Pregenerated sensors for TCL1B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066359Ensembl transcript IDs: ENSMUST00000085043.7, ENSMUST00000222342.2
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTTGCTGTAGAACTAGAAACTTGAGGAACAAACAGAGGGGTGGGTaGAAAGTCTACCCGAGGGCACAGGAGCAGGAGCCAGCCAGGCTA | + |
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Preference number: 1 (lower is better) Translates to: SCCRTRNLRNKQRGG*KVYPRAQEQEPARL Trigger: TAGCCTGGCTGGCTCCTGCTCCTGTGCCCTCGGGTAGACTTTGCACCCACCCCTCTGTTTGTTCCTCAAGTTTCTAGTTCTACAGCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085043.7 |
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| 3UTR CCA 90 bp | GGCCTAGGGTCAGATTCACTTCCTGGAGCCAAGGAACTGAGCACCTaGACAAGTACTCCAGATGTTCTCTGTAAGTCTCACACTGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: GLGSDSLPGAKELST*TSTPDVLCKSHTEP Trigger: AGGCTCAGTGTGAGACTTACAGAGAACATCTGGAGTACTTGTCCAGGTGCTCAGTTCCTTGGCTCCAGGAAGTGAATCTGACCCTAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085043.7 |
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| 3UTR CCA 90 bp | AAAAACAAGTTGGGGTGGGAGAGGCCTAGGGTCAGATTCACTTCCTaGAGCCAAGGAACTGAGCACCTGGACAAGTACTCCAGATGTTCT | + |
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Preference number: 1 (lower is better) Translates to: KNKLGWERPRVRFTS*SQGTEHLDKYSRCS Trigger: AGAACATCTGGAGTACTTGTCCAGGTGCTCAGTTCCTTGGCTCCAGGAAGTGAATCTGACCCTAGGCCTCTCCCACCCCAACTTGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085043.7 |
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| 3UTR CCA 90 bp | GTCTTAAGAAAAGCCATCTATAAGGTCAGGGCCAGAGACACAAAGTaGGCAAGAGAAGATGCAGTTTGTCTCCAGCTAGGGAGAACGGTC | + |
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Preference number: 1 (lower is better) Translates to: VLRKAIYKVRARDTK*AREDAVCLQLGRTV Trigger: GACCGTTCTCCCTAGCTGGAGACAAACTGCATCTTCTCTTGCCCACTTTGTGTCTCTGGCCCTGACCTTATAGATGGCTTTTCTTAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| 3UTR GCA 90 bp | CAGAAAGTAGATCATGTAAAAAGTAGGTCTGACCATGACAGAAGTTaGTGTAGAACTAGAAACTTGAGGAACAAACAGAGGGGTGGGTGC | + |
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Preference number: 1 (lower is better) Translates to: QKVDHVKSRSDHDRS*CRTRNLRNKQRGGC Trigger: GCACCCACCCCTCTGTTTGTTCCTCAAGTTTCTAGTTCTACAGCAACTTCTGTCATGGTCAGACCTACTTTTTACATGATCTACTTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085043.7 |
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| 3UTR CAA 90 bp | AAAAGTAGGTCTGACCATGACAGAAGTTGCTGTAGAACTAGAAACTaGAGGAACAAACAGAGGGGTGGGTGCAAAGTCTACCCGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: KSRSDHDRSCCRTRN*RNKQRGGCKVYPRA Trigger: TGCCCTCGGGTAGACTTTGCACCCACCCCTCTGTTTGTTCCTCAAGTTTCTAGTTCTACAGCAACTTCTGTCATGGTCAGACCTACTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085043.7 |
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| 3UTR CCA 72 bp | TTGGGGTGGGAGAGGCCTAGGGTCAGATTCACTTCCTaGAGCCAAGGAACTGAGCACCTGGACAAGTACTCC | + |
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Preference number: 3 (lower is better) Translates to: LGWERPRVRFTS*SQGTEHLDKYS Trigger: GGAGTACTTGTCCAGGTGCTCAGTTCCTTGGCTCCAGGAAGTGAATCTGACCCTAGGCCTCTCCCACCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085043.7 |
