Pregenerated sensors for TCF7L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055799Ensembl transcript IDs: ENSMUST00000069536.12, ENSMUST00000114053.9, ENSMUST00000149446.3
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCATTGGGGCCCGAAGAGGGAGAGGGGATGATGGTGGGAAACTATaGTCACACGTGGCCACAACCTTACACTGGGCAGAGGACAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: AIGARRGRGDDGGKL*SHVATTLHWAEDRG Trigger: CCCTCTGTCCTCTGCCCAGTGTAAGGTTGTGGCCACGTGTGACCATAGTTTCCCACCATCATCCCCTCTCCCTCTTCGGGCCCCAATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| 3UTR CCA 90 bp | CCCGAAGAGGGAGAGGGGATGATGGTGGGAAACTATGGTCACACGTaGCCACAACCTTACACTGGGCAGAGGACAGAGGGGGTTGAACTG | + |
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Preference number: 1 (lower is better) Translates to: PEEGEGMMVGNYGHT*PQPYTGQRTEGVEL Trigger: CAGTTCAACCCCCTCTGTCCTCTGCCCAGTGTAAGGTTGTGGCCACGTGTGACCATAGTTTCCCACCATCATCCCCTCTCCCTCTTCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| 3UTR TCA 90 bp | CACAACCTTACACTGGGCAGAGGACAGAGGGGGTTGAACTGGCGCTaGACACAGGACAAACATTTGGGCGAGGGCAACAGGACTGACCTG | + |
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Preference number: 1 (lower is better) Translates to: HNLTLGRGQRGLNWR*TQDKHLGEGNRTDL Trigger: CAGGTCAGTCCTGTTGCCCTCGCCCAAATGTTTGTCCTGTGTTCAGCGCCAGTTCAACCCCCTCTGTCCTCTGCCCAGTGTAAGGTTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| 3UTR TCA 90 bp | TCACACGTGGCCACAACCTTACACTGGGCAGAGGACAGAGGGGGTTaGACTGGCGCTGAACACAGGACAAACATTTGGGCGAGGGCAACA | + |
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Preference number: 1 (lower is better) Translates to: SHVATTLHWAEDRGG*TGAEHRTNIWARAT Trigger: TGTTGCCCTCGCCCAAATGTTTGTCCTGTGTTCAGCGCCAGTTCAACCCCCTCTGTCCTCTGCCCAGTGTAAGGTTGTGGCCACGTGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| 3UTR CCA 90 bp | CCTGCCTGCCACTCTGATACTGCGAGGCGGGAAAGAAAACGTGACTaGGCAGCAGAGAGGAACAGACTTCTTGAAGGCAGTGGTAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: PACHSDTARRERKRD*AAERNRLLEGSGRH Trigger: GTGCCTACCACTGCCTTCAAGAAGTCTGTTCCTCTCTGCTGCCCAGTCACGTTTTCTTTCCCGCCTCGCAGTATCAGAGTGGCAGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| 3UTR GCA 90 bp | AAGCCTGAAGATCAGCTACTGGTTATATCTACAGTGGTAAGGCACTaGTGTTACCAGTCACTTTACAGAACAGTCCAGAGTGGTCAAATA | + |
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Preference number: 1 (lower is better) Translates to: KPEDQLLVISTVVRH*CYQSLYRTVQSGQI Trigger: TATTTGACCACTCTGGACTGTTCTGTAAAGTGACTGGTAACAGCAGTGCCTTACCACTGTAGATATAACCAGTAGCTGATCTTCAGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| 3UTR CAA 90 bp | GGCGGGAAAGAAAACGTGACTGGGCAGCAGAGAGGAACAGACTTCTaGAAGGCAGTGGTAGGCACCTTGAGTCCCTTTAAATGCAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: GGKENVTGQQRGTDF*KAVVGTLSPFKCRG Trigger: CCCCCTGCATTTAAAGGGACTCAAGGTGCCTACCACTGCCTTCAAGAAGTCTGTTCCTCTCTGCTGCCCAGTCACGTTTTCTTTCCCGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| 3UTR-3UTR GCA 90 bp | CAGAGGGTCTTGGAGCTTCTGCGGATTGTACTAGCACAGATGGAGGTGACAGGAACAGTGGTAAGGCACTaGTGTTACCAGTCACTTTAC | + |
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Preference number: 2 (lower is better) Translates to: QRVLELLRIVLAQMEVTGTVVRH*CYQSLY Trigger: GTAAAGTGACTGGTAACAGCAGTGCCTTACCACTGT...TCCTGTCACCTCCATCTGTGCTAGTACAATCCGCAGAAGCTCCAAGACCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| 3UTR-3UTR TCA 90 bp | TCAGCTACTGGTTATATCTACAGTGGTAAGGCACTGCTGTTACCAGTCACTTTAAGAGTGGTCAAATATTaGCCAATAATGCTTCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: SATGYIYSGKALLLPVTLRVVKY*PIMLPL Trigger: CAAAGGAAGCATTATTGGTCAATATTTGACCACTCT...TAAAGTGACTGGTAACAGCAGTGCCTTACCACTGTAGATATAACCAGTAGCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| 3UTR TCA 72 bp | ACACTGGGCAGAGGACAGAGGGGGTTGAACTGGCGCTaGACACAGGACAAACATTTGGGCGAGGGCAACAGG | + |
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Preference number: 3 (lower is better) Translates to: TLGRGQRGLNWR*TQDKHLGEGNR Trigger: CCTGTTGCCCTCGCCCAAATGTTTGTCCTGTGTTCAGCGCCAGTTCAACCCCCTCTGTCCTCTGCCCAGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| 3UTR CCA 72 bp | GGAGAGGGGATGATGGTGGGAAACTATGGTCACACGTaGCCACAACCTTACACTGGGCAGAGGACAGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: GEGMMVGNYGHT*PQPYTGQRTEG Trigger: CCCCTCTGTCCTCTGCCCAGTGTAAGGTTGTGGCCACGTGTGACCATAGTTTCCCACCATCATCCCCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| 3UTR CCA 72 bp | GCCCGAAGAGGGAGAGGGGATGATGGTGGGAAACTATaGTCACACGTGGCCACAACCTTACACTGGGCAGAG | + |
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Preference number: 3 (lower is better) Translates to: ARRGRGDDGGKL*SHVATTLHWAE Trigger: CTCTGCCCAGTGTAAGGTTGTGGCCACGTGTGACCATAGTTTCCCACCATCATCCCCTCTCCCTCTTCGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| 3UTR TCA 72 bp | GCCACAACCTTACACTGGGCAGAGGACAGAGGGGGTTaGACTGGCGCTGAACACAGGACAAACATTTGGGCG | + |
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Preference number: 3 (lower is better) Translates to: ATTLHWAEDRGG*TGAEHRTNIWA Trigger: CGCCCAAATGTTTGTCCTGTGTTCAGCGCCAGTTCAACCCCCTCTGTCCTCTGCCCAGTGTAAGGTTGTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| 3UTR TCA 72 bp | AACACAGGACAAACATTTGGGCGAGGGCAACAGGACTaGCCTGGAGAGAAGGGTGTCAGGCTAGAACTCCAG | + |
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Preference number: 3 (lower is better) Translates to: NTGQTFGRGQQD*PGEKGVRLELQ Trigger: CTGGAGTTCTAGCCTGACACCCTTCTCTCCAGGTCAGTCCTGTTGCCCTCGCCCAAATGTTTGTCCTGTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| 3UTR-3UTR CAA 90 bp | GGGAAAGAAAACGTGACTGGGCAGCAGAGAGGAACAGACTTCTTGAAGGCAGTGCTGAATCATTACTACTaGGAGTCCCGAGACAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: GKENVTGQQRGTDFLKAVLNHYY*ESRDSL Trigger: CAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAG...CACTGCCTTCAAGAAGTCTGTTCCTCTCTGCTGCCCAGTCACGTTTTCTTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| CDS-3UTR CCA 90 bp | GACATCGGGGACTGGGGCCTGCCTGCCACTCTGATACTGCGAGGCGGGAAAGAAGGCTGGCTGCCCATCTaGCTGGAGTTGCTGGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: DIGDWGLPATLILRGGKEGWLPI*LELLAA Trigger: GGCCGCCAGCAACTCCAGCCAGATGGGCAGCCAGCC...TTCTTTCCCGCCTCGCAGTATCAGAGTGGCAGGCAGGCCCCAGTCCCCGATGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| CDS-3UTR TCA 90 bp | GTTGCTGATACGGTGGGGGAGCTAGGGCAAGTGGGGCTGGCAGCGACGACGGAAAGGGTGGGGGATTCCTaGGGTGGGCAGACCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: VADTVGELGQVGLAATTERVGDS*GGQTRM Trigger: CATCCTGGTCTGCCCACCTCAGGAATCCCCCACCCT...TTCCGTCGTCGCTGCCAGCCCCACTTGCCCTAGCTCCCCCACCGTATCAGCAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| CDS-3UTR CCA 90 bp | GACATCGGGGACTGGGGCCTGCCTGCCACTCTGATACTGCGAGGCGGGAAAGAAAGCACGGGGAGGGCCTaGTGGGCATGGAGCGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: DIGDWGLPATLILRGGKESTGRA*WAWSVA Trigger: AGCTACGCTCCATGCCCACCAGGCCCTCCCCGTGCT...TTCTTTCCCGCCTCGCAGTATCAGAGTGGCAGGCAGGCCCCAGTCCCCGATGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| CDS-3UTR TCA 90 bp | GACATCGGGGACTGGGGCCTGCCTGCCACTCTGATACTGCGAGGCGGGAAAGAAGACCAGGCTGGACATTaGAGCGTTCATGGCGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: DIGDWGLPATLILRGGKEDQAGH*SVHGEG Trigger: GCCCTCGCCATGAACGCTTCAATGTCCAGCCTGGTC...TTCTTTCCCGCCTCGCAGTATCAGAGTGGCAGGCAGGCCCCAGTCCCCGATGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| CDS-3UTR CCA 90 bp | GTGGTGGGGGAAGGGGCAGAGGGTCTTGGAGCTTCTGCGGATTGTACTAGCACACCAAGGGCAAGGGCCTaGATAGGAGTGGGGGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: VVGEGAEGLGASADCTSTPRARA*IGVGAG Trigger: GCCAGCCCCCACTCCTATCCAGGCCCTTGCCCTTGG...TGTGCTAGTACAATCCGCAGAAGCTCCAAGACCCTCTGCCCCTTCCCCCACCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| CDS-3UTR CCA 90 bp | CCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATGGGCTGCCCTTGCTGTaGGACGAGCCAGCCGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: PPSSPLNHYYLESRDSLHGLPLL*DEPAEG Trigger: CCCCTCGGCTGGCTCGTCCCACAGCAAGGGCAGCCC...ATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR TCA 90 bp | TGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCGCAGGGGCAGCTGGTaGGGCCAAGGCTGCGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: CVSPFLSSESLLLGVPRQRRGSW*GQGCGG Trigger: CCCTCCGCAGCCTTGGCCTCACCAGCTGCCCCTGCG...CTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CCA 90 bp | TCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGGGGCTGCCCTTGCTGTaGGACGAGCCAGCCGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: SPLNHYYLESRDSLHRTGGLPLL*DEPAEG Trigger: CCCCTCGGCTGGCTCGTCCCACAGCAAGGGCAGCCC...CCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGA 60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CCA 90 bp | GTGGTGGGGGAAGGGGCAGAGGGTCTTGGAGCTTCTGCGGATTGTACTAGCACAGTGGGCAGACCAGGATaGGCAGGAGCCACCATGTGT | + |
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Preference number: 4 (lower is better) Translates to: VVGEGAEGLGASADCTSTVGRPG*AGATMC Trigger: ACACATGGTGGCTCCTGCCCATCCTGGTCTGCCCAC...TGTGCTAGTACAATCCGCAGAAGCTCCAAGACCCTCTGCCCCTTCCCCCACCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| CDS-3UTR CCA 90 bp | CCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATGAGTGGAGAGCCAGCTaGGCCCGGGCCTCCGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: PPSSPLNHYYLESRDSLHEWRAS*ARASGL Trigger: CAAACCGGAGGCCCGGGCCCAGCTGGCTCTCCACTC...ATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CCA 90 bp | TCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCAGGCTGGCTGCCCATCTaGCTGGAGTTGCTGGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: SPFLSSESLLLGVPRQPAGWLPI*LELLAA Trigger: GGCCGCCAGCAACTCCAGCCAGATGGGCAGCCAGCC...TGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR TCA 90 bp | TCCTTTGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGACGCAGGGGCAGCTGGTaGGGCCAAGGCTGCGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: SFVFPPSSPLNHYYLESRRRGSW*GQGCGG Trigger: CCCTCCGCAGCCTTGGCCTCACCAGCTGCCCCTGCG...TCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACAAAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR TCA 90 bp | TCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCACCTCCGGTTTGGTGGTaGGCGACAGGGGCTGCGCTT | + |
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Preference number: 4 (lower is better) Translates to: SPFLSSESLLLGVPRQPAPPVWW*ATGAAL Trigger: AAGCGCAGCCCCTGTCGCTCACCACCAAACCGGAGG...TGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR TCA 90 bp | CCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATCCTCCGGTTTGGTGGTaGGCGACAGGGGCTGCGCTT | + |
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Preference number: 4 (lower is better) Translates to: PPSSPLNHYYLESRDSLHPPVWW*ATGAAL Trigger: AAGCGCAGCCCCTGTCGCTCACCACCAAACCGGAGG...ATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CCA 90 bp | GACATCGGGGACTGGGGCCTGCCTGCCACTCTGATACTGCGAGGCGGGAAAGAACAAGTGTGCTGGAGATaGCGACCTTGTGTCCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: DIGDWGLPATLILRGGKEQVCWR*RPCVLD Trigger: GTCAAGGACACAAGGTCGCCATCTCCAGCACACTTG...TTCTTTCCCGCCTCGCAGTATCAGAGTGGCAGGCAGGCCCCAGTCCCCGATGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| CDS-3UTR CCA 90 bp | TCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATGCGCTTGCTCGGAGTaGGTAGCCGCAGGGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SPFLSSESLLLGVPRQPACACSE*VAAGAA Trigger: AGCTGCCCCTGCGGCTACCCACTCCGAGCAAGCGCA...TGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CCA 90 bp | CTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGGGCAGCGATAGGAGTGGGGGCTaGCTGCCCATCTGGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: LNHYYLESRDSLHRTGGSDRSGG*LPIWLE Trigger: CTCCAGCCAGATGGGCAGCCAGCCCCCACTCCTATC...GCTGCCCCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CCA 90 bp | TCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGACGGGGAGGGCCTGGTaGGCATGGAGCGTAGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SPLNHYYLESRDSLHRTGTGRAW*AWSVAG Trigger: CCCAGCTACGCTCCATGCCCACCAGGCCCTCCCCGT...CCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR GCA 90 bp | TACCCACCACAGCGCAAGGGGAGGGAGCAACACACTGCTTTTCAGTGCTTTCTTTACATGGGCTGCCCTTaGTGTGGGACGAGCCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: YPPQRKGREQHTAFQCFLYMGCP*CGTSQP Trigger: CGGCTGGCTCGTCCCACAGCAAGGGCAGCCCATGTA...AAGAAAGCACTGAAAAGCAGTGTGTTGCTCCCTCCCCTTGCGCTGTGGTGGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| CDS-3UTR GCA 90 bp | CAGAGGGTCTTGGAGCTTCTGCGGATTGTACTAGCACAGATGGAGGTGACAGGAGGATTTCGCACTCACTaGAGGGCTCAGGCTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: QRVLELLRIVLAQMEVTGGFRTH*RAQAGG Trigger: GCCCCCAGCCTGAGCCCTGCAGTGAGTGCGAAATCC...TCCTGTCACCTCCATCTGTGCTAGTACAATCCGCAGAAGCTCCAAGACCCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| CDS-3UTR GCA 90 bp | TTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGGGAGTGGGGGCTGGCTaGCCATCTGGCTGGAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: FPPSSPLNHYYLESRDSLGVGAG*PSGWSC Trigger: GCAACTCCAGCCAGATGGGCAGCCAGCCCCCACTCC...CAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CCA 90 bp | CTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGGGCAGCGAGACAGGGGTCCGTTaGAGAGGTACGGGCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LNHYYLESRDSLHRTGGSETGVR*RGTGCS Trigger: TGAGCAGCCCGTACCTCTCCAACGGACCCCTGTCTC...GCTGCCCCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CCA 90 bp | ACAAACATTTGGGCGAGGGCAACAGGACTGACCTGGAGAGAAGGGTGTCAGGCTAGCCAGCCGAGGGGATaGGGGATTTGTCCGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: TNIWARATGLTWREGCQASQPRG*GICPTA Trigger: AGCTGTCGGACAAATCCCCCATCCCCTCGGCTGGCT...AGCCTGACACCCTTCTCTCCAGGTCAGTCCTGTTGCCCTCGCCCAAATGTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| CDS-3UTR CCA 90 bp | CCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGGGCAGCCAGCCGAGGGGATaGGGGATTTGTCCGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: PLNHYYLESRDSLHRTGGSQPRG*GICPTA Trigger: AGCTGTCGGACAAATCCCCCATCCCCTCGGCTGGCT...GCCCCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CCA 90 bp | TGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGGAGTGGAGAGCCAGCTaGGCCCGGGCCTCCGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: CVSPFLSSESLLLGVPRQEWRAS*ARASGL Trigger: CAAACCGGAGGCCCGGGCCCAGCTGGCTCTCCACTC...CTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CCA 90 bp | CCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGGGCACCAAGGAAAGAGGCTaGGCCTGTAGCACGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: PLNHYYLESRDSLHRTGGTKERG*ACSTGR Trigger: CCTCCCCGTGCTACAGGCCCAGCCTCTTTCCTTGGT...GCCCCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR TCA 90 bp | CTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGGGCAGCAGTGGGCAGACTTGGTaGCCAAGGAAAGAGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LNHYYLESRDSLHRTGGSSGQTW*PRKEAG Trigger: CCCAGCCTCTTTCCTTGGTCACCAAGTCTGCCCACT...GCTGCCCCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR GCA 90 bp | GTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTATCTCTGGGGACAGATaGGTGGGAGGGGACGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VSPFLSSESLLLGVPRQPISGDR*VGGDAG Trigger: CCCTGCGTCCCCTCCCACGCATCTGTCCCCAGAGAT...AGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR GCA 90 bp | TCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGTACATGGGCTGCCCTTaGTGTGGGACGAGCCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: SPLNHYYLESRDSLHRTGYMGCP*CGTSQP Trigger: CGGCTGGCTCGTCCCACAGCAAGGGCAGCCCATGTA...CCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR GCA 90 bp | GTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCGGATTTCGCACTCACTaGAGGGCTCAGGCTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: VFPPSSPLNHYYLESRDSGFRTH*RAQAGG Trigger: GCCCCCAGCCTGAGCCCTGCAGTGAGTGCGAAATCC...GCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR GCA 90 bp | TGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGGGGAGTCCAGCGTGCTaGCATGGGAAGACGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CVSPFLSSESLLLGVPRQGSPAC*HGKTQG Trigger: GCCCTGCGTCTTCCCATGGCAGCACGCTGGACTCCC...CTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR GCA 90 bp | CCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAGGGAGTCCAGCGTGCTaGCATGGGAAGACGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSSPLNHYYLESRDSLHRGSPAC*HGKTQG Trigger: GCCCTGCGTCTTCCCATGGCAGCACGCTGGACTCCC...TCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAAGAAAACGTGACTGGGCAGCAGAGAGGAACAGACTTCTTGAAGGCAGTGGGGGGATTCCTGAGGTaGGCAGACCAGGATGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKENVTGQQRGTDFLKAVGGFLR*ADQDGQ Trigger: CTGCCCATCCTGGTCTGCCCACCTCAGGAATCCCCC...CACTGCCTTCAAGAAGTCTGTTCCTCTCTGCTGCCCAGTCACGTTTTCTTTCCC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
||
| CDS-3UTR CCA 90 bp | TCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCTGCGCTTGCTCGGAGTaGGTAGCCGCAGGGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSPLNHYYLESRDSLHRTCACSE*VAAGAA Trigger: AGCTGCCCCTGCGGCTACCCACTCCGAGCAAGCGCA...GGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | CCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGACCAAGGGCAAGGGCCTaGATAGGAGTGGGGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSSPLNHYYLESRDSLHRPRARA*IGVGAG Trigger: GCCAGCCCCCACTCCTATCCAGGCCCTTGCCCTTGG...TCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | TTTGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACACGGGGAGGGCCTGGTaGGCATGGAGCGTAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FVFPPSSPLNHYYLESRDTGRAW*AWSVAG Trigger: CCCAGCTACGCTCCATGCCCACCAGGCCCTCCCCGT...GTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR TCA 90 bp | TCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGGACCAGGCTGGACATTaGAGCGTTCATGGCGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPLNHYYLESRDSLHRTGDQAGH*SVHGEG Trigger: GCCCTCGCCATGAACGCTTCAATGTCCAGCCTGGTC...CCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR GCA 90 bp | GTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCTCAGGCTGGGGGCTaGTGGCTCCTGCTTCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: VSPFLSSESLLLGVPRQPAQAGG*WLLLHN Trigger: ATTGTGAAGCAGGAGCCAGCAGCCCCCAGCCTGAGC...AGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | ACAAACATTTGGGCGAGGGCAACAGGACTGACCTGGAGAGAAGGGTGTCAGGCTCGGGCTGCTCAGGTCTaGAATCATCAGGAAGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TNIWARATGLTWREGCQARAAQV*NHQEGV Trigger: TACCCCTTCCTGATGATTCCAGACCTGAGCAGCCCG...AGCCTGACACCCTTCTCTCCAGGTCAGTCCTGTTGCCCTCGCCCAAATGTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
||
| CDS-3UTR CCA 90 bp | GTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGTGGGCAGACCAGGATaGGCAGGAGCCACCATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSPFLSSESLLLGVPRQPVGRPG*AGATMC Trigger: ACACATGGTGGCTCCTGCCCATCCTGGTCTGCCCAC...AGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | CCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGACAGGCTGGGGGCTGCTaGCTCCTGCTTCACAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSSPLNHYYLESRDSLHRQAGGC*LLLHNG Trigger: CCCATTGTGAAGCAGGAGCCAGCAGCCCCCAGCCTG...TCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | CCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATTCCAGCGTGCTGCCATaGGAAGACGCAGGGCTATCA | + |
|
Preference number: 4 (lower is better) Translates to: PPSSPLNHYYLESRDSLHSSVLP*EDAGLS Trigger: TGATAGCCCTGCGTCTTCCCATGGCAGCACGCTGGA...ATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | TCCTTTGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAAGCACGGGGAGGGCCTaGTGGGCATGGAGCGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFVFPPSSPLNHYYLESRSTGRA*WAWSVA Trigger: AGCTACGCTCCATGCCCACCAGGCCCTCCCCGTGCT...TCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACAAAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| 3UTR CAA 72 bp | GTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTaGGAGTCCCGAGACAGCCTGCATAGAACCGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VFPPSSPLNHYY*ESRDSLHRTGG Trigger: GCCCCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR GCA 90 bp | CTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGGGCAGCCGGAGTCCGAGCTACTaGTCTGATTCTCCGATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LNHYYLESRDSLHRTGGSRSPSY*SDSPIR Trigger: ACGAATCGGAGAATCAGAGCAGTAGCTCGGACTCCG...GCTGCCCCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR GCA 90 bp | CCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGGGCTGGAGAGGTACGGGCTaGTCAGGTCTGGAATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PLNHYYLESRDSLHRTGGWRGTG*SGLESS Trigger: TGATGATTCCAGACCTGAGCAGCCCGTACCTCTCCA...GCCCCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR GCA 90 bp | GTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCAGAGAGTACATGGGCTaGCCTTGCTGTGGGACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VFPPSSPLNHYYLESRDSREYMG*PCCGTS Trigger: GCTCGTCCCACAGCAAGGGCAGCCCATGTACTCTCT...GCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR GCA 90 bp | TCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGAGAGAGTACATGGGCTaGCCTTGCTGTGGGACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPLNHYYLESRDSLHRTGREYMG*PCCGTS Trigger: GCTCGTCCCACAGCAAGGGCAGCCCATGTACTCTCT...CCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGAGACAGGGGTCCGTTaGAGAGGTACGGGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSPLNHYYLESRDSLHRTETGVR*RGTGCS Trigger: TGAGCAGCCCGTACCTCTCCAACGGACCCCTGTCTC...GGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGGAGGGAGAGAGTACATaGGCTGCCCTTGCTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPLNHYYLESRDSLHRTGEGEST*AALAVG Trigger: TCCCACAGCAAGGGCAGCCCATGTACTCTCTCCCTC...CCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | CTTTGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGAGGGGGATTCCTGAGGTaGGCAGACCAGGATGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LCVSPFLSSESLLLGVPRGGFLR*ADQDGQ Trigger: CTGCCCATCCTGGTCTGCCCACCTCAGGAATCCCCC...TCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | TTTGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACCAGGCTGGGGGCTGCTaGCTCCTGCTTCACAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: FVFPPSSPLNHYYLESRDQAGGC*LLLHNG Trigger: CCCATTGTGAAGCAGGAGCCAGCAGCCCCCAGCCTG...GTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | GGGAAAGAAAACGTGACTGGGCAGCAGAGAGGAACAGACTTCTTGAAGGCAGTGTCCAGCGTGCTGCCATaGGAAGACGCAGGGCTATCA | + |
|
Preference number: 4 (lower is better) Translates to: GKENVTGQQRGTDFLKAVSSVLP*EDAGLS Trigger: TGATAGCCCTGCGTCTTCCCATGGCAGCACGCTGGA...CACTGCCTTCAAGAAGTCTGTTCCTCTCTGCTGCCCAGTCACGTTTTCTTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
||
| CDS-3UTR CCA 90 bp | TTTGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACGATAGGAGTGGGGGCTaGCTGCCCATCTGGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FVFPPSSPLNHYYLESRDDRSGG*LPIWLE Trigger: CTCCAGCCAGATGGGCAGCCAGCCCCCACTCCTATC...GTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | TTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGAGGGCCTGGTGGGCATaGAGCGTAGCTGGGAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FPPSSPLNHYYLESRDSLRAWWA*SVAGKV Trigger: TACTTTCCCAGCTACGCTCCATGCCCACCAGGCCCT...CAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCACCAAGGAAAGAGGCTaGGCCTGTAGCACGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPLNHYYLESRDSLHRTTKERG*ACSTGR Trigger: CCTCCCCGTGCTACAGGCCCAGCCTCTTTCCTTGGT...GGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR TCA 90 bp | TCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCACAGTGGGTAATACGGTaGCAGCTCAGATGGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPFLSSESLLLGVPRQPAQWVIR*QLRWMR Trigger: CCTCATCCATCTGAGCTGTCACCGTATTACCCACTG...TGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR TCA 90 bp | ACACAGGACAAACATTTGGGCGAGGGCAACAGGACTGACCTGGAGAGAAGGGTGAGGGGCTTTTTCACGTaGGGTTTCTTCTCCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TQDKHLGEGNRTDLERRVRGFFT*GFFSSS Trigger: GGAAGAGGAGAAGAAACCTCACGTGAAAAAGCCCCT...CACCCTTCTCTCCAGGTCAGTCCTGTTGCCCTCGCCCAAATGTTTGTCCTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
||
| CDS-3UTR TCA 90 bp | TGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGAGTGGGCAGACTTGGTaGCCAAGGAAAGAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CVSPFLSSESLLLGVPRQSGQTW*PRKEAG Trigger: CCCAGCCTCTTTCCTTGGTCACCAAGTCTGCCCACT...CTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR GCA 90 bp | CCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATCGGAGTCCGAGCTACTaGTCTGATTCTCCGATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PPSSPLNHYYLESRDSLHRSPSY*SDSPIR Trigger: ACGAATCGGAGAATCAGAGCAGTAGCTCGGACTCCG...ATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR GCA 90 bp | TCCTTTGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGCTCAGGCTGGGGGCTaGTGGCTCCTGCTTCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFVFPPSSPLNHYYLESRAQAGG*WLLLHN Trigger: ATTGTGAAGCAGGAGCCAGCAGCCCCCAGCCTGAGC...TCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACAAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGGGGGATTCCTGTCTTTaGGTCGATCTCTGGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SPLNHYYLESRDSLHRTGGDSCL*VDLWGQ Trigger: CTGTCCCCAGAGATCGACCCAAAGACAGGAATCCCC...CCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGA 53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | GTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCGGGGATTCCTGTCTTTaGGTCGATCTCTGGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: VFPPSSPLNHYYLESRDSGDSCL*VDLWGQ Trigger: CTGTCCCCAGAGATCGACCCAAAGACAGGAATCCCC...GCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | TACCCACCACAGCGCAAGGGGAGGGAGCAACACACTGCTTTTCAGTGCTTTCTTTTGTCCGACAGCTCCTaGAGACAGTGGGTAATACGG | + |
|
Preference number: 4 (lower is better) Translates to: YPPQRKGREQHTAFQCFLLSDSS*RQWVIR Trigger: CCGTATTACCCACTGTCTCCAGGAGCTGTCGGACAA...AAGAAAGCACTGAAAAGCAGTGTGTTGCTCCCTCCCCTTGCGCTGTGGTGGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
||
| CDS-3UTR CCA 90 bp | CCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATTTGTCCGACAGCTCCTaGAGACAGTGGGTAATACGG | + |
|
Preference number: 4 (lower is better) Translates to: PPSSPLNHYYLESRDSLHLSDSS*RQWVIR Trigger: CCGTATTACCCACTGTCTCCAGGAGCTGTCGGACAA...ATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | TGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGGAGGGAGAGAGTACATaGGCTGCCCTTGCTGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CVSPFLSSESLLLGVPRQEGEST*AALAVG Trigger: TCCCACAGCAAGGGCAGCCCATGTACTCTCTCCCTC...CTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | CTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGGGCAGCACATTGAAGCGTTCATaGCGAGGGCAGGGTAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LNHYYLESRDSLHRTGGSTLKRS*RGQGKD Trigger: ATCCTTACCCTGCCCTCGCCATGAACGCTTCAATGT...GCTGCCCCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGCTCCTGCTTCACAATaGGGGAGACGATGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSPLNHYYLESRDSLHRTAPASQ*GRRWQG Trigger: ACCCTGCCATCGTCTCCCCCATTGTGAAGCAGGAGC...GGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR TCA 90 bp | GTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTCAGTGGGTAATACGGTaGCAGCTCAGATGGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSPFLSSESLLLGVPRQPQWVIR*QLRWMR Trigger: CCTCATCCATCTGAGCTGTCACCGTATTACCCACTG...AGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | TCCTTTGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGCTCCTGCTTCACAATaGGGGAGACGATGGCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFVFPPSSPLNHYYLESRAPASQ*GRRWQG Trigger: ACCCTGCCATCGTCTCCCCCATTGTGAAGCAGGAGC...TCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACAAAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CCA 90 bp | CTTTGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGAAGGGCCTGGTGGGCATaGAGCGTAGCTGGGAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LCVSPFLSSESLLLGVPRRAWWA*SVAGKV Trigger: TACTTTCCCAGCTACGCTCCATGCCCACCAGGCCCT...TCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR GCA 90 bp | TGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGTGGAGAGGTACGGGCTaGTCAGGTCTGGAATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: CVSPFLSSESLLLGVPRQWRGTG*SGLESS Trigger: TGATGATTCCAGACCTGAGCAGCCCGTACCTCTCCA...CTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR GCA 90 bp | TTTGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACTCATCTGTAGGTAGGTaGGCGCTCCACCAGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: FVFPPSSPLNHYYLESRDSSVGR*ALHQET Trigger: TGTCTCCTGGTGGAGCGCGCACCTACCTACAGATGA...GTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR GCA 90 bp | TCAGCTACTGGTTATATCTACAGTGGTAAGGCACTGCTGTTACCAGTCACTTTAATCTCTGGGGACAGATaGGTGGGAGGGGACGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SATGYIYSGKALLLPVTLISGDR*VGGDAG Trigger: CCCTGCGTCCCCTCCCACGCATCTGTCCCCAGAGAT...TAAAGTGACTGGTAACAGCAGTGCCTTACCACTGTAGATATAACCAGTAGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
||
| CDS-3UTR GCA 90 bp | CCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGGGCTCTCTTGACAGGTTGTaGCACTTTCTTCCCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: PLNHYYLESRDSLHRTGGSLDRL*HFLPRI Trigger: AATCCTGGGAAGAAAGTGGCACAACCTGTCAAGAGA...GCCCCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CCA 90 bp | TCCTTTGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGACGGGCTGCTCAGGTCTaGAATCATCAGGAAGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SFVFPPSSPLNHYYLESRRAAQV*NHQEGV Trigger: TACCCCTTCCTGATGATTCCAGACCTGAGCAGCCCG...TCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACAAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR TCA 90 bp | CCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAAGGGGCTTTTTCACGTaGGGTTTCTTCTCCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSSPLNHYYLESRDSLHRRGFFT*GFFSSS Trigger: GGAAGAGGAGAAGAAACCTCACGTGAAAAAGCCCCT...TCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CCA 90 bp | CTTTGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGAGGCTTGAGACCAGGCTaGACATTGAAGCGTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LCVSPFLSSESLLLGVPRGLRPG*TLKRSW Trigger: CCATGAACGCTTCAATGTCCAGCCTGGTCTCAAGCC...TCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CCA 90 bp | TCCTTTGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGGCTTGAGACCAGGCTaGACATTGAAGCGTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SFVFPPSSPLNHYYLESRGLRPG*TLKRSW Trigger: CCATGAACGCTTCAATGTCCAGCCTGGTCTCAAGCC...TCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACAAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CCA 90 bp | TTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCAGGTACTGAATGCATaGCTTCTTGCTCTTAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPPSSPLNHYYLESRDSLQVLNA*LLALRG Trigger: GCCTCTAAGAGCAAGAAGCCATGCATTCAGTACCTG...CAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR GCA 90 bp | TCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCAGATTTGGTTAATGGCTaGACTTTCCTTCAGGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SPFLSSESLLLGVPRQPADLVNG*TFLQGT Trigger: TGTACCCTGAAGGAAAGTGCAGCCATTAACCAAATC...TGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR GCA 90 bp | GGGAAAGAAAACGTGACTGGGCAGCAGAGAGGAACAGACTTCTTGAAGGCAGTGTCTCTTGACAGGTTGTaGCACTTTCTTCCCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: GKENVTGQQRGTDFLKAVSLDRL*HFLPRI Trigger: AATCCTGGGAAGAAAGTGGCACAACCTGTCAAGAGA...CACTGCCTTCAAGAAGTCTGTTCCTCTCTGCTGCCCAGTCACGTTTTCTTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| CDS-3UTR CCA 90 bp | CTTTGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGAACATTGAAGCGTTCATaGCGAGGGCAGGGTAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LCVSPFLSSESLLLGVPRTLKRS*RGQGKD Trigger: ATCCTTACCCTGCCCTCGCCATGAACGCTTCAATGT...TCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CCA 90 bp | TCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATTTCTTCCCAGGATTTaGTTAATGGCTGCACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPFLSSESLLLGVPRQPAFLPRI*LMAALS Trigger: GGAAAGTGCAGCCATTAACCAAATCCTGGGAAGAAA...TGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CCA 90 bp | TTTGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACCAGGTACTGAATGCATaGCTTCTTGCTCTTAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FVFPPSSPLNHYYLESRDQVLNA*LLALRG Trigger: GCCTCTAAGAGCAAGAAGCCATGCATTCAGTACCTG...GTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR GCA 90 bp | CCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAGATTTGGTTAATGGCTaGACTTTCCTTCAGGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PSSPLNHYYLESRDSLHRDLVNG*TFLQGT Trigger: TGTACCCTGAAGGAAAGTGCAGCCATTAACCAAATC...TCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CCA 90 bp | TCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCTTTCTTCCCAGGATTTaGTTAATGGCTGCACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSPLNHYYLESRDSLHRTFLPRI*LMAALS Trigger: GGAAAGTGCAGCCATTAACCAAATCCTGGGAAGAAA...GGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS GCA 90 bp | GCCAGCTGGGCCCGGGCCTCCGGTTTGGTGGTGAGCGACAGGGGCTaGGCTTGCTCGGAGTGGGTAGCCGCAGGGGCAGCTGGTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASWARASGLVVSDRG*ACSEWVAAGAAGEA Trigger: GGCCTCACCAGCTGCCCCTGCGGCTACCCACTCCGAGCAAGCGCAGCCCCTGTCGCTCACCACCAAACCGGAGGCCCGGGCCCAGCTGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CCA 90 bp | GCGGCCGCCTTAGCCGACAGGAAGGCAGCGGAGTGGAGAGCCAGCTaGGCCCGGGCCTCCGGTTTGGTGGTGAGCGACAGGGGCTGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: AAALADRKAAEWRAS*ARASGLVVSDRGCA Trigger: AGCGCAGCCCCTGTCGCTCACCACCAAACCGGAGGCCCGGGCCCAGCTGGCTCTCCACTCCGCTGCCTTCCTGTCGGCTAAGGCGGCCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS GCA 90 bp | TGGGCCCGGGCCTCCGGTTTGGTGGTGAGCGACAGGGGCTGCGCTTaGTCGGAGTGGGTAGCCGCAGGGGCAGCTGGTGAGGCCAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: WARASGLVVSDRGCA*SEWVAAGAAGEAKA Trigger: AGCCTTGGCCTCACCAGCTGCCCCTGCGGCTACCCACTCCGAGCAAGCGCAGCCCCTGTCGCTCACCACCAAACCGGAGGCCCGGGCCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CCA 90 bp | GCCTCCGGTTTGGTGGTGAGCGACAGGGGCTGCGCTTGCTCGGAGTaGGTAGCCGCAGGGGCAGCTGGTGAGGCCAAGGCTGCGGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: ASGLVVSDRGCACSE*VAAGAAGEAKAAEG Trigger: GCCCTCCGCAGCCTTGGCCTCACCAGCTGCCCCTGCGGCTACCCACTCCGAGCAAGCGCAGCCCCTGTCGCTCACCACCAAACCGGAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CCA 90 bp | CTGGAGTTGCTGGCGGCCGCCTTAGCCGACAGGAAGGCAGCGGAGTaGAGAGCCAGCTGGGCCCGGGCCTCCGGTTTGGTGGTGAGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: LELLAAALADRKAAE*RASWARASGLVVSD Trigger: GTCGCTCACCACCAAACCGGAGGCCCGGGCCCAGCTGGCTCTCCACTCCGCTGCCTTCCTGTCGGCTAAGGCGGCCGCCAGCAACTCCAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CCA 90 bp | CCCAAGGGCAAGGGCCTGGATAGGAGTGGGGGCTGGCTGCCCATCTaGCTGGAGTTGCTGGCGGCCGCCTTAGCCGACAGGAAGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PKGKGLDRSGGWLPI*LELLAAALADRKAA Trigger: CGCTGCCTTCCTGTCGGCTAAGGCGGCCGCCAGCAACTCCAGCCAGATGGGCAGCCAGCCCCCACTCCTATCCAGGCCCTTGCCCTTGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS GCA 90 bp | GTGAGGCCAAGGCTGCGGAGGGCGTCGCAGGGGAGTCCAGCGTGCTaGCATGGGAAGACGCAGGGCTATCACAAGGCTTCTCAGGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VRPRLRRASQGSPAC*HGKTQGYHKASQGA Trigger: TGCCCCCTGAGAAGCCTTGTGATAGCCCTGCGTCTTCCCATGGCAGCACGCTGGACTCCCCTGCGACGCCCTCCGCAGCCTTGGCCTCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS GCA 90 bp | CTGGTGAGGCCAAGGCTGCGGAGGGCGTCGCAGGGGAGTCCAGCGTaGTGCCATGGGAAGACGCAGGGCTATCACAAGGCTTCTCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LVRPRLRRASQGSPA*CHGKTQGYHKASQG Trigger: CCCCTGAGAAGCCTTGTGATAGCCCTGCGTCTTCCCATGGCAGCACGCTGGACTCCCCTGCGACGCCCTCCGCAGCCTTGGCCTCACCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CCA 90 bp | GGGCAGGGTAAGGATGCCGGAAACCACCCGGAGGGAGAGAGTACATaGGCTGCCCTTGCTGTGGGACGAGCCAGCCGAGGGGATGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GQGKDAGNHPEGEST*AALAVGRASRGDGG Trigger: TCCCCCATCCCCTCGGCTGGCTCGTCCCACAGCAAGGGCAGCCCATGTACTCTCTCCCTCCGGGTGGTTTCCGGCATCCTTACCCTGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CCA 90 bp | GCCAAGGCTGCGGAGGGCGTCGCAGGGGAGTCCAGCGTGCTGCCATaGGAAGACGCAGGGCTATCACAAGGCTTCTCAGGGGGCAGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: AKAAEGVAGESSVLP*EDAGLSQGFSGGRY Trigger: GTACCTGCCCCCTGAGAAGCCTTGTGATAGCCCTGCGTCTTCCCATGGCAGCACGCTGGACTCCCCTGCGACGCCCTCCGCAGCCTTGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CAA 90 bp | GATTGTACTAGCACAGATGGAGGTGACAGGAGCCAGACATCGGGGACTGGGGCCCGTCCCCTCCACTGGTaGCCCCGGCTCCGGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: DCTSTDGGDRSQTSGTGARPLHW*PRLRSH Trigger: GTGGCTCCGGAGCCGGGGCAACCAGTGGAGGGGACG...GGCCCCAGTCCCCGATGTCTGGCTCCTGTCACCTCCATCTGTGCTAGTACAATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| CDS CCA 90 bp | TTGGTGACCAAGGAAAGAGGCTGGGCCTGTAGCACGGGGAGGGCCTaGTGGGCATGGAGCGTAGCTGGGAAAGTAGGGGGAGAGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LVTKERGWACSTGRA*WAWSVAGKVGGEVS Trigger: GCTGACCTCTCCCCCTACTTTCCCAGCTACGCTCCATGCCCACCAGGCCCTCCCCGTGCTACAGGCCCAGCCTCTTTCCTTGGTCACCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CAA 90 bp | GTTGCTGATACGGTGGGGGAGCTAGGGCAAGTGGGGCTGGCAGCGACGACGGAAGAGGGGATGGGGGATTaGTCCGACAGCTCCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VADTVGELGQVGLAATTEEGMGD*SDSSWR Trigger: TCTCCAGGAGCTGTCGGACAAATCCCCCATCCCCTC...TTCCGTCGTCGCTGCCAGCCCCACTTGCCCTAGCTCCCCCACCGTATCAGCAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| CDS GCA 90 bp | TGCGCGCTCCACCAGGAGACAGGGGTCCGTTGGAGAGGTACGGGCTaGTCAGGTCTGGAATCATCAGGAAGGGGTACCCAGGATACGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CALHQETGVRWRGTG*SGLESSGRGTQDTQ Trigger: CTGCGTATCCTGGGTACCCCTTCCTGATGATTCCAGACCTGAGCAGCCCGTACCTCTCCAACGGACCCCTGTCTCCTGGTGGAGCGCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 ENSMUST00000149446.3 |
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| CDS CCA 90 bp | TCATCTGTAGGTAGGTGCGCGCTCCACCAGGAGACAGGGGTCCGTTaGAGAGGTACGGGCTGCTCAGGTCTGGAATCATCAGGAAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSVGRCALHQETGVR*RGTGCSGLESSGRG Trigger: ACCCCTTCCTGATGATTCCAGACCTGAGCAGCCCGTACCTCTCCAACGGACCCCTGTCTCCTGGTGGAGCGCGCACCTACCTACAGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 ENSMUST00000149446.3 |
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| CDS-3UTR CAA 90 bp | TCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCCGTCCCCTCCACTGGTaGCCCCGGCTCCGGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSPLNHYYLESRDSLHRTRPLHW*PRLRSH Trigger: GTGGCTCCGGAGCCGGGGCAACCAGTGGAGGGGACG...GGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CCA 90 bp | TGTGGGAGGCACCATCCAACGGGCAGGATCCCCATACAAGTGTGCTaGAGATGGCGACCTTGTGTCCTTGACTGTAGCACTGGAGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: CGRHHPTGRIPIQVC*RWRPCVLDCSTGGD Trigger: GTCCCCTCCAGTGCTACAGTCAAGGACACAAGGTCGCCATCTCCAGCACACTTGTATGGGGATCCTGCCCGTTGGATGGTGCCTCCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114053.9 |
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| CDS-3UTR CAA 90 bp | TACCCACCACAGCGCAAGGGGAGGGAGCAACACACTGCTTTTCAGTGCTTTCTTCCCGGGCTGACCAGGTaGGGTAGAGCTGCGCGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: YPPQRKGREQHTAFQCFLPGLTR*GRAARE Trigger: TTCACGCGCAGCTCTACCCAACCTGGTCAGCCCGGG...AAGAAAGCACTGAAAAGCAGTGTGTTGCTCCCTCCCCTTGCGCTGTGGTGGGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| CDS GCA 90 bp | GAATGTGGGAGGCACCATCCAACGGGCAGGATCCCCATACAAGTGTaGTGGAGATGGCGACCTTGTGTCCTTGACTGTAGCACTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ECGRHHPTGRIPIQV*WRWRPCVLDCSTGG Trigger: CCCTCCAGTGCTACAGTCAAGGACACAAGGTCGCCATCTCCAGCACACTTGTATGGGGATCCTGCCCGTTGGATGGTGCCTCCCACATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114053.9 |
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| CDS CCA 90 bp | ACCAGGAGACAGGGGTCCGTTGGAGAGGTACGGGCTGCTCAGGTCTaGAATCATCAGGAAGGGGTACCCAGGATACGCAGGTCCCTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: TRRQGSVGEVRAAQV*NHQEGVPRIRRSLK Trigger: TTTAAGGGACCTGCGTATCCTGGGTACCCCTTCCTGATGATTCCAGACCTGAGCAGCCCGTACCTCTCCAACGGACCCCTGTCTCCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 ENSMUST00000149446.3 |
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| CDS CCA 90 bp | AGGCACCATCCAACGGGCAGGATCCCCATACAAGTGTGCTGGAGATaGCGACCTTGTGTCCTTGACTGTAGCACTGGAGGGGACATCGAG | + |
|
Preference number: 5 (lower is better) Translates to: RHHPTGRIPIQVCWR*RPCVLDCSTGGDIE Trigger: CTCGATGTCCCCTCCAGTGCTACAGTCAAGGACACAAGGTCGCCATCTCCAGCACACTTGTATGGGGATCCTGCCCGTTGGATGGTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114053.9 |
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| CDS-3UTR CAA 90 bp | TCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGGGAGACAGGGGTCCGTaGGAGAGGTACGGGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPLNHYYLESRDSLHRTGGDRGP*ERYGLL Trigger: GAGCAGCCCGTACCTCTCCAACGGACCCCTGTCTCC...CCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CAA 90 bp | CCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGGGCGAGGGGATGGGGGATTaGTCCGACAGCTCCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLNHYYLESRDSLHRTGGEGMGD*SDSSWR Trigger: TCTCCAGGAGCTGTCGGACAAATCCCCCATCCCCTC...GCCCCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CAA 90 bp | GTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTCCCGGGCTGACCAGGTaGGGTAGAGCTGCGCGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: VSPFLSSESLLLGVPRQPPGLTR*GRAARE Trigger: TTCACGCGCAGCTCTACCCAACCTGGTCAGCCCGGG...AGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CCA 90 bp | CGCAGGGCTATCACAAGGCTTCTCAGGGGGCAGGTACTGAATGCATaGCTTCTTGCTCTTAGAGGCCAGAGCACCCTCTGCCTCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RRAITRLLRGQVLNA*LLALRGQSTLCLLD Trigger: ATCCAAGAGGCAGAGGGTGCTCTGGCCTCTAAGAGCAAGAAGCCATGCATTCAGTACCTGCCCCCTGAGAAGCCTTGTGATAGCCCTGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CAA 90 bp | ACACAGGACAAACATTTGGGCGAGGGCAACAGGACTGACCTGGAGAGAAGGGTGGGGGGATTCCTGTCTTaGGGTCGATCTCTGGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: TQDKHLGEGNRTDLERRVGGFLS*GRSLGT Trigger: TGTCCCCAGAGATCGACCCAAAGACAGGAATCCCCC...CACCCTTCTCTCCAGGTCAGTCCTGTTGCCCTCGCCCAAATGTTTGTCCTGTGT 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| CDS CCA 90 bp | CTTTTTCACGTGAGGTTTCTTCTCCTCTTCCTTCTTCACCGTAACTaGGGATTTCGCACTCACTGCAGGGCTCAGGCTGGGGGCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LFHVRFLLLFLLHRN*GFRTHCRAQAGGCW Trigger: CCAGCAGCCCCCAGCCTGAGCCCTGCAGTGAGTGCGAAATCCCCAGTTACGGTGAAGAAGGAAGAGGAGAAGAAACCTCACGTGAAAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CAA 90 bp | CTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGGGCAGCTTGACCAGGGACGACTaGACCTCATCCAGATCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LNHYYLESRDSLHRTGGSLTRDD*TSSRSL Trigger: GAGGGATCTGGATGAGGTCAAGTCGTCCCTGGTCAA...GCTGCCCCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CAA 90 bp | TTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGAGACCAGGCTGGACATaGAAGCGTTCATGGCGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FPPSSPLNHYYLESRDSLRPGWT*KRSWRG Trigger: CCCTCGCCATGAACGCTTCAATGTCCAGCCTGGTCT...CAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CAA 90 bp | TGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGGGGGGATTCCTGTCTTaGGGTCGATCTCTGGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: CVSPFLSSESLLLGVPRQGGFLS*GRSLGT Trigger: TGTCCCCAGAGATCGACCCAAAGACAGGAATCCCCC...CTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
||
| CDS-3UTR CAA 90 bp | TGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGAGACCAGGCTGGACATaGAAGCGTTCATGGCGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CVSPFLSSESLLLGVPRQRPGWT*KRSWRG Trigger: CCCTCGCCATGAACGCTTCAATGTCCAGCCTGGTCT...CTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CAA 90 bp | CCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGGGCTCTTCTCTTGACAGGTaGTGCCACTTTCTTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLNHYYLESRDSLHRTGGSSLDR*CHFLPR Trigger: CCTGGGAAGAAAGTGGCACAACCTGTCAAGAGAAGA...GCCCCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CAA 90 bp | GTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCAGCACCCTCTGCCTCTaGGATTTGCTGCTGAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: VFPPSSPLNHYYLESRDSSTLCL*DLLLRL Trigger: CAGTCTCAGCAGCAAATCCAAGAGGCAGAGGGTGCT...GCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CAA 90 bp | CCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGGGCACAACAGGAACTTTGTaGGACCTGAATGTGGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PLNHYYLESRDSLHRTGGTTGTL*DLNVGG Trigger: GCCTCCCACATTCAGGTCCAACAAAGTTCCTGTTGT...GCCCCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114053.9 |
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| CDS-3UTR CAA 90 bp | TCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCTTGACCAGGGACGACTaGACCTCATCCAGATCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSPLNHYYLESRDSLHRTLTRDD*TSSRSL Trigger: GAGGGATCTGGATGAGGTCAAGTCGTCCCTGGTCAA...GGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CAA 90 bp | GGGAAAGAAAACGTGACTGGGCAGCAGAGAGGAACAGACTTCTTGAAGGCAGTGCTCTGCCTCTTGGATTaGCTGCTGAGACTGTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GKENVTGQQRGTDFLKAVLCLLD*LLRLCL Trigger: CAGACACAGTCTCAGCAGCAAATCCAAGAGGCAGAG...CACTGCCTTCAAGAAGTCTGTTCCTCTCTGCTGCCCAGTCACGTTTTCTTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| CDS-3UTR CAA 90 bp | TCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCATAGAACCGGGCTCTGCCTCTTGGATTaGCTGCTGAGACTGTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPLNHYYLESRDSLHRTGLCLLD*LLRLCL Trigger: CAGACACAGTCTCAGCAGCAAATCCAAGAGGCAGAG...CCCGGTTCTATGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CAA 90 bp | GTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCTGGCCTGTTCTTCTCTaGACAGGTTGTGCCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VFPPSSPLNHYYLESRDSWPVLL*TGCATF Trigger: GAAAGTGGCACAACCTGTCAAGAGAAGAACAGGCCA...GCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CAA 90 bp | TTTGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCACCCTCTGCCTCTaGGATTTGCTGCTGAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: FVFPPSSPLNHYYLESRDSTLCL*DLLLRL Trigger: CAGTCTCAGCAGCAAATCCAAGAGGCAGAGGGTGCT...GTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CAA 90 bp | TCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCAACAACAGGAACTTTGTaGGACAAGTGTGCTGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SPFLSSESLLLGVPRQPATTGTL*DKCAGD Trigger: ATCTCCAGCACACTTGTCCAACAAAGTTCCTGTTGT...TGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| CDS-3UTR CAA 90 bp | TCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACAGCCTGCACTTTCTTCCCAGGATTaGGTTAATGGCTGCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPFLSSESLLLGVPRQPALSSQD*VNGCTF Trigger: GAAAGTGCAGCCATTAACCAAATCCTGGGAAGAAAG...TGCAGGCTGTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS TCA 90 bp | CAGAGCACCCTCTGCCTCTTGGATTTGCTGCTGAGACTGTGTCTGTaGCAGCTGCTTTTCTCTCTTCCTCTTCTTCTTCTTCCCATAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QSTLCLLDLLLRLCL*QLLFSLPLLLLPIV Trigger: AACTATGGGAAGAAGAAGAAGAGGAAGAGAGAAAAGCAGCTGTCACAGACACAGTCTCAGCAGCAAATCCAAGAGGCAGAGGGTGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CAA 90 bp | TCCTTTGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGATCTTCTCTTGACAGGTaGTGCCACTTTCTTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SFVFPPSSPLNHYYLESRSSLDR*CHFLPR Trigger: CCTGGGAAGAAAGTGGCACAACCTGTCAAGAGAAGA...TCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACAAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CAA 90 bp | TTTGTGTTTCCCCCTTCCTCTCCTCTGAATCATTACTACTTGGAGTCCCGAGACTGGCCTGTTCTTCTCTaGACAGGTTGTGCCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FVFPPSSPLNHYYLESRDWPVLL*TGCATF Trigger: GAAAGTGGCACAACCTGTCAAGAGAAGAACAGGCCA...GTCTCGGGACTCCAAGTAGTAATGATTCAGAGGAGAGGAAGGGGGAAACACAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS-3UTR CAA 90 bp | GAAAGAAAACGTGACTGGGCAGCAGAGAGGAACAGACTTCTTGAAGGCAGTGGTCTTTCTTCCCAGGATTaGGTTAATGGCTGCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ERKRDWAAERNRLLEGSGLSSQD*VNGCTF Trigger: GAAAGTGCAGCCATTAACCAAATCCTGGGAAGAAAG...ACCACTGCCTTCAAGAAGTCTGTTCCTCTCTGCTGCCCAGTCACGTTTTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069536.12 |
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| CDS TCA 72 bp | CGCTTGCTCGGAGTGGGTAGCCGCAGGGGCAGCTGGTaGGGCCAAGGCTGCGGAGGGCGTCGCAGGGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: RLLGVGSRRGSW*GQGCGGRRRGV Trigger: GACTCCCCTGCGACGCCCTCCGCAGCCTTGGCCTCACCAGCTGCCCCTGCGGCTACCCACTCCGAGCAAGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS GCA 72 bp | GCCCGGGCCTCCGGTTTGGTGGTGAGCGACAGGGGCTaGGCTTGCTCGGAGTGGGTAGCCGCAGGGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ARASGLVVSDRG*ACSEWVAAGAA Trigger: AGCTGCCCCTGCGGCTACCCACTCCGAGCAAGCGCAGCCCCTGTCGCTCACCACCAAACCGGAGGCCCGGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CAA 72 bp | GCGGAGTGGAGAGCCAGCTGGGCCCGGGCCTCCGGTTaGGTGGTGAGCGACAGGGGCTGCGCTTGCTCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AEWRASWARASG*VVSDRGCACSE Trigger: CTCCGAGCAAGCGCAGCCCCTGTCGCTCACCACCAAACCGGAGGCCCGGGCCCAGCTGGCTCTCCACTCCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CCA 72 bp | GAGCCCAAGGGCAAGGGCCTGGATAGGAGTGGGGGCTaGCTGCCCATCTGGCTGGAGTTGCTGGCGGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: EPKGKGLDRSGG*LPIWLELLAAA Trigger: GGCGGCCGCCAGCAACTCCAGCCAGATGGGCAGCCAGCCCCCACTCCTATCCAGGCCCTTGCCCTTGGGCTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CAA 90 bp | AGGAAGGCAGCGGAGTGGAGAGCCAGCTGGGCCCGGGCCTCCGGTTaGGTGGTGAGCGACAGGGGCTGCGCTTGCTCGGAGTGGGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RKAAEWRASWARASG*VVSDRGCACSEWVA Trigger: GGCTACCCACTCCGAGCAAGCGCAGCCCCTGTCGCTCACCACCAAACCGGAGGCCCGGGCCCAGCTGGCTCTCCACTCCGCTGCCTTCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CCA 72 bp | TTAGCCGACAGGAAGGCAGCGGAGTGGAGAGCCAGCTaGGCCCGGGCCTCCGGTTTGGTGGTGAGCGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: LADRKAAEWRAS*ARASGLVVSDR Trigger: CCTGTCGCTCACCACCAAACCGGAGGCCCGGGCCCAGCTGGCTCTCCACTCCGCTGCCTTCCTGTCGGCTAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CCA 72 bp | AAGGGCCTGGATAGGAGTGGGGGCTGGCTGCCCATCTaGCTGGAGTTGCTGGCGGCCGCCTTAGCCGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: KGLDRSGGWLPI*LELLAAALADR Trigger: CCTGTCGGCTAAGGCGGCCGCCAGCAACTCCAGCCAGATGGGCAGCCAGCCCCCACTCCTATCCAGGCCCTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CAA 90 bp | AAGGGCCTGGATAGGAGTGGGGGCTGGCTGCCCATCTGGCTGGAGTaGCTGGCGGCCGCCTTAGCCGACAGGAAGGCAGCGGAGTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: KGLDRSGGWLPIWLE*LAAALADRKAAEWR Trigger: TCTCCACTCCGCTGCCTTCCTGTCGGCTAAGGCGGCCGCCAGCAACTCCAGCCAGATGGGCAGCCAGCCCCCACTCCTATCCAGGCCCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS GCA 72 bp | CCAAGGCTGCGGAGGGCGTCGCAGGGGAGTCCAGCGTaGTGCCATGGGAAGACGCAGGGCTATCACAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PRLRRASQGSPA*CHGKTQGYHKA Trigger: AGCCTTGTGATAGCCCTGCGTCTTCCCATGGCAGCACGCTGGACTCCCCTGCGACGCCCTCCGCAGCCTTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CCA 72 bp | GCGGAGGGCGTCGCAGGGGAGTCCAGCGTGCTGCCATaGGAAGACGCAGGGCTATCACAAGGCTTCTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: AEGVAGESSVLP*EDAGLSQGFSG Trigger: CCCTGAGAAGCCTTGTGATAGCCCTGCGTCTTCCCATGGCAGCACGCTGGACTCCCCTGCGACGCCCTCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS GCA 72 bp | AGGCTGCGGAGGGCGTCGCAGGGGAGTCCAGCGTGCTaGCATGGGAAGACGCAGGGCTATCACAAGGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RLRRASQGSPAC*HGKTQGYHKAS Trigger: AGAAGCCTTGTGATAGCCCTGCGTCTTCCCATGGCAGCACGCTGGACTCCCCTGCGACGCCCTCCGCAGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CCA 72 bp | AAGGATGCCGