Pregenerated sensors for TCFL5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038932Ensembl transcript IDs: ENSMUST00000037877.11, ENSMUST00000161425.3
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGCGCCTCCTATCTCGTTCCATTCGGTTATGCCTCTCCCGACGCTaGGACCTTCCTCCCTGGGGTCCGCTCTGCGTCTGCTCCCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: LRLLSRSIRLCLSRR*DLPPWGPLCVCSPR Trigger: CCTGGGGGAGCAGACGCAGAGCGGACCCCAGGGAGGAAGGTCTCAGCGTCGGGAGAGGCATAACCGAATGGAACGAGATAGGAGGCGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
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| 3UTR CCA 90 bp | CTTTCACGAAATGTGCTCTCAACGTCCTTACTGGAGTCCCACAACTaGAGCCGCATCCCTCGAGAGGACTCAGAGCTGAACTCCGGGATG | + |
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Preference number: 1 (lower is better) Translates to: LSRNVLSTSLLESHN*SRIPREDSELNSGM Trigger: CATCCCGGAGTTCAGCTCTGAGTCCTCTCGAGGGATGCGGCTCCAGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACATTTCGTGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| 3UTR CCA 90 bp | TGTTTAGATAAATACTTTCACGAAATGTGCTCTCAACGTCCTTACTaGAGTCCCACAACTGGAGCCGCATCCCTCGAGAGGACTCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: CLDKYFHEMCSQRPY*SPTTGAASLERTQS Trigger: GCTCTGAGTCCTCTCGAGGGATGCGGCTCCAGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACATTTCGTGAAAGTATTTATCTAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| 3UTR GCA 90 bp | ATGCTGTGGTCCACTGAAGGGTTGTTGCTTTATCTGTCTCCGCATTaGAGAATGGAACTAAAAGATTCAGCTCATCACAGCAAATGCGGA | + |
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Preference number: 1 (lower is better) Translates to: MLWSTEGLLLYLSPH*RMELKDSAHHSKCG Trigger: TCCGCATTTGCTGTGATGAGCTGAATCTTTTAGTTCCATTCTGCAATGCGGAGACAGATAAAGCAACAACCCTTCAGTGGACCACAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
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| 3UTR GCA 90 bp | CTTTTTAAGAGAGTCCCCATGTCTTTCCTGAATGTACTTCAGGAATaGTGTGGTCCACTGAAGGGTTGTTGCTTTATCTGTCTCCGCATT | + |
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Preference number: 1 (lower is better) Translates to: LFKRVPMSFLNVLQE*CGPLKGCCFICLRI Trigger: AATGCGGAGACAGATAAAGCAACAACCCTTCAGTGGACCACAGCATTCCTGAAGTACATTCAGGAAAGACATGGGGACTCTCTTAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
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| 3UTR CCA 90 bp | ATACAGTTTATTACACATAAAGCACTGCCTCACAATATGGAAATGTaGGCATTAAAGCAATGTACTGCGAAAATGTTTATGGGCAAAAGG | + |
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Preference number: 1 (lower is better) Translates to: IQFITHKALPHNMEM*ALKQCTAKMFMGKR Trigger: CCTTTTGCCCATAAACATTTTCGCAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGTAATAAACTGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| 3UTR CAA 90 bp | GAGACCTTCCTCCCTGGGGTCCGCTCTGCGTCTGCTCCCCCAGGTTaGACTGTGAGGACTCTGAAGACTGCCAGGTGCCCTGTGATGTTG | + |
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Preference number: 2 (lower is better) Translates to: ETFLPGVRSASAPPG*TVRTLKTARCPVML Trigger: CAACATCACAGGGCACCTGGCAGTCTTCAGAGTCCTCACAGTCAAACCTGGGGGAGCAGACGCAGAGCGGACCCCAGGGAGGAAGGTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
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| 3UTR-3UTR GCA 90 bp | AAATGCGGATTCTGCGCCTCCTATCTCGTTCCATTCGGTTATGCCTCTCCCGACCTGAAGACTGCCAGGTaGCCTGTGATGTTGAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: KCGFCASYLVPFGYASPDLKTAR*PVMLKS Trigger: GCTCTTCAACATCACAGGGCACCTGGCAGTCTTCAG...GTCGGGAGAGGCATAACCGAATGGAACGAGATAGGAGGCGCAGAATCCGCATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
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| 3UTR CAA 90 bp | GTCTTTCCTGAATGTACTTCAGGAATGCTGTGGTCCACTGAAGGGTaGTTGCTTTATCTGTCTCCGCATTGCAGAATGGAACTAAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: VFPECTSGMLWSTEG*LLYLSPHCRMELKD Trigger: ATCTTTTAGTTCCATTCTGCAATGCGGAGACAGATAAAGCAACAACCCTTCAGTGGACCACAGCATTCCTGAAGTACATTCAGGAAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
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| 3UTR CAA 90 bp | TTTCCTGAATGTACTTCAGGAATGCTGTGGTCCACTGAAGGGTTGTaGCTTTATCTGTCTCCGCATTGCAGAATGGAACTAAAAGATTCA | + |
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Preference number: 2 (lower is better) Translates to: FPECTSGMLWSTEGL*LYLSPHCRMELKDS Trigger: TGAATCTTTTAGTTCCATTCTGCAATGCGGAGACAGATAAAGCAACAACCCTTCAGTGGACCACAGCATTCCTGAAGTACATTCAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
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| 3UTR TCA 72 bp | CTATCTCGTTCCATTCGGTTATGCCTCTCCCGACGCTaGGACCTTCCTCCCTGGGGTCCGCTCTGCGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: LSRSIRLCLSRR*DLPPWGPLCVC Trigger: GCAGACGCAGAGCGGACCCCAGGGAGGAAGGTCTCAGCGTCGGGAGAGGCATAACCGAATGGAACGAGATAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
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| 3UTR CCA 72 bp | AATGTGCTCTCAACGTCCTTACTGGAGTCCCACAACTaGAGCCGCATCCCTCGAGAGGACTCAGAGCTGAAC | + |
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Preference number: 3 (lower is better) Translates to: NVLSTSLLESHN*SRIPREDSELN Trigger: GTTCAGCTCTGAGTCCTCTCGAGGGATGCGGCTCCAGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| 3UTR CCA 72 bp | AAATACTTTCACGAAATGTGCTCTCAACGTCCTTACTaGAGTCCCACAACTGGAGCCGCATCCCTCGAGAGG | + |
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Preference number: 3 (lower is better) Translates to: KYFHEMCSQRPY*SPTTGAASLER Trigger: CCTCTCGAGGGATGCGGCTCCAGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACATTTCGTGAAAGTATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| 3UTR GCA 72 bp | AGAGTCCCCATGTCTTTCCTGAATGTACTTCAGGAATaGTGTGGTCCACTGAAGGGTTGTTGCTTTATCTGT | + |
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Preference number: 3 (lower is better) Translates to: RVPMSFLNVLQE*CGPLKGCCFIC Trigger: ACAGATAAAGCAACAACCCTTCAGTGGACCACAGCATTCCTGAAGTACATTCAGGAAAGACATGGGGACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
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| 3UTR GCA 72 bp | TCCACTGAAGGGTTGTTGCTTTATCTGTCTCCGCATTaGAGAATGGAACTAAAAGATTCAGCTCATCACAGC | + |
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Preference number: 3 (lower is better) Translates to: STEGLLLYLSPH*RMELKDSAHHS Trigger: GCTGTGATGAGCTGAATCTTTTAGTTCCATTCTGCAATGCGGAGACAGATAAAGCAACAACCCTTCAGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
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| 3UTR CCA 72 bp | ATTACACATAAAGCACTGCCTCACAATATGGAAATGTaGGCATTAAAGCAATGTACTGCGAAAATGTTTATG | + |
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Preference number: 3 (lower is better) Translates to: ITHKALPHNMEM*ALKQCTAKMFM Trigger: CATAAACATTTTCGCAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR CCA 90 bp | TGGGGTCCGCTCTGCGTCTGCTCCCCCAGGTTTGACTGTGAGGACTCTGAAGACTCCTGGAAGTCGACGTaGCCCAGGCACGGCGCGTCG | + |
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Preference number: 4 (lower is better) Translates to: WGPLCVCSPRFDCEDSEDSWKST*PRHGAS Trigger: CGACGCGCCGTGCCTGGGCCACGTCGACTTCCAGGA...GTCTTCAGAGTCCTCACAGTCAAACCTGGGGGAGCAGACGCAGAGCGGACCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
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| 3UTR CAA 72 bp | CTCCCTGGGGTCCGCTCTGCGTCTGCTCCCCCAGGTTaGACTGTGAGGACTCTGAAGACTGCCAGGTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LPGVRSASAPPG*TVRTLKTARCP Trigger: AGGGCACCTGGCAGTCTTCAGAGTCCTCACAGTCAAACCTGGGGGAGCAGACGCAGAGCGGACCCCAGGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
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| CDS-3UTR GCA 90 bp | ATGTGCATGATGCCGCAGGAACGGCGGTTCTCTCCCAGGTCCTGGGTCAGTCCATCTCCATGGCAGGGCTaGTCTGCAGGCTGCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: MCMMPQERRFSPRSWVSPSPWQG*SAGCPV Trigger: CACAGGGCAGCCTGCAGAGCAGCCCTGCCATGGAGA...TGGACTGACCCAGGACCTGGGAGAGAACCGCCGTTCCTGCGGCATCATGCACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR TCA 90 bp | ATGTGCTCTCAACGTCCTTACTGGAGTCCCACAACTGGAGCCGCATCCCTCGAGCGGCCGGCATACTGTTaGAGCGGTCCTCCAGACGGA | + |
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Preference number: 4 (lower is better) Translates to: MCSQRPYWSPTTGAASLERPAYC*SGPPDG Trigger: TCCGTCTGGAGGACCGCTTCAACAGTATGCCGGCCG...CTCGAGGGATGCGGCTCCAGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR CCA 90 bp | CGAAATGTGCTCTCAACGTCCTTACTGGAGTCCCACAACTGGAGCCGCATCCCTGCGTCTGTGCAAGGCTaGCATTCCCACCAGTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: RNVLSTSLLESHNWSRIPASVQG*HSHQWS Trigger: GCTCCACTGGTGGGAATGCCAGCCTTGCACAGACGC...AGGGATGCGGCTCCAGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACATTTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR CCA 90 bp | ATGTGCATGATGCCGCAGGAACGGCGGTTCTCTCCCAGGTCCTGGGTCAGTCCAGGCAGTCCAATATCCTaGTGCTTGGCAGCTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: MCMMPQERRFSPRSWVSPGSPIS*CLAASS Trigger: ACTGGAAGCTGCCAAGCACCAGGATATTGGACTGCC...TGGACTGACCCAGGACCTGGGAGAGAACCGCCGTTCCTGCGGCATCATGCACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR CCA 90 bp | CTTCCTCCCTGGGGTCCGCTCTGCGTCTGCTCCCCCAGGTTTGACTGTGAGGACCTCCTGTCTGTTTGGTaGACTCAATCTCTTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LPPWGPLCVCSPRFDCEDLLSVW*TQSLAG Trigger: ACCAGCAAGAGATTGAGTCCACCAAACAGACAGGAG...GTCCTCACAGTCAAACCTGGGGGAGCAGACGCAGAGCGGACCCCAGGGAGGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
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| CDS-3UTR GCA 90 bp | TACTTTCACGAAATGTGCTCTCAACGTCCTTACTGGAGTCCCACAACTGGAGCCCCCTGGGGTCCGCTCTaGGTCTGCTCCCCCAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: YFHEMCSQRPYWSPTTGAPWGPL*VCSPRF Trigger: AAACCTGGGGGAGCAGACGCAGAGCGGACCCCAGGG...GGCTCCAGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACATTTCGTGAAAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR GCA 90 bp | TACTTTCACGAAATGTGCTCTCAACGTCCTTACTGGAGTCCCACAACTGGAGCCATGGCAGGGCTGCTCTaGAGGCTGCCCTGTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: YFHEMCSQRPYWSPTTGAMAGLL*RLPCAG Trigger: CCCTGCACAGGGCAGCCTGCAGAGCAGCCCTGCCAT...GGCTCCAGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACATTTCGTGAAAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR GCA 90 bp | CGAAATGTGCTCTCAACGTCCTTACTGGAGTCCCACAACTGGAGCCGCATCCCTAGAACTCTGCGTCTGTaGAAGGCTGGCATTCCCACC | + |
