Pregenerated sensors for TCHP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002486Ensembl transcript IDs: ENSMUST00000094441.11, ENSMUST00000131679.5
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGATTCCGAGTCTCATGCCATTTCTCCAGGGTCACATGTCTCTCTaGGCACTTAATTCCCATGGGGCTGCACACTGGGCTTCCACAGAC | + |
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Preference number: 1 (lower is better) Translates to: VIPSLMPFLQGHMSL*ALNSHGAAHWASTD Trigger: GTCTGTGGAAGCCCAGTGTGCAGCCCCATGGGAATTAAGTGCCCAGAGAGACATGTGACCCTGGAGAAATGGCATGAGACTCGGAATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR GCA 90 bp | AGTGACCTTGAGGACTCTTTCGGGGTGGCACATGTTGGGCTCAAGTaGTCTGTAGGATTCTTTTCTTCTTGGTGGTGTGGAGCTGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: SDLEDSFGVAHVGLK*SVGFFSSWWCGAGQ Trigger: CTGCCCAGCTCCACACCACCAAGAAGAAAAGAATCCTACAGAGCACTTGAGCCCAACATGTGCCACCCCGAAAGAGTCCTCAAGGTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR CCA 90 bp | TGTTGGGCTCAAGTGCTCTGTAGGATTCTTTTCTTCTTGGTGGTGTaGAGCTGGGCAGAGGACCACACAAGTGGAAGGTTAAGTACTCCA | + |
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Preference number: 1 (lower is better) Translates to: CWAQVLCRILFFLVV*SWAEDHTSGRLSTP Trigger: TGGAGTACTTAACCTTCCACTTGTGTGGTCCTCTGCCCAGCTCCACACCACCAAGAAGAAAAGAATCCTACAGAGCACTTGAGCCCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR TCA 90 bp | GAACCTACGTATTCCTGTCATGGTACTCCTGTCTGTCAGGGAACATaGCTTCTTCTTAGACTAACTCTAACATGTACTTATAAAGCATTC | + |
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Preference number: 1 (lower is better) Translates to: EPTYSCHGTPVCQGT*LLLRLTLTCTYKAF Trigger: GAATGCTTTATAAGTACATGTTAGAGTTAGTCTAAGAAGAAGTCATGTTCCCTGACAGACAGGAGTACCATGACAGGAATACGTAGGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR-3UTR TCA 90 bp | AGCCCTCAGAGCCCAGGCAAACTCTCGGTTCCCATAACCAGGAACAACACCGTACAAGGCCTGTCGGGGTaGGAAGGGCTCTCAGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: SPQSPGKLSVPITRNNTVQGLSG*EGLSGD Trigger: GTCCCCTGAGAGCCCTTCTCACCCCGACAGGCCTTG...TACGGTGTTGTTCCTGGTTATGGGAACCGAGAGTTTGCCTGGGCTCTGAGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR-3UTR CCA 90 bp | TGCACACTGGGCTTCCACAGACACAGGAGGTCCCTAGTCAAGCCTCTGCCTTTGCAGCACCCTGAGCACTaGCCAGCACCAACACCGTAC | + |
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Preference number: 2 (lower is better) Translates to: CTLGFHRHRRSLVKPLPLQHPEH*PAPTPY Trigger: GTACGGTGTTGGTGCTGGCCAGTGCTCAGGGTGCTG...CAAAGGCAGAGGCTTGACTAGGGACCTCCTGTGTCTGTGGAAGCCCAGTGTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR CAA 90 bp | CTGGGCTTCCACAGACACAGGAGGTCCCTAGTCAAGCCTCTGCCTTaGTCGGCTAGCCAACCAAGTGACCTTGAGGACTCTTTCGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: LGFHRHRRSLVKPLP*SASQPSDLEDSFGV Trigger: CACCCCGAAAGAGTCCTCAAGGTCACTTGGTTGGCTAGCCGACAAAGGCAGAGGCTTGACTAGGGACCTCCTGTGTCTGTGGAAGCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR-3UTR CCA 90 bp | TGCACACTGGGCTTCCACAGACACAGGAGGTCCCTAGTCAAGCCTCTGCCTTTGCGGGGTGGCACATGTTaGGCTCAAGTGCTCTGTAGG | + |
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Preference number: 2 (lower is better) Translates to: CTLGFHRHRRSLVKPLPLRGGTC*AQVLCR Trigger: CCTACAGAGCACTTGAGCCCAACATGTGCCACCCCG...CAAAGGCAGAGGCTTGACTAGGGACCTCCTGTGTCTGTGGAAGCCCAGTGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR-3UTR CCA 90 bp | ACACTGGGCTTCCACAGACACAGGAGGTCCCTAGTCAAGCCTCTGCCTTTGTCGTCCACAGTACACACATaGGCCTTGGGGCTACACAGC | + |
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Preference number: 2 (lower is better) Translates to: TLGFHRHRRSLVKPLPLSSTVHT*ALGLHS Trigger: GCTGTGTAGCCCCAAGGCCCATGTGTGTACTGTGGA...CGACAAAGGCAGAGGCTTGACTAGGGACCTCCTGTGTCTGTGGAAGCCCAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR-3UTR CCA 90 bp | GGGGGCCACATCCAAGGACCTCAGCAGGAAATGAAACAGGCTGAGAACCGGTTCTTCTTCTTGGTGGTGTaGAGCTGGGCAGAGGACCAC | + |
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Preference number: 2 (lower is better) Translates to: GGHIQGPQQEMKQAENRFFFLVV*SWAEDH Trigger: GTGGTCCTCTGCCCAGCTCCACACCACCAAGAAGAA...GAACCGGTTCTCAGCCTGTTTCATTTCCTGCTGAGGTCCTTGGATGTGGCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR-3UTR CCA 90 bp | TGGAAACAGAGCTGGGGGCCACATCCAAGGACCTCAGCAGGAAATGAAACAGGCTTGGTGGTGTGGAGCTaGGCAGAGGACCACACAAGT | + |
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Preference number: 2 (lower is better) Translates to: WKQSWGPHPRTSAGNETGLVVWS*AEDHTS Trigger: ACTTGTGTGGTCCTCTGCCCAGCTCCACACCACCAA...GCCTGTTTCATTTCCTGCTGAGGTCCTTGGATGTGGCCCCCAGCTCTGTTTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR-3UTR TCA 90 bp | GGGGGCCACATCCAAGGACCTCAGCAGGAAATGAAACAGGCTGAGAACCGGTTCCAGCTACAGGTGAGATaGGAGGAACCTACGTATTCC | + |
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Preference number: 2 (lower is better) Translates to: GGHIQGPQQEMKQAENRFQLQVR*EEPTYS Trigger: GGAATACGTAGGTTCCTCTCATCTCACCTGTAGCTG...GAACCGGTTCTCAGCCTGTTTCATTTCCTGCTGAGGTCCTTGGATGTGGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR-3UTR CCA 90 bp | GTGGTGTGGAGCTGGGCAGAGGACCACACAAGTGGAAGGTTAAGTACTCCACGCTACACACATGGGCCTTaGGGCTACACAGCTCATAAC | + |