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| 3UTR GCA 72 bp | GGTCAGGGCCAGAGACACAAAGTGGGCAAGAGAAGATaGAGTTTGTCTCCAGCTAGGGAGAACGGTCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: GQGQRHKVGKRR*SLSPARENGQD Trigger: GTCCTGACCGTTCTCCCTAGCTGGAGACAAACTGCATCTTCTCTTGCCCACTTTGTGTCTCTGGCCCTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| 3UTR GCA 72 bp | AGAACTAGAAACTTGAGGAACAAACAGAGGGGTGGGTaGAAAGTCTACCCGAGGGCACAGGAGCAGGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: RTRNLRNKQRGG*KVYPRAQEQEP Trigger: TGGCTCCTGCTCCTGTGCCCTCGGGTAGACTTTGCACCCACCCCTCTGTTTGTTCCTCAAGTTTCTAGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085043.7 |
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| 3UTR CCA 72 bp | AAAGCCATCTATAAGGTCAGGGCCAGAGACACAAAGTaGGCAAGAGAAGATGCAGTTTGTCTCCAGCTAGGG | + |
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Preference number: 3 (lower is better) Translates to: KAIYKVRARDTK*AREDAVCLQLG Trigger: CCCTAGCTGGAGACAAACTGCATCTTCTCTTGCCCACTTTGTGTCTCTGGCCCTGACCTTATAGATGGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| 3UTR CCA 72 bp | TCAGATTCACTTCCTGGAGCCAAGGAACTGAGCACCTaGACAAGTACTCCAGATGTTCTCTGTAAGTCTCAC | + |
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Preference number: 3 (lower is better) Translates to: SDSLPGAKELST*TSTPDVLCKSH Trigger: GTGAGACTTACAGAGAACATCTGGAGTACTTGTCCAGGTGCTCAGTTCCTTGGCTCCAGGAAGTGAATCTGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085043.7 |
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| 3UTR TCA 72 bp | CTGACCATGACAGAAGTTGCTGTAGAACTAGAAACTTaGGGAACAAACAGAGGGGTGGGTGCAAAGTCTACC | + |
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Preference number: 3 (lower is better) Translates to: LTMTEVAVELET*GTNRGVGAKST Trigger: GGTAGACTTTGCACCCACCCCTCTGTTTGTTCCTCAAGTTTCTAGTTCTACAGCAACTTCTGTCATGGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085043.7 |
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| 3UTR GCA 72 bp | GATCATGTAAAAAGTAGGTCTGACCATGACAGAAGTTaGTGTAGAACTAGAAACTTGAGGAACAAACAGAGG | + |
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Preference number: 3 (lower is better) Translates to: DHVKSRSDHDRS*CRTRNLRNKQR Trigger: CCTCTGTTTGTTCCTCAAGTTTCTAGTTCTACAGCAACTTCTGTCATGGTCAGACCTACTTTTTACATGATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085043.7 |
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| CDS-3UTR CCA 90 bp | GACACAAAGTGGGCAAGAGAAGATGCAGTTTGTCTCCAGCTAGGGAGAACGGTCGGAGACCAGGTAGACTaGAAGTGGCCCCAGGGGATC | + |
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Preference number: 4 (lower is better) Translates to: DTKWAREDAVCLQLGRTVGDQVD*KWPQGI Trigger: GATCCCCTGGGGCCACTTCCAGTCTACCTGGTCTCC...GACCGTTCTCCCTAGCTGGAGACAAACTGCATCTTCTCTTGCCCACTTTGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| CDS-3UTR CCA 90 bp | CAAAGTCTACCCGAGGGCACAGGAGCAGGAGCCAGCCAGGCTATCAAGACCTTCAAGTGGACAGTTACATaGGTTCTCCTCCTGTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: QSLPEGTGAGASQAIKTFKWTVT*VLLLLP Trigger: TGGCAACAGGAGGAGAACCCATGTAACTGTCCACTT...GAAGGTCTTGATAGCCTGGCTGGCTCCTGCTCCTGTGCCCTCGGGTAGACTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085043.7 |
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| 3UTR CAA 72 bp | GGCCAGAGACACAAAGTGGGCAAGAGAAGATGCAGTTaGTCTCCAGCTAGGGAGAACGGTCAGGACCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: GQRHKVGKRRCS*SPARENGQDPN Trigger: GTTTGGGTCCTGACCGTTCTCCCTAGCTGGAGACAAACTGCATCTTCTCTTGCCCACTTTGTGTCTCTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| CDS-3UTR TCA 90 bp | AAGGTCAGGGCCAGAGACACAAAGTGGGCAAGAGAAGATGCAGTTTGTCTCCAGTCCAGTAATCTCCAGTaGGTCCCATCTGTTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: KVRARDTKWAREDAVCLQSSNLQ*VPSVAQ Trigger: CTGGGCAACAGATGGGACTCACTGGAGATTACTGGA...CTGGAGACAAACTGCATCTTCTCTTGCCCACTTTGTGTCTCTGGCCCTGACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| CDS-3UTR CCA 90 bp | GTCTTAAGAAAAGCCATCTATAAGGTCAGGGCCAGAGACACAAAGTGGGCAAGAGGAGACCAGGTAGACTaGAAGTGGCCCCAGGGGATC | + |
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Preference number: 4 (lower is better) Translates to: VLRKAIYKVRARDTKWARGDQVD*KWPQGI Trigger: GATCCCCTGGGGCCACTTCCAGTCTACCTGGTCTCC...TCTTGCCCACTTTGTGTCTCTGGCCCTGACCTTATAGATGGCTTTTCTTAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| CDS-3UTR CCA 90 bp | ACCACTGGAAGCACTAGAAGCCCAGGTGGAAGGAGTTTGAATGGAGGAGGGGTCCCCAGTATATGTTCCTaGACTCTAATTTCCACGTCG | + |
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Preference number: 4 (lower is better) Translates to: TTGSTRSPGGRSLNGGGVPSICS*TLISTS Trigger: CGACGTGGAAATTAGAGTCCAGGAACATATACTGGG...GACCCCTCCTCCATTCAAACTCCTTCCACCTGGGCTTCTAGTGCTTCCAGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| CDS-3UTR TCA 90 bp | TGTAGAACTAGAAACTTGAGGAACAAACAGAGGGGTGGGTGCAAAGTCTACCCGTCCAGTAATCTCCAGTaGGTCCCATCTGTTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: CRTRNLRNKQRGGCKVYPSSNLQ*VPSVAQ Trigger: CTGGGCAACAGATGGGACTCACTGGAGATTACTGGA...CGGGTAGACTTTGCACCCACCCCTCTGTTTGTTCCTCAAGTTTCTAGTTCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085043.7 |
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| CDS-3UTR GCA 90 bp | CAGAGACACAAAGTGGGCAAGAGAAGATGCAGTTTGTCTCCAGCTAGGGAGAACGGGTTCTCCTCCTGTTaGCATGTGATGAGTGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: QRHKVGKRRCSLSPARENGFSSC*HVMSEK Trigger: CTTCTCACTCATCACATGGCAACAGGAGGAGAACCC...GTTCTCCCTAGCTGGAGACAAACTGCATCTTCTCTTGCCCACTTTGTGTCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| CDS-3UTR CCA 90 bp | GGTCAGGGCCAGAGACACAAAGTGGGCAAGAGAAGATGCAGTTTGTCTCCAGCTCCCAGTATATGTTCCTaGACTCTAATTTCCACGTCG | + |
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Preference number: 4 (lower is better) Translates to: GQGQRHKVGKRRCSLSPAPSICS*TLISTS Trigger: CGACGTGGAAATTAGAGTCCAGGAACATATACTGGG...AGCTGGAGACAAACTGCATCTTCTCTTGCCCACTTTGTGTCTCTGGCCCTGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| CDS-3UTR TCA 90 bp | AGAAGATGCAGTTTGTCTCCAGCTAGGGAGAACGGTCAGGACCCAAACCAGGCTTTGCCATGTGATGAGTaGGAAGTTTCCACATTTGCA | + |
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Preference number: 4 (lower is better) Translates to: RRCSLSPARENGQDPNQALPCDE*EVSTFA Trigger: TGCAAATGTGGAAACTTCTCACTCATCACATGGCAA...AGCCTGGTTTGGGTCCTGACCGTTCTCCCTAGCTGGAGACAAACTGCATCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| CDS-3UTR CCA 90 bp | GGAGGGGTCTTAAGAAAAGCCATCTATAAGGTCAGGGCCAGAGACACAAAGTGGAAGTGGACAGTTACATaGGTTCTCCTCCTGTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: GGVLRKAIYKVRARDTKWKWTVT*VLLLLP Trigger: TGGCAACAGGAGGAGAACCCATGTAACTGTCCACTT...CCACTTTGTGTCTCTGGCCCTGACCTTATAGATGGCTTTTCTTAAGACCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| CDS-3UTR TCA 90 bp | GCCAGAGACACAAAGTGGGCAAGAGAAGATGCAGTTTGTCTCCAGCTAGGGAGATTGCCATGTGATGAGTaGGAAGTTTCCACATTTGCA | + |
