Pregenerated sensors for TCL1B4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079007Ensembl transcript IDs: ENSMUST00000000718.7, ENSMUST00000222867.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAACTAGAAACTTGAGGAACAAGCAGAGAGGTGGGTGCAAAGTCTaGCCCAAGGGCACAGGGGCAGGAGCCAGCCAGGCTATCAAGACC | + |
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Preference number: 1 (lower is better) Translates to: RTRNLRNKQRGGCKV*PKGTGAGASQAIKT Trigger: GGTCTTGATAGCCTGGCTGGCTCCTGCCCCTGTGCCCTTGGGGCAGACTTTGCACCCACCTCTCTGCTTGTTCCTCAAGTTTCTAGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000718.7 |
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| 3UTR-3UTR TCA 90 bp | GGGGTTGGGAGGGGTCTAGGGTCAGCATCACTTCCTGGAGCCAAGGAACTGAGCCGAACTTCTTGCCAGTaGTGGCTCAGAGGCCCACAC | + |
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Preference number: 2 (lower is better) Translates to: GVGRGLGSASLPGAKELSRTSCQ*WLRGPH Trigger: GTGTGGGCCTCTGAGCCATCACTGGCAAGAAGTTCG...GCTCAGTTCCTTGGCTCCAGGAAGTGATGCTGACCCTAGACCCCTCCCAACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCACTGTGCCTTCAAGCTACTGAGCACTGAGTGTCCTCTACCCAGCACCAGGGGTGGGTGCAAAGTCTaGCCCAAGGGCACAGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: SHCAFKLLSTECPLPSTRGGCKV*PKGTGA Trigger: TGCCCCTGTGCCCTTGGGGCAGACTTTGCACCCACC...CCTGGTGCTGGGTAGAGGACACTCAGTGCTCAGTAGCTTGAAGGCACAGTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| 3UTR-3UTR GCA 90 bp | GAACTGAGCACCTGGACAAGTCCTCCAGATGTTCTCTGTAAGTCTCCCACTGTGGGTGGGTGCAAAGTCTaGCCCAAGGGCACAGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: ELSTWTSPPDVLCKSPTVGGCKV*PKGTGA Trigger: TGCCCCTGTGCCCTTGGGGCAGACTTTGCACCCACC...CACAGTGGGAGACTTACAGAGAACATCTGGAGGACTTGTCCAGGTGCTCAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTTCAAGCTACTGAGCACTGAGTGTCCTCTACCCAGCACCAGGCGAACTTCTAAGCAGAGAGGTGGGTaGAAAGTCTGCCCCAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: AFKLLSTECPLPSTRRTSKQRGG*KVCPKG Trigger: GCCCTTGGGGCAGACTTTGCACCCACCTCTCTGCTT...AGAAGTTCGCCTGGTGCTGGGTAGAGGACACTCAGTGCTCAGTAGCTTGAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTGGGGTTGGGAGGGGTCTAGGGTCAGCATCACTTCCTGGAGCCAAGGAACTGAACAAGCAGAGAGGTaGGTGCAAAGTCTGCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: SWGWEGSRVSITSWSQGTEQAER*VQSLPQ Trigger: TTGGGGCAGACTTTGCACCCACCTCTCTGCTTGTTC...AGTTCCTTGGCTCCAGGAAGTGATGCTGACCCTAGACCCCTCCCAACCCCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| 3UTR-3UTR TCA 90 bp | GAACTGAGCACCTGGACAAGTCCTCCAGATGTTCTCTGTAAGTCTCCCACTGTGCGAACTTCTTGCCAGTaGTGGCTCAGAGGCCCACAC | + |
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Preference number: 2 (lower is better) Translates to: ELSTWTSPPDVLCKSPTVRTSCQ*WLRGPH Trigger: GTGTGGGCCTCTGAGCCATCACTGGCAAGAAGTTCG...CACAGTGGGAGACTTACAGAGAACATCTGGAGGACTTGTCCAGGTGCTCAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| 3UTR-3UTR GCA 90 bp | GGACAAGTCCTCCAGATGTTCTCTGTAAGTCTCCCACTGTGCCTTCAAGCTACTAAGCAGAGAGGTGGGTaGAAAGTCTGCCCCAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: GQVLQMFSVSLPLCLQATKQRGG*KVCPKG