Pregenerated sensors for TCL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041359Ensembl transcript IDs: ENSMUST00000041316.15, ENSMUST00000101071.4, ENSMUST00000175652.2, ENSMUST00000176579.2, ENSMUST00000177521.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACTGGGATCTTCTCTGGAGCCCCTTGCCAGGGAGTCAGCAGAGCTaGGGGACCAACCAAGGCAGCCGAGCAGGCAACAGCAGCATGGGA | + |
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Preference number: 1 (lower is better) Translates to: NWDLLWSPLPGSQQS*GTNQGSRAGNSSMG Trigger: TCCCATGCTGCTGTTGCCTGCTCGGCTGCCTTGGTTGGTCCCTCAGCTCTGCTGACTCCCTGGCAAGGGGCTCCAGAGAAGATCCCAGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000176579.2 |
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| 3UTR CCA 90 bp | AGAGCTGAGGGACCAACCAAGGCAGCCGAGCAGGCAACAGCAGCATaGGAAGGGGCAGCGTCTGGCCAGAGTTTTCTTCTTGGAGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: RAEGPTKAAEQATAA*EGAASGQSFLLGAQ Trigger: CTGGGCTCCAAGAAGAAAACTCTGGCCAGACGCTGCCCCTTCCCATGCTGCTGTTGCCTGCTCGGCTGCCTTGGTTGGTCCCTCAGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041316.15 ENSMUST00000175652.2 ENSMUST00000176579.2 |
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| 3UTR CCA 90 bp | GGGGCCAGGCCTGGGCAAGGCAGACAGGAGCTGCAGGACCGGGTCTaGGTTATTCATCGTTGGACTCCGAGTCTATCAGTTCAAGCAACA | + |
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Preference number: 1 (lower is better) Translates to: GARPGQGRQELQDRV*VIHRWTPSLSVQAT Trigger: TGTTGCTTGAACTGATAGACTCGGAGTCCAACGATGAATAACCCAGACCCGGTCCTGCAGCTCCTGTCTGCCTTGCCCAGGCCTGGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177521.2 |
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| 3UTR CCA 90 bp | GACAAGCGAGTGGTCAGACCAGCCCTGGGAATTCCCCTTTCTTTCTaGCTCAGCTTTCTTCAGCCTGGGTTAGTACTGGGTCCTGAGGTG | + |
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Preference number: 1 (lower is better) Translates to: DKRVVRPALGIPLSF*LSFLQPGLVLGPEV Trigger: CACCTCAGGACCCAGTACTAACCCAGGCTGAAGAAAGCTGAGCCAGAAAGAAAGGGGAATTCCCAGGGCTGGTCTGACCACTCGCTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177521.2 |
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| 3UTR CCA 90 bp | GGCTTCTCTGGGAGACCCCGGAGCAGTCTTCTCTCCCTCATTTATTaGCATCTCGGTCAAGGATGGAAGCCGATTTGGCCCAACTTAGGT | + |
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Preference number: 1 (lower is better) Translates to: GFSGRPRSSLLSLIY*HLGQGWKPIWPNLG Trigger: ACCTAAGTTGGGCCAAATCGGCTTCCATCCTTGACCGAGATGCCAATAAATGAGGGAGAGAAGACTGCTCCGGGGTCTCCCAGAGAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| 3UTR CCA 90 bp | CACACATTCCCTTTCAACATTCTTACTAGGAGACCAAGGCTTCCCTaGGTGACCCTGGCTTCTCTGGGAGACCCCGGAGCAGTCTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: HTFPFNILTRRPRLP*VTLASLGDPGAVFS Trigger: AGAGAAGACTGCTCCGGGGTCTCCCAGAGAAGCCAGGGTCACCCAGGGAAGCCTTGGTCTCCTAGTAAGAATGTTGAAAGGGAATGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| 3UTR-3UTR CCA 90 bp | GCCGAGCAGGCAACAGCAGCATGGGAAGGGGCAGCGTCTGGCCAGAGTTTTCTTCTGTGGGGCCAGGCCTaGGCAAGGCAGACAGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: AEQATAAWEGAASGQSFLLWGQA*ARQTGA Trigger: AGCTCCTGTCTGCCTTGCCCAGGCCTGGCCCCACAG...AAGAAAACTCTGGCCAGACGCTGCCCCTTCCCATGCTGCTGTTGCCTGCTCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000041316.15 ENSMUST00000175652.2 ENSMUST00000176579.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAGTACCAACATCTCCCCTGTGGGGCCAGGCCTGGGCAAGGCAGACAGGAGCCCAACATCTCCCCTGTaGGGCCAGGCCTGGGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: ISTNISPVGPGLGKADRSPTSPL*GQAWAR Trigger: CCTTGCCCAGGCCTGGCCCCACAGGGGAGATGTTGG...GCTCCTGTCTGCCTTGCCCAGGCCTGGCCCCACAGGGGAGATGTTGGTACTTAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000041316.15 ENSMUST00000175652.2 ENSMUST00000176579.2 ENSMUST00000177521.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGCTTCCCTGGGTGACCCTGGCTTCTCTGGGAGACCCCGGAGCAGTCTTCTCGCACAACACCTTGAGTaGTGGCTGATCTGGGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: KASLGDPGFSGRPRSSLLAQHLE*WLIWGL Trigger: CAGGCCCCAGATCAGCCATCACTCAAGGTGTTGTGC...GAGAAGACTGCTCCGGGGTCTCCCAGAGAAGCCAGGGTCACCCAGGGAAGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| 3UTR-3UTR CCA 90 bp | CTGAACACCCAGAGAGGAAGCCTGCACACAGGCAATCAGAGGGCCCATCTGAACCCAACATCTCCCCTGTaGGGCCAGGCCTGGGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: LNTQRGSLHTGNQRAHLNPTSPL*GQAWAR Trigger: CCTTGCCCAGGCCTGGCCCCACAGGGGAGATGTTGG...GTTCAGATGGGCCCTCTGATTGCCTGTGTGCAGGCTTCCTCTCTGGGTGTTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041316.15 |
