Pregenerated sensors for TCL1B2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060863Ensembl transcript IDs: ENSMUST00000081379.7, ENSMUST00000142230.8, ENSMUST00000146174.8
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCCTAGGGTCAGATTCACTTCCTGGAGCCAAGGAACTGAGCACCTaGACAAGTACTCCAGATGTTCTCTGTAAGTCTCCCACTGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: GLGSDSLPGAKELST*TSTPDVLCKSPTVP Trigger: AGGCACAGTGGGAGACTTACAGAGAACATCTGGAGTACTTGTCCAGGTGCTCAGTTCCTTGGCTCCAGGAAGTGAATCTGACCCTAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081379.7 ENSMUST00000146174.8 |
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| 3UTR-3UTR TCA 90 bp | ACCCAGCACCAGGCAAACTTCTTGCCAGTGATAGGTCAGAGGCCCACAGGGCATTCGTGGTCCCTGACCTaGCAAACCTTCCCAGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: TQHQANFLPVIGQRPTGHSWSLT*QTFPGA Trigger: AGCTCCTGGGAAGGTTTGTCAGGTCAGGGACCACGA...ATGCCCTGTGGGCCTCTGACCTATCACTGGCAAGAAGTTTGCCTGGTGCTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146174.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGGCCTAGGGTCAGATTCACTTCCTGGAGCCAAGGAACTGAGCACCTGGGCCAGAGGCACAAAGTaGGCAAGAGAAGATGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: GRGLGSDSLPGAKELSTWARGTK*AREDAV Trigger: AACTGCATCTTCTCTTGCCCACTTTGTGCCTCTGGC...CCAGGTGCTCAGTTCCTTGGCTCCAGGAAGTGAATCTGACCCTAGGCCCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081379.7 ENSMUST00000146174.8 |
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| 3UTR-3UTR TCA 90 bp | CCTAAGGTAAATGGGGACAAATCTCCTGCCACACAAGGCACTAGAAGCCCAGGTGTAGAACTAGAAACTTaGGGAACAAACAGAGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: PKVNGDKSPATQGTRSPGVELET*GTNRGV Trigger: CACCCCTCTGTTTGTTCCTCAAGTTTCTAGTTCTAC...ACCTGGGCTTCTAGTGCCTTGTGTGGCAGGAGATTTGTCCCCATTTACCTTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081379.7 ENSMUST00000142230.8 ENSMUST00000146174.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGGACAAGTACTCCAGATGTTCTCTGTAAGTCTCCCACTGTGCCTTCAAGCTGTAGAACTAGAAACTTaGGGAACAAACAGAGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: PGQVLQMFSVSLPLCLQAVELET*GTNRGV Trigger: CACCCCTCTGTTTGTTCCTCAAGTTTCTAGTTCTAC...AGCTTGAAGGCACAGTGGGAGACTTACAGAGAACATCTGGAGTACTTGTCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081379.7 ENSMUST00000146174.8 |
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| 3UTR TCA 72 bp | AGCCAGGCTATCAAGACCTGTGAGGGTCGTGGTCCCTaGCCTGACAAACCTTCCCAGGAGCTCCCATCAGTC | + |
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Preference number: 3 (lower is better) Translates to: SQAIKTCEGRGP*PDKPSQELPSV Trigger: GACTGATGGGAGCTCCTGGGAAGGTTTGTCAGGTCAGGGACCACGACCCTCACAGGTCTTGATAGCCTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146174.8 |
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| 3UTR CCA 72 bp | TTGGGGTGGGAGGGGCCTAGGGTCAGATTCACTTCCTaGAGCCAAGGAACTGAGCACCTGGACAAGTACTCC | + |
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Preference number: 3 (lower is better) Translates to: LGWEGPRVRFTS*SQGTEHLDKYS Trigger: GGAGTACTTGTCCAGGTGCTCAGTTCCTTGGCTCCAGGAAGTGAATCTGACCCTAGGCCCCTCCCACCCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000081379.7 ENSMUST00000146174.8 |