Trigger: GCCCTTGGGGCAGACTTTGCACCCACCTCTCTGCTT...AGTAGCTTGAAGGCACAGTGGGAGACTTACAGAGAACATCTGGAGGACTTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGTTGGGGTTGGGAGGGGTCTAGGGTCAGCATCACTTCCTGGAGCCAAGGAGTCAAAGGCACAAAGTaGGCAAGAGAAGATGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: TSWGWEGSRVSITSWSQGVKGTK*AREDAV Trigger: AACTGCATCTTCTCTTGCTCACTTTGTGCCTTTGAC...TCCTTGGCTCCAGGAAGTGATGCTGACCCTAGACCCCTCCCAACCCCAACTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGACAAGTCCTCCAGATGTTCTCTGTAAGTCTCCCACTGTGCCTTCAAGCTGAACAAGCAGAGAGGTaGGTGCAAAGTCTGCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: PGQVLQMFSVSLPLCLQAEQAER*VQSLPQ Trigger: TTGGGGCAGACTTTGCACCCACCTCTCTGCTTGTTC...AGCTTGAAGGCACAGTGGGAGACTTACAGAGAACATCTGGAGGACTTGTCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| 3UTR-3UTR GCA 90 bp | GTAAATGGGGACAAATCTCCTGCCACACAAGGCACTAGAAGCCCAGGTGTAGGAAGAGAAGATGCAGTTTaGCTCCAGCTAGGGAGAACC | + |
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Preference number: 2 (lower is better) Translates to: VNGDKSPATQGTRSPGVGREDAV*LQLGRT Trigger: GGTTCTCCCTAGCTGGAGGCAAACTGCATCTTCTCT...TCCTACACCTGGGCTTCTAGTGCCTTGTGTGGCAGGAGATTTGTCCCCATTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| 3UTR-3UTR TCA 90 bp | GGACAAGTCCTCCAGATGTTCTCTGTAAGTCTCCCACTGTGCCTTCAAGCTACTGTAGAACTAGAAACTTaGGGAACAAGCAGAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: GQVLQMFSVSLPLCLQATVELET*GTSREV Trigger: CACCTCTCTGCTTGTTCCTCAAGTTTCTAGTTCTAC...AGTAGCTTGAAGGCACAGTGGGAGACTTACAGAGAACATCTGGAGGACTTGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCAGTGTCAAAGGCACAAAGTGAGCAAGAGAAGATGCAGTTTGCCTCCAGCTGTAGAACTAGAAACTTaGGGAACAAGCAGAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: GQCQRHKVSKRRCSLPPAVELET*GTSREV Trigger: CACCTCTCTGCTTGTTCCTCAAGTTTCTAGTTCTAC...AGCTGGAGGCAAACTGCATCTTCTCTTGCTCACTTTGTGCCTTTGACACTGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| 3UTR CCA 72 bp | TGGGGTTGGGAGGGGTCTAGGGTCAGCATCACTTCCTaGAGCCAAGGAACTGAGCACCTGGACAAGTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: WGWEGSRVSITS*SQGTEHLDKSS Trigger: GGAGGACTTGTCCAGGTGCTCAGTTCCTTGGCTCCAGGAAGTGATGCTGACCCTAGACCCCTCCCAACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGTTGGGAGGGGTCTAGGGTCAGCATCACTTCCTGGAGCCAAGGAACTGAGCTGTAGAACTAGAAACTaGAGGAACAAGCAGAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: GVGRGLGSASLPGAKELSCRTRN*RNKQRG Trigger: ACCTCTCTGCTTGTTCCTCAAGTTTCTAGTTCTACA...GCTCAGTTCCTTGGCTCCAGGAAGTGATGCTGACCCTAGACCCCTCCCAACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| 3UTR GCA 72 bp | GGTCAGTGTCAAAGGCACAAAGTGAGCAAGAGAAGATaGAGTTTGCCTCCAGCTAGGGAGAACCGTCAAGCC | + |
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Preference number: 3 (lower is better) Translates to: GQCQRHKVSKRR*SLPPARENRQA Trigger: GGCTTGACGGTTCTCCCTAGCTGGAGGCAAACTGCATCTTCTCTTGCTCACTTTGTGCCTTTGACACTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| 3UTR CCA 72 bp | TCAGCATCACTTCCTGGAGCCAAGGAACTGAGCACCTaGACAAGTCCTCCAGATGTTCTCTGTAAGTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: SASLPGAKELST*TSPPDVLCKSP Trigger: GGGAGACTTACAGAGAACATCTGGAGGACTTGTCCAGGTGCTCAGTTCCTTGGCTCCAGGAAGTGATGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| 3UTR-3UTR CAA 90 bp | GTAAATGGGGACAAATCTCCTGCCACACAAGGCACTAGAAGCCCAGGTGTAGGATGTAGAACTAGAAACTaGAGGAACAAGCAGAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: VNGDKSPATQGTRSPGVGCRTRN*RNKQRG Trigger: ACCTCTCTGCTTGTTCCTCAAGTTTCTAGTTCTACA...TCCTACACCTGGGCTTCTAGTGCCTTGTGTGGCAGGAGATTTGTCCCCATTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS-3UTR CCA 90 bp | AGTTGGGGTTGGGAGGGGTCTAGGGTCAGCATCACTTCCTGGAGCCAAGGAACTTCGGGACTAGGCTCCTaGAAGAGTGTGGTCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: SWGWEGSRVSITSWSQGTSGLGS*KSVVIC Trigger: GCAGATGACCACACTCTTCCAGGAGCCTAGTCCCGA...AGTTCCTTGGCTCCAGGAAGTGATGCTGACCCTAGACCCCTCCCAACCCCAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS-3UTR CCA 90 bp | AGTTGGGGTTGGGAGGGGTCTAGGGTCAGCATCACTTCCTGGAGCCAAGGAACTGACCAGGAAGCAAGGTaGGAATGGCATACAGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: SWGWEGSRVSITSWSQGTDQEAR*EWHTGK Trigger: TTTCCCTGTATGCCATTCCCACCTTGCTTCCTGGTC...AGTTCCTTGGCTCCAGGAAGTGATGCTGACCCTAGACCCCTCCCAACCCCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS-3UTR CCA 90 bp | GCCTTCAAGCTACTGAGCACTGAGTGTCCTCTACCCAGCACCAGGCGAACTTCTGAAGCAAGGTGGGAATaGCATACAGGGAAAACGAAC | + |
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Preference number: 4 (lower is better) Translates to: AFKLLSTECPLPSTRRTSEARWE*HTGKTN Trigger: GTTCGTTTTCCCTGTATGCCATTCCCACCTTGCTTC...AGAAGTTCGCCTGGTGCTGGGTAGAGGACACTCAGTGCTCAGTAGCTTGAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS-3UTR CCA 90 bp | CCTGGACAAGTCCTCCAGATGTTCTCTGTAAGTCTCCCACTGTGCCTTCAAGCTGACCAGGAAGCAAGGTaGGAATGGCATACAGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: PGQVLQMFSVSLPLCLQADQEAR*EWHTGK Trigger: TTTCCCTGTATGCCATTCCCACCTTGCTTCCTGGTC...AGCTTGAAGGCACAGTGGGAGACTTACAGAGAACATCTGGAGGACTTGTCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS-3UTR TCA 90 bp | TGTGCCTTCAAGCTACTGAGCACTGAGTGTCCTCTACCCAGCACCAGGCGAACTCTTGCTGCAATATGGTaGATGAGAAGAAGTTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: CAFKLLSTECPLPSTRRTLAAIW*MRRSFH Trigger: GTGGAAACTTCTTCTCATTCACCATATTGCAGCAAG...AGTTCGCCTGGTGCTGGGTAGAGGACACTCAGTGCTCAGTAGCTTGAAGGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS-3UTR TCA 90 bp | GCCTTCAAGCTACTGAGCACTGAGTGTCCTCTACCCAGCACCAGGCGAACTTCTCTTGCTGCAATATGGTaGATGAGAAGAAGTTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: AFKLLSTECPLPSTRRTSLAAIW*MRRSFH Trigger: GTGGAAACTTCTTCTCATTCACCATATTGCAGCAAG...AGAAGTTCGCCTGGTGCTGGGTAGAGGACACTCAGTGCTCAGTAGCTTGAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS-3UTR GCA 90 bp | AGTTGGGGTTGGGAGGGGTCTAGGGTCAGCATCACTTCCTGGAGCCAAGGAACTCACAGGTTTCAATCTTaGTGCAATATGGTGAATGAG | + |
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Preference number: 4 (lower is better) Translates to: SWGWEGSRVSITSWSQGTHRFQS*CNMVNE Trigger: CTCATTCACCATATTGCAGCAAGATTGAAACCTGTG...AGTTCCTTGGCTCCAGGAAGTGATGCTGACCCTAGACCCCTCCCAACCCCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| 3UTR CAA 72 bp | TGTCAAAGGCACAAAGTGAGCAAGAGAAGATGCAGTTaGCCTCCAGCTAGGGAGAACCGTCAAGCCACAGAT | + |
