGGAACTGATTCCGAGAGGACAACCTCATGGGATGAAAGAGATGAGCTTTCTGGAAGTCCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS TCA 72 bp | TGTGTCCAGGAATGTGCTGTCAGACAGTGGTTCTGGTaGCATTCTGCCCAAGCTTCTTTGCAGAAATTTGGA | + |
Preference number: 6 (lower is better) Translates to: CVQECAVRQWFW*HSAQASLQKFG Trigger: TCCAAATTTCTGCAAAGAAGCTTGGGCAGAATGTCACCAGAACCACTGTCTGACAGCACATTCCTGGACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS CCA 72 bp | TTTTCATCCACAGATGTAAAAGACAGCATTTCATCCTaGGAGTCTGTTCCTCCGGTGGCCATTGTGCTTCTG | + |
Preference number: 6 (lower is better) Translates to: FSSTDVKDSISS*ESVPPVAIVLL Trigger: CAGAAGCACAATGGCCACCGGAGGAACAGACTCCCAGGATGAAATGCTGTCTTTTACATCTGTGGATGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS GCA 72 bp | ATTTCTTTAGGAGCTCTTGACTTTGTTGGAATATTCTaGACCCACAGTGCATTTGGGGAAAAACAAGGGATG | + |
Preference number: 6 (lower is better) Translates to: ISLGALDFVGIF*THSAFGEKQGM Trigger: CATCCCTTGTTTTTCCCCAAATGCACTGTGGGTGCAGAATATTCCAACAAAGTCAAGAGCTCCTAAAGAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS GCA 72 bp | TCCTTTGTCTCATCAGTCTTTGTAGTGTCCGAGGTTTaGTGTATTTCTTTAGGAGCTCTTGACTTTGTTGGA | + |
Preference number: 6 (lower is better) Translates to: SFVSSVFVVSEV*CISLGALDFVG Trigger: TCCAACAAAGTCAAGAGCTCCTAAAGAAATACAGCAAACCTCGGACACTACAAAGACTGATGAGACAAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 |
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CDS CAA 90 bp | GACAGTGGTTCTGGTGACATTCTGCCCAAGCTTCTTTGCAGAAATTaGGAAGACATGTGTATAACCTTTTCATCCACAGATGTAAAAGAC | + |
Preference number: 6 (lower is better) Translates to: DSGSGDILPKLLCRN*EDMCITFSSTDVKD Trigger: GTCTTTTACATCTGTGGATGAAAAGGTTATACACATGTCTTCCAAATTTCTGCAAAGAAGCTTGGGCAGAATGTCACCAGAACCACTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |
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CDS CAA 72 bp | TCTGGTGACATTCTGCCCAAGCTTCTTTGCAGAAATTaGGAAGACATGTGTATAACCTTTTCATCCACAGAT | + |
Preference number: 6 (lower is better) Translates to: SGDILPKLLCRN*EDMCITFSSTD Trigger: ATCTGTGGATGAAAAGGTTATACACATGTCTTCCAAATTTCTGCAAAGAAGCTTGGGCAGAATGTCACCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000095726.11 ENSMUST00000128533.8 ENSMUST00000129709.8 ENSMUST00000138222.8 ENSMUST00000140192.8 ENSMUST00000144861.2 |