Pregenerated sensors for TCHHL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027908Ensembl transcript IDs: ENSMUST00000029516.3
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCTCCTCTCCCTCACTGGGCTCCACAGCTGCCCCTGGGCCTCCTTTaGTCCTTGAGCTCAGACCATCATGCAGACCATCTCTGGCAGACT | + |
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Preference number: 5 (lower is better) Translates to: PPLPHWAPQLPLGLL*SLSSDHHADHLWQT Trigger: AGTCTGCCAGAGATGGTCTGCATGATGGTCTGAGCTCAAGGACCAAAGGAGGCCCAGGGGCAGCTGTGGAGCCCAGTGAGGGAGAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS TCA 90 bp | TCCCTCACTGGGCTCCACAGCTGCCCCTGGGCCTCCTTTGGTCCTTaGGCTCAGACCATCATGCAGACCATCTCTGGCAGACTGTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: SLTGLHSCPWASFGP*AQTIMQTISGRLFL Trigger: CAGGAACAGTCTGCCAGAGATGGTCTGCATGATGGTCTGAGCTCAAGGACCAAAGGAGGCCCAGGGGCAGCTGTGGAGCCCAGTGAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS GCA 90 bp | GCTGCCCATCTTCTTGGATTGACAGCACTACTGCCTCCTGCTCTCTaGTGCTCTCACCTGGTGCTCCCTGCTTCTGGGGATCTGGGTTGT | + |
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Preference number: 5 (lower is better) Translates to: AAHLLGLTALLPPAL*CSHLVLPASGDLGC Trigger: ACAACCCAGATCCCCAGAAGCAGGGAGCACCAGGTGAGAGCAGCAGAGAGCAGGAGGCAGTAGTGCTGTCAATCCAAGAAGATGGGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 90 bp | TCTCTGGCAGACTGTTCCTGTCCCTCTGGGAGCTGCCCATCTTCTTaGATTGACAGCACTACTGCCTCCTGCTCTCTGCTGCTCTCACCT | + |
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Preference number: 5 (lower is better) Translates to: SLADCSCPSGSCPSS*IDSTTASCSLLLSP Trigger: AGGTGAGAGCAGCAGAGAGCAGGAGGCAGTAGTGCTGTCAATCCAAGAAGATGGGCAGCTCCCAGAGGGACAGGAACAGTCTGCCAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS GCA 90 bp | CCTCAAGGAGCTGTCTCAGCTCTGTGCGGGTCAGTGTTGCCTGGTTaGCGCCATCCTCAATGGCGTACTTGTGGAATATCTCAACGACAC | + |
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Preference number: 5 (lower is better) Translates to: PQGAVSALCGSVLPG*RHPQWRTCGISQRH Trigger: GTGTCGTTGAGATATTCCACAAGTACGCCATTGAGGATGGCGGCAACCAGGCAACACTGACCCGCACAGAGCTGAGACAGCTCCTTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 90 bp | CGGGTCAGTGTTGCCTGGTTGCCGCCATCCTCAATGGCGTACTTGTaGAATATCTCAACGACACAGAAGACACCTCTCAGGAGCCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: RVSVAWLPPSSMAYL*NISTTQKTPLRSLG Trigger: GCCAAGGCTCCTGAGAGGTGTCTTCTGTGTCGTTGAGATATTCCACAAGTACGCCATTGAGGATGGCGGCAACCAGGCAACACTGACCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 90 bp | TCTCCCTCAAGGAGCTGTCTCAGCTCTGTGCGGGTCAGTGTTGCCTaGTTGCCGCCATCCTCAATGGCGTACTTGTGGAATATCTCAACG | + |
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Preference number: 5 (lower is better) Translates to: SPSRSCLSSVRVSVA*LPPSSMAYLWNIST Trigger: CGTTGAGATATTCCACAAGTACGCCATTGAGGATGGCGGCAACCAGGCAACACTGACCCGCACAGAGCTGAGACAGCTCCTTGAGGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS GCA 90 bp | AATTTCTCCCTCAAGGAGCTGTCTCAGCTCTGTGCGGGTCAGTGTTaGCTGGTTGCCGCCATCCTCAATGGCGTACTTGTGGAATATCTC | + |
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Preference number: 5 (lower is better) Translates to: NFSLKELSQLCAGQC*LVAAILNGVLVEYL Trigger: GAGATATTCCACAAGTACGCCATTGAGGATGGCGGCAACCAGGCAACACTGACCCGCACAGAGCTGAGACAGCTCCTTGAGGGAGAAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 90 bp | TCAGCTCTGTGCGGGTCAGTGTTGCCTGGTTGCCGCCATCCTCAATaGCGTACTTGTGGAATATCTCAACGACACAGAAGACACCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: SALCGSVLPGCRHPQ*RTCGISQRHRRHLS Trigger: TGAGAGGTGTCTTCTGTGTCGTTGAGATATTCCACAAGTACGCCATTGAGGATGGCGGCAACCAGGCAACACTGACCCGCACAGAGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS GCA 90 bp | GACTCTGTGAATCCTCTGGTACATGTGGTTCAGCTATCTCTGAGCTaGTCTTACCTACCTCTGGAGCCAGGCTGTTGGGAATTTCACAAA | + |
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Preference number: 5 (lower is better) Translates to: DSVNPLVHVVQLSLS*SYLPLEPGCWEFHK Trigger: TTTGTGAAATTCCCAACAGCCTGGCTCCAGAGGTAGGTAAGAGCAGCTCAGAGATAGCTGAACCACATGTACCAGAGGATTCACAGAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 90 bp | CTCAGACACATTTCTTGGCAGGCTGTGGGTCTTAATGTCTTCACATaGGCTCACCATAGGCTCATCACCTACCTCACCTTCTTCATTGCT | + |
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Preference number: 5 (lower is better) Translates to: LRHISWQAVGLNVFT*AHHRLITYLTFFIA Trigger: AGCAATGAAGAAGGTGAGGTAGGTGATGAGCCTATGGTGAGCCCATGTGAAGACATTAAGACCCACAGCCTGCCAAGAAATGTGTCTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS TCA 90 bp | CTTCATTGCTGGGCTGACCTGATGATGCCATTTCTGATGGAAATATaGGCCTTTCTTGAGTTGGCCCAACCCCTACTACCTGCTGAATGT | + |
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Preference number: 5 (lower is better) Translates to: LHCWADLMMPFLMEI*AFLELAQPLLPAEC Trigger: ACATTCAGCAGGTAGTAGGGGTTGGGCCAACTCAAGAAAGGCTCATATTTCCATCAGAAATGGCATCATCAGGTCAGCCCAGCAATGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 90 bp | GACTTCCTGAGCATCTTCTTTTGGCTGTTGGTTCTCAGGGTCATTTaGCTCAGACACATTTCTTGGCAGGCTGTGGGTCTTAATGTCTTC | + |
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Preference number: 5 (lower is better) Translates to: DFLSIFFWLLVLRVI*LRHISWQAVGLNVF Trigger: GAAGACATTAAGACCCACAGCCTGCCAAGAAATGTGTCTGAGCCAAATGACCCTGAGAACCAACAGCCAAAAGAAGATGCTCAGGAAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 90 bp | GCCTCTGAATCATATGGTCACTTATCTTGGTGTCACTTAGCCTCCTaGATGGTTTACTTCTTTCTCTTGGGATCTCCTGTGTTGGACTGG | + |
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Preference number: 5 (lower is better) Translates to: ASESYGHLSWCHLAS*MVYFFLLGSPVLDW Trigger: CCAGTCCAACACAGGAGATCCCAAGAGAAAGAAGTAAACCATCCAGGAGGCTAAGTGACACCAAGATAAGTGACCATATGATTCAGAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 90 bp | GACTGGTCCCTTGTATTGTGTTCTCTTTCTTGTGCTGGCAATCCGTaGCTCTCAGCTACTTTAGCATCAGCTTTGGGCTCCTCTAAATTT | + |
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Preference number: 5 (lower is better) Translates to: DWSLVLCSLSCAGNP*LSATLASALGSSKF Trigger: AAATTTAGAGGAGCCCAAAGCTGATGCTAAAGTAGCTGAGAGCCACGGATTGCCAGCACAAGAAAGAGAACACAATACAAGGGACCAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS TCA 90 bp | ATGTTCTTTCCACTCCCCCTCCTGTTCTCCTCTACTAGATGTTTCTaGAACATTTCTGCTCCGGCTTTGAACAGACTGGTCCCTTGTATT | + |
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Preference number: 5 (lower is better) Translates to: MFFPLPLLFSSTRCF*NISAPALNRLVPCI Trigger: AATACAAGGGACCAGTCTGTTCAAAGCCGGAGCAGAAATGTTTCAGAAACATCTAGTAGAGGAGAACAGGAGGGGGAGTGGAAAGAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 90 bp | GTTCCTCATCTTCAGTTGGCCTCTGAATCATATGGTCACTTATCTTaGTGTCACTTAGCCTCCTGGATGGTTTACTTCTTTCTCTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: VPHLQLASESYGHLS*CHLASWMVYFFLLG Trigger: TCCCAAGAGAAAGAAGTAAACCATCCAGGAGGCTAAGTGACACCAAGATAAGTGACCATATGATTCAGAGGCCAACTGAAGATGAGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS GCA 90 bp | TCTCTTAAATTGGACTCCATCATATTCAGTTGCTGGTACATTTTGTaGGACTTCCTGAGCATCTTCTTTTGGCTGTTGGTTCTCAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: SLKLDSIIFSCWYIL*DFLSIFFWLLVLRV Trigger: GACCCTGAGAACCAACAGCCAAAAGAAGATGCTCAGGAAGTCGCACAAAATGTACCAGCAACTGAATATGATGGAGTCCAATTTAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS TCA 90 bp | GCTTCTTTTCCTGAGACAGAATCTTCCTTAATTTCAGGGAGATTCTaGTTTCCTTCTTCAGAACTTGGATCTTTTGCAGCAGAGTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: ASFPETESSLISGRF*FPSSELGSFAAESF Trigger: AAAGGACTCTGCTGCAAAAGATCCAAGTTCTGAAGAAGGAAATCAGAATCTCCCTGAAATTAAGGAAGATTCTGTCTCAGGAAAAGAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS GCA 90 bp | TTCGACTACTGTATTTCTCTTAAATTGGACTCCATCATATTCAGTTaGTGGTACATTTTGTGCGACTTCCTGAGCATCTTCTTTTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: FDYCISLKLDSIIFS*WYILCDFLSIFFWL Trigger: CAGCCAAAAGAAGATGCTCAGGAAGTCGCACAAAATGTACCAGCAACTGAATATGATGGAGTCCAATTTAAGAGAAATACAGTAGTCGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 90 bp | GACTACTGTATTTCTCTTAAATTGGACTCCATCATATTCAGTTGCTaGTACATTTTGTGCGACTTCCTGAGCATCTTCTTTTGGCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: DYCISLKLDSIIFSC*YILCDFLSIFFWLL Trigger: CAACAGCCAAAAGAAGATGCTCAGGAAGTCGCACAAAATGTACCAGCAACTGAATATGATGGAGTCCAATTTAAGAGAAATACAGTAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS TCA 90 bp | AAATTTGTTTCAGGTGGTATTCTGCCAGCATCCTTTCCAGTTTCTTaGGCCTCAGATAGTTTAGTATCATCCATAGGCTCAAAAATTTCC | + |
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Preference number: 5 (lower is better) Translates to: KFVSGGILPASFPVS*ASDSLVSSIGSKIS Trigger: GGAAATTTTTGAGCCTATGGATGATACTAAACTATCTGAGGCTCAAGAAACTGGAAAGGATGCTGGCAGAATACCACCTGAAACAAATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS TCA 90 bp | TCAGATAGTTTAGTATCATCCATAGGCTCAAAAATTTCCTGTGTTTaGGATGATTTCCTGGTAGCAGCTACTACTGACAAATCAGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: SDSLVSSIGSKISCV*DDFLVAATTDKSVF Trigger: GAACACTGATTTGTCAGTAGTAGCTGCTACCAGGAAATCATCTCAAACACAGGAAATTTTTGAGCCTATGGATGATACTAAACTATCTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 90 bp | ACCTCCTCTCCCTCACTGGGCTCCACAGCTGCCCCTGGGCCTCCTTaGGTCCTTGAGCTCAGACCATCATGCAGACCATCTCTGGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: TSSPSLGSTAAPGPP*VLELRPSCRPSLAD Trigger: GTCTGCCAGAGATGGTCTGCATGATGGTCTGAGCTCAAGGACCAAAGGAGGCCCAGGGGCAGCTGTGGAGCCCAGTGAGGGAGAGGAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS TCA 72 bp | GGGCTCCACAGCTGCCCCTGGGCCTCCTTTGGTCCTTaGGCTCAGACCATCATGCAGACCATCTCTGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: GLHSCPWASFGP*AQTIMQTISGR Trigger: TCTGCCAGAGATGGTCTGCATGATGGTCTGAGCTCAAGGACCAAAGGAGGCCCAGGGGCAGCTGTGGAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 72 bp | CCTCACTGGGCTCCACAGCTGCCCCTGGGCCTCCTTTaGTCCTTGAGCTCAGACCATCATGCAGACCATCTC | + |
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Preference number: 6 (lower is better) Translates to: PHWAPQLPLGLL*SLSSDHHADHL Trigger: GAGATGGTCTGCATGATGGTCTGAGCTCAAGGACCAAAGGAGGCCCAGGGGCAGCTGTGGAGCCCAGTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 72 bp | CCCTCACTGGGCTCCACAGCTGCCCCTGGGCCTCCTTaGGTCCTTGAGCTCAGACCATCATGCAGACCATCT | + |
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Preference number: 6 (lower is better) Translates to: PSLGSTAAPGPP*VLELRPSCRPS Trigger: AGATGGTCTGCATGATGGTCTGAGCTCAAGGACCAAAGGAGGCCCAGGGGCAGCTGTGGAGCCCAGTGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS GCA 72 bp | CTCAAGGAGCTGTCTCAGCTCTGTGCGGGTCAGTGTTaGCTGGTTGCCGCCATCCTCAATGGCGTACTTGTG | + |
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Preference number: 6 (lower is better) Translates to: LKELSQLCAGQC*LVAAILNGVLV Trigger: CACAAGTACGCCATTGAGGATGGCGGCAACCAGGCAACACTGACCCGCACAGAGCTGAGACAGCTCCTTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 72 bp | CCTCAAGGAGCTGTCTCAGCTCTGTGCGGGTCAGTGTaGCCTGGTTGCCGCCATCCTCAATGGCGTACTTGT | + |
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Preference number: 6 (lower is better) Translates to: PQGAVSALCGSV*PGCRHPQWRTC Trigger: ACAAGTACGCCATTGAGGATGGCGGCAACCAGGCAACACTGACCCGCACAGAGCTGAGACAGCTCCTTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS TCA 72 bp | TTCCTGTCCCTCTGGGAGCTGCCCATCTTCTTGGATTaGCAGCACTACTGCCTCCTGCTCTCTGCTGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: FLSLWELPIFLD*QHYCLLLSAAL Trigger: GAGAGCAGCAGAGAGCAGGAGGCAGTAGTGCTGTCAATCCAAGAAGATGGGCAGCTCCCAGAGGGACAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS GCA 72 bp | CTTCTTGGATTGACAGCACTACTGCCTCCTGCTCTCTaGTGCTCTCACCTGGTGCTCCCTGCTTCTGGGGAT | + |