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| 3UTR-3UTR CCA 90 bp | GAACAGACAGAACATAAGTACCAACATCTCCCCTGTGGGGCCAGGCCTGGGCAACTGTGGGGCCAGGCCTaGGCAAGGCAGACAGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: EQTEHKYQHLPCGARPGQLWGQA*ARQTGA Trigger: AGCTCCTGTCTGCCTTGCCCAGGCCTGGCCCCACAG...TTGCCCAGGCCTGGCCCCACAGGGGAGATGTTGGTACTTATGTTCTGTCTGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000041316.15 ENSMUST00000175652.2 ENSMUST00000176579.2 ENSMUST00000177521.2 |
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| 3UTR-3UTR TCA 90 bp | GAACAGACAGAACATAAGTACCAACATCTCCCCTGTGGGGCCAGGCCTGGGCAAGGGAGTCAGCAGAGCTaGGGGACCAACCAAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: EQTEHKYQHLPCGARPGQGSQQS*GTNQGS Trigger: GCTGCCTTGGTTGGTCCCTCAGCTCTGCTGACTCCC...TTGCCCAGGCCTGGCCCCACAGGGGAGATGTTGGTACTTATGTTCTGTCTGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000041316.15 ENSMUST00000175652.2 ENSMUST00000176579.2 |
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| 3UTR-3UTR CCA 90 bp | GCGAACAGACAGAACATAAGTACCAACATCTCCCCTGTGGGGCCAGGCCTGGGCGGTCCTGAGGTGAGGTaGCTAGCCCTCTCAACTGGT | + |
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Preference number: 2 (lower is better) Translates to: ANRQNISTNISPVGPGLGGPEVR*LALSTG Trigger: ACCAGTTGAGAGGGCTAGCCACCTCACCTCAGGACC...GCCCAGGCCTGGCCCCACAGGGGAGATGTTGGTACTTATGTTCTGTCTGTTCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177521.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTCTCTGGGAGACCCCGGAGCAGTCTTCTCTCCCTCATTTATTGGCATCTACCTTGAGTGATGGCTaGTCTGGGGCCTGGCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: WLLWETPEQSSLPHLLASTLSDG*SGAWPD Trigger: ATCTGGCCAGGCCCCAGATCAGCCATCACTCAAGGT...AGATGCCAATAAATGAGGGAGAGAAGACTGCTCCGGGGTCTCCCAGAGAAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| 3UTR-3UTR GCA 90 bp | TGGGAGACCCCGGAGCAGTCTTCTCTCCCTCATTTATTGGCATCTCGGTCAAGGCATAGGCCCCAGGTTTaGATATCCCTGGCTGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: WETPEQSSLPHLLASRSRHRPQV*ISLAAS Trigger: GCTTGCAGCCAGGGATATGCAAACCTGGGGCCTATG...CCTTGACCGAGATGCCAATAAATGAGGGAGAGAAGACTGCTCCGGGGTCTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| 3UTR-3UTR CCA 90 bp | CAGACAGAACATAAGTACCAACATCTCCCCTGTGGGGCCAGGCCTGGGCAAGGCTGGTCAGACCAGCCCTaGGAATTCCCCTTTCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: QTEHKYQHLPCGARPGQGWSDQP*EFPFLS Trigger: AGAAAGAAAGGGGAATTCCCAGGGCTGGTCTGACCA...GCCTTGCCCAGGCCTGGCCCCACAGGGGAGATGTTGGTACTTATGTTCTGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000177521.2 |
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| 3UTR CAA 90 bp | TGGCTTCTCTGGGAGACCCCGGAGCAGTCTTCTCTCCCTCATTTATaGGCATCTCGGTCAAGGATGGAAGCCGATTTGGCCCAACTTAGG | + |
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Preference number: 2 (lower is better) Translates to: WLLWETPEQSSLPHL*ASRSRMEADLAQLR Trigger: CCTAAGTTGGGCCAAATCGGCTTCCATCCTTGACCGAGATGCCAATAAATGAGGGAGAGAAGACTGCTCCGGGGTCTCCCAGAGAAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| 3UTR-3UTR GCA 90 bp | CCCCGGAGCAGTCTTCTCTCCCTCATTTATTGGCATCTCGGTCAAGGATGGAAGCTGAACCAGGCCCACTaGCTGGCCTCTTGTTCTAGT | + |
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Preference number: 2 (lower is better) Translates to: PRSSLLSLIYWHLGQGWKLNQAH*LASCSS Trigger: ACTAGAACAAGAGGCCAGGCAGTGGGCCTGGTTCAG...CTTCCATCCTTGACCGAGATGCCAATAAATGAGGGAGAGAAGACTGCTCCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| 3UTR-3UTR CCA 90 bp | CCGGAGCAGTCTTCTCTCCCTCATTTATTGGCATCTCGGTCAAGGATGGAAGCCAACTGGGATCTTCTCTaGAGCCCCTTGCCAGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: PEQSSLPHLLASRSRMEANWDLL*SPLPGS Trigger: ACTCCCTGGCAAGGGGCTCCAGAGAAGATCCCAGTT...GGCTTCCATCCTTGACCGAGATGCCAATAAATGAGGGAGAGAAGACTGCTCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041316.15 |