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| 3UTR CCA 72 bp | TCAGATTCACTTCCTGGAGCCAAGGAACTGAGCACCTaGACAAGTACTCCAGATGTTCTCTGTAAGTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: SDSLPGAKELST*TSTPDVLCKSP Trigger: GGGAGACTTACAGAGAACATCTGGAGTACTTGTCCAGGTGCTCAGTTCCTTGGCTCCAGGAAGTGAATCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081379.7 ENSMUST00000146174.8 |
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| 3UTR CAA 72 bp | GGCCAGAGGCACAAAGTGGGCAAGAGAAGATGCAGTTaGTCTCCAGCTAGGGAGAACGGTCAGGACAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: GQRHKVGKRRCS*SPARENGQDRD Trigger: ATCTCTGTCCTGACCGTTCTCCCTAGCTGGAGACAAACTGCATCTTCTCTTGCCCACTTTGTGCCTCTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000081379.7 ENSMUST00000142230.8 ENSMUST00000146174.8 |
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| CDS-3UTR CCA 90 bp | AATGGGGACAAATCTCCTGCCACACAAGGCACTAGAAGCCCAGGTGGAGGAGTTGCTCCTGGGGGTATCTaGTCATCTGCCACAAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: NGDKSPATQGTRSPGGGVAPGGI*SSATSE Trigger: TTCACTTGTGGCAGATGACCAGATACCCCCAGGAGC...AACTCCTCCACCTGGGCTTCTAGTGCCTTGTGTGGCAGGAGATTTGTCCCCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081379.7 ENSMUST00000142230.8 ENSMUST00000146174.8 |
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| CDS-3UTR CCA 90 bp | AATCTCCTGCCACACAAGGCACTAGAAGCCCAGGTGGAGGAGTTTGAATGGAGGGCTCCTGGGGGTATCTaGTCATCTGCCACAAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: NLLPHKALEAQVEEFEWRAPGGI*SSATSE Trigger: TTCACTTGTGGCAGATGACCAGATACCCCCAGGAGC...CCTCCATTCAAACTCCTCCACCTGGGCTTCTAGTGCCTTGTGTGGCAGGAGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000081379.7 ENSMUST00000142230.8 ENSMUST00000146174.8 |
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| CDS-3UTR CCA 90 bp | ACCTCCTCCAGAGGCACCTGTAGACATCCTAAGGTAAATGGGGACAAATCTCCTGCTCCTGGGGGTATCTaGTCATCTGCCACAAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: TSSRGTCRHPKVNGDKSPAPGGI*SSATSE Trigger: TTCACTTGTGGCAGATGACCAGATACCCCCAGGAGC...AGGAGATTTGTCCCCATTTACCTTAGGATGTCTACAGGTGCCTCTGGAGGAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000081379.7 ENSMUST00000142230.8 ENSMUST00000146174.8 |
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| CDS-3UTR CCA 90 bp | GTCTCCCACTGTGCCTTCAAGCTACTGAGCACTGAGTGTCCTCTACCCAGCACCGAAAGTTGTAATTCATaGGATTGTAGGGAGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: VSHCAFKLLSTECPLPSTESCNS*DCREQA Trigger: AGCCTGCTCCCTACAATCCCATGAATTACAACTTTC...GGTGCTGGGTAGAGGACACTCAGTGCTCAGTAGCTTGAAGGCACAGTGGGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081379.7 ENSMUST00000146174.8 |
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| CDS-3UTR TCA 90 bp | ACTAGAAACTTGAGGAACAAACAGAGGGGTGGGTGCAAAGTCTACCCCAAGGGCTCACCAACCTGGGAATaGTTCAGTAATCTCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: TRNLRNKQRGGCKVYPKGSPTWE*FSNLQC Trigger: GCACTGGAGATTACTGAATCATTCCCAGGTTGGTGA...GCCCTTGGGGTAGACTTTGCACCCACCCCTCTGTTTGTTCCTCAAGTTTCTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081379.7 ENSMUST00000142230.8 ENSMUST00000146174.8 |
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| CDS-3UTR TCA 90 bp | GAACTGAGCACCTGGACAAGTACTCCAGATGTTCTCTGTAAGTCTCCCACTGTGTCACCAACCTGGGAATaGTTCAGTAATCTCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: ELSTWTSTPDVLCKSPTVSPTWE*FSNLQC Trigger: GCACTGGAGATTACTGAATCATTCCCAGGTTGGTGA...CACAGTGGGAGACTTACAGAGAACATCTGGAGTACTTGTCCAGGTGCTCAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081379.7 ENSMUST00000146174.8 |
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| CDS-3UTR TCA 90 bp | TTGAATGGAGGAGGGGTCTTAAGAAAAGCCATCTATAAGGTCAGGGCCAGAGGCTCACCAACCTGGGAATaGTTCAGTAATCTCCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: LNGGGVLRKAIYKVRARGSPTWE*FSNLQC Trigger: GCACTGGAGATTACTGAATCATTCCCAGGTTGGTGA...GCCTCTGGCCCTGACCTTATAGATGGCTTTTCTTAAGACCCCTCCTCCATTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081379.7 ENSMUST00000142230.8 ENSMUST00000146174.8 |
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| CDS-3UTR CCA 90 bp | ACTAGAAACTTGAGGAACAAACAGAGGGGTGGGTGCAAAGTCTACCCCAAGGGCGAAAGTTGTAATTCATaGGATTGTAGGGAGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: TRNLRNKQRGGCKVYPKGESCNS*DCREQA Trigger: AGCCTGCTCCCTACAATCCCATGAATTACAACTTTC...GCCCTTGGGGTAGACTTTGCACCCACCCCTCTGTTTGTTCCTCAAGTTTCTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000081379.7 ENSMUST00000142230.8 ENSMUST00000146174.8 |
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| CDS-3UTR GCA 90 bp | CAGAGGCACAAAGTGGGCAAGAGAAGATGCAGTTTGTCTCCAGCTAGGGAGAACACAAGTTTCCAGTTTTaGAACCATCCACAGTCTATG | + |
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Preference number: 4 (lower is better) Translates to: QRHKVGKRRCSLSPARENTSFQF*NHPQSM Trigger: CATAGACTGTGGATGGTTGCAAAACTGGAAACTTGT...GTTCTCCCTAGCTGGAGACAAACTGCATCTTCTCTTGCCCACTTTGTGCCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081379.7 ENSMUST00000146174.8 |
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| 3UTR CAA 72 bp | TCTGACCATGACAGAAGTTGCTGTAGAACTAGAAACTaGAGGAACAAACAGAGGGGTGGGTGCAAAGTCTAC | + |
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Preference number: 4 (lower is better) Translates to: SDHDRSCCRTRN*RNKQRGGCKVY Trigger: GTAGACTTTGCACCCACCCCTCTGTTTGTTCCTCAAGTTTCTAGTTCTACAGCAACTTCTGTCATGGTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081379.7 ENSMUST00000142230.8 ENSMUST00000146174.8 |
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| CDS-3UTR GCA 90 bp | TGTAGAACTAGAAACTTGAGGAACAAACAGAGGGGTGGGTGCAAAGTCTACCCCACAAGTTTCCAGTTTTaGAACCATCCACAGTCTATG | + |
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Preference number: 4 (lower is better) Translates to: CRTRNLRNKQRGGCKVYPTSFQF*NHPQSM Trigger: CATAGACTGTGGATGGTTGCAAAACTGGAAACTTGT...GGGGTAGACTTTGCACCCACCCCTCTGTTTGTTCCTCAAGTTTCTAGTTCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000081379.7 ENSMUST00000146174.8 |
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| CDS TCA 90 bp | TACTCCAGCATCAGGATCAGTTGCACTGTGTCACCAACCTGGGAATaGTTCAGTAATCTCCAGTGCATGGCATCTGTTCCCCGGTATGTG | + |
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Preference number: 5 (lower is better) Translates to: YSSIRISCTVSPTWE*FSNLQCMASVPRYV Trigger: CACATACCGGGGAACAGATGCCATGCACTGGAGATTACTGAATCATTCCCAGGTTGGTGACACAGTGCAACTGATCCTGATGCTGGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081379.7 ENSMUST00000142230.8 ENSMUST00000146174.8 |
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| CDS CCA 90 bp | AGTTGTAATTCATGGGATTGTAGGGAGCAGGCTCCTGGGGGTATCTaGTCATCTGCCACAAGTGAACAGTTACACATGTTTCAATCTTGT | + |
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Preference number: 5 (lower is better) Translates to: SCNSWDCREQAPGGI*SSATSEQLHMFQSC Trigger: ACAAGATTGAAACATGTGTAACTGTTCACTTGTGGCAGATGACCAGATACCCCCAGGAGCCTGCTCCCTACAATCCCATGAATTACAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000081379.7 ENSMUST00000142230.8 ENSMUST00000146174.8 |