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Preference number: 6 (lower is better) Translates to: LLGLTALLPPAL*CSHLVLPASGD Trigger: ATCCCCAGAAGCAGGGAGCACCAGGTGAGAGCAGCAGAGAGCAGGAGGCAGTAGTGCTGTCAATCCAAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS GCA 72 bp | CCATCTCTGGCAGACTGTTCCTGTCCCTCTGGGAGCTaGCCATCTTCTTGGATTGACAGCACTACTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PSLADCSCPSGS*PSSWIDSTTAS Trigger: GGAGGCAGTAGTGCTGTCAATCCAAGAAGATGGGCAGCTCCCAGAGGGACAGGAACAGTCTGCCAGAGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS GCA 72 bp | CCTGGGCCTCCTTTGGTCCTTGAGCTCAGACCATCATaGAGACCATCTCTGGCAGACTGTTCCTGTCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: PGPPLVLELRPS*RPSLADCSCPS Trigger: AGAGGGACAGGAACAGTCTGCCAGAGATGGTCTGCATGATGGTCTGAGCTCAAGGACCAAAGGAGGCCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 72 bp | AGGAGCTGTCTCAGCTCTGTGCGGGTCAGTGTTGCCTaGTTGCCGCCATCCTCAATGGCGTACTTGTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: RSCLSSVRVSVA*LPPSSMAYLWN Trigger: ATTCCACAAGTACGCCATTGAGGATGGCGGCAACCAGGCAACACTGACCCGCACAGAGCTGAGACAGCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 72 bp | TGGTCCTTGAGCTCAGACCATCATGCAGACCATCTCTaGCAGACTGTTCCTGTCCCTCTGGGAGCTGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: WSLSSDHHADHL*QTVPVPLGAAH Trigger: ATGGGCAGCTCCCAGAGGGACAGGAACAGTCTGCCAGAGATGGTCTGCATGATGGTCTGAGCTCAAGGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 90 bp | CCCTCAAGGAGCTGTCTCAGCTCTGTGCGGGTCAGTGTTGCCTGGTaGCCGCCATCCTCAATGGCGTACTTGTGGAATATCTCAACGACA | + |
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Preference number: 6 (lower is better) Translates to: PSRSCLSSVRVSVAW*PPSSMAYLWNISTT Trigger: TGTCGTTGAGATATTCCACAAGTACGCCATTGAGGATGGCGGCAACCAGGCAACACTGACCCGCACAGAGCTGAGACAGCTCCTTGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS GCA 72 bp | GCTGTCTCAGCTCTGTGCGGGTCAGTGTTGCCTGGTTaGCGCCATCCTCAATGGCGTACTTGTGGAATATCT | + |
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Preference number: 6 (lower is better) Translates to: AVSALCGSVLPG*RHPQWRTCGIS Trigger: AGATATTCCACAAGTACGCCATTGAGGATGGCGGCAACCAGGCAACACTGACCCGCACAGAGCTGAGACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 72 bp | AGCTGTCTCAGCTCTGTGCGGGTCAGTGTTGCCTGGTaGCCGCCATCCTCAATGGCGTACTTGTGGAATATC | + |
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Preference number: 6 (lower is better) Translates to: SCLSSVRVSVAW*PPSSMAYLWNI Trigger: GATATTCCACAAGTACGCCATTGAGGATGGCGGCAACCAGGCAACACTGACCCGCACAGAGCTGAGACAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 90 bp | GTGCGGGTCAGTGTTGCCTGGTTGCCGCCATCCTCAATGGCGTACTaGTGGAATATCTCAACGACACAGAAGACACCTCTCAGGAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: VRVSVAWLPPSSMAY*WNISTTQKTPLRSL Trigger: AAGGCTCCTGAGAGGTGTCTTCTGTGTCGTTGAGATATTCCACAAGTACGCCATTGAGGATGGCGGCAACCAGGCAACACTGACCCGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 90 bp | CAATTTCTCCCTCAAGGAGCTGTCTCAGCTCTGTGCGGGTCAGTGTaGCCTGGTTGCCGCCATCCTCAATGGCGTACTTGTGGAATATCT | + |
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Preference number: 6 (lower is better) Translates to: QFLPQGAVSALCGSV*PGCRHPQWRTCGIS Trigger: AGATATTCCACAAGTACGCCATTGAGGATGGCGGCAACCAGGCAACACTGACCCGCACAGAGCTGAGACAGCTCCTTGAGGGAGAAATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 72 bp | GTTGCCTGGTTGCCGCCATCCTCAATGGCGTACTTGTaGAATATCTCAACGACACAGAAGACACCTCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: VAWLPPSSMAYL*NISTTQKTPLR Trigger: CCTGAGAGGTGTCTTCTGTGTCGTTGAGATATTCCACAAGTACGCCATTGAGGATGGCGGCAACCAGGCAAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS TCA 72 bp | GGTGCTCCCTGCTTCTGGGGATCTGGGTTGTTAGTGTaGCTTTCTTGCTTAGCATCTCCATGGTGGTCTATC | + |