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| 3UTR-3UTR TCA 90 bp | CACACATTCCCTTTCAACATTCTTACTAGGAGACCAAGGCTTCCCTGGGTGACCACCTTGAGTGATGGCTaGTCTGGGGCCTGGCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: HTFPFNILTRRPRLPWVTTLSDG*SGAWPD Trigger: ATCTGGCCAGGCCCCAGATCAGCCATCACTCAAGGT...GGTCACCCAGGGAAGCCTTGGTCTCCTAGTAAGAATGTTGAAAGGGAATGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| 3UTR-3UTR TCA 90 bp | CACACATTCCCTTTCAACATTCTTACTAGGAGACCAAGGCTTCCCTGGGTGACCACAGGCACAACACCTTaGGTGATGGCTGATCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: HTFPFNILTRRPRLPWVTTGTTP*VMADLG Trigger: CCCCAGATCAGCCATCACTCAAGGTGTTGTGCCTGT...GGTCACCCAGGGAAGCCTTGGTCTCCTAGTAAGAATGTTGAAAGGGAATGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| 3UTR-3UTR TCA 90 bp | TGGGAGACCCCGGAGCAGTCTTCTCTCCCTCATTTATTGGCATCTCGGTCAAGGACTAAATACAGAACCTaGACACCCAGAGAGGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: WETPEQSSLPHLLASRSRTKYRT*TPREEA Trigger: GGCTTCCTCTCTGGGTGTTCAGGTTCTGTATTTAGT...CCTTGACCGAGATGCCAATAAATGAGGGAGAGAAGACTGCTCCGGGGTCTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| 3UTR-3UTR CCA 90 bp | CCCCGGAGCAGTCTTCTCTCCCTCATTTATTGGCATCTCGGTCAAGGATGGAAGAGGTTTGCATATCCCTaGCTGCAAGCACCTAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: PRSSLLSLIYWHLGQGWKRFAYP*LQAPRF Trigger: GAACCTAGGTGCTTGCAGCCAGGGATATGCAAACCT...CTTCCATCCTTGACCGAGATGCCAATAAATGAGGGAGAGAAGACTGCTCCGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| 3UTR-3UTR TCA 90 bp | GCAGTCTTCTCTCCCTCATTTATTGGCATCTCGGTCAAGGATGGAAGCCGATTTCTGCTGAGGGACCCGTaGGGAAGAAGGCAAGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: AVFSPSFIGISVKDGSRFLLRDP*GRRQVH Trigger: ATGAACTTGCCTTCTTCCTCACGGGTCCCTCAGCAG...AAATCGGCTTCCATCCTTGACCGAGATGCCAATAAATGAGGGAGAGAAGACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| 3UTR-3UTR TCA 90 bp | CCCCGGAGCAGTCTTCTCTCCCTCATTTATTGGCATCTCGGTCAAGGATGGAAGACTAAATACAGAACCTaGACACCCAGAGAGGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: PRSSLLSLIYWHLGQGWKTKYRT*TPREEA Trigger: GGCTTCCTCTCTGGGTGTTCAGGTTCTGTATTTAGT...CTTCCATCCTTGACCGAGATGCCAATAAATGAGGGAGAGAAGACTGCTCCGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| 3UTR-3UTR GCA 90 bp | CTTCTCTGGGAGACCCCGGAGCAGTCTTCTCTCCCTCATTTATTGGCATCTCGGGGTCTTACACCGCTCTaGAATCAAAGCCTATGTTTG | + |
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Preference number: 2 (lower is better) Translates to: LLWETPEQSSLPHLLASRGLTPL*NQSLCL Trigger: CAAACATAGGCTTTGATTGCAGAGCGGTGTAAGACC...CCGAGATGCCAATAAATGAGGGAGAGAAGACTGCTCCGGGGTCTCCCAGAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| 3UTR-3UTR CCA 90 bp | CACACATTCCCTTTCAACATTCTTACTAGGAGACCAAGGCTTCCCTGGGTGACCCATCTCGGTCAAGGATaGAAGCCGATTTGGCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: HTFPFNILTRRPRLPWVTHLGQG*KPIWPN Trigger: GTTGGGCCAAATCGGCTTCCATCCTTGACCGAGATG...GGTCACCCAGGGAAGCCTTGGTCTCCTAGTAAGAATGTTGAAAGGGAATGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| 3UTR TCA 72 bp | CTTCTCTGGAGCCCCTTGCCAGGGAGTCAGCAGAGCTaGGGGACCAACCAAGGCAGCCGAGCAGGCAACAGC | + |
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Preference number: 3 (lower is better) Translates to: LLWSPLPGSQQS*GTNQGSRAGNS Trigger: GCTGTTGCCTGCTCGGCTGCCTTGGTTGGTCCCTCAGCTCTGCTGACTCCCTGGCAAGGGGCTCCAGAGAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000176579.2 |
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| 3UTR TCA 72 bp | GAGGAAGCCTGCACACAGGCAATCAGAGGGCCCATCTaGACCAGGCCCACTGCCTGGCCTCTTGTTCTAGTG | + |
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Preference number: 3 (lower is better) Translates to: EEACTQAIRGPI*TRPTAWPLVLV Trigger: CACTAGAACAAGAGGCCAGGCAGTGGGCCTGGTTCAGATGGGCCCTCTGATTGCCTGTGTGCAGGCTTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| 3UTR TCA 72 bp | TCAGGTGGGTACAGGCACAACACCTTGAGTGATGGCTaGTCTGGGGCCTGGCCAGATTCCAATGACGAGGTC | + |
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Preference number: 3 (lower is better) Translates to: SGGYRHNTLSDG*SGAWPDSNDEV Trigger: GACCTCGTCATTGGAATCTGGCCAGGCCCCAGATCAGCCATCACTCAAGGTGTTGTGCCTGTACCCACCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| 3UTR CCA 72 bp | GGGAGACCCCGGAGCAGTCTTCTCTCCCTCATTTATTaGCATCTCGGTCAAGGATGGAAGCCGATTTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: GRPRSSLLSLIY*HLGQGWKPIWP Trigger: GGGCCAAATCGGCTTCCATCCTTGACCGAGATGCCAATAAATGAGGGAGAGAAGACTGCTCCGGGGTCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| 3UTR CCA 72 bp | CCTTTCAACATTCTTACTAGGAGACCAAGGCTTCCCTaGGTGACCCTGGCTTCTCTGGGAGACCCCGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: PFNILTRRPRLP*VTLASLGDPGA Trigger: TGCTCCGGGGTCTCCCAGAGAAGCCAGGGTCACCCAGGGAAGCCTTGGTCTCCTAGTAAGAATGTTGAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| 3UTR CCA 72 bp | CCTGGGCAAGGCAGACAGGAGCTGCAGGACCGGGTCTaGGTTATTCATCGTTGGACTCCGAGTCTATCAGTT | + |