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Preference number: 2 (lower is better) Translates to: VVWSWAEDHTSGRLSTPRYTHGP*GYTAHN Trigger: GTTATGAGCTGTGTAGCCCCAAGGCCCATGTGTGTA...GCGTGGAGTACTTAACCTTCCACTTGTGTGGTCCTCTGCCCAGCTCCACACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR-3UTR CCA 90 bp | TGCACACTGGGCTTCCACAGACACAGGAGGTCCCTAGTCAAGCCTCTGCCTTTGTTCTTTTCTTCTTGGTaGTGTGGAGCTGGGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: CTLGFHRHRRSLVKPLPLFFSSW*CGAGQR Trigger: CCTCTGCCCAGCTCCACACCACCAAGAAGAAAAGAA...CAAAGGCAGAGGCTTGACTAGGGACCTCCTGTGTCTGTGGAAGCCCAGTGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR-3UTR CCA 90 bp | AGCCCTCAGAGCCCAGGCAAACTCTCGGTTCCCATAACCAGGAACAACACCGTACGCCATGAGGACCCATaGCCACTTGTATTGGGATCT | + |
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Preference number: 2 (lower is better) Translates to: SPQSPGKLSVPITRNNTVRHEDP*PLVLGS Trigger: AGATCCCAATACAAGTGGCCATGGGTCCTCATGGCG...TACGGTGTTGTTCCTGGTTATGGGAACCGAGAGTTTGCCTGGGCTCTGAGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR-3UTR TCA 90 bp | CGGCTAGCCAACCAAGTGACCTTGAGGACTCTTTCGGGGTGGCACATGTTGGGCCTTATAAAGCATTCCTaGTCTCTGGTGGCACTGAAG | + |
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Preference number: 2 (lower is better) Translates to: RLANQVTLRTLSGWHMLGLIKHS*SLVALK Trigger: CTTCAGTGCCACCAGAGATCAGGAATGCTTTATAAG...GCCCAACATGTGCCACCCCGAAAGAGTCCTCAAGGTCACTTGGTTGGCTAGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR-3UTR CCA 90 bp | CGGAAAGATACAAGCCATAACAACCCGACTGTCGCCATGAGGACCCATGGCCACGGTCACATGTCTCTCTaGGCACTTAATTCCCATGGG | + |
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Preference number: 2 (lower is better) Translates to: RKDTSHNNPTVAMRTHGHGHMSL*ALNSHG Trigger: CCCATGGGAATTAAGTGCCCAGAGAGACATGTGACC...GTGGCCATGGGTCCTCATGGCGACAGTCGGGTTGTTATGGCTTGTATCTTTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR CAA 90 bp | GGTGGCACATGTTGGGCTCAAGTGCTCTGTAGGATTCTTTTCTTCTaGGTGGTGTGGAGCTGGGCAGAGGACCACACAAGTGGAAGGTTA | + |
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Preference number: 2 (lower is better) Translates to: GGTCWAQVLCRILFF*VVWSWAEDHTSGRL Trigger: TAACCTTCCACTTGTGTGGTCCTCTGCCCAGCTCCACACCACCAAGAAGAAAAGAATCCTACAGAGCACTTGAGCCCAACATGTGCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR-3UTR TCA 90 bp | CGGCTAGCCAACCAAGTGACCTTGAGGACTCTTTCGGGGTGGCACATGTTGGGCGTCTGTCAGGGAACATaGCTTCTTCTTAGACTAACT | + |
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Preference number: 2 (lower is better) Translates to: RLANQVTLRTLSGWHMLGVCQGT*LLLRLT Trigger: AGTTAGTCTAAGAAGAAGTCATGTTCCCTGACAGAC...GCCCAACATGTGCCACCCCGAAAGAGTCCTCAAGGTCACTTGGTTGGCTAGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR-3UTR CCA 90 bp | CCAACTCGAGGAAGGCTACGGAAAGATACAAGCCATAACAACCCGACTGTCGCCGGATTCTTTTCTTCTTaGTGGTGTGGAGCTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: PTRGRLRKDTSHNNPTVAGFFSS*WCGAGQ Trigger: CTGCCCAGCTCCACACCACCAAGAAGAAAAGAATCC...GGCGACAGTCGGGTTGTTATGGCTTGTATCTTTCCGTAGCCTTCCTCGAGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR-3UTR CCA 90 bp | CGTATTCCTGTCATGGTACTCCTGTCTGTCAGGGAACATGACTTCTTCTTAGACGACGCTGCACACCCATaGCATCCTGACATCTATGGC | + |
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Preference number: 2 (lower is better) Translates to: RIPVMVLLSVREHDFFLDDAAHP*HPDIYG Trigger: GCCATAGATGTCAGGATGCCATGGGTGTGCAGCGTC...GTCTAAGAAGAAGTCATGTTCCCTGACAGACAGGAGTACCATGACAGGAATACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR-3UTR GCA 90 bp | CCAACTCGAGGAAGGCTACGGAAAGATACAAGCCATAACAACCCGACTGTCGCCCATGTTGGGCTCAAGTaGTCTGTAGGATTCTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: PTRGRLRKDTSHNNPTVAHVGLK*SVGFFS Trigger: AGAAAAGAATCCTACAGAGCACTTGAGCCCAACATG...GGCGACAGTCGGGTTGTTATGGCTTGTATCTTTCCGTAGCCTTCCTCGAGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR GCA 72 bp | CCAAACAAGGGCGCCTTTGTCACCGGCTCTCCAGACTaGCAGCTCTTCCACAGTACACACATGGGCCTTGGG | + |
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Preference number: 3 (lower is better) Translates to: PNKGAFVTGSPD*QLFHSTHMGLG Trigger: CCCAAGGCCCATGTGTGTACTGTGGAAGAGCTGGCAGTCTGGAGAGCCGGTGACAAAGGCGCCCTTGTTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR CCA 72 bp | CTTGGTGGTGTGGAGCTGGGCAGAGGACCACACAAGTaGAAGGTTAAGTACTCCACGCTGAGAACCCCCAAC | + |
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Preference number: 3 (lower is better) Translates to: LGGVELGRGPHK*KVKYSTLRTPN Trigger: GTTGGGGGTTCTCAGCGTGGAGTACTTAACCTTCCACTTGTGTGGTCCTCTGCCCAGCTCCACACCACCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR TCA 72 bp | AACAGGCTGAGAACCGGTTCCGTGATGGAAGGGAAGTaGTACAGCCCTCAGAGCCCAGGCAAACTCTCGGTT | + |