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Preference number: 4 (lower is better) Translates to: RNVLSTSLLESHNWSRIPRTLRL*KAGIPT Trigger: GGTGGGAATGCCAGCCTTGCACAGACGCAGAGTTCT...AGGGATGCGGCTCCAGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACATTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR GCA 90 bp | ATGTGCTCTCAACGTCCTTACTGGAGTCCCACAACTGGAGCCGCATCCCTCGAGCTGAAGACTGCCAGGTaGCCTGTGATGTTGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: MCSQRPYWSPTTGAASLELKTAR*PVMLKS Trigger: GCTCTTCAACATCACAGGGCACCTGGCAGTCTTCAG...CTCGAGGGATGCGGCTCCAGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR CCA 90 bp | ATGTGCATGATGCCGCAGGAACGGCGGTTCTCTCCCAGGTCCTGGGTCAGTCCAACTTCAGGAATGCTGTaGTCCACTGAAGGGTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: MCMMPQERRFSPRSWVSPTSGML*STEGLL Trigger: CAACAACCCTTCAGTGGACCACAGCATTCCTGAAGT...TGGACTGACCCAGGACCTGGGAGAGAACCGCCGTTCCTGCGGCATCATGCACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR GCA 90 bp | TCGTTCCATTCGGTTATGCCTCTCCCGACGCTGAGACCTTCCTCCCTGGGGTCCAGTCCAATATCCTGGTaGTTGGCAGCTTCCAGTATA | + |
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Preference number: 4 (lower is better) Translates to: SFHSVMPLPTLRPSSLGSSPISW*LAASSI Trigger: TATACTGGAAGCTGCCAAGCACCAGGATATTGGACT...GGACCCCAGGGAGGAAGGTCTCAGCGTCGGGAGAGGCATAACCGAATGGAACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
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| CDS-3UTR GCA 90 bp | CGAAATGTGCTCTCAACGTCCTTACTGGAGTCCCACAACTGGAGCCGCATCCCTGAGGACTCTGAAGACTaGCAGGTGCCCTGTGATGTT | + |
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Preference number: 4 (lower is better) Translates to: RNVLSTSLLESHNWSRIPEDSED*QVPCDV Trigger: AACATCACAGGGCACCTGGCAGTCTTCAGAGTCCTC...AGGGATGCGGCTCCAGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACATTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR GCA 90 bp | ATGTGCATGATGCCGCAGGAACGGCGGTTCTCTCCCAGGTCCTGGGTCAGTCCAAATGTACTTCAGGAATaGTGTGGTCCACTGAAGGGT | + |
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Preference number: 4 (lower is better) Translates to: MCMMPQERRFSPRSWVSPNVLQE*CGPLKG Trigger: ACCCTTCAGTGGACCACAGCATTCCTGAAGTACATT...TGGACTGACCCAGGACCTGGGAGAGAACCGCCGTTCCTGCGGCATCATGCACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR TCA 90 bp | AATGTACTTCAGGAATGCTGTGGTCCACTGAAGGGTTGTTGCTTTATCTGTCTCTCAGGTCGGTGGTCGTaGAGCTCAGCCCCGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: NVLQECCGPLKGCCFICLSGRWS*SSAPAL Trigger: GAGAGCCGGGGCTGAGCTTCACGACCACCGACCTGA...GAGACAGATAAAGCAACAACCCTTCAGTGGACCACAGCATTCCTGAAGTACATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
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| CDS-3UTR GCA 90 bp | CGAAATGTGCTCTCAACGTCCTTACTGGAGTCCCACAACTGGAGCCGCATCCCTAGCAAATGCGGATTCTaGGCCTCCTATCTCGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: RNVLSTSLLESHNWSRIPSKCGF*ASYLVP Trigger: TGGAACGAGATAGGAGGCGCAGAATCCGCATTTGCT...AGGGATGCGGCTCCAGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACATTTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR GCA 90 bp | ATGTGCATGATGCCGCAGGAACGGCGGTTCTCTCCCAGGTCCTGGGTCAGTCCATCAGCTTTAGCCTTCTaGCAGTTTTACCGCAAAACA | + |
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Preference number: 4 (lower is better) Translates to: MCMMPQERRFSPRSWVSPSALAF*QFYRKT Trigger: TGTTTTGCGGTAAAACTGGCAGAAGGCTAAAGCTGA...TGGACTGACCCAGGACCTGGGAGAGAACCGCCGTTCCTGCGGCATCATGCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR CCA 90 bp | CATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTGCGTCCTGGAAGTCGACGTaGCCCAGGCACGGCGCGTCG | + |
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Preference number: 4 (lower is better) Translates to: HKALPHNMEMWALKQCTASWKST*PRHGAS Trigger: CGACGCGCCGTGCCTGGGCCACGTCGACTTCCAGGA...CGCAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR CCA 90 bp | ATGTGCTCTCAACGTCCTTACTGGAGTCCCACAACTGGAGCCGCATCCCTCGAGGGCACTTGTAAACAGTaGGTAGGTGAACTGCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: MCSQRPYWSPTTGAASLEGTCKQ*VGELQS Trigger: GCTTTGCAGTTCACCTACCCACTGTTTACAAGTGCC...CTCGAGGGATGCGGCTCCAGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR TCA 90 bp | GATAAATACTTTCACGAAATGTGCTCTCAACGTCCTTACTGGAGTCCCACAACTTCAGGTCGGTGGTCGTaGAGCTCAGCCCCGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: DKYFHEMCSQRPYWSPTTSGRWS*SSAPAL Trigger: GAGAGCCGGGGCTGAGCTTCACGACCACCGACCTGA...AGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACATTTCGTGAAAGTATTTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR TCA 90 bp | AATGTACTTCAGGAATGCTGTGGTCCACTGAAGGGTTGTTGCTTTATCTGTCTCCGGCCGGCATACTGTTaGAGCGGTCCTCCAGACGGA | + |