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Preference number: 4 (lower is better) Translates to: ARDTKWAREDAVCLQLGRLPCDE*EVSTFA Trigger: TGCAAATGTGGAAACTTCTCACTCATCACATGGCAA...TCTCCCTAGCTGGAGACAAACTGCATCTTCTCTTGCCCACTTTGTGTCTCTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| CDS-3UTR GCA 90 bp | GTCTTAAGAAAAGCCATCTATAAGGTCAGGGCCAGAGACACAAAGTGGGCAAGAGGGTTCTCCTCCTGTTaGCATGTGATGAGTGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: VLRKAIYKVRARDTKWARGFSSC*HVMSEK Trigger: CTTCTCACTCATCACATGGCAACAGGAGGAGAACCC...TCTTGCCCACTTTGTGTCTCTGGCCCTGACCTTATAGATGGCTTTTCTTAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| CDS-3UTR GCA 90 bp | AGAGAAGATGCAGTTTGTCTCCAGCTAGGGAGAACGGTCAGGACCCAAACCAGGAGAAGTTTCCACATTTaGAACTATCCACACTCTATG | + |
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Preference number: 4 (lower is better) Translates to: REDAVCLQLGRTVRTQTRRSFHI*NYPHSM Trigger: CATAGAGTGTGGATAGTTGCAAATGTGGAAACTTCT...CCTGGTTTGGGTCCTGACCGTTCTCCCTAGCTGGAGACAAACTGCATCTTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| CDS-3UTR GCA 90 bp | GCCAGAGACACAAAGTGGGCAAGAGAAGATGCAGTTTGTCTCCAGCTAGGGAGAAGAAGTTTCCACATTTaGAACTATCCACACTCTATG | + |
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Preference number: 4 (lower is better) Translates to: ARDTKWAREDAVCLQLGRRSFHI*NYPHSM Trigger: CATAGAGTGTGGATAGTTGCAAATGTGGAAACTTCT...TCTCCCTAGCTGGAGACAAACTGCATCTTCTCTTGCCCACTTTGTGTCTCTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| CDS-3UTR CCA 90 bp | AGGAGTTTGAATGGAGGAGGGGTCTTAAGAAAAGCCATCTATAAGGTCAGGGCCATTAACTTCCACAAGTaGACAGTTACATGGGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: RSLNGGGVLRKAIYKVRAINFHK*TVTWVL Trigger: GAGAACCCATGTAACTGTCCACTTGTGGAAGTTAAT...GGCCCTGACCTTATAGATGGCTTTTCTTAAGACCCCTCCTCCATTCAAACTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| CDS-3UTR GCA 90 bp | CAGAAAGTAGATCATGTAAAAAGTAGGTCTGACCATGACAGAAGTTGCTGTAGAAGCATCAGGATCAGTTaGTCTGTGTCACCCAACTGG | + |
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Preference number: 4 (lower is better) Translates to: QKVDHVKSRSDHDRSCCRSIRIS*SVSPNW Trigger: CCAGTTGGGTGACACAGAGCAACTGATCCTGATGCT...TCTACAGCAACTTCTGTCATGGTCAGACCTACTTTTTACATGATCTACTTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085043.7 |
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| CDS-3UTR CAA 90 bp | GGTCAGGGCCAGAGACACAAAGTGGGCAAGAGAAGATGCAGTTTGTCTCCAGCTCAGCATCAGGATCAGTaGCTCTGTGTCACCCAACTG | + |
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Preference number: 5 (lower is better) Translates to: GQGQRHKVGKRRCSLSPAQHQDQ*LCVTQL Trigger: CAGTTGGGTGACACAGAGCAACTGATCCTGATGCTG...AGCTGGAGACAAACTGCATCTTCTCTTGCCCACTTTGTGTCTCTGGCCCTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085043.7 |
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| CDS GCA 90 bp | GGATTAACTTCCACAAGTGGACAGTTACATGGGTTCTCCTCCTGTTaGCATGTGATGAGTGAGAAGTTTCCACATTTGCAACTATCCACA | + |