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Preference number: 3 (lower is better) Translates to: PGQGRQELQDRV*VIHRWTPSLSV Trigger: AACTGATAGACTCGGAGTCCAACGATGAATAACCCAGACCCGGTCCTGCAGCTCCTGTCTGCCTTGCCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177521.2 |
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| 3UTR-3UTR CAA 90 bp | TGGCTTCTCTGGGAGACCCCGGAGCAGTCTTCTCTCCCTCATTTATTGGCATCTTCCAATGACGAGGTCTaGTCCCTCATGGTGTATGTA | + |
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Preference number: 3 (lower is better) Translates to: WLLWETPEQSSLPHLLASSNDEV*SLMVYV Trigger: TACATACACCATGAGGGACAAGACCTCGTCATTGGA...AGATGCCAATAAATGAGGGAGAGAAGACTGCTCCGGGGTCTCCCAGAGAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| 3UTR TCA 72 bp | ATGACGAGGTCTTGTCCCTCATGGTGTATGTACTGCTaGGGGACCCGTGAGGAAGAAGGCAAGTTCATAAGT | + |
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Preference number: 3 (lower is better) Translates to: MTRSCPSWCMYC*GTREEEGKFIS Trigger: ACTTATGAACTTGCCTTCTTCCTCACGGGTCCCTCAGCAGTACATACACCATGAGGGACAAGACCTCGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| 3UTR TCA 72 bp | AGGCAAGTTCATAAGTCAGAGACACTAGTTGTCTTGTaGGGCCAAAGGGAAAGACGGAAGAGTCAATCAGCT | + |
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Preference number: 3 (lower is better) Translates to: RQVHKSETLVVL*GQRERRKSQSA Trigger: AGCTGATTGACTCTTCCGTCTTTCCCTTTGGCCTCACAAGACAACTAGTGTCTCTGACTTATGAACTTGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000176579.2 |
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| CDS-3UTR GCA 90 bp | CCAAGGCAGCCGAGCAGGCAACAGCAGCATGGGAAGGGGCAGCGTCTGGCCAGACAGGCGGTTGGGGTGTaGAGGTGTCTCTGCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: PRQPSRQQQHGKGQRLARQAVGV*RCLCPV Trigger: CACAGGGCAGAGACACCTGCACACCCCAACCGCCTG...TCTGGCCAGACGCTGCCCCTTCCCATGCTGCTGTTGCCTGCTCGGCTGCCTTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041316.15 ENSMUST00000175652.2 ENSMUST00000176579.2 |
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| CDS-3UTR GCA 90 bp | CCTTGCCAGGGAGTCAGCAGAGCTGAGGGACCAACCAAGGCAGCCGAGCAGGCACAGGCGGTTGGGGTGTaGAGGTGTCTCTGCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: PCQGVSRAEGPTKAAEQAQAVGV*RCLCPV Trigger: CACAGGGCAGAGACACCTGCACACCCCAACCGCCTG...TGCCTGCTCGGCTGCCTTGGTTGGTCCCTCAGCTCTGCTGACTCCCTGGCAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000176579.2 |
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| CDS-3UTR CCA 90 bp | CTGAACCAGGCCCACTGCCTGGCCTCTTGTTCTAGTGAGGCCATAGGCCCCAGGCCAACATCTCCCCTGTaGGGCCAGGCCTGGGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: LNQAHCLASCSSEAIGPRPTSPL*GQAWAR Trigger: CCTTGCCCAGGCCTGGCCCCACAGGGGAGATGTTGG...CCTGGGGCCTATGGCCTCACTAGAACAAGAGGCCAGGCAGTGGGCCTGGTTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101071.4 |
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| CDS-3UTR GCA 90 bp | ATAAGTACCAACATCTCCCCTGTGGGGCCAGGCCTGGGCAAGGCAGACAGGAGCCAGGCGGTTGGGGTGTaGAGGTGTCTCTGCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: ISTNISPVGPGLGKADRSQAVGV*RCLCPV Trigger: CACAGGGCAGAGACACCTGCACACCCCAACCGCCTG...GCTCCTGTCTGCCTTGCCCAGGCCTGGCCCCACAGGGGAGATGTTGGTACTTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000041316.15 ENSMUST00000175652.2 ENSMUST00000176579.2 ENSMUST00000177521.2 |
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| CDS-3UTR CCA 90 bp | GCCAGGGAGTCAGCAGAGCTGAGGGACCAACCAAGGCAGCCGAGCAGGCAACAGAGATCCACAGGCGGTTaGGGTGTGCAGGTGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: ARESAELRDQPRQPSRQQRSTGG*GVQVSL Trigger: CAGAGACACCTGCACACCCCAACCGCCTGTGGATCT...CTGTTGCCTGCTCGGCTGCCTTGGTTGGTCCCTCAGCTCTGCTGACTCCCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000176579.2 |
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| CDS-3UTR CCA 90 bp | CAGCCGAGCAGGCAACAGCAGCATGGGAAGGGGCAGCGTCTGGCCAGAGTTTTCAGATCCACAGGCGGTTaGGGTGTGCAGGTGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: QPSRQQQHGKGQRLARVFRSTGG*GVQVSL Trigger: CAGAGACACCTGCACACCCCAACCGCCTGTGGATCT...GAAAACTCTGGCCAGACGCTGCCCCTTCCCATGCTGCTGTTGCCTGCTCGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041316.15 ENSMUST00000175652.2 ENSMUST00000176579.2 |
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| CDS-3UTR CCA 90 bp | TGCCAGGGAGTCAGCAGAGCTGAGGGACCAACCAAGGCAGCCGAGCAGGCAACAAGATCCACAGGCGGTTaGGGTGTGCAGGTGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: CQGVSRAEGPTKAAEQATRSTGG*GVQVSL Trigger: CAGAGACACCTGCACACCCCAACCGCCTGTGGATCT...TGTTGCCTGCTCGGCTGCCTTGGTTGGTCCCTCAGCTCTGCTGACTCCCTGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000176579.2 |