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Preference number: 6 (lower is better) Translates to: GAPCFWGSGLLV*LSCLASPWWSI Trigger: GATAGACCACCATGGAGATGCTAAGCAAGAAAGTCACACTAACAACCCAGATCCCCAGAAGCAGGGAGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 72 bp | GGGTCATTTGGCTCAGACACATTTCTTGGCAGGCTGTaGGTCTTAATGTCTTCACATGGGCTCACCATAGGC | + |
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Preference number: 6 (lower is better) Translates to: GSFGSDTFLGRL*VLMSSHGLTIG Trigger: GCCTATGGTGAGCCCATGTGAAGACATTAAGACCCACAGCCTGCCAAGAAATGTGTCTGAGCCAAATGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 72 bp | AGTGTTGCCTGGTTGCCGCCATCCTCAATGGCGTACTaGTGGAATATCTCAACGACACAGAAGACACCTCTC | + |
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Preference number: 6 (lower is better) Translates to: SVAWLPPSSMAY*WNISTTQKTPL Trigger: GAGAGGTGTCTTCTGTGTCGTTGAGATATTCCACAAGTACGCCATTGAGGATGGCGGCAACCAGGCAACACT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 72 bp | ATTTCTTGGCAGGCTGTGGGTCTTAATGTCTTCACATaGGCTCACCATAGGCTCATCACCTACCTCACCTTC | + |
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Preference number: 6 (lower is better) Translates to: ISWQAVGLNVFT*AHHRLITYLTF Trigger: GAAGGTGAGGTAGGTGATGAGCCTATGGTGAGCCCATGTGAAGACATTAAGACCCACAGCCTGCCAAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 72 bp | GAGCATCTTCTTTTGGCTGTTGGTTCTCAGGGTCATTaGGCTCAGACACATTTCTTGGCAGGCTGTGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: EHLLLAVGSQGH*AQTHFLAGCGS Trigger: AGACCCACAGCCTGCCAAGAAATGTGTCTGAGCCAAATGACCCTGAGAACCAACAGCCAAAAGAAGATGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS TCA 72 bp | TGGGCTGACCTGATGATGCCATTTCTGATGGAAATATaGGCCTTTCTTGAGTTGGCCCAACCCCTACTACCT | + |
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Preference number: 6 (lower is better) Translates to: WADLMMPFLMEI*AFLELAQPLLP Trigger: AGGTAGTAGGGGTTGGGCCAACTCAAGAAAGGCTCATATTTCCATCAGAAATGGCATCATCAGGTCAGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 72 bp | TTGGTTCTCAGGGTCATTTGGCTCAGACACATTTCTTaGCAGGCTGTGGGTCTTAATGTCTTCACATGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LVLRVIWLRHIS*QAVGLNVFTWA Trigger: AGCCCATGTGAAGACATTAAGACCCACAGCCTGCCAAGAAATGTGTCTGAGCCAAATGACCCTGAGAACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 72 bp | AGCATCTTCTTTTGGCTGTTGGTTCTCAGGGTCATTTaGCTCAGACACATTTCTTGGCAGGCTGTGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: SIFFWLLVLRVI*LRHISWQAVGL Trigger: AAGACCCACAGCCTGCCAAGAAATGTGTCTGAGCCAAATGACCCTGAGAACCAACAGCCAAAAGAAGATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 72 bp | CTTGTATTGTGTTCTCTTTCTTGTGCTGGCAATCCGTaGCTCTCAGCTACTTTAGCATCAGCTTTGGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LVLCSLSCAGNP*LSATLASALGS Trigger: GGAGCCCAAAGCTGATGCTAAAGTAGCTGAGAGCCACGGATTGCCAGCACAAGAAAGAGAACACAATACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 72 bp | AGACTGGTCCCTTGTATTGTGTTCTCTTTCTTGTGCTaGCAATCCGTGGCTCTCAGCTACTTTAGCATCAGC | + |
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Preference number: 6 (lower is better) Translates to: RLVPCIVFSFLC*QSVALSYFSIS Trigger: GCTGATGCTAAAGTAGCTGAGAGCCACGGATTGCCAGCACAAGAAAGAGAACACAATACAAGGGACCAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 72 bp | GCCCAACCCCTACTACCTGCTGAATGTTTCCACCAATaGCCCCCAAATCCACAGCATCTATCTTCTCTGATT | + |
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Preference number: 6 (lower is better) Translates to: AQPLLPAECFHQ*PPNPQHLSSLI Trigger: AATCAGAGAAGATAGATGCTGTGGATTTGGGGGCAATTGGTGGAAACATTCAGCAGGTAGTAGGGGTTGGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 72 bp | CTGCTTCTGGGGATCTGGGTTGTTAGTGTGACTTTCTaGCTTAGCATCTCCATGGTGGTCTATCTGACTCTG | + |
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Preference number: 6 (lower is better) Translates to: LLLGIWVVSVTF*LSISMVVYLTL Trigger: CAGAGTCAGATAGACCACCATGGAGATGCTAAGCAAGAAAGTCACACTAACAACCCAGATCCCCAGAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 90 bp | TGCTGGTACATTTTGTGCGACTTCCTGAGCATCTTCTTTTGGCTGTaGGTTCTCAGGGTCATTTGGCTCAGACACATTTCTTGGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: CWYILCDFLSIFFWL*VLRVIWLRHISWQA Trigger: AGCCTGCCAAGAAATGTGTCTGAGCCAAATGACCCTGAGAACCAACAGCCAAAAGAAGATGCTCAGGAAGTCGCACAAAATGTACCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 90 bp | TCAGCTATCTCTGAGCTGCTCTTACCTACCTCTGGAGCCAGGCTGTaGGGAATTTCACAAAAGCCCTCATCACTCTGTGTAAGTGATAAC | + |
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Preference number: 6 (lower is better) Translates to: SAISELLLPTSGARL*GISQKPSSLCVSDN Trigger: GTTATCACTTACACAGAGTGATGAGGGCTTTTGTGAAATTCCCAACAGCCTGGCTCCAGAGGTAGGTAAGAGCAGCTCAGAGATAGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 90 bp | ATGTTTCTGAAACATTTCTGCTCCGGCTTTGAACAGACTGGTCCCTaGTATTGTGTTCTCTTTCTTGTGCTGGCAATCCGTGGCTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: MFLKHFCSGFEQTGP*YCVLFLVLAIRGSQ Trigger: CTGAGAGCCACGGATTGCCAGCACAAGAAAGAGAACACAATACAAGGGACCAGTCTGTTCAAAGCCGGAGCAGAAATGTTTCAGAAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS GCA 72 bp | AACAGACTGGTCCCTTGTATTGTGTTCTCTTTCTTGTaGTGGCAATCCGTGGCTCTCAGCTACTTTAGCATC | + |
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Preference number: 6 (lower is better) Translates to: NRLVPCIVFSFL*WQSVALSYFSI Trigger: GATGCTAAAGTAGCTGAGAGCCACGGATTGCCAGCACAAGAAAGAGAACACAATACAAGGGACCAGTCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 72 bp | AAGGTTCAACTTTCTCTCCACAGCATGAAAGACATGTaGCTGAAGGAAGTCCCCAATTTCTCCCTCAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: KVQLSLHSMKDM*LKEVPNFSLKE Trigger: CTCCTTGAGGGAGAAATTGGGGACTTCCTTCAGCCACATGTCTTTCATGCTGTGGAGAGAAAGTTGAACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 72 bp | GGATGGTTTACTTCTTTCTCTTGGGATCTCCTGTGTTaGACTGGTGCTCTGTTTGGGTACTTCGACTACTGT | + |
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Preference number: 6 (lower is better) Translates to: GWFTSFSWDLLC*TGALFGYFDYC Trigger: ACAGTAGTCGAAGTACCCAAACAGAGCACCAGTCCAACACAGGAGATCCCAAGAGAAAGAAGTAAACCATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 72 bp | CTGGTACATTTTGTGCGACTTCCTGAGCATCTTCTTTaGGCTGTTGGTTCTCAGGGTCATTTGGCTCAGACA | + |
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Preference number: 6 (lower is better) Translates to: LVHFVRLPEHLL*AVGSQGHLAQT Trigger: TGTCTGAGCCAAATGACCCTGAGAACCAACAGCCAAAAGAAGATGCTCAGGAAGTCGCACAAAATGTACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 72 bp | TGGATGGTTTACTTCTTTCTCTTGGGATCTCCTGTGTaGGACTGGTGCTCTGTTTGGGTACTTCGACTACTG | + |
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Preference number: 6 (lower is better) Translates to: WMVYFFLLGSPV*DWCSVWVLRLL Trigger: CAGTAGTCGAAGTACCCAAACAGAGCACCAGTCCAACACAGGAGATCCCAAGAGAAAGAAGTAAACCATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 72 bp | GGCAATCCGTGGCTCTCAGCTACTTTAGCATCAGCTTaGGGCTCCTCTAAATTTGTTTCAGGTGGTATTCTG | + |
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Preference number: 6 (lower is better) Translates to: GNPWLSATLASA*GSSKFVSGGIL Trigger: CAGAATACCACCTGAAACAAATTTAGAGGAGCCCAAAGCTGATGCTAAAGTAGCTGAGAGCCACGGATTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 72 bp | TTGAACAGACTGGTCCCTTGTATTGTGTTCTCTTTCTaGTGCTGGCAATCCGTGGCTCTCAGCTACTTTAGC | + |
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Preference number: 6 (lower is better) Translates to: LNRLVPCIVFSF*CWQSVALSYFS Trigger: GCTAAAGTAGCTGAGAGCCACGGATTGCCAGCACAAGAAAGAGAACACAATACAAGGGACCAGTCTGTTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 90 bp | TTAGCCTCCTGGATGGTTTACTTCTTTCTCTTGGGATCTCCTGTGTaGGACTGGTGCTCTGTTTGGGTACTTCGACTACTGTATTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LASWMVYFFLLGSPV*DWCSVWVLRLLYFS Trigger: AGAGAAATACAGTAGTCGAAGTACCCAAACAGAGCACCAGTCCAACACAGGAGATCCCAAGAGAAAGAAGTAAACCATCCAGGAGGCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS TCA 72 bp | TGCAGCAGAGTCCTTTTTGGCATCGTTTTCCCTCCATaGTCCTGGAAATTCTTGACACTTCTCATCCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: CSRVLFGIVFPP*SWKFLTLLILC Trigger: ACACAGGATGAGAAGTGTCAAGAATTTCCAGGATCATGGAGGGAAAACGATGCCAAAAAGGACTCTGCTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 90 bp | CTGGAAATTCTTGACACTTCTCATCCTGTGTTTCAGCATCTGCTGTaGGGGATAGAGTTATTCTTTCATGTTCTTTCCACTCCCCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LEILDTSHPVFQHLL*GIELFFHVLSTPPP Trigger: AGGAGGGGGAGTGGAAAGAACATGAAAGAATAACTCTATCCCCAACAGCAGATGCTGAAACACAGGATGAGAAGTGTCAAGAATTTCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS TCA 72 bp | TCATATTCAGTTGCTGGTACATTTTGTGCGACTTCCTaGGCATCTTCTTTTGGCTGTTGGTTCTCAGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SYSVAGTFCATS*ASSFGCWFSGS Trigger: TGACCCTGAGAACCAACAGCCAAAAGAAGATGCTCAGGAAGTCGCACAAAATGTACCAGCAACTGAATATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS TCA 72 bp | TCAGGTGGTATTCTGCCAGCATCCTTTCCAGTTTCTTaGGCCTCAGATAGTTTAGTATCATCCATAGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: SGGILPASFPVS*ASDSLVSSIGS Trigger: TGAGCCTATGGATGATACTAAACTATCTGAGGCTCAAGAAACTGGAAAGGATGCTGGCAGAATACCACCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 72 bp | TCATATGGTCACTTATCTTGGTGTCACTTAGCCTCCTaGATGGTTTACTTCTTTCTCTTGGGATCTCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SYGHLSWCHLAS*MVYFFLLGSPV Trigger: CACAGGAGATCCCAAGAGAAAGAAGTAAACCATCCAGGAGGCTAAGTGACACCAAGATAAGTGACCATATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 72 bp | ATTTTGTGCGACTTCCTGAGCATCTTCTTTTGGCTGTaGGTTCTCAGGGTCATTTGGCTCAGACACATTTCT | + |
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Preference number: 6 (lower is better) Translates to: ILCDFLSIFFWL*VLRVIWLRHIS Trigger: AGAAATGTGTCTGAGCCAAATGACCCTGAGAACCAACAGCCAAAAGAAGATGCTCAGGAAGTCGCACAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 72 bp | TCTCTTGGGATCTCCTGTGTTGGACTGGTGCTCTGTTaGGGTACTTCGACTACTGTATTTCTCTTAAATTGG | + |
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Preference number: 6 (lower is better) Translates to: SLGISCVGLVLC*GTSTTVFLLNW Trigger: CCAATTTAAGAGAAATACAGTAGTCGAAGTACCCAAACAGAGCACCAGTCCAACACAGGAGATCCCAAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 72 bp | GGAGATTCTGATTTCCTTCTTCAGAACTTGGATCTTTaGCAGCAGAGTCCTTTTTGGCATCGTTTTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GDSDFLLQNLDL*QQSPFWHRFPS Trigger: GGAGGGAAAACGATGCCAAAAAGGACTCTGCTGCAAAAGATCCAAGTTCTGAAGAAGGAAATCAGAATCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS GCA 72 bp | TTGGACTCCATCATATTCAGTTGCTGGTACATTTTGTaGGACTTCCTGAGCATCTTCTTTTGGCTGTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: LDSIIFSCWYIL*DFLSIFFWLLV Trigger: AACCAACAGCCAAAAGAAGATGCTCAGGAAGTCGCACAAAATGTACCAGCAACTGAATATGATGGAGTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 90 bp | TTACTTCTTTCTCTTGGGATCTCCTGTGTTGGACTGGTGCTCTGTTaGGGTACTTCGACTACTGTATTTCTCTTAAATTGGACTCCATCA | + |
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Preference number: 6 (lower is better) Translates to: LLLSLGISCVGLVLC*GTSTTVFLLNWTPS Trigger: TGATGGAGTCCAATTTAAGAGAAATACAGTAGTCGAAGTACCCAAACAGAGCACCAGTCCAACACAGGAGATCCCAAGAGAAAGAAGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 72 bp | AAATTGGACTCCATCATATTCAGTTGCTGGTACATTTaGTGCGACTTCCTGAGCATCTTCTTTTGGCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: KLDSIIFSCWYI*CDFLSIFFWLL Trigger: CAACAGCCAAAAGAAGATGCTCAGGAAGTCGCACAAAATGTACCAGCAACTGAATATGATGGAGTCCAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 72 bp | CTTGACACTTCTCATCCTGTGTTTCAGCATCTGCTGTaGGGGATAGAGTTATTCTTTCATGTTCTTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: LDTSHPVFQHLL*GIELFFHVLST Trigger: AGTGGAAAGAACATGAAAGAATAACTCTATCCCCAACAGCAGATGCTGAAACACAGGATGAGAAGTGTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 90 bp | ATTTCTCTTAAATTGGACTCCATCATATTCAGTTGCTGGTACATTTaGTGCGACTTCCTGAGCATCTTCTTTTGGCTGTTGGTTCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: ISLKLDSIIFSCWYI*CDFLSIFFWLLVLR Trigger: CCTGAGAACCAACAGCCAAAAGAAGATGCTCAGGAAGTCGCACAAAATGTACCAGCAACTGAATATGATGGAGTCCAATTTAAGAGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 90 bp | ACTGGTGCTCTGTTTGGGTACTTCGACTACTGTATTTCTCTTAAATaGGACTCCATCATATTCAGTTGCTGGTACATTTTGTGCGACTTC | + |
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Preference number: 6 (lower is better) Translates to: TGALFGYFDYCISLK*DSIIFSCWYILCDF Trigger: GAAGTCGCACAAAATGTACCAGCAACTGAATATGATGGAGTCCAATTTAAGAGAAATACAGTAGTCGAAGTACCCAAACAGAGCACCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 90 bp | GACCTTTCTCTTGTTTCCAATGTCTCTTCAGCTGCAGGGCTGTTTTaGTTGATTTCAAATGCATATACTGTGTCTTCCTCACTGTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: DLSLVSNVSSAAGLF*LISNAYTVSSSLCL Trigger: AAGACACAGTGAGGAAGACACAGTATATGCATTTGAAATCAACAAAAACAGCCCTGCAGCTGAAGAGACATTGGAAACAAGAGAAAGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS TCA 72 bp | CCTGAGACAGAATCTTCCTTAATTTCAGGGAGATTCTaGTTTCCTTCTTCAGAACTTGGATCTTTTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PETESSLISGRF*FPSSELGSFAA Trigger: TGCTGCAAAAGATCCAAGTTCTGAAGAAGGAAATCAGAATCTCCCTGAAATTAAGGAAGATTCTGTCTCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 72 bp | AATTTCAGGGAGATTCTGATTTCCTTCTTCAGAACTTaGATCTTTTGCAGCAGAGTCCTTTTTGGCATCGTT | + |
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Preference number: 6 (lower is better) Translates to: NFREILISFFRT*IFCSRVLFGIV Trigger: AACGATGCCAAAAAGGACTCTGCTGCAAAAGATCCAAGTTCTGAAGAAGGAAATCAGAATCTCCCTGAAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 72 bp | CTTGTTTCCAATGTCTCTTCAGCTGCAGGGCTGTTTTaGTTGATTTCAAATGCATATACTGTGTCTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: LVSNVSSAAGLF*LISNAYTVSSS Trigger: TGAGGAAGACACAGTATATGCATTTGAAATCAACAAAAACAGCCCTGCAGCTGAAGAGACATTGGAAACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 72 bp | ATTTCTCTTAAATTGGACTCCATCATATTCAGTTGCTaGTACATTTTGTGCGACTTCCTGAGCATCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: ISLKLDSIIFSC*YILCDFLSIFF Trigger: AAAGAAGATGCTCAGGAAGTCGCACAAAATGTACCAGCAACTGAATATGATGGAGTCCAATTTAAGAGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CAA 72 bp | CTGTTTGGGTACTTCGACTACTGTATTTCTCTTAAATaGGACTCCATCATATTCAGTTGCTGGTACATTTTG | + |
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Preference number: 6 (lower is better) Translates to: LFGYFDYCISLK*DSIIFSCWYIL Trigger: CAAAATGTACCAGCAACTGAATATGATGGAGTCCAATTTAAGAGAAATACAGTAGTCGAAGTACCCAAACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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| CDS CCA 72 bp | TGTTTGGGTACTTCGACTACTGTATTTCTCTTAAATTaGACTCCATCATATTCAGTTGCTGGTACATTTTGT | + |
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Preference number: 6 (lower is better) Translates to: CLGTSTTVFLLN*TPSYSVAGTFC Trigger: ACAAAATGTACCAGCAACTGAATATGATGGAGTCCAATTTAAGAGAAATACAGTAGTCGAAGTACCCAAACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029516.3 |
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