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Preference number: 4 (lower is better) Translates to: NVLQECCGPLKGCCFICLRPAYC*SGPPDG Trigger: TCCGTCTGGAGGACCGCTTCAACAGTATGCCGGCCG...GAGACAGATAAAGCAACAACCCTTCAGTGGACCACAGCATTCCTGAAGTACATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
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| CDS-3UTR TCA 90 bp | GATAAATACTTTCACGAAATGTGCTCTCAACGTCCTTACTGGAGTCCCACAACTTGCCTCTCCCGACGCTaGGACCTTCCTCCCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: DKYFHEMCSQRPYWSPTTCLSRR*DLPPWG Trigger: ACCCCAGGGAGGAAGGTCTCAGCGTCGGGAGAGGCA...AGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACATTTCGTGAAAGTATTTATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR TCA 90 bp | ATGTGCTCTCAACGTCCTTACTGGAGTCCCACAACTGGAGCCGCATCCCTCGAGAATGCTGTGGTCCACTaGAGGGTTGTTGCTTTATCT | + |
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Preference number: 4 (lower is better) Translates to: MCSQRPYWSPTTGAASLENAVVH*RVVALS Trigger: AGATAAAGCAACAACCCTTCAGTGGACCACAGCATT...CTCGAGGGATGCGGCTCCAGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR TCA 90 bp | GCGTCTGCTCCCCCAGGTTTGACTGTGAGGACTCTGAAGACTGCCAGGTGCCCTTTCCAGTATAGAGCATaGGTTACTAGAACTTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: ASAPPGLTVRTLKTARCPFQYRA*VTRTLL Trigger: CAACAAAGTTCTAGTAACTCATGCTCTATACTGGAA...AGGGCACCTGGCAGTCTTCAGAGTCCTCACAGTCAAACCTGGGGGAGCAGACGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
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| CDS-3UTR GCA 90 bp | ATTACACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTGGCTGCTCTGCAGGCTaGCCTGTGCAGGGCAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: ITHKALPHNMEMWALKQCGCSAG*PVQGRS Trigger: TGACCTGCCCTGCACAGGGCAGCCTGCAGAGCAGCC...ACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR CCA 90 bp | TTCAGCTCATCACAGCAAATGCGGATTCTGCGCCTCCTATCTCGTTCCATTCGGTACCTCCTGTCTGTTTaGTGGACTCAATCTCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: FSSSQQMRILRLLSRSIRYLLSV*WTQSLA Trigger: AGCAAGAGATTGAGTCCACCAAACAGACAGGAGGTA...CCGAATGGAACGAGATAGGAGGCGCAGAATCCGCATTTGCTGTGATGAGCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
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| CDS-3UTR CCA 90 bp | TACTTTCACGAAATGTGCTCTCAACGTCCTTACTGGAGTCCCACAACTGGAGCCTACCTCCTGTCTGTTTaGTGGACTCAATCTCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: YFHEMCSQRPYWSPTTGAYLLSV*WTQSLA Trigger: AGCAAGAGATTGAGTCCACCAAACAGACAGGAGGTA...GGCTCCAGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACATTTCGTGAAAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR CCA 90 bp | AAATACTTTCACGAAATGTGCTCTCAACGTCCTTACTGGAGTCCCACAACTGGAACGCTTGTGTCCAGCTaGCGGATTCTACTCCGATTC | + |
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Preference number: 4 (lower is better) Translates to: KYFHEMCSQRPYWSPTTGTLVSS*RILLRF Trigger: GAATCGGAGTAGAATCCGCCAGCTGGACACAAGCGT...TCCAGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACATTTCGTGAAAGTATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR CCA 90 bp | AATGTACTTCAGGAATGCTGTGGTCCACTGAAGGGTTGTTGCTTTATCTGTCTCACGCTTGTGTCCAGCTaGCGGATTCTACTCCGATTC | + |
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Preference number: 4 (lower is better) Translates to: NVLQECCGPLKGCCFICLTLVSS*RILLRF Trigger: GAATCGGAGTAGAATCCGCCAGCTGGACACAAGCGT...GAGACAGATAAAGCAACAACCCTTCAGTGGACCACAGCATTCCTGAAGTACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
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| CDS-3UTR GCA 90 bp | CCCCATGTCTTTCCTGAATGTACTTCAGGAATGCTGTGGTCCACTGAAGGGTTGACTTTAATCCAAACCTaGTCCGGCAAGGCTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PHVFPECTSGMLWSTEGLTLIQT*SGKALF Trigger: AAACAAAGCCTTGCCGGAGCAGGTTTGGATTAAAGT...CAACCCTTCAGTGGACCACAGCATTCCTGAAGTACATTCAGGAAAGACATGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
||
| CDS-3UTR TCA 90 bp | TACTTTCACGAAATGTGCTCTCAACGTCCTTACTGGAGTCCCACAACTGGAGCCTCCGATTCCTCTTATTaGTTGCTTGTTTACATAGCG | + |
|
Preference number: 4 (lower is better) Translates to: YFHEMCSQRPYWSPTTGASDSSY*LLVYIA Trigger: CGCTATGTAAACAAGCAATCAATAAGAGGAATCGGA...GGCTCCAGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACATTTCGTGAAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| 3UTR CAA 72 bp | TGTACTTCAGGAATGCTGTGGTCCACTGAAGGGTTGTaGCTTTATCTGTCTCCGCATTGCAGAATGGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: CTSGMLWSTEGL*LYLSPHCRMEL Trigger: TAGTTCCATTCTGCAATGCGGAGACAGATAAAGCAACAACCCTTCAGTGGACCACAGCATTCCTGAAGTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
||
| 3UTR CAA 72 bp | GAATGTACTTCAGGAATGCTGTGGTCCACTGAAGGGTaGTTGCTTTATCTGTCTCCGCATTGCAGAATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ECTSGMLWSTEG*LLYLSPHCRME Trigger: TTCCATTCTGCAATGCGGAGACAGATAAAGCAACAACCCTTCAGTGGACCACAGCATTCCTGAAGTACATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
||
| CDS-3UTR TCA 90 bp | CATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTGCGCCTTCACCTACATTCTaGATCTCTCCAAGGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HKALPHNMEMWALKQCTAPSPTF*ISPRAL Trigger: AAGAGCCCTTGGAGAGATTCAGAATGTAGGTGAAGG...CGCAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS-3UTR GCA 90 bp | TACTTTCACGAAATGTGCTCTCAACGTCCTTACTGGAGTCCCACAACTGGAGCCTATCTGTCTCCGCATTaGAGAATGGAACTAAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: YFHEMCSQRPYWSPTTGAYLSPH*RMELKD Trigger: ATCTTTTAGTTCCATTCTGCAATGCGGAGACAGATA...GGCTCCAGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACATTTCGTGAAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS-3UTR GCA 90 bp | GATAAATACTTTCACGAAATGTGCTCTCAACGTCCTTACTGGAGTCCCACAACTCCACTGAAGGGTTGTTaGTTTATCTGTCTCCGCATT | + |
|
Preference number: 4 (lower is better) Translates to: DKYFHEMCSQRPYWSPTTPLKGC*FICLRI Trigger: AATGCGGAGACAGATAAAGCAACAACCCTTCAGTGG...AGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACATTTCGTGAAAGTATTTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS-3UTR CCA 90 bp | ATTACACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTCTCCTGTCTGTTTGGTaGACTCAATCTCTTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ITHKALPHNMEMWALKQCLLSVW*TQSLAG Trigger: ACCAGCAAGAGATTGAGTCCACCAAACAGACAGGAG...ACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS-3UTR TCA 90 bp | ATTACACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTTCCCCATGTCTTTCCTaGATGTACTTCAGGAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: ITHKALPHNMEMWALKQCSPCLS*MYFRNA Trigger: AGCATTCCTGAAGTACATTCAGGAAAGACATGGGGA...ACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS-3UTR GCA 90 bp | ATTACACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTAGTCCAATATCCTGGTaGTTGGCAGCTTCCAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: ITHKALPHNMEMWALKQCSPISW*LAASSI Trigger: TATACTGGAAGCTGCCAAGCACCAGGATATTGGACT...ACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS-3UTR GCA 90 bp | CTTTTTAAGAGAGTCCCCATGTCTTTCCTGAATGTACTTCAGGAATGCTGTGGTGTAACAGAAAGAAAATaGTCTAGGCAGTCCAATATC | + |
|
Preference number: 4 (lower is better) Translates to: LFKRVPMSFLNVLQECCGVTERK*SRQSNI Trigger: GATATTGGACTGCCTAGAGCATTTTCTTTCTGTTAC...ACCACAGCATTCCTGAAGTACATTCAGGAAAGACATGGGGACTCTCTTAAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
||
| CDS-3UTR GCA 90 bp | TTTATTACACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAAACTTTAATCCAAACCTaGTCCGGCAAGGCTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FITHKALPHNMEMWALKQTLIQT*SGKALF Trigger: AAACAAAGCCTTGCCGGAGCAGGTTTGGATTAAAGT...TTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGTAATAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS-3UTR GCA 90 bp | TTTATTACACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAAGTAACAGAAAGAAAATaGTCTAGGCAGTCCAATATC | + |
|
Preference number: 4 (lower is better) Translates to: FITHKALPHNMEMWALKQVTERK*SRQSNI Trigger: GATATTGGACTGCCTAGAGCATTTTCTTTCTGTTAC...TTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGTAATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS GCA 90 bp | GTCCTCCAGACGGACGCGTACGGTCGGCTTGGCCCGGGCCTCCGGTaGGCCGTCGGGCCCCGCACCGCCCGCGCCTTCCTTGGCCACGCC | + |
|
Preference number: 5 (lower is better) Translates to: VLQTDAYGRLGPGLR*AVGPRTARAFLGHA Trigger: GGCGTGGCCAAGGAAGGCGCGGGCGGTGCGGGGCCCGACGGCGCACCGGAGGCCCGGGCCAAGCCGACCGTACGCGTCCGTCTGGAGGAC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
||
| CDS TCA 90 bp | CGGGCTCAGCACCGCGCGGCGCAGGCGGCTCGGCCGGCATACTGTTaGAGCGGTCCTCCAGACGGACGCGTACGGTCGGCTTGGCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RAQHRAAQAARPAYC*SGPPDGRVRSAWPG Trigger: CCCGGGCCAAGCCGACCGTACGCGTCCGTCTGGAGGACCGCTTCAACAGTATGCCGGCCGAGCCGCCTGCGCCGCGCGGTGCTGAGCCCG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
||
| CDS CCA 90 bp | CCCGCCTCGCCCAGCAGCATCATACGCAGCTCCTGGAAGTCGACGTaGCCCAGGCACGGCGCGTCGGCCGCCAGCGGCGGGCACAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: PASPSSIIRSSWKST*PRHGASAASGGHST Trigger: AGTGCTGTGCCCGCCGCTGGCGGCCGACGCGCCGTGCCTGGGCCACGTCGACTTCCAGGAGCTGCGTATGATGCTGCTGGGCGAGGCGGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
||
| CDS-3UTR CAA 90 bp | GCGTCTGCTCCCCCAGGTTTGACTGTGAGGACTCTGAAGACTGCCAGGTGCCCTACGCGTACGGTCGGCTaGGCCCGGGCCTCCGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: ASAPPGLTVRTLKTARCPTRTVG*ARASGA Trigger: CGCACCGGAGGCCCGGGCCAAGCCGACCGTACGCGT...AGGGCACCTGGCAGTCTTCAGAGTCCTCACAGTCAAACCTGGGGGAGCAGACGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
||
| CDS-3UTR CAA 90 bp | ATGTGCATGATGCCGCAGGAACGGCGGTTCTCTCCCAGGTCCTGGGTCAGTCCATCGGCCGGCATACTGTaGAAGCGGTCCTCCAGACGG | + |
|
Preference number: 5 (lower is better) Translates to: MCMMPQERRFSPRSWVSPSAGIL*KRSSRR Trigger: CCGTCTGGAGGACCGCTTCAACAGTATGCCGGCCGA...TGGACTGACCCAGGACCTGGGAGAGAACCGCCGTTCCTGCGGCATCATGCACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS-3UTR CAA 90 bp | TCCTATCTCGTTCCATTCGGTTATGCCTCTCCCGACGCTGAGACCTTCCTCCCTTCGGCCGGCATACTGTaGAAGCGGTCCTCCAGACGG | + |
|
Preference number: 5 (lower is better) Translates to: SYLVPFGYASPDAETFLPSAGIL*KRSSRR Trigger: CCGTCTGGAGGACCGCTTCAACAGTATGCCGGCCGA...AGGGAGGAAGGTCTCAGCGTCGGGAGAGGCATAACCGAATGGAACGAGATAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
||