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| CDS TCA 90 bp | CCACAAGTGAACAGTTACACATGTTTCAATCTTGTTGCAATATGGTaGATGAGAACAAGTTTCCAGTTTTGCAACCATCCACAGTCTATG | + |
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Preference number: 5 (lower is better) Translates to: PQVNSYTCFNLVAIW*MRTSFQFCNHPQSM Trigger: CATAGACTGTGGATGGTTGCAAAACTGGAAACTTGTTCTCATTCACCATATTGCAACAAGATTGAAACATGTGTAACTGTTCACTTGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081379.7 ENSMUST00000146174.8 |
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| CDS CCA 72 bp | TCATGGGATTGTAGGGAGCAGGCTCCTGGGGGTATCTaGTCATCTGCCACAAGTGAACAGTTACACATGTTT | + |
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Preference number: 6 (lower is better) Translates to: SWDCREQAPGGI*SSATSEQLHMF Trigger: AAACATGTGTAACTGTTCACTTGTGGCAGATGACCAGATACCCCCAGGAGCCTGCTCCCTACAATCCCATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000081379.7 ENSMUST00000142230.8 ENSMUST00000146174.8 |
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| CDS CCA 72 bp | CTAATCTCCACGTCATGGGTAGAAAGTTGTAATTCATaGGATTGTAGGGAGCAGGCTCCTGGGGGTATCTGG | + |
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Preference number: 6 (lower is better) Translates to: LISTSWVESCNS*DCREQAPGGIW Trigger: CCAGATACCCCCAGGAGCCTGCTCCCTACAATCCCATGAATTACAACTTTCTACCCATGACGTGGAGATTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000081379.7 ENSMUST00000142230.8 ENSMUST00000146174.8 |
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| CDS CCA 72 bp | TCCAGTGCATGGCATCTGTTCCCCGGTATGTGTTCATaGATGCTAATCTCCACGTCATGGGTAGAAAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: SSAWHLFPGMCS*MLISTSWVESC Trigger: ACAACTTTCTACCCATGACGTGGAGATTAGCATCCATGAACACATACCGGGGAACAGATGCCATGCACTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000081379.7 ENSMUST00000142230.8 ENSMUST00000146174.8 |
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| CDS TCA 72 bp | GCAGGCTCCTGGGGGTATCTGGTCATCTGCCACAAGTaGACAGTTACACATGTTTCAATCTTGTTGCAATAT | + |
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Preference number: 6 (lower is better) Translates to: AGSWGYLVICHK*TVTHVSILLQY Trigger: ATATTGCAACAAGATTGAAACATGTGTAACTGTTCACTTGTGGCAGATGACCAGATACCCCCAGGAGCCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000081379.7 ENSMUST00000142230.8 ENSMUST00000146174.8 |
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| CDS CAA 72 bp | TGTTGCAATATGGTGAATGAGAACAAGTTTCCAGTTTaGCAACCATCCACAGTCTATGATGTTCATCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: CCNMVNENKFPV*QPSTVYDVHPH Trigger: ATGAGGATGAACATCATAGACTGTGGATGGTTGCAAAACTGGAAACTTGTTCTCATTCACCATATTGCAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081379.7 ENSMUST00000146174.8 |
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| CDS TCA 72 bp | AACAGTTACACATGTTTCAATCTTGTTGCAATATGGTaGATGAGAACAAGTTTCCAGTTTTGCAACCATCCA | + |
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Preference number: 6 (lower is better) Translates to: NSYTCFNLVAIW*MRTSFQFCNHP Trigger: TGGATGGTTGCAAAACTGGAAACTTGTTCTCATTCACCATATTGCAACAAGATTGAAACATGTGTAACTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000081379.7 ENSMUST00000146174.8 |
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