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| CDS-3UTR GCA 90 bp | AGACAGAACATAAGTACCAACATCTCCCCTGTGGGGCCAGGCCTGGGCAAGGCACAGGCGGTTGGGGTGTaGAGGTGTCTCTGCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: RQNISTNISPVGPGLGKAQAVGV*RCLCPV Trigger: CACAGGGCAGAGACACCTGCACACCCCAACCGCCTG...TGCCTTGCCCAGGCCTGGCCCCACAGGGGAGATGTTGGTACTTATGTTCTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000041316.15 ENSMUST00000175652.2 ENSMUST00000176579.2 ENSMUST00000177521.2 |
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| CDS-3UTR GCA 90 bp | CAAGGCAGCCGAGCAGGCAACAGCAGCATGGGAAGGGGCAGCGTCTGGCCAGAGTCATCCAAGTACACGTaGTTCTCCCAGATCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: QGSRAGNSSMGRGSVWPESSKYT*FSQIHR Trigger: CCTGTGGATCTGGGAGAAGCACGTGTACTTGGATGA...CTCTGGCCAGACGCTGCCCCTTCCCATGCTGCTGTTGCCTGCTCGGCTGCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041316.15 ENSMUST00000175652.2 ENSMUST00000176579.2 |
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| CDS-3UTR CCA 90 bp | TGGGAGACCCCGGAGCAGTCTTCTCTCCCTCATTTATTGGCATCTCGGTCAAGGCTGTGGGGCCAGGCCTaGGCAAGGCAGACAGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: WETPEQSSLPHLLASRSRLWGQA*ARQTGA Trigger: AGCTCCTGTCTGCCTTGCCCAGGCCTGGCCCCACAG...CCTTGACCGAGATGCCAATAAATGAGGGAGAGAAGACTGCTCCGGGGTCTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101071.4 |
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| CDS-3UTR TCA 90 bp | GGGAGACCCCGGAGCAGTCTTCTCTCCCTCATTTATTGGCATCTCGGTCAAGGAGGGAGTCAGCAGAGCTaGGGGACCAACCAAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GRPRSSLLSLIYWHLGQGGSQQS*GTNQGS Trigger: GCTGCCTTGGTTGGTCCCTCAGCTCTGCTGACTCCC...TCCTTGACCGAGATGCCAATAAATGAGGGAGAGAAGACTGCTCCGGGGTCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101071.4 |
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| CDS-3UTR GCA 90 bp | GGGAGACCCCGGAGCAGTCTTCTCTCCCTCATTTATTGGCATCTCGGTCAAGGACAGGCGGTTGGGGTGTaGAGGTGTCTCTGCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: GRPRSSLLSLIYWHLGQGQAVGV*RCLCPV Trigger: CACAGGGCAGAGACACCTGCACACCCCAACCGCCTG...TCCTTGACCGAGATGCCAATAAATGAGGGAGAGAAGACTGCTCCGGGGTCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| CDS-3UTR GCA 90 bp | AAGGCAGCCGAGCAGGCAACAGCAGCATGGGAAGGGGCAGCGTCTGGCCAGAGTTCATCCAAGTACACGTaGTTCTCCCAGATCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: KAAEQATAAWEGAASGQSSSKYT*FSQIHR Trigger: CCTGTGGATCTGGGAGAAGCACGTGTACTTGGATGA...ACTCTGGCCAGACGCTGCCCCTTCCCATGCTGCTGTTGCCTGCTCGGCTGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041316.15 ENSMUST00000175652.2 ENSMUST00000176579.2 |
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| CDS-3UTR CCA 90 bp | AACATAAGTACCAACATCTCCCCTGTGGGGCCAGGCCTGGGCAAGGCAGACAGGAGATCCACAGGCGGTTaGGGTGTGCAGGTGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: NISTNISPVGPGLGKADRRSTGG*GVQVSL Trigger: CAGAGACACCTGCACACCCCAACCGCCTGTGGATCT...CCTGTCTGCCTTGCCCAGGCCTGGCCCCACAGGGGAGATGTTGGTACTTATGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041316.15 ENSMUST00000175652.2 ENSMUST00000176579.2 ENSMUST00000177521.2 |
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| CDS-3UTR CCA 90 bp | ACCCAGAGAGGAAGCCTGCACACAGGCAATCAGAGGGCCCATCTGAACCAGGCCAACTGGGATCTTCTCTaGAGCCCCTTGCCAGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: TQRGSLHTGNQRAHLNQANWDLL*SPLPGS Trigger: ACTCCCTGGCAAGGGGCTCCAGAGAAGATCCCAGTT...GGCCTGGTTCAGATGGGCCCTCTGATTGCCTGTGTGCAGGCTTCCTCTCTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101071.4 |
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| CDS-3UTR GCA 90 bp | TGCCAGGGAGTCAGCAGAGCTGAGGGACCAACCAAGGCAGCCGAGCAGGCAACATCATCCAAGTACACGTaGTTCTCCCAGATCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: CQGVSRAEGPTKAAEQATSSKYT*FSQIHR Trigger: CCTGTGGATCTGGGAGAAGCACGTGTACTTGGATGA...TGTTGCCTGCTCGGCTGCCTTGGTTGGTCCCTCAGCTCTGCTGACTCCCTGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000176579.2 |
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| CDS-3UTR GCA 90 bp | AAGGCTTCCCTGGGTGACCCTGGCTTCTCTGGGAGACCCCGGAGCAGTCTTCTCTCCTTGGGGTACAGTTaGCACATTAAAGGCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: KASLGDPGFSGRPRSSLLSLGYS*HIKGSS Trigger: CGAGCTGCCTTTAATGTGGCAACTGTACCCCAAGGA...GAGAAGACTGCTCCGGGGTCTCCCAGAGAAGCCAGGGTCACCCAGGGAAGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| CDS-3UTR GCA 90 bp | CTGAACCAGGCCCACTGCCTGGCCTCTTGTTCTAGTGAGGCCATAGGCCCCAGGTCCTTGGGGTACAGTTaGCACATTAAAGGCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: LNQAHCLASCSSEAIGPRSLGYS*HIKGSS Trigger: CGAGCTGCCTTTAATGTGGCAACTGTACCCCAAGGA...CCTGGGGCCTATGGCCTCACTAGAACAAGAGGCCAGGCAGTGGGCCTGGTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| CDS-3UTR CCA 90 bp | GGTGACCCTGGCTTCTCTGGGAGACCCCGGAGCAGTCTTCTCTCCCTCATTTATGGAGGTGAGGAGAACTaGGATCTTCTCTGGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GDPGFSGRPRSSLLSLIYGGEEN*DLLWSP Trigger: GGGGCTCCAGAGAAGATCCCAGTTCTCCTCACCTCC...ATAAATGAGGGAGAGAAGACTGCTCCGGGGTCTCCCAGAGAAGCCAGGGTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101071.4 |
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| CDS-3UTR TCA 90 bp | CTTCTCTGGGAGACCCCGGAGCAGTCTTCTCTCCCTCATTTATTGGCATCTCGGAGGCACAGACACCACTaGGCACCTAGAGGAGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: LLWETPEQSSLPHLLASRRHRHH*APRGGE Trigger: CTCACCTCCTCTAGGTGCTCAGTGGTGTCTGTGCCT...CCGAGATGCCAATAAATGAGGGAGAGAAGACTGCTCCGGGGTCTCCCAGAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101071.4 |
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| CDS-3UTR GCA 90 bp | CAGACAGAACATAAGTACCAACATCTCCCCTGTGGGGCCAGGCCTGGGCAAGGCTCCTTGGGGTACAGTTaGCACATTAAAGGCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: QTEHKYQHLPCGARPGQGSLGYS*HIKGSS Trigger: CGAGCTGCCTTTAATGTGGCAACTGTACCCCAAGGA...GCCTTGCCCAGGCCTGGCCCCACAGGGGAGATGTTGGTACTTATGTTCTGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000041316.15 ENSMUST00000176579.2 ENSMUST00000177521.2 |
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| CDS-3UTR CCA 90 bp | GACCCCGGAGCAGTCTTCTCTCCCTCATTTATTGGCATCTCGGTCAAGGATGGAAGATCCACAGGCGGTTaGGGTGTGCAGGTGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DPGAVFSPSFIGISVKDGRSTGG*GVQVSL Trigger: CAGAGACACCTGCACACCCCAACCGCCTGTGGATCT...TCCATCCTTGACCGAGATGCCAATAAATGAGGGAGAGAAGACTGCTCCGGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| CDS-3UTR CCA 90 bp | AGGGACCAACCAAGGCAGCCGAGCAGGCAACAGCAGCATGGGAAGGGGCAGCGTTCTCTAAACTGTCCTTaGGGTACAGTTGCCACATTA | + |
|
Preference number: 4 (lower is better) Translates to: RDQPRQPSRQQQHGKGQRSLNCP*GTVATL Trigger: TAATGTGGCAACTGTACCCCAAGGACAGTTTAGAGA...ACGCTGCCCCTTCCCATGCTGCTGTTGCCTGCTCGGCTGCCTTGGTTGGTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176579.2 |
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| 3UTR CAA 72 bp | TGGGAGACCCCGGAGCAGTCTTCTCTCCCTCATTTATaGGCATCTCGGTCAAGGATGGAAGCCGATTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: WETPEQSSLPHL*ASRSRMEADLA Trigger: GGCCAAATCGGCTTCCATCCTTGACCGAGATGCCAATAAATGAGGGAGAGAAGACTGCTCCGGGGTCTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| CDS-3UTR CCA 90 bp | AAGGCAGCCGAGCAGGCAACAGCAGCATGGGAAGGGGCAGCGTCTGGCCAGAGTTGGCGCAAGATCACCTaGAATTTTTCATTACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KAAEQATAAWEGAASGQSWRKIT*NFSLLL Trigger: CAAGAGTAATGAAAAATTCCAGGTGATCTTGCGCCA...ACTCTGGCCAGACGCTGCCCCTTCCCATGCTGCTGTTGCCTGCTCGGCTGCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000176579.2 |
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| CDS-3UTR GCA 90 bp | GAACAGACAGAACATAAGTACCAACATCTCCCCTGTGGGGCCAGGCCTGGGCAATCATCCAAGTACACGTaGTTCTCCCAGATCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: EQTEHKYQHLPCGARPGQSSKYT*FSQIHR Trigger: CCTGTGGATCTGGGAGAAGCACGTGTACTTGGATGA...TTGCCCAGGCCTGGCCCCACAGGGGAGATGTTGGTACTTATGTTCTGTCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000041316.15 ENSMUST00000175652.2 ENSMUST00000176579.2 ENSMUST00000177521.2 |
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| CDS-3UTR CCA 90 bp | TGCCAGGGAGTCAGCAGAGCTGAGGGACCAACCAAGGCAGCCGAGCAGGCAACATGGCGCAAGATCACCTaGAATTTTTCATTACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CQGVSRAEGPTKAAEQATWRKIT*NFSLLL Trigger: CAAGAGTAATGAAAAATTCCAGGTGATCTTGCGCCA...TGTTGCCTGCTCGGCTGCCTTGGTTGGTCCCTCAGCTCTGCTGACTCCCTGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000176579.2 |
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| CDS-3UTR GCA 90 bp | CCTTTCAACATTCTTACTAGGAGACCAAGGCTTCCCTGGGTGACCCTGGCTTCTAAGGCAGACAGGAGCTaGAGGACCTTGATATGGTAC | + |
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Preference number: 4 (lower is better) Translates to: PFNILTRRPRLPWVTLASKADRS*RTLIWY Trigger: GTACCATATCAAGGTCCTGCAGCTCCTGTCTGCCTT...AGAAGCCAGGGTCACCCAGGGAAGCCTTGGTCTCCTAGTAAGAATGTTGAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101071.4 |
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| CDS-3UTR CCA 90 bp | GCGAACAGACAGAACATAAGTACCAACATCTCCCCTGTGGGGCCAGGCCTGGGCTGGCGCAAGATCACCTaGAATTTTTCATTACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ANRQNISTNISPVGPGLGWRKIT*NFSLLL Trigger: CAAGAGTAATGAAAAATTCCAGGTGATCTTGCGCCA...GCCCAGGCCTGGCCCCACAGGGGAGATGTTGGTACTTATGTTCTGTCTGTTCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000041316.15 ENSMUST00000176579.2 ENSMUST00000177521.2 |
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| CDS-3UTR GCA 90 bp | CGTCTGGCCAGAGTTTTCTTCTTGGAGCCCAGTGTAGAGGAAAAAGGACATGACTCCTTGGGGTACAGTTaGCACATTAAAGGCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: RLARVFFLEPSVEEKGHDSLGYS*HIKGSS Trigger: CGAGCTGCCTTTAATGTGGCAACTGTACCCCAAGGA...GTCATGTCCTTTTTCCTCTACACTGGGCTCCAAGAAGAAAACTCTGGCCAGACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000176579.2 |
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| CDS-3UTR CCA 90 bp | GACCCCGGAGCAGTCTTCTCTCCCTCATTTATTGGCATCTCGGTCAAGGATGGATGGCGCAAGATCACCTaGAATTTTTCATTACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DPGAVFSPSFIGISVKDGWRKIT*NFSLLL Trigger: CAAGAGTAATGAAAAATTCCAGGTGATCTTGCGCCA...TCCATCCTTGACCGAGATGCCAATAAATGAGGGAGAGAAGACTGCTCCGGGGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| CDS-3UTR GCA 90 bp | CGTATCTCTAAAATAGAACCACATAAAATCCCACACATTCCCTTTCAACATTCTTCATCCAAGTACACGTaGTTCTCCCAGATCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RISKIEPHKIPHIPFQHSSSKYT*FSQIHR Trigger: CCTGTGGATCTGGGAGAAGCACGTGTACTTGGATGA...AGAATGTTGAAAGGGAATGTGTGGGATTTTATGTGGTTCTATTTTAGAGATACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| CDS-3UTR CAA 90 bp | CAACCAAGGCAGCCGAGCAGGCAACAGCAGCATGGGAAGGGGCAGCGTCTGGCCCAGATCCACAGGCGGTaGGGGTGTGCAGGTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QPRQPSRQQQHGKGQRLAQIHRR*GCAGVS Trigger: AGAGACACCTGCACACCCCAACCGCCTGTGGATCTG...GGCCAGACGCTGCCCCTTCCCATGCTGCTGTTGCCTGCTCGGCTGCCTTGGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041316.15 ENSMUST00000175652.2 ENSMUST00000176579.2 |
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| CDS-3UTR CAA 90 bp | CGAGCAGGCAACAGCAGCATGGGAAGGGGCAGCGTCTGGCCAGAGTTTTCTTCTCAGATCCACAGGCGGTaGGGGTGTGCAGGTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RAGNSSMGRGSVWPEFSSQIHRR*GCAGVS Trigger: AGAGACACCTGCACACCCCAACCGCCTGTGGATCTG...AGAAGAAAACTCTGGCCAGACGCTGCCCCTTCCCATGCTGCTGTTGCCTGCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000041316.15 ENSMUST00000175652.2 ENSMUST00000176579.2 |
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| CDS TCA 90 bp | CTGTGGGGCCAGGCCTGGGCAAGGCAGACAGGAGCTGCAGGACCTTaGTATGGTACAGGATCTGCCAATACATGGAGTCGCAGCTTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LWGQAWARQTGAAGP*YGTGSANTWSRSFG Trigger: ACCGAAGCTGCGACTCCATGTATTGGCAGATCCTGTACCATATCAAGGTCCTGCAGCTCCTGTCTGCCTTGCCCAGGCCTGGCCCCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101071.4 |
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| CDS CCA 90 bp | GGGCCAGGCCTGGGCAAGGCAGACAGGAGCTGCAGGACCTTGATATaGTACAGGATCTGCCAATACATGGAGTCGCAGCTTCGGTACCTG | + |
|
Preference number: 5 (lower is better) Translates to: GPGLGKADRSCRTLI*YRICQYMESQLRYL Trigger: CAGGTACCGAAGCTGCGACTCCATGTATTGGCAGATCCTGTACCATATCAAGGTCCTGCAGCTCCTGTCTGCCTTGCCCAGGCCTGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101071.4 |
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| CDS-3UTR CAA 90 bp | AGCGAACAGACAGAACATAAGTACCAACATCTCCCCTGTGGGGCCAGGCCTGGGCAGATCCACAGGCGGTaGGGGTGTGCAGGTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SEQTEHKYQHLPCGARPGQIHRR*GCAGVS Trigger: AGAGACACCTGCACACCCCAACCGCCTGTGGATCTG...CCCAGGCCTGGCCCCACAGGGGAGATGTTGGTACTTATGTTCTGTCTGTTCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000041316.15 ENSMUST00000175652.2 ENSMUST00000176579.2 ENSMUST00000177521.2 |
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| CDS-3UTR CAA 90 bp | GGGAGACCCCGGAGCAGTCTTCTCTCCCTCATTTATTGGCATCTCGGTCAAGGACTTCTCTGGAGCCCCTaGCCAGGGAGTCAGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRPRSSLLSLIYWHLGQGLLWSP*PGSQQS Trigger: GCTCTGCTGACTCCCTGGCAAGGGGCTCCAGAGAAG...TCCTTGACCGAGATGCCAATAAATGAGGGAGAGAAGACTGCTCCGGGGTCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101071.4 |
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| CDS GCA 90 bp | ATGACTACGGGCAGCCAGCTTCGACGAAACTCATCCAAGTACACGTaGTTCTCCCAGATCCACAGGCGGTTGGGGTGTGCAGGTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: MTTGSQLRRNSSKYT*FSQIHRRLGCAGVS Trigger: AGAGACACCTGCACACCCCAACCGCCTGTGGATCTGGGAGAAGCACGTGTACTTGGATGAGTTTCGTCGAAGCTGGCTGCCCGTAGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 ENSMUST00000175652.2 ENSMUST00000176579.2 ENSMUST00000177521.2 |
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| CDS-3UTR CAA 90 bp | CCTTTCAACATTCTTACTAGGAGACCAAGGCTTCCCTGGGTGACCCTGGCTTCTCAGATCCACAGGCGGTaGGGGTGTGCAGGTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PFNILTRRPRLPWVTLASQIHRR*GCAGVS Trigger: AGAGACACCTGCACACCCCAACCGCCTGTGGATCTG...AGAAGCCAGGGTCACCCAGGGAAGCCTTGGTCTCCTAGTAAGAATGTTGAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| CDS-3UTR CAA 90 bp | GAACATAAGTACCAACATCTCCCCTGTGGGGCCAGGCCTGGGCAAGGCAGACAGAAAGCCGTGCTTGCCTaGATATGGTACAGGATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: EHKYQHLPCGARPGQGRQKAVLA*IWYRIC Trigger: GCAGATCCTGTACCATATCAAGGCAAGCACGGCTTT...CTGTCTGCCTTGCCCAGGCCTGGCCCCACAGGGGAGATGTTGGTACTTATGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177521.2 |
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| CDS-3UTR CAA 90 bp | GCAGTCTTCTCTCCCTCATTTATTGGCATCTCGGTCAAGGATGGAAGCCGATTTCAGATCCACAGGCGGTaGGGGTGTGCAGGTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AVFSPSFIGISVKDGSRFQIHRR*GCAGVS Trigger: AGAGACACCTGCACACCCCAACCGCCTGTGGATCTG...AAATCGGCTTCCATCCTTGACCGAGATGCCAATAAATGAGGGAGAGAAGACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 |
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| CDS GCA 72 bp | CACGTGCTTCTCCCAGATCCACAGGCGGTTGGGGTGTaGAGGTGTCTCTGCCCTGTGTGCCCGCTGGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: HVLLPDPQAVGV*RCLCPVCPLGS Trigger: GCTACCCAGCGGGCACACAGGGCAGAGACACCTGCACACCCCAACCGCCTGTGGATCTGGGAGAAGCACGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 ENSMUST00000175652.2 ENSMUST00000176579.2 ENSMUST00000177521.2 |
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| CDS CCA 72 bp | CCAAGTACACGTGCTTCTCCCAGATCCACAGGCGGTTaGGGTGTGCAGGTGTCTCTGCCCTGTGTGCCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: PSTRASPRSTGG*GVQVSLPCVPA Trigger: AGCGGGCACACAGGGCAGAGACACCTGCACACCCCAACCGCCTGTGGATCTGGGAGAAGCACGTGTACTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 ENSMUST00000175652.2 ENSMUST00000176579.2 ENSMUST00000177521.2 |
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| CDS CAA 72 bp | TCCAAGTACACGTGCTTCTCCCAGATCCACAGGCGGTaGGGGTGTGCAGGTGTCTCTGCCCTGTGTGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SKYTCFSQIHRR*GCAGVSALCAR Trigger: GCGGGCACACAGGGCAGAGACACCTGCACACCCCAACCGCCTGTGGATCTGGGAGAAGCACGTGTACTTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 ENSMUST00000175652.2 ENSMUST00000176579.2 ENSMUST00000177521.2 |
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| CDS CAA 90 bp | CGAAACTCATCCAAGTACACGTGCTTCTCCCAGATCCACAGGCGGTaGGGGTGTGCAGGTGTCTCTGCCCTGTGTGCCCGCTGGGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RNSSKYTCFSQIHRR*GCAGVSALCARWVA Trigger: GGCTACCCAGCGGGCACACAGGGCAGAGACACCTGCACACCCCAACCGCCTGTGGATCTGGGAGAAGCACGTGTACTTGGATGAGTTTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000041316.15 ENSMUST00000101071.4 ENSMUST00000175652.2 ENSMUST00000176579.2 ENSMUST00000177521.2 |
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| CDS CAA 90 bp | CCTGTGGGGCCAGGCCTGGGCAAGGCAGACAGGAGCTGCAGGACCTaGATATGGTACAGGATCTGCCAATACATGGAGTCGCAGCTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: PVGPGLGKADRSCRT*IWYRICQYMESQLR Trigger: CCGAAGCTGCGACTCCATGTATTGGCAGATCCTGTACCATATCAAGGTCCTGCAGCTCCTGTCTGCCTTGCCCAGGCCTGGCCCCACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101071.4 |
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| CDS GCA 72 bp | GGGAAAGCCGTGCTTGCCTTGATATGGTACAGGATCTaGCAATACATGGAGTCGCAGCTTCGGTACCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GKAVLALIWYRI*QYMESQLRYLS Trigger: GGACAGGTACCGAAGCTGCGACTCCATGTATTGGCAGATCCTGTACCATATCAAGGCAAGCACGGCTTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177521.2 |
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| CDS CCA 72 bp | CTGGGCAAGGCAGACAGGAGCTGCAGGACCTTGATATaGTACAGGATCTGCCAATACATGGAGTCGCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LGKADRSCRTLI*YRICQYMESQL Trigger: AAGCTGCGACTCCATGTATTGGCAGATCCTGTACCATATCAAGGTCCTGCAGCTCCTGTCTGCCTTGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101071.4 |
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