| CDS-3UTR CAA 90 bp | GATAAATACTTTCACGAAATGTGCTCTCAACGTCCTTACTGGAGTCCCACAACTACGCGTACGGTCGGCTaGGCCCGGGCCTCCGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: DKYFHEMCSQRPYWSPTTTRTVG*ARASGA Trigger: CGCACCGGAGGCCCGGGCCAAGCCGACCGTACGCGT...AGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACATTTCGTGAAAGTATTTATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS TCA 90 bp | GACTGCCAGGTGCCCTGTGATGTTGAAGAGCCTTCACCTACATTCTaGATCTCTCCAAGGGCTCTTCGCTCCACGCTTGTGTCCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DCQVPCDVEEPSPTF*ISPRALRSTLVSSW Trigger: CCAGCTGGACACAAGCGTGGAGCGAAGAGCCCTTGGAGAGATTCAGAATGTAGGTGAAGGCTCTTCAACATCACAGGGCACCTGGCAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS-3UTR CAA 90 bp | CGAAATGTGCTCTCAACGTCCTTACTGGAGTCCCACAACTGGAGCCGCATCCCTTGCTCCGGCAAGGCTTaGTTTCTACTACCTCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RNVLSTSLLESHNWSRIPCSGKA*FLLPPV Trigger: GACAGGAGGTAGTAGAAACAAAGCCTTGCCGGAGCA...AGGGATGCGGCTCCAGTTGTGGGACTCCAGTAAGGACGTTGAGAGCACATTTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS-3UTR CAA 90 bp | CTTCCTCCCTGGGGTCCGCTCTGCGTCTGCTCCCCCAGGTTTGACTGTGAGGACCTCCGATTCCTCTTATaGATTGCTTGTTTACATAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPPWGPLCVCSPRFDCEDLRFLL*IACLHS Trigger: GCTATGTAAACAAGCAATCAATAAGAGGAATCGGAG...GTCCTCACAGTCAAACCTGGGGGAGCAGACGCAGAGCGGACCCCAGGGAGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
||
| CDS GCA 90 bp | TGGTGCTTGGCAGCTTCCAGTATAGAGCATGAGTTACTAGAACTCTaGGTCTGTGCAAGGCTGGCATTCCCACCAGTGGAGCAGGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: WCLAASSIEHELLEL*VCARLAFPPVEQAL Trigger: AAGTGCCTGCTCCACTGGTGGGAATGCCAGCCTTGCACAGACGCAGAGTTCTAGTAACTCATGCTCTATACTGGAAGCTGCCAAGCACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS-3UTR CAA 90 bp | CAAATGCGGATTCTGCGCCTCCTATCTCGTTCCATTCGGTTATGCCTCTCCCGATGCTCCGGCAAGGCTTaGTTTCTACTACCTCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QMRILRLLSRSIRLCLSRCSGKA*FLLPPV Trigger: GACAGGAGGTAGTAGAAACAAAGCCTTGCCGGAGCA...TCGGGAGAGGCATAACCGAATGGAACGAGATAGGAGGCGCAGAATCCGCATTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
||
| CDS GCA 90 bp | TCTGCTCCCCCAGGTTTGACTGTGAGGACTCTGAAGACTGCCAGGTaGCCTGTGATGTTGAAGAGCCTTCACCTACATTCTGAATCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SAPPGLTVRTLKTAR*PVMLKSLHLHSESL Trigger: GAGAGATTCAGAATGTAGGTGAAGGCTCTTCAACATCACAGGGCACCTGGCAGTCTTCAGAGTCCTCACAGTCAAACCTGGGGGAGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS CCA 90 bp | TGCAAGGCTGGCATTCCCACCAGTGGAGCAGGCACTTGTAAACAGTaGGTAGGTGAACTGCAAAGCAGTAGTGGCAGCAGCAGTTTTATT | + |
|
Preference number: 5 (lower is better) Translates to: CKAGIPTSGAGTCKQ*VGELQSSSGSSSFI Trigger: AATAAAACTGCTGCTGCCACTACTGCTTTGCAGTTCACCTACCCACTGTTTACAAGTGCCTGCTCCACTGGTGGGAATGCCAGCCTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS GCA 90 bp | TGTCTGTTTGGTGGACTCAATCTCTTGCTGGTAACAGAAAGAAAATaGTCTAGGCAGTCCAATATCCTGGTGCTTGGCAGCTTCCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: CLFGGLNLLLVTERK*SRQSNILVLGSFQY Trigger: ATACTGGAAGCTGCCAAGCACCAGGATATTGGACTGCCTAGAGCATTTTCTTTCTGTTACCAGCAAGAGATTGAGTCCACCAAACAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
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| CDS GCA 90 bp | TTGATTGCTTGTTTACATAGCGCTTCTCCCACTTTAATCCAAACCTaGTCCGGCAAGGCTTTGTTTCTACTACCTCCTGTCTGTTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LIACLHSASPTLIQT*SGKALFLLPPVCLV Trigger: CACCAAACAGACAGGAGGTAGTAGAAACAAAGCCTTGCCGGAGCAGGTTTGGATTAAAGTGGGAGAAGCGCTATGTAAACAAGCAATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
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| CDS-3UTR CAA 90 bp | CATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATGTACTGCGAGGTGCCCTGTGATGTaGAAGAGCCTTCACCTACAT | + |
|
Preference number: 5 (lower is better) Translates to: HKALPHNMEMWALKQCTARCPVM*KSLHLH Trigger: ATGTAGGTGAAGGCTCTTCAACATCACAGGGCACCT...CGCAGTACATTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS-3UTR CAA 90 bp | TTTATTACACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAATCTGCTCCCCCAGGTTaGACTGTGAGGACTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FITHKALPHNMEMWALKQSAPPG*TVRTLK Trigger: CTTCAGAGTCCTCACAGTCAAACCTGGGGGAGCAGA...TTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGTAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS-3UTR CAA 90 bp | TTTATTACACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAACCAATATCCTGGTGCTaGGCAGCTTCCAGTATAGAG | + |
|
Preference number: 5 (lower is better) Translates to: FITHKALPHNMEMWALKQPISWC*AASSIE Trigger: CTCTATACTGGAAGCTGCCAAGCACCAGGATATTGG...TTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGTAATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS-3UTR CAA 90 bp | TTTATTACACATAAAGCACTGCCTCACAATATGGAAATGTGGGCATTAAAGCAACTCCGATTCCTCTTATaGATTGCTTGTTTACATAGC | + |
|
Preference number: 5 (lower is better) Translates to: FITHKALPHNMEMWALKQLRFLL*IACLHS Trigger: GCTATGTAAACAAGCAATCAATAAGAGGAATCGGAG...TTGCTTTAATGCCCACATTTCCATATTGTGAGGCAGTGCTTTATGTGTAATAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS GCA 72 bp | ACGGACGCGTACGGTCGGCTTGGCCCGGGCCTCCGGTaGGCCGTCGGGCCCCGCACCGCCCGCGCCTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: TDAYGRLGPGLR*AVGPRTARAFL Trigger: AAGGAAGGCGCGGGCGGTGCGGGGCCCGACGGCGCACCGGAGGCCCGGGCCAAGCCGACCGTACGCGTCCGT 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
||
| CDS CAA 90 bp | GGCATACTGTTGAAGCGGTCCTCCAGACGGACGCGTACGGTCGGCTaGGCCCGGGCCTCCGGTGCGCCGTCGGGCCCCGCACCGCCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: GILLKRSSRRTRTVG*ARASGAPSGPAPPA Trigger: CGCGGGCGGTGCGGGGCCCGACGGCGCACCGGAGGCCCGGGCCAAGCCGACCGTACGCGTCCGTCTGGAGGACCGCTTCAACAGTATGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
||
| CDS CAA 90 bp | GCGGGCTCAGCACCGCGCGGCGCAGGCGGCTCGGCCGGCATACTGTaGAAGCGGTCCTCCAGACGGACGCGTACGGTCGGCTTGGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: AGSAPRGAGGSAGIL*KRSSRRTRTVGLAR Trigger: CCGGGCCAAGCCGACCGTACGCGTCCGTCTGGAGGACCGCTTCAACAGTATGCCGGCCGAGCCGCCTGCGCCGCGCGGTGCTGAGCCCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
||
| CDS CCA 72 bp | CCCAGCAGCATCATACGCAGCTCCTGGAAGTCGACGTaGCCCAGGCACGGCGCGTCGGCCGCCAGCGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: PSSIIRSSWKST*PRHGASAASGG Trigger: CCCGCCGCTGGCGGCCGACGCGCCGTGCCTGGGCCACGTCGACTTCCAGGAGCTGCGTATGATGCTGCTGGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
||
| CDS TCA 72 bp | CACCGCGCGGCGCAGGCGGCTCGGCCGGCATACTGTTaGAGCGGTCCTCCAGACGGACGCGTACGGTCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: HRAAQAARPAYC*SGPPDGRVRSA Trigger: AGCCGACCGTACGCGTCCGTCTGGAGGACCGCTTCAACAGTATGCCGGCCGAGCCGCCTGCGCCGCGCGGTG 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
||
| CDS TCA 72 bp | CTTCCGTCATCTCCACCAGGCTCAGGTCGGTGGTCGTaGAGCTCAGCCCCGGCTCTCCCAGCGCCGCGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LPSSPPGSGRWS*SSAPALPAPRP Trigger: GGGACGCGGCGCTGGGAGAGCCGGGGCTGAGCTTCACGACCACCGACCTGAGCCTGGTGGAGATGACGGAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
||
| CDS GCA 72 bp | GATCTCCATGGCAGGGCTGCTCTGCAGGCTGCCCTGTaGAGGGCAGGTCACCAGGGATTCGGGTCTAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: DLHGRAALQAAL*RAGHQGFGSSQ Trigger: CTGACTAGACCCGAATCCCTGGTGACCTGCCCTGCACAGGGCAGCCTGCAGAGCAGCCCTGCCATGGAGATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS TCA 72 bp | GCTTCCAGTATAGAGCATGAGTTACTAGAACTTTGTTaGGCGCCACGCCCGACTCGGCGGGCTCAGCACCGC | + |
|
Preference number: 6 (lower is better) Translates to: ASSIEHELLELC*APRPTRRAQHR Trigger: GCGGTGCTGAGCCCGCCGAGTCGGGCGTGGCGCTCAACAAAGTTCTAGTAACTCATGCTCTATACTGGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161425.3 |
||
| CDS GCA 72 bp | TGCTCCCCCAGGTTTGACTGTGAGGACTCTGAAGACTaGCAGGTGCCCTGTGATGTTGAAGAGCCTTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: CSPRFDCEDSED*QVPCDVEEPSP Trigger: AGGTGAAGGCTCTTCAACATCACAGGGCACCTGGCAGTCTTCAGAGTCCTCACAGTCAAACCTGGGGGAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS CCA 72 bp | GGCATTCCCACCAGTGGAGCAGGCACTTGTAAACAGTaGGTAGGTGAACTGCAAAGCAGTAGTGGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GIPTSGAGTCKQ*VGELQSSSGSS Trigger: GCTGCTGCCACTACTGCTTTGCAGTTCACCTACCCACTGTTTACAAGTGCCTGCTCCACTGGTGGGAATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS CAA 90 bp | GGAACATTCATTAATTCAGATGGATGTCGAATAAGAGTTACCAAATaGTTGAGCGCCACGCCCGACTCGGCGGGCTCAGCACCGCGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GTFINSDGCRIRVTK*LSATPDSAGSAPRG Trigger: GCCGCGCGGTGCTGAGCCCGCCGAGTCGGGCGTGGCGCTCAACAATTTGGTAACTCTTATTCGACATCCATCTGAATTAATGAATGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS CAA 72 bp | AATTCAGATGGATGTCGAATAAGAGTTACCAAATTGTaGAGCGCCACGCCCGACTCGGCGGGCTCAGCACCG | + |
|
Preference number: 6 (lower is better) Translates to: NSDGCRIRVTKL*SATPDSAGSAP Trigger: CGGTGCTGAGCCCGCCGAGTCGGGCGTGGCGCTCAACAATTTGGTAACTCTTATTCGACATCCATCTGAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
||
| CDS CAA 72 bp | CATTCTGAATCTCTCCAAGGGCTCTTCGCTCCACGCTaGTGTCCAGCTGGCGGATTCTACTCCGATTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: HSESLQGLFAPR*CPAGGFYSDSS Trigger: AGAGGAATCGGAGTAGAATCCGCCAGCTGGACACAAGCGTGGAGCGAAGAGCCCTTGGAGAGATTCAGAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
||
| CDS TCA 72 bp | GTGCCCTGTGATGTTGAAGAGCCTTCACCTACATTCTaGATCTCTCCAAGGGCTCTTCGCTCCACGCTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VPCDVEEPSPTF*ISPRALRSTLV Trigger: CACAAGCGTGGAGCGAAGAGCCCTTGGAGAGATTCAGAATGTAGGTGAAGGCTCTTCAACATCACAGGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS GCA 72 bp | GCAGCTTCCAGTATAGAGCATGAGTTACTAGAACTCTaGGTCTGTGCAAGGCTGGCATTCCCACCAGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: AASSIEHELLEL*VCARLAFPPVE Trigger: CTCCACTGGTGGGAATGCCAGCCTTGCACAGACGCAGAGTTCTAGTAACTCATGCTCTATACTGGAAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS CCA 72 bp | TCTCCAAGGGCTCTTCGCTCCACGCTTGTGTCCAGCTaGCGGATTCTACTCCGATTCCTCTTATTGATTGCT | + |
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Preference number: 6 (lower is better) Translates to: SPRALRSTLVSS*RILLRFLLLIA Trigger: AGCAATCAATAAGAGGAATCGGAGTAGAATCCGCCAGCTGGACACAAGCGTGGAGCGAAGAGCCCTTGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