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Preference number: 4 (lower is better) Translates to: CQRHKVSKRRCS*PPARENRQATD Trigger: ATCTGTGGCTTGACGGTTCTCCCTAGCTGGAGGCAAACTGCATCTTCTCTTGCTCACTTTGTGCCTTTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS-3UTR TCA 90 bp | TCCCACTGTGCCTTCAAGCTACTGAGCACTGAGTGTCCTCTACCCAGCACCAGGCTGCAATATGGTGAATaGGAAGAAGTTTCCACTTTT | + |
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Preference number: 4 (lower is better) Translates to: SHCAFKLLSTECPLPSTRLQYGE*EEVSTF Trigger: AAAAGTGGAAACTTCTTCTCATTCACCATATTGCAG...CCTGGTGCTGGGTAGAGGACACTCAGTGCTCAGTAGCTTGAAGGCACAGTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS-3UTR CCA 90 bp | GGTCAGTGTCAAAGGCACAAAGTGAGCAAGAGAAGATGCAGTTTGCCTCCAGCTGAAGCAAGGTGGGAATaGCATACAGGGAAAACGAAC | + |
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Preference number: 4 (lower is better) Translates to: GQCQRHKVSKRRCSLPPAEARWE*HTGKTN Trigger: GTTCGTTTTCCCTGTATGCCATTCCCACCTTGCTTC...AGCTGGAGGCAAACTGCATCTTCTCTTGCTCACTTTGTGCCTTTGACACTGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| 3UTR CAA 72 bp | AAAGACCATGGCAGGAGGTGTTGTAGAACTAGAAACTaGAGGAACAAGCAGAGAGGTGGGTGCAAAGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: KDHGRRCCRTRN*RNKQRGGCKVC Trigger: GCAGACTTTGCACCCACCTCTCTGCTTGTTCCTCAAGTTTCTAGTTCTACAACACCTCCTGCCATGGTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS-3UTR GCA 90 bp | CAAGTCCTCCAGATGTTCTCTGTAAGTCTCCCACTGTGCCTTCAAGCTACTGAGAAGAGTGTGGTCATCTaGCACAAGTGGACAGTTACA | + |
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Preference number: 4 (lower is better) Translates to: QVLQMFSVSLPLCLQATEKSVVI*HKWTVT Trigger: TGTAACTGTCCACTTGTGGCAGATGACCACACTCTT...CTCAGTAGCTTGAAGGCACAGTGGGAGACTTACAGAGAACATCTGGAGGACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS-3UTR GCA 90 bp | CCTGGACAAGTCCTCCAGATGTTCTCTGTAAGTCTCCCACTGTGCCTTCAAGCTCACAGGTTTCAATCTTaGTGCAATATGGTGAATGAG | + |
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Preference number: 4 (lower is better) Translates to: PGQVLQMFSVSLPLCLQAHRFQS*CNMVNE Trigger: CTCATTCACCATATTGCAGCAAGATTGAAACCTGTG...AGCTTGAAGGCACAGTGGGAGACTTACAGAGAACATCTGGAGGACTTGTCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS-3UTR TCA 90 bp | GAACTGAGCACCTGGACAAGTCCTCCAGATGTTCTCTGTAAGTCTCCCACTGTGCTGCAATATGGTGAATaGGAAGAAGTTTCCACTTTT | + |
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Preference number: 4 (lower is better) Translates to: ELSTWTSPPDVLCKSPTVLQYGE*EEVSTF Trigger: AAAAGTGGAAACTTCTTCTCATTCACCATATTGCAG...CACAGTGGGAGACTTACAGAGAACATCTGGAGGACTTGTCCAGGTGCTCAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS-3UTR GCA 90 bp | CAAGTCCTCCAGATGTTCTCTGTAAGTCTCCCACTGTGCCTTCAAGCTACTGAGAGGTTTCAATCTTGCTaGAATATGGTGAATGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: QVLQMFSVSLPLCLQATERFQSC*NMVNEK