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Preference number: 3 (lower is better) Translates to: NRLRTGSVMEGK*YSPQSPGKLSV Trigger: AACCGAGAGTTTGCCTGGGCTCTGAGGGCTGTATCACTTCCCTTCCATCACGGAACCGGTTCTCAGCCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR-3UTR CAA 90 bp | GCGAGTGCTCACAAATGTGTAGTGGAAACAGAGCTGGGGGCCACATCCAAGGACAGGACCCATGGCCACTaGTATTGGGATCTAACAGTG | + |
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Preference number: 3 (lower is better) Translates to: ASAHKCVVETELGATSKDRTHGH*YWDLTV Trigger: CACTGTTAGATCCCAATACAAGTGGCCATGGGTCCT...GTCCTTGGATGTGGCCCCCAGCTCTGTTTCCACTACACATTTGTGAGCACTCGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR CCA 72 bp | GTTGGGCTCAAGTGCTCTGTAGGATTCTTTTCTTCTTaGTGGTGTGGAGCTGGGCAGAGGACCACACAAGTG | + |
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Preference number: 3 (lower is better) Translates to: VGLKCSVGFFSS*WCGAGQRTTQV Trigger: CACTTGTGTGGTCCTCTGCCCAGCTCCACACCACCAAGAAGAAAAGAATCCTACAGAGCACTTGAGCCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR CCA 72 bp | CTCTGTAGGATTCTTTTCTTCTTGGTGGTGTGGAGCTaGGCAGAGGACCACACAAGTGGAAGGTTAAGTACT | + |
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Preference number: 3 (lower is better) Translates to: LCRILFFLVVWS*AEDHTSGRLST Trigger: AGTACTTAACCTTCCACTTGTGTGGTCCTCTGCCCAGCTCCACACCACCAAGAAGAAAAGAATCCTACAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR TCA 90 bp | AAGGCCTGTCGGGGTGAGAAGGGCTCTCAGGGGACGCTGCACACCCATGGCATCCCAGGAGAAGCTCTCTaGGCCTCTCCCGCCGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: KACRGEKGSQGTLHTHGIPGEAL*ASPAGA Trigger: AGCTCCGGCGGGAGAGGCTCAGAGAGCTTCTCCTGG...GATGCCATGGGTGTGCAGCGTCCCCTGAGAGCCCTTCTCACCCCGACAGGCCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR GCA 90 bp | AAGGCCTGTCGGGGTGAGAAGGGCTCTCAGGGGACGCTGCACACCCATGGCATCGAGTGCTCTTCCGCCTaGCTGGCCTCCTCCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: KACRGEKGSQGTLHTHGIECSSA*LASSSS Trigger: GGAAGAGGAGGAGGCCAGGCAGGCGGAAGAGCACTC...GATGCCATGGGTGTGCAGCGTCCCCTGAGAGCCCTTCTCACCCCGACAGGCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR GCA 90 bp | CGGCTAGCCAACCAAGTGACCTTGAGGACTCTTTCGGGGTGGCACATGTTGGGCCGGAGGGCGGCCATCTaGCTCCTTTCCTCCTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: RLANQVTLRTLSGWHMLGRRAAI*LLSSSS Trigger: GCTGGAGGAGGAAAGGAGGCAGATGGCCGCCCTCCG...GCCCAACATGTGCCACCCCGAAAGAGTCCTCAAGGTCACTTGGTTGGCTAGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR GCA 90 bp | AAGGCCTGTCGGGGTGAGAAGGGCTCTCAGGGGACGCTGCACACCCATGGCATCGCCAGTTCCACCTGCTaGAACTCGCCTTCCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: KACRGEKGSQGTLHTHGIASSTC*NSPSFS Trigger: GGAGAAGGAAGGCGAGTTGCAGCAGGTGGAACTGGC...GATGCCATGGGTGTGCAGCGTCCCCTGAGAGCCCTTCTCACCCCGACAGGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR GCA 90 bp | AAGGCCTGTCGGGGTGAGAAGGGCTCTCAGGGGACGCTGCACACCCATGGCATCTGCTCCTCGATGACCTaGTTCATCCAGGCCGCATCG | + |
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Preference number: 4 (lower is better) Translates to: KACRGEKGSQGTLHTHGICSSMT*FIQAAS Trigger: CGATGCGGCCTGGATGAAGCAGGTCATCGAGGAGCA...GATGCCATGGGTGTGCAGCGTCCCCTGAGAGCCCTTCTCACCCCGACAGGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR GCA 90 bp | CGGCTAGCCAACCAAGTGACCTTGAGGACTCTTTCGGGGTGGCACATGTTGGGCCTCCTCCTGCCGGGCTaGTTCCCATTCCTGGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: RLANQVTLRTLSGWHMLGLLLPG*FPFLAL Trigger: CAGGGCCAGGAATGGGAAGCAGCCCGGCAGGAGGAG...GCCCAACATGTGCCACCCCGAAAGAGTCCTCAAGGTCACTTGGTTGGCTAGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR GCA 90 bp | CGGCTAGCCAACCAAGTGACCTTGAGGACTCTTTCGGGGTGGCACATGTTGGGCTTCCCGGCGGGCTGCTaGGTACTGGTTCTCCAACCG | + |
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Preference number: 4 (lower is better) Translates to: RLANQVTLRTLSGWHMLGFPAGC*VLVLQP Trigger: CGGTTGGAGAACCAGTACGCAGCAGCCCGCCGGGAA...GCCCAACATGTGCCACCCCGAAAGAGTCCTCAAGGTCACTTGGTTGGCTAGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR GCA 90 bp | GTGGTGTGGAGCTGGGCAGAGGACCACACAAGTGGAAGGTTAAGTACTCCACGCCTGGCCCTGGCGCTCTaGAACCTGGGCTTCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: VVWSWAEDHTSGRLSTPRLALAL*NLGFQL Trigger: GAGCTGGAAGCCCAGGTTGCAGAGCGCCAGGGCCAG...GCGTGGAGTACTTAACCTTCCACTTGTGTGGTCCTCTGCCCAGCTCCACACCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR CCA 90 bp | ACACTGGGCTTCCACAGACACAGGAGGTCCCTAGTCAAGCCTCTGCCTTTGTCGGGGCTTGCTCCCGCCTaGCCAGTTCCACCTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: TLGFHRHRRSLVKPLPLSGLAPA*PVPPAA Trigger: TGCAGCAGGTGGAACTGGCCAGGCGGGAGCAAGCCC...CGACAAAGGCAGAGGCTTGACTAGGGACCTCCTGTGTCTGTGGAAGCCCAGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR CCA 90 bp | CTGGTCCTCCCTGAGCTGACAGCTACAGGTGAGATGAGAGGAACCTACGTATTCAGCTCCTCCATCTGCTaGCGCAGCGCCTCGGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LVLPELTATGEMRGTYVFSSSIC*RSASAC Trigger: GCAGGCCGAGGCGCTGCGCCAGCAGATGGAGGAGCT...GAATACGTAGGTTCCTCTCATCTCACCTGTAGCTGTCAGCTCAGGGAGGACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR CCA 90 bp | AGCCCTCAGAGCCCAGGCAAACTCTCGGTTCCCATAACCAGGAACAACACCGTATCCTCCTGGATCTCCTaGGTGCGCCTGTTGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SPQSPGKLSVPITRNNTVSSWIS*VRLLSC Trigger: GCAGCTCAACAGGCGCACCCAGGAGATCCAGGAGGA...TACGGTGTTGTTCCTGGTTATGGGAACCGAGAGTTTGCCTGGGCTCTGAGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR TCA 90 bp | TTGGTGGTGTGGAGCTGGGCAGAGGACCACACAAGTGGAAGGTTAAGTACTCCAGCAGTTGCTCCTCGATaGCCTGCTTCATCCAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: LVVWSWAEDHTSGRLSTPAVAPR*PASSRP Trigger: CGGCCTGGATGAAGCAGGTCATCGAGGAGCAACTGC...TGGAGTACTTAACCTTCCACTTGTGTGGTCCTCTGCCCAGCTCCACACCACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR GCA 90 bp | CTGGTCCTCCCTGAGCTGACAGCTACAGGTGAGATGAGAGGAACCTACGTATTCGACTTCAGGTCCTGGTaGTGCTCGCGGAGCCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: LVLPELTATGEMRGTYVFDFRSW*CSRSLC Trigger: GCAAAGGCTCCGCGAGCAGCACCAGGACCTGAAGTC...GAATACGTAGGTTCCTCTCATCTCACCTGTAGCTGTCAGCTCAGGGAGGACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR GCA 90 bp | AGTGAGCATTTGACGAGGGCGAGTGCTCACAAATGTGTAGTGGAAACAGAGCTGTTCAGCTCCTCCATCTaGTGGCGCAGCGCCTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: SEHLTRASAHKCVVETELFSSSI*WRSASA Trigger: GGCCGAGGCGCTGCGCCAGCAGATGGAGGAGCTGAA...CAGCTCTGTTTCCACTACACATTTGTGAGCACTCGCCCTCGTCAAATGCTCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR CCA 90 bp | TTGGTGGTGTGGAGCTGGGCAGAGGACCACACAAGTGGAAGGTTAAGTACTCCATGGCGCTCTGCAACCTaGGCTTCCAGCTCCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LVVWSWAEDHTSGRLSTPWRSAT*ASSSCF Trigger: GAAGCAGGAGCTGGAAGCCCAGGTTGCAGAGCGCCA...TGGAGTACTTAACCTTCCACTTGTGTGGTCCTCTGCCCAGCTCCACACCACCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR CCA 90 bp | TTGACGAGGGCGAGTGCTCACAAATGTGTAGTGGAAACAGAGCTGGGGGCCACAAGCCCTTCTCTGCCATaGTCTTCGCCTCCTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LTRASAHKCVVETELGATSPSLP*SSPPAA Trigger: TGCAGCAGGAGGCGAAGACCATGGCAGAGAAGGGCT...TGTGGCCCCCAGCTCTGTTTCCACTACACATTTGTGAGCACTCGCCCTCGTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR GCA 90 bp | AGTGAGCATTTGACGAGGGCGAGTGCTCACAAATGTGTAGTGGAAACAGAGCTGAGGCGCCCCTCTAGCTaGCTCCTCTCCTCCTCGACT | + |
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Preference number: 4 (lower is better) Translates to: SEHLTRASAHKCVVETELRRPSS*LLSSST Trigger: AGTCGAGGAGGAGAGGAGGCAGCTAGAGGGGCGCCT...CAGCTCTGTTTCCACTACACATTTGTGAGCACTCGCCCTCGTCAAATGCTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR GCA 90 bp | TGGAAACAGAGCTGGGGGCCACATCCAAGGACCTCAGCAGGAAATGAAACAGGCATCTTCTCCAGGATCTaGTGCTGCCTCCCGGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: WKQSWGPHPRTSAGNETGIFSRI*CCLPVR Trigger: TCTGACCGGGAGGCAGCAGCAGATCCTGGAGAAGAT...GCCTGTTTCATTTCCTGCTGAGGTCCTTGGATGTGGCCCCCAGCTCTGTTTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR CCA 90 bp | GTTGGGCTCAAGTGCTCTGTAGGATTCTTTTCTTCTTGGTGGTGTGGAGCTGGGGCTGACTTCAGGTCCTaGTGCTGCTCGCGGAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VGLKCSVGFFSSWWCGAGADFRS*CCSRSL Trigger: AAGGCTCCGCGAGCAGCACCAGGACCTGAAGTCAGC...CCCAGCTCCACACCACCAAGAAGAAAAGAATCCTACAGAGCACTTGAGCCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| 3UTR CAA 72 bp | CACAGACACAGGAGGTCCCTAGTCAAGCCTCTGCCTTaGTCGGCTAGCCAACCAAGTGACCTTGAGGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: HRHRRSLVKPLP*SASQPSDLEDS Trigger: AGAGTCCTCAAGGTCACTTGGTTGGCTAGCCGACAAAGGCAGAGGCTTGACTAGGGACCTCCTGTGTCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR TCA 90 bp | AGTGAGCATTTGACGAGGGCGAGTGCTCACAAATGTGTAGTGGAAACAGAGCTGAACTGGTCCTCCTGCTaGTGCTGGCGCTGGCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SEHLTRASAHKCVVETELNWSSC*CWRWRR Trigger: TCTTCGCCAGCGCCAGCATCAGCAGGAGGACCAGTT...CAGCTCTGTTTCCACTACACATTTGTGAGCACTCGCCCTCGTCAAATGCTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR GCA 90 bp | GTTGGGCTCAAGTGCTCTGTAGGATTCTTTTCTTCTTGGTGGTGTGGAGCTGGGTTCTCCAGGATCTGCTaGTGCCTCCCGGTCAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: VGLKCSVGFFSSWWCGAGFSRIC*CLPVRT Trigger: GGTTCTGACCGGGAGGCAGCAGCAGATCCTGGAGAA...CCCAGCTCCACACCACCAAGAAGAAAAGAATCCTACAGAGCACTTGAGCCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR CCA 90 bp | CGGCTAGCCAACCAAGTGACCTTGAGGACTCTTTCGGGGTGGCACATGTTGGGCGCTGGTAGGAGATCTTaGAGCTCCATTCGATCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RLANQVTLRTLSGWHMLGAGRRS*SSIRSV Trigger: AACAGATCGAATGGAGCTCCAAGATCTCCTACCAGC...GCCCAACATGTGCCACCCCGAAAGAGTCCTCAAGGTCACTTGGTTGGCTAGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR TCA 90 bp | TGCACACTGGGCTTCCACAGACACAGGAGGTCCCTAGTCAAGCCTCTGCCTTTGATCACGTGCTTCTTGTaGAGGTCCAACTCAAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CTLGFHRHRRSLVKPLPLITCFL*RSNSSS Trigger: AGAGCTTGAGTTGGACCTTCACAAGAAGCACGTGAT...CAAAGGCAGAGGCTTGACTAGGGACCTCCTGTGTCTGTGGAAGCCCAGTGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR GCA 90 bp | CTGGTCCTCCCTGAGCTGACAGCTACAGGTGAGATGAGAGGAACCTACGTATTCAACCGCTTGTTCTCCTaGTTCTCTGTGGCTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVLPELTATGEMRGTYVFNRLFS*FSVASC Trigger: GCAAGAAGCCACAGAGAAGCAGGAGAACAAGCGGTT...GAATACGTAGGTTCCTCTCATCTCACCTGTAGCTGTCAGCTCAGGGAGGACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR GCA 90 bp | CAAGTGCTCTGTAGGATTCTTTTCTTCTTGGTGGTGTGGAGCTGGGCAGAGGACATGGTCTTCGCCTCCTaGTGCAGCAAAGCATTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QVLCRILFFLVVWSWAEDMVFAS*CSKALE Trigger: CTCCAATGCTTTGCTGCAGCAGGAGGCGAAGACCAT...GTCCTCTGCCCAGCTCCACACCACCAAGAAGAAAAGAATCCTACAGAGCACTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR CCA 90 bp | TGCACACTGGGCTTCCACAGACACAGGAGGTCCCTAGTCAAGCCTCTGCCTTTGCAAGCTCTCGAAGTTTaGGGTTGTTCTTCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CTLGFHRHRRSLVKPLPLQALEV*GCSSSS Trigger: ACTGGAAGAAGAACAACCCCAAACTTCGAGAGCTTG...CAAAGGCAGAGGCTTGACTAGGGACCTCCTGTGTCTGTGGAAGCCCAGTGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR GCA 90 bp | CGTATTCCTGTCATGGTACTCCTGTCTGTCAGGGAACATGACTTCTTCTTAGACCAGCTCTGCCTCCCGTaGTTTCTCCAGCTGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RIPVMVLLSVREHDFFLDQLCLP*FLQLQL Trigger: CAACTGCAGCTGGAGAAAGCACGGGAGGCAGAGCTG...GTCTAAGAAGAAGTCATGTTCCCTGACAGACAGGAGTACCATGACAGGAATACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR GCA 90 bp | CTGGTCCTCCCTGAGCTGACAGCTACAGGTGAGATGAGAGGAACCTACGTATTCCTTCTTCAGTTTGGTTaGCTCCATCTCCTTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVLPELTATGEMRGTYVFLLQFG*LHLLLL Trigger: AAGCAGAAGGAGATGGAGGCAACCAAACTGAAGAAG...GAATACGTAGGTTCCTCTCATCTCACCTGTAGCTGTCAGCTCAGGGAGGACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR GCA 90 bp | CTTCTTCTTAGACTAACTCTAACATGTACTTATAAAGCATTCCTGATCTCTGGTGCCCCAGCTCTGTCTTaGGCCGGAGGGCGGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLRLTLTCTYKAFLISGAPALS*AGGRPS Trigger: AGATGGCCGCCCTCCGGCGCAAGACAGAGCTGGGGC...ACCAGAGATCAGGAATGCTTTATAAGTACATGTTAGAGTTAGTCTAAGAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR CCA 90 bp | CAAGTGCTCTGTAGGATTCTTTTCTTCTTGGTGGTGTGGAGCTGGGCAGAGGACGTTCCTTCTTCAGTTTaGTTGCCTCCATCTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVLCRILFFLVVWSWAEDVPSSV*LPPSPS Trigger: AGAAGGAGATGGAGGCAACCAAACTGAAGAAGGAAC...GTCCTCTGCCCAGCTCCACACCACCAAGAAGAAAAGAATCCTACAGAGCACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR GCA 90 bp | AGAGGAACCTACGTATTCCTGTCATGGTACTCCTGTCTGTCAGGGAACATGACTTTCTTCTTTCTGTGTTaGCCAAGAATTTATCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGTYVFLSWYSCLSGNMTFFFLC*PRIYHV Trigger: CACGTGATAAATTCTTGGGCAACACAGAAAGAAGAA...AGTCATGTTCCCTGACAGACAGGAGTACCATGACAGGAATACGTAGGTTCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR GCA 90 bp | CTTCTTCTTAGACTAACTCTAACATGTACTTATAAAGCATTCCTGATCTCTGGTGTCTTCGCCTCCTGCTaGAGCAAAGCATTGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLRLTLTCTYKAFLISGVFASC*SKALEC Trigger: GCACTCCAATGCTTTGCTGCAGCAGGAGGCGAAGAC...ACCAGAGATCAGGAATGCTTTATAAGTACATGTTAGAGTTAGTCTAAGAAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS GCA 90 bp | GCCGCATCGGCCCGGGCTTGCTCCCGCCTGGCCAGTTCCACCTGCTaGAACTCGCCTTCCTTCTCCAGGAGGGCCTGCAGGATCCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AASARACSRLASSTC*NSPSFSRRACRIRP Trigger: TGGGCGGATCCTGCAGGCCCTCCTGGAGAAGGAAGGCGAGTTGCAGCAGGTGGAACTGGCCAGGCGGGAGCAAGCCCGGGCCGATGCGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094441.11 ENSMUST00000131679.5 |
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| CDS GCA 90 bp | CAGGCCGCATCGGCCCGGGCTTGCTCCCGCCTGGCCAGTTCCACCTaGTGCAACTCGCCTTCCTTCTCCAGGAGGGCCTGCAGGATCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QAASARACSRLASST*CNSPSFSRRACRIR Trigger: GCGGATCCTGCAGGCCCTCCTGGAGAAGGAAGGCGAGTTGCAGCAGGTGGAACTGGCCAGGCGGGAGCAAGCCCGGGCCGATGCGGCCTG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094441.11 ENSMUST00000131679.5 |
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| CDS GCA 90 bp | TGCTCCTCGATGACCTGCTTCATCCAGGCCGCATCGGCCCGGGCTTaGTCCCGCCTGGCCAGTTCCACCTGCTGCAACTCGCCTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CSSMTCFIQAASARA*SRLASSTCCNSPSF Trigger: GAAGGAAGGCGAGTTGCAGCAGGTGGAACTGGCCAGGCGGGAGCAAGCCCGGGCCGATGCGGCCTGGATGAAGCAGGTCATCGAGGAGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094441.11 ENSMUST00000131679.5 |
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| CDS GCA 90 bp | TCTTCTCGGGCTGACTTCAGGTCCTGGTGCTGCTCGCGGAGCCTTTaGTCCCGCAGGCCCATGCTCAGCCTGAGCTCATCCAGCTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSRADFRSWCCSRSL*SRRPMLSLSSSSSA Trigger: TGCGGAGCTGGATGAGCTCAGGCTGAGCATGGGCCTGCGGGAGCAAAGGCTCCGCGAGCAGCACCAGGACCTGAAGTCAGCCCGAGAAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS GCA 90 bp | GCCAGTTCCACCTGCTGCAACTCGCCTTCCTTCTCCAGGAGGGCCTaGAGGATCCGCCCATCTACCTCCAGCTCCTCCTGGATCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASSTCCNSPSFSRRA*RIRPSTSSSSWISW Trigger: CCAGGAGATCCAGGAGGAGCTGGAGGTAGATGGGCGGATCCTGCAGGCCCTCCTGGAGAAGGAAGGCGAGTTGCAGCAGGTGGAACTGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094441.11 ENSMUST00000131679.5 |