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| CDS CAA 90 bp | GGTTTGACTGTGAGGACTCTGAAGACTGCCAGGTGCCCTGTGATGTaGAAGAGCCTTCACCTACATTCTGAATCTCTCCAAGGGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GLTVRTLKTARCPVM*KSLHLHSESLQGLF Trigger: GAAGAGCCCTTGGAGAGATTCAGAATGTAGGTGAAGGCTCTTCAACATCACAGGGCACCTGGCAGTCTTCAGAGTCCTCACAGTCAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS GCA 72 bp | CCAGGTTTGACTGTGAGGACTCTGAAGACTGCCAGGTaGCCTGTGATGTTGAAGAGCCTTCACCTACATTCT | + |
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Preference number: 6 (lower is better) Translates to: PGLTVRTLKTAR*PVMLKSLHLHS Trigger: AGAATGTAGGTGAAGGCTCTTCAACATCACAGGGCACCTGGCAGTCTTCAGAGTCCTCACAGTCAAACCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS CAA 72 bp | ATTAATTCAGATGGATGTCGAATAAGAGTTACCAAATaGTTGAGCGCCACGCCCGACTCGGCGGGCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: INSDGCRIRVTK*LSATPDSAGSA Trigger: TGCTGAGCCCGCCGAGTCGGGCGTGGCGCTCAACAATTTGGTAACTCTTATTCGACATCCATCTGAATTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037877.11 |
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| CDS CAA 90 bp | CATAGCGCTTCTCCCACTTTAATCCAAACCTGCTCCGGCAAGGCTTaGTTTCTACTACCTCCTGTCTGTTTGGTGGACTCAATCTCTTGC | + |
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Preference number: 6 (lower is better) Translates to: HSASPTLIQTCSGKA*FLLPPVCLVDSISC Trigger: GCAAGAGATTGAGTCCACCAAACAGACAGGAGGTAGTAGAAACAAAGCCTTGCCGGAGCAGGTTTGGATTAAAGTGGGAGAAGCGCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
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| CDS CAA 72 bp | TCTCCCACTTTAATCCAAACCTGCTCCGGCAAGGCTTaGTTTCTACTACCTCCTGTCTGTTTGGTGGACTCA | + |
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Preference number: 6 (lower is better) Translates to: SPTLIQTCSGKA*FLLPPVCLVDS Trigger: TGAGTCCACCAAACAGACAGGAGGTAGTAGAAACAAAGCCTTGCCGGAGCAGGTTTGGATTAAAGTGGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
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| CDS CAA 90 bp | TCCACGCTTGTGTCCAGCTGGCGGATTCTACTCCGATTCCTCTTATaGATTGCTTGTTTACATAGCGCTTCTCCCACTTTAATCCAAACC | + |
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Preference number: 6 (lower is better) Translates to: STLVSSWRILLRFLL*IACLHSASPTLIQT Trigger: GGTTTGGATTAAAGTGGGAGAAGCGCTATGTAAACAAGCAATCAATAAGAGGAATCGGAGTAGAATCCGCCAGCTGGACACAAGCGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
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| CDS GCA 72 bp | TGTTTACATAGCGCTTCTCCCACTTTAATCCAAACCTaGTCCGGCAAGGCTTTGTTTCTACTACCTCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: CLHSASPTLIQT*SGKALFLLPPV Trigger: GACAGGAGGTAGTAGAAACAAAGCCTTGCCGGAGCAGGTTTGGATTAAAGTGGGAGAAGCGCTATGTAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
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| CDS CCA 72 bp | CCGGCAAGGCTTTGTTTCTACTACCTCCTGTCTGTTTaGTGGACTCAATCTCTTGCTGGTAACAGAAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: PARLCFYYLLSV*WTQSLAGNRKK Trigger: TTTCTTTCTGTTACCAGCAAGAGATTGAGTCCACCAAACAGACAGGAGGTAGTAGAAACAAAGCCTTGCCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
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| CDS CAA 72 bp | GTGTCCAGCTGGCGGATTCTACTCCGATTCCTCTTATaGATTGCTTGTTTACATAGCGCTTCTCCCACTTTA | + |
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Preference number: 6 (lower is better) Translates to: VSSWRILLRFLL*IACLHSASPTL Trigger: TAAAGTGGGAGAAGCGCTATGTAAACAAGCAATCAATAAGAGGAATCGGAGTAGAATCCGCCAGCTGGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
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| CDS CAA 90 bp | GGCTTTGTTTCTACTACCTCCTGTCTGTTTGGTGGACTCAATCTCTaGCTGGTAACAGAAAGAAAATGCTCTAGGCAGTCCAATATCCTG | + |
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Preference number: 6 (lower is better) Translates to: GFVSTTSCLFGGLNL*LVTERKCSRQSNIL Trigger: CAGGATATTGGACTGCCTAGAGCATTTTCTTTCTGTTACCAGCAAGAGATTGAGTCCACCAAACAGACAGGAGGTAGTAGAAACAAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
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| CDS GCA 72 bp | CAGAAAGAAAATGCTCTAGGCAGTCCAATATCCTGGTaGTTGGCAGCTTCCAGTATAGAGCATGAGTTACTA | + |
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Preference number: 6 (lower is better) Translates to: QKENALGSPISW*LAASSIEHELL Trigger: TAGTAACTCATGCTCTATACTGGAAGCTGCCAAGCACCAGGATATTGGACTGCCTAGAGCATTTTCTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
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| CDS CAA 72 bp | AAAGAAAATGCTCTAGGCAGTCCAATATCCTGGTGCTaGGCAGCTTCCAGTATAGAGCATGAGTTACTAGAA | + |
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Preference number: 6 (lower is better) Translates to: KENALGSPISWC*AASSIEHELLE Trigger: TTCTAGTAACTCATGCTCTATACTGGAAGCTGCCAAGCACCAGGATATTGGACTGCCTAGAGCATTTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037877.11 ENSMUST00000161425.3 |
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