Trigger: CTTCTCATTCACCATATTGCAGCAAGATTGAAACCT...CTCAGTAGCTTGAAGGCACAGTGGGAGACTTACAGAGAACATCTGGAGGACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS-3UTR GCA 90 bp | AAGGAACTGAGCACCTGGACAAGTCCTCCAGATGTTCTCTGTAAGTCTCCCACTAGGTTTCAATCTTGCTaGAATATGGTGAATGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: KELSTWTSPPDVLCKSPTRFQSC*NMVNEK Trigger: CTTCTCATTCACCATATTGCAGCAAGATTGAAACCT...AGTGGGAGACTTACAGAGAACATCTGGAGGACTTGTCCAGGTGCTCAGTTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS-3UTR CAA 90 bp | ACAAGTTGGGGTTGGGAGGGGTCTAGGGTCAGCATCACTTCCTGGAGCCAAGGAAAGAAGTTTCCACTTTaGCAGCTACCCACTGTCTAC | + |
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Preference number: 5 (lower is better) Translates to: TSWGWEGSRVSITSWSQGKKFPL*QLPTVY Trigger: GTAGACAGTGGGTAGCTGCAAAAGTGGAAACTTCTT...TCCTTGGCTCCAGGAAGTGATGCTGACCCTAGACCCCTCCCAACCCCAACTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS CCA 90 bp | CTGGGTAGAAAGTTGAAAGTCTTGAGAGAGTCGGGACTAGGCTCCTaGAAGAGTGTGGTCATCTGCCACAAGTGGACAGTTACACAGGTT | + |
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Preference number: 5 (lower is better) Translates to: LGRKLKVLRESGLGS*KSVVICHKWTVTQV Trigger: AACCTGTGTAACTGTCCACTTGTGGCAGATGACCACACTCTTCCAGGAGCCTAGTCCCGACTCTCTCAAGACTTTCAACTTTCTACCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS-3UTR CAA 90 bp | CCTGGACAAGTCCTCCAGATGTTCTCTGTAAGTCTCCCACTGTGCCTTCAAGCTAGAAAGTTGAAAGTCTaGAGAGAGTCGGGACTAGGC | + |
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Preference number: 5 (lower is better) Translates to: PGQVLQMFSVSLPLCLQARKLKV*RESGLG Trigger: GCCTAGTCCCGACTCTCTCAAGACTTTCAACTTTCT...AGCTTGAAGGCACAGTGGGAGACTTACAGAGAACATCTGGAGGACTTGTCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS GCA 90 bp | GTCTTGAGAGAGTCGGGACTAGGCTCCTGGAAGAGTGTGGTCATCTaGCACAAGTGGACAGTTACACAGGTTTCAATCTTGCTGCAATAT | + |
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Preference number: 5 (lower is better) Translates to: VLRESGLGSWKSVVI*HKWTVTQVSILLQY Trigger: ATATTGCAGCAAGATTGAAACCTGTGTAACTGTCCACTTGTGGCAGATGACCACACTCTTCCAGGAGCCTAGTCCCGACTCTCTCAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS CCA 90 bp | CCTCTGTGCCATAAAACTGGGAATGATTCACTAATCTCCAGTGCATaGCATCTGCTCCCCGGTATGTGTTCCTGGACTCTAATCTCCATG | + |
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Preference number: 5 (lower is better) Translates to: PLCHKTGNDSLISSA*HLLPGMCSWTLISM Trigger: CATGGAGATTAGAGTCCAGGAACACATACCGGGGAGCAGATGCCATGCACTGGAGATTAGTGAATCATTCCCAGTTTTATGGCACAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS-3UTR CAA 90 bp | AAGGAACTGAGCACCTGGACAAGTCCTCCAGATGTTCTCTGTAAGTCTCCCACTAGAAAGTTGAAAGTCTaGAGAGAGTCGGGACTAGGC | + |
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Preference number: 5 (lower is better) Translates to: KELSTWTSPPDVLCKSPTRKLKV*RESGLG Trigger: GCCTAGTCCCGACTCTCTCAAGACTTTCAACTTTCT...AGTGGGAGACTTACAGAGAACATCTGGAGGACTTGTCCAGGTGCTCAGTTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS GCA 90 bp | CTACCCACTGTCTACCATGTTCATCCTCATAGATGTCATCTCTTGTaGAGACCAGGAAGCAAGGTGGGAATGGCATACAGGGAAAACGAA | + |