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Preference number: 5 (lower is better) Translates to: GLTSTSGQLHGFSSC*HVMSEKFPHLQLST Trigger: TGTGGATAGTTGCAAATGTGGAAACTTCTCACTCATCACATGGCAACAGGAGGAGAACCCATGTAACTGTCCACTTGTGGAAGTTAATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| CDS CAA 90 bp | CACCCAACTGGGAATGATCCAGTAATCTCCAGTGAGTCCCATCTGTaGCCCAGTATATGTTCCTGGACTCTAATTTCCACGTCGTGGGTA | + |
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Preference number: 6 (lower is better) Translates to: HPTGNDPVISSESHL*PSICSWTLISTSWV Trigger: TACCCACGACGTGGAAATTAGAGTCCAGGAACATATACTGGGCAACAGATGGGACTCACTGGAGATTACTGGATCATTCCCAGTTGGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085043.7 |
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| CDS CCA 72 bp | AAGGGAATAACCTGCTGGGGGATTAACTTCCACAAGTaGACAGTTACATGGGTTCTCCTCCTGTTGCCATGT | + |
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Preference number: 6 (lower is better) Translates to: KGITCWGINFHK*TVTWVLLLLPC Trigger: ACATGGCAACAGGAGGAGAACCCATGTAACTGTCCACTTGTGGAAGTTAATCCCCCAGCAGGTTATTCCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| CDS CAA 90 bp | TCAAGACCTGGGAATGATCCAGTAATCTCCAGTGAGTCCCATCTGTaGCCCAGTATATGTTCCTGGACTCTAATTTCCACGTCGTGGGTA | + |
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Preference number: 6 (lower is better) Translates to: SRPGNDPVISSESHL*PSICSWTLISTSWV Trigger: TACCCACGACGTGGAAATTAGAGTCCAGGAACATATACTGGGCAACAGATGGGACTCACTGGAGATTACTGGATCATTCCCAGGTCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222342.2 |
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| CDS CAA 72 bp | GGGAATGATCCAGTAATCTCCAGTGAGTCCCATCTGTaGCCCAGTATATGTTCCTGGACTCTAATTTCCACG | + |
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Preference number: 6 (lower is better) Translates to: GNDPVISSESHL*PSICSWTLIST Trigger: CGTGGAAATTAGAGTCCAGGAACATATACTGGGCAACAGATGGGACTCACTGGAGATTACTGGATCATTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| CDS CAA 90 bp | GGGTTCTCCTCCTGTTGCCATGTGATGAGTGAGAAGTTTCCACATTaGCAACTATCCACACTCTATGATGTTCATCCTCATAGATGCCCA | + |
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Preference number: 6 (lower is better) Translates to: GFSSCCHVMSEKFPH*QLSTLYDVHPHRCP Trigger: TGGGCATCTATGAGGATGAACATCATAGAGTGTGGATAGTTGCAAATGTGGAAACTTCTCACTCATCACATGGCAACAGGAGGAGAACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| CDS TCA 72 bp | GTTACATGGGTTCTCCTCCTGTTGCCATGTGATGAGTaGGAAGTTTCCACATTTGCAACTATCCACACTCTA | + |
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Preference number: 6 (lower is better) Translates to: VTWVLLLLPCDE*EVSTFATIHTL Trigger: TAGAGTGTGGATAGTTGCAAATGTGGAAACTTCTCACTCATCACATGGCAACAGGAGGAGAACCCATGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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| CDS CAA 72 bp | TCCTGTTGCCATGTGATGAGTGAGAAGTTTCCACATTaGCAACTATCCACACTCTATGATGTTCATCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: SCCHVMSEKFPH*QLSTLYDVHPH Trigger: ATGAGGATGAACATCATAGAGTGTGGATAGTTGCAAATGTGGAAACTTCTCACTCATCACATGGCAACAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085043.7 ENSMUST00000222342.2 |
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