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| CDS CCA 90 bp | TCGCCTCCTGCTGCAGCAAAGCATTGGAGTGCTCTTCCGCCTGCCTaGCCTCCTCCTCTTCCTCCTCCTCCTGCCGGGCTGCTTCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: SPPAAAKHWSALPPA*PPPLPPPPAGLLPI Trigger: AATGGGAAGCAGCCCGGCAGGAGGAGGAGGAAGAGGAGGAGGCCAGGCAGGCGGAAGAGCACTCCAATGCTTTGCTGCAGCAGGAGGCGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS TCA 90 bp | TCCTCCTGGATCTCCTGGGTGCGCCTGTTGAGCTGCGCGTTGTACTaGTGTTTCAAGAAGCGCCCCAGCTCTGTCTTGCGCCGGAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SSWISWVRLLSCALY*CFKKRPSSVLRRRA Trigger: CGCCCTCCGGCGCAAGACAGAGCTGGGGCGCTTCTTGAAACATCAGTACAACGCGCAGCTCAACAGGCGCACCCAGGAGATCCAGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094441.11 ENSMUST00000131679.5 |
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| CDS GCA 90 bp | ATCAGCTTCCTCTGTTCTTCTCGGGCTGACTTCAGGTCCTGGTGCTaGTCGCGGAGCCTTTGCTCCCGCAGGCCCATGCTCAGCCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ISFLCSSRADFRSWC*SRSLCSRRPMLSLS Trigger: GCTCAGGCTGAGCATGGGCCTGCGGGAGCAAAGGCTCCGCGAGCAGCACCAGGACCTGAAGTCAGCCCGAGAAGAACAGAGGAAGCTGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS GCA 90 bp | GCAATCAGCTTCCTCTGTTCTTCTCGGGCTGACTTCAGGTCCTGGTaGTGCTCGCGGAGCCTTTGCTCCCGCAGGCCCATGCTCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AISFLCSSRADFRSW*CSRSLCSRRPMLSL Trigger: CAGGCTGAGCATGGGCCTGCGGGAGCAAAGGCTCCGCGAGCAGCACCAGGACCTGAAGTCAGCCCGAGAAGAACAGAGGAAGCTGATTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS GCA 90 bp | CCTCTCCTCCTCGACTCTCATCCTCGCCTCGGCTTCCCGGCGGGCTaGTGCGTACTGGTTCTCCAACCGCTTGTTCTCCTGCTTCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PLLLDSHPRLGFPAG*CVLVLQPLVLLLLC Trigger: ACAGAGAAGCAGGAGAACAAGCGGTTGGAGAACCAGTACGCAGCAGCCCGCCGGGAAGCCGAGGCGAGGATGAGAGTCGAGGAGGAGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094441.11 ENSMUST00000131679.5 |
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| CDS TCA 90 bp | CCAGCTCCGCAGCCAGCAAGTCCTGTTCCTCCAGGAGAAGCTCTCTaGGCCTCTCCCGCCGGAGCTCCAGAATCTTCCTCTTCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PAPQPASPVPPGEAL*ASPAGAPESSSSPP Trigger: AGGAGGAGAAGAGGAAGATTCTGGAGCTCCGGCGGGAGAGGCTCAGAGAGCTTCTCCTGGAGGAACAGGACTTGCTGGCTGCGGAGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS GCA 90 bp | TTCTCTGCCATGGTCTTCGCCTCCTGCTGCAGCAAAGCATTGGAGTaGTCTTCCGCCTGCCTGGCCTCCTCCTCTTCCTCCTCCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSAMVFASCCSKALE*SSACLASSSSSSSC Trigger: GCAGGAGGAGGAGGAAGAGGAGGAGGCCAGGCAGGCGGAAGAGCACTCCAATGCTTTGCTGCAGCAGGAGGCGAAGACCATGGCAGAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS CCA 90 bp | TCGACTCTCATCCTCGCCTCGGCTTCCCGGCGGGCTGCTGCGTACTaGTTCTCCAACCGCTTGTTCTCCTGCTTCTCTGTGGCTTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: STLILASASRRAAAY*FSNRLFSCFSVASC Trigger: GCAAGAAGCCACAGAGAAGCAGGAGAACAAGCGGTTGGAGAACCAGTACGCAGCAGCCCGCCGGGAAGCCGAGGCGAGGATGAGAGTCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR CAA 90 bp | AAGGCCTGTCGGGGTGAGAAGGGCTCTCAGGGGACGCTGCACACCCATGGCATCTCAAGCTCTCGAAGTTaGGGGTTGTTCTTCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KACRGEKGSQGTLHTHGISSSRS*GLFFFQ Trigger: CTGGAAGAAGAACAACCCCAAACTTCGAGAGCTTGA...GATGCCATGGGTGTGCAGCGTCCCCTGAGAGCCCTTCTCACCCCGACAGGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR CAA 90 bp | CTGGTCCTCCCTGAGCTGACAGCTACAGGTGAGATGAGAGGAACCTACGTATTCTGCTGCAGCAAAGCATaGGAGTGCTCTTCCGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LVLPELTATGEMRGTYVFCCSKA*ECSSAC Trigger: GCAGGCGGAAGAGCACTCCAATGCTTTGCTGCAGCA...GAATACGTAGGTTCCTCTCATCTCACCTGTAGCTGTCAGCTCAGGGAGGACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR CAA 90 bp | AGCCCTCAGAGCCCAGGCAAACTCTCGGTTCCCATAACCAGGAACAACACCGTATTTCTCCAGCTGCAGTaGCTCCTCGATGACCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SPQSPGKLSVPITRNNTVFLQLQ*LLDDLL Trigger: AAGCAGGTCATCGAGGAGCAACTGCAGCTGGAGAAA...TACGGTGTTGTTCCTGGTTATGGGAACCGAGAGTTTGCCTGGGCTCTGAGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS CCA 90 bp | TCTTCTCACAATGGTAGGCGTGCATGCTCCGCTGGTAGGAGATCTTaGAGCTCCATTCGATCTGTTTCGAGTTGTGGATGTCCCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSHNGRRACSAGRRS*SSIRSVSSCGCPRS Trigger: GGACCTGGGACATCCACAACTCGAAACAGATCGAATGGAGCTCCAAGATCTCCTACCAGCGGAGCATGCACGCCTACCATTGTGAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR CAA 90 bp | CGGCTAGCCAACCAAGTGACCTTGAGGACTCTTTCGGGGTGGCACATGTTGGGCTCTCGAAGTTTGGGGTaGTTCTTCTTCCAGTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RLANQVTLRTLSGWHMLGSRSLG*FFFQCS Trigger: TGAACACTGGAAGAAGAACAACCCCAAACTTCGAGA...GCCCAACATGTGCCACCCCGAAAGAGTCCTCAAGGTCACTTGGTTGGCTAGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR CAA 90 bp | CCAACTCGAGGAAGGCTACGGAAAGATACAAGCCATAACAACCCGACTGTCGCCTGGTTCTCCAACCGCTaGTTCTCCTGCTTCTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PTRGRLRKDTSHNNPTVAWFSNR*FSCFSV Trigger: CACAGAGAAGCAGGAGAACAAGCGGTTGGAGAACCA...GGCGACAGTCGGGTTGTTATGGCTTGTATCTTTCCGTAGCCTTCCTCGAGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS TCA 90 bp | TGGAGCTCCATTCGATCTGTTTCGAGTTGTGGATGTCCCAGGTCCTaGAATAGCGACTGTTCTGTTCCCACTGCTGGCGAAACTGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WSSIRSVSSCGCPRS*NSDCSVPTAGETGP Trigger: AGGACCAGTTTCGCCAGCAGTGGGAACAGAACAGTCGCTATTTCAGGACCTGGGACATCCACAACTCGAAACAGATCGAATGGAGCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR CAA 90 bp | TTGACGAGGGCGAGTGCTCACAAATGTGTAGTGGAAACAGAGCTGGGGGCCACATTTCTTCTTTCTGTGTaGCCCAAGAATTTATCACGT | + |
|
Preference number: 5 (lower is better) Translates to: LTRASAHKCVVETELGATFLLSV*PKNLSR Trigger: ACGTGATAAATTCTTGGGCAACACAGAAAGAAGAAA...TGTGGCCCCCAGCTCTGTTTCCACTACACATTTGTGAGCACTCGCCCTCGTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS-3UTR CAA 90 bp | CTTCTTCTTAGACTAACTCTAACATGTACTTATAAAGCATTCCTGATCTCTGGTTGTTCCTTCTTCAGTTaGGTTGCCTCCATCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLLRLTLTCTYKAFLISGCSFFS*VASISF Trigger: GAAGGAGATGGAGGCAACCAAACTGAAGAAGGAACA...ACCAGAGATCAGGAATGCTTTATAAGTACATGTTAGAGTTAGTCTAAGAAGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS GCA 72 bp | GCCCGGGCTTGCTCCCGCCTGGCCAGTTCCACCTGCTaGAACTCGCCTTCCTTCTCCAGGAGGGCCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ARACSRLASSTC*NSPSFSRRACR Trigger: CCTGCAGGCCCTCCTGGAGAAGGAAGGCGAGTTGCAGCAGGTGGAACTGGCCAGGCGGGAGCAAGCCCGGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094441.11 ENSMUST00000131679.5 |
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| CDS GCA 72 bp | TCGGCCCGGGCTTGCTCCCGCCTGGCCAGTTCCACCTaGTGCAACTCGCCTTCCTTCTCCAGGAGGGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SARACSRLASST*CNSPSFSRRAC Trigger: GCAGGCCCTCCTGGAGAAGGAAGGCGAGTTGCAGCAGGTGGAACTGGCCAGGCGGGAGCAAGCCCGGGCCGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094441.11 ENSMUST00000131679.5 |
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| CDS GCA 72 bp | ATGACCTGCTTCATCCAGGCCGCATCGGCCCGGGCTTaGTCCCGCCTGGCCAGTTCCACCTGCTGCAACTCG | + |
|
Preference number: 6 (lower is better) Translates to: MTCFIQAASARA*SRLASSTCCNS Trigger: CGAGTTGCAGCAGGTGGAACTGGCCAGGCGGGAGCAAGCCCGGGCCGATGCGGCCTGGATGAAGCAGGTCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094441.11 ENSMUST00000131679.5 |
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| CDS CAA 72 bp | GATGACCTGCTTCATCCAGGCCGCATCGGCCCGGGCTaGCTCCCGCCTGGCCAGTTCCACCTGCTGCAACTC | + |
|
Preference number: 6 (lower is better) Translates to: DDLLHPGRIGPG*LPPGQFHLLQL Trigger: GAGTTGCAGCAGGTGGAACTGGCCAGGCGGGAGCAAGCCCGGGCCGATGCGGCCTGGATGAAGCAGGTCATC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094441.11 ENSMUST00000131679.5 |
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| CDS TCA 72 bp | CGCGGAGCCTTTGCTCCCGCAGGCCCATGCTCAGCCTaGGCTCATCCAGCTCCGCAGCCAGCAAGTCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RGAFAPAGPCSA*AHPAPQPASPV Trigger: AACAGGACTTGCTGGCTGCGGAGCTGGATGAGCTCAGGCTGAGCATGGGCCTGCGGGAGCAAAGGCTCCGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS GCA 72 bp | GCTGACTTCAGGTCCTGGTGCTGCTCGCGGAGCCTTTaGTCCCGCAGGCCCATGCTCAGCCTGAGCTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: ADFRSWCCSRSL*SRRPMLSLSSS Trigger: GGATGAGCTCAGGCTGAGCATGGGCCTGCGGGAGCAAAGGCTCCGCGAGCAGCACCAGGACCTGAAGTCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
||
| CDS CCA 72 bp | GCTGCAGCAAAGCATTGGAGTGCTCTTCCGCCTGCCTaGCCTCCTCCTCTTCCTCCTCCTCCTGCCGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AAAKHWSALPPA*PPPLPPPPAGL Trigger: CAGCCCGGCAGGAGGAGGAGGAAGAGGAGGAGGCCAGGCAGGCGGAAGAGCACTCCAATGCTTTGCTGCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS CAA 90 bp | TTGCTCCTCGATGACCTGCTTCATCCAGGCCGCATCGGCCCGGGCTaGCTCCCGCCTGGCCAGTTCCACCTGCTGCAACTCGCCTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLLDDLLHPGRIGPG*LPPGQFHLLQLAFL Trigger: AAGGAAGGCGAGTTGCAGCAGGTGGAACTGGCCAGGCGGGAGCAAGCCCGGGCCGATGCGGCCTGGATGAAGCAGGTCATCGAGGAGCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094441.11 ENSMUST00000131679.5 |
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| CDS GCA 72 bp | CGTGCTTTCTCCAGCTGCAGTTGCTCCTCGATGACCTaGTTCATCCAGGCCGCATCGGCCCGGGCTTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: RAFSSCSCSSMT*FIQAASARACS Trigger: GGAGCAAGCCCGGGCCGATGCGGCCTGGATGAAGCAGGTCATCGAGGAGCAACTGCAGCTGGAGAAAGCACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094441.11 ENSMUST00000131679.5 |
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| CDS GCA 72 bp | GTCAGAACCTCACTCATCAGTCTGTCCCGCGCGACCTaGTCTCGGGCCCACTCGGCCTCTCTCTTCTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: VRTSLISLSRAT*SRAHSASLFSH Trigger: GTGGGAGAAGAGAGAGGCCGAGTGGGCCCGAGAGCAGGTCGCGCGGGACAGACTGATGAGTGAGGTTCTGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094441.11 ENSMUST00000131679.5 |
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| CDS GCA 72 bp | TCCTGCTGCAGCAAAGCATTGGAGTGCTCTTCCGCCTaGCTGGCCTCCTCCTCTTCCTCCTCCTCCTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SCCSKALECSSA*LASSSSSSSCR Trigger: CCGGCAGGAGGAGGAGGAAGAGGAGGAGGCCAGGCAGGCGGAAGAGCACTCCAATGCTTTGCTGCAGCAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS CCA 72 bp | ATCCTCGCCTCGGCTTCCCGGCGGGCTGCTGCGTACTaGTTCTCCAACCGCTTGTTCTCCTGCTTCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: ILASASRRAAAY*FSNRLFSCFSV Trigger: CACAGAGAAGCAGGAGAACAAGCGGTTGGAGAACCAGTACGCAGCAGCCCGCCGGGAAGCCGAGGCGAGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094441.11 ENSMUST00000131679.5 |
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| CDS CCA 72 bp | CTGCCATGGTCTTCGCCTCCTGCTGCAGCAAAGCATTaGAGTGCTCTTCCGCCTGCCTGGCCTCCTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LPWSSPPAAAKH*SALPPAWPPPL Trigger: AAGAGGAGGAGGCCAGGCAGGCGGAAGAGCACTCCAATGCTTTGCTGCAGCAGGAGGCGAAGACCATGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS TCA 72 bp | CAGCCAGCAAGTCCTGTTCCTCCAGGAGAAGCTCTCTaGGCCTCTCCCGCCGGAGCTCCAGAATCTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: QPASPVPPGEAL*ASPAGAPESSS Trigger: AGAGGAAGATTCTGGAGCTCCGGCGGGAGAGGCTCAGAGAGCTTCTCCTGGAGGAACAGGACTTGCTGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS GCA 72 bp | TGTACTGATGTTTCAAGAAGCGCCCCAGCTCTGTCTTaGGCCGGAGGGCGGCCATCTGCCTCCTTTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: CTDVSRSAPALS*AGGRPSASFPP Trigger: AGGAGGAAAGGAGGCAGATGGCCGCCCTCCGGCGCAAGACAGAGCTGGGGCGCTTCTTGAAACATCAGTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS GCA 72 bp | TGTACTGATGTTTCAAGAAGCGCCCCAGCTCTGTCTTaGGCCGGAGGGCGGCCATCTGCCTCCTTTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: CTDVSRSAPALS*AGGRPSASFPP Trigger: TGGAGGAAAGGAGGCAGATGGCCGCCCTCCGGCGCAAGACAGAGCTGGGGCGCTTCTTGAAACATCAGTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131679.5 |
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| CDS TCA 72 bp | TTCTGTTCCCACTGCTGGCGAAACTGGTCCTCCTGCTaGTGCTGGCGCTGGCGAAGATCCATGTGTTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: FCSHCWRNWSSC*CWRWRRSMCFR Trigger: CCGGAAACACATGGATCTTCGCCAGCGCCAGCATCAGCAGGAGGACCAGTTTCGCCAGCAGTGGGAACAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS CAA 72 bp | CCCTCCTCGAGACTCCTGATGAGTTTCTCCCTGTGTTaGAGGGTCTCCTCCTGTGCCCGCCGGTTCTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: PSSRLLMSFSLC*RVSSCARRFCS Trigger: TGAACAGAACCGGCGGGCACAGGAGGAGACCCTCAAACACAGGGAGAAACTCATCAGGAGTCTCGAGGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094441.11 ENSMUST00000131679.5 |
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| CDS CAA 72 bp | TCCCGGCGGGCTGCTGCGTACTGGTTCTCCAACCGCTaGTTCTCCTGCTTCTCTGTGGCTTCTTGCTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SRRAAAYWFSNR*FSCFSVASCCF Trigger: AAAACAGCAAGAAGCCACAGAGAAGCAGGAGAACAAGCGGTTGGAGAACCAGTACGCAGCAGCCCGCCGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS CAA 90 bp | AACTGCTTCCCCTCCTCGAGACTCCTGATGAGTTTCTCCCTGTGTTaGAGGGTCTCCTCCTGTGCCCGCCGGTTCTGTTCAATCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: NCFPSSRLLMSFSLC*RVSSCARRFCSIFS Trigger: GGAGAAGATTGAACAGAACCGGCGGGCACAGGAGGAGACCCTCAAACACAGGGAGAAACTCATCAGGAGTCTCGAGGAGGGGAAGCAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS GCA 72 bp | GATGAGTTTCTCCCTGTGTTTGAGGGTCTCCTCCTGTaGCCGCCGGTTCTGTTCAATCTTCTCCAGGATCTG | + |
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Preference number: 6 (lower is better) Translates to: DEFLPVFEGLLL*PPVLFNLLQDL Trigger: CAGATCCTGGAGAAGATTGAACAGAACCGGCGGGCACAGGAGGAGACCCTCAAACACAGGGAGAAACTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094441.11 ENSMUST00000131679.5 |
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| CDS CCA 72 bp | AATGGTAGGCGTGCATGCTCCGCTGGTAGGAGATCTTaGAGCTCCATTCGATCTGTTTCGAGTTGTGGATGT | + |
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Preference number: 6 (lower is better) Translates to: NGRRACSAGRRS*SSIRSVSSCGC Trigger: ACATCCACAACTCGAAACAGATCGAATGGAGCTCCAAGATCTCCTACCAGCGGAGCATGCACGCCTACCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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| CDS TCA 72 bp | ATTCGATCTGTTTCGAGTTGTGGATGTCCCAGGTCCTaGAATAGCGACTGTTCTGTTCCCACTGCTGGCGAA | + |
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Preference number: 6 (lower is better) Translates to: IRSVSSCGCPRS*NSDCSVPTAGE Trigger: TTCGCCAGCAGTGGGAACAGAACAGTCGCTATTTCAGGACCTGGGACATCCACAACTCGAAACAGATCGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094441.11 |
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