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Preference number: 5 (lower is better) Translates to: LPTVYHVHPHRCHLL*RPGSKVGMAYRENE Trigger: TTCGTTTTCCCTGTATGCCATTCCCACCTTGCTTCCTGGTCTGCACAAGAGATGACATCTATGAGGATGAACATGGTAGACAGTGGGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS-3UTR CAA 90 bp | CAAGTCCTCCAGATGTTCTCTGTAAGTCTCCCACTGTGCCTTCAAGCTACTGAGAAGAAGTTTCCACTTTaGCAGCTACCCACTGTCTAC | + |
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Preference number: 5 (lower is better) Translates to: QVLQMFSVSLPLCLQATEKKFPL*QLPTVY Trigger: GTAGACAGTGGGTAGCTGCAAAAGTGGAAACTTCTT...CTCAGTAGCTTGAAGGCACAGTGGGAGACTTACAGAGAACATCTGGAGGACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS TCA 90 bp | CCACAAGTGGACAGTTACACAGGTTTCAATCTTGCTGCAATATGGTaGATGAGAAGAAGTTTCCACTTTTGCAGCTACCCACTGTCTACC | + |
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Preference number: 5 (lower is better) Translates to: PQVDSYTGFNLAAIW*MRRSFHFCSYPLST Trigger: GGTAGACAGTGGGTAGCTGCAAAAGTGGAAACTTCTTCTCATTCACCATATTGCAGCAAGATTGAAACCTGTGTAACTGTCCACTTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS GCA 90 bp | GTGTGGTCATCTGCCACAAGTGGACAGTTACACAGGTTTCAATCTTaGTGCAATATGGTGAATGAGAAGAAGTTTCCACTTTTGCAGCTA | + |
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Preference number: 5 (lower is better) Translates to: VWSSATSGQLHRFQS*CNMVNEKKFPLLQL Trigger: TAGCTGCAAAAGTGGAAACTTCTTCTCATTCACCATATTGCAGCAAGATTGAAACCTGTGTAACTGTCCACTTGTGGCAGATGACCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS TCA 90 bp | AAGTGGACAGTTACACAGGTTTCAATCTTGCTGCAATATGGTGAATaGGAAGAAGTTTCCACTTTTGCAGCTACCCACTGTCTACCATGT | + |
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Preference number: 5 (lower is better) Translates to: KWTVTQVSILLQYGE*EEVSTFAATHCLPC Trigger: ACATGGTAGACAGTGGGTAGCTGCAAAAGTGGAAACTTCTTCTCATTCACCATATTGCAGCAAGATTGAAACCTGTGTAACTGTCCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS GCA 72 bp | GAGTCGGGACTAGGCTCCTGGAAGAGTGTGGTCATCTaGCACAAGTGGACAGTTACACAGGTTTCAATCTTG | + |
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Preference number: 6 (lower is better) Translates to: ESGLGSWKSVVI*HKWTVTQVSIL Trigger: CAAGATTGAAACCTGTGTAACTGTCCACTTGTGGCAGATGACCACACTCTTCCAGGAGCCTAGTCCCGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS CAA 90 bp | TTCCTGGACTCTAATCTCCATGTCCTGGGTAGAAAGTTGAAAGTCTaGAGAGAGTCGGGACTAGGCTCCTGGAAGAGTGTGGTCATCTGC | + |
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Preference number: 6 (lower is better) Translates to: FLDSNLHVLGRKLKV*RESGLGSWKSVVIC Trigger: GCAGATGACCACACTCTTCCAGGAGCCTAGTCCCGACTCTCTCAAGACTTTCAACTTTCTACCCAGGACATGGAGATTAGAGTCCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS CAA 90 bp | CGGTATGTGTTCCTGGACTCTAATCTCCATGTCCTGGGTAGAAAGTaGAAAGTCTTGAGAGAGTCGGGACTAGGCTCCTGGAAGAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: RYVFLDSNLHVLGRK*KVLRESGLGSWKSV Trigger: CACACTCTTCCAGGAGCCTAGTCCCGACTCTCTCAAGACTTTCAACTTTCTACCCAGGACATGGAGATTAGAGTCCAGGAACACATACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS CAA 72 bp | TTCCTGGACTCTAATCTCCATGTCCTGGGTAGAAAGTaGAAAGTCTTGAGAGAGTCGGGACTAGGCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: FLDSNLHVLGRK*KVLRESGLGSW Trigger: CCAGGAGCCTAGTCCCGACTCTCTCAAGACTTTCAACTTTCTACCCAGGACATGGAGATTAGAGTCCAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS CAA 90 bp | CAGCTACCCACTGTCTACCATGTTCATCCTCATAGATGTCATCTCTaGTGCAGACCAGGAAGCAAGGTGGGAATGGCATACAGGGAAAAC | + |
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Preference number: 6 (lower is better) Translates to: QLPTVYHVHPHRCHL*CRPGSKVGMAYREN Trigger: GTTTTCCCTGTATGCCATTCCCACCTTGCTTCCTGGTCTGCACAAGAGATGACATCTATGAGGATGAACATGGTAGACAGTGGGTAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS CAA 72 bp | TCTAATCTCCATGTCCTGGGTAGAAAGTTGAAAGTCTaGAGAGAGTCGGGACTAGGCTCCTGGAAGAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SNLHVLGRKLKV*RESGLGSWKSV Trigger: CACACTCTTCCAGGAGCCTAGTCCCGACTCTCTCAAGACTTTCAACTTTCTACCCAGGACATGGAGATTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS CCA 72 bp | CATAAAACTGGGAATGATTCACTAATCTCCAGTGCATaGCATCTGCTCCCCGGTATGTGTTCCTGGACTCTA | + |
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Preference number: 6 (lower is better) Translates to: HKTGNDSLISSA*HLLPGMCSWTL Trigger: TAGAGTCCAGGAACACATACCGGGGAGCAGATGCCATGCACTGGAGATTAGTGAATCATTCCCAGTTTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS GCA 72 bp | AAGACCTTGAATCCAGCATCAGGACCAGTTCCTCTGTaGCATAAAACTGGGAATGATTCACTAATCTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: KTLNPASGPVPL*HKTGNDSLISS Trigger: ACTGGAGATTAGTGAATCATTCCCAGTTTTATGGCACAGAGGAACTGGTCCTGATGCTGGATTCAAGGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222867.2 |
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| CDS TCA 72 bp | GTTACACAGGTTTCAATCTTGCTGCAATATGGTGAATaGGAAGAAGTTTCCACTTTTGCAGCTACCCACTGT | + |
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Preference number: 6 (lower is better) Translates to: VTQVSILLQYGE*EEVSTFAATHC Trigger: ACAGTGGGTAGCTGCAAAAGTGGAAACTTCTTCTCATTCACCATATTGCAGCAAGATTGAAACCTGTGTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS TCA 72 bp | GACAGTTACACAGGTTTCAATCTTGCTGCAATATGGTaGATGAGAAGAAGTTTCCACTTTTGCAGCTACCCA | + |
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Preference number: 6 (lower is better) Translates to: DSYTGFNLAAIW*MRRSFHFCSYP Trigger: TGGGTAGCTGCAAAAGTGGAAACTTCTTCTCATTCACCATATTGCAGCAAGATTGAAACCTGTGTAACTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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| CDS GCA 72 bp | TCTGCCACAAGTGGACAGTTACACAGGTTTCAATCTTaGTGCAATATGGTGAATGAGAAGAAGTTTCCACTT | + |
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Preference number: 6 (lower is better) Translates to: SATSGQLHRFQS*CNMVNEKKFPL Trigger: AAGTGGAAACTTCTTCTCATTCACCATATTGCAGCAAGATTGAAACCTGTGTAACTGTCCACTTGTGGCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000718.7 ENSMUST00000222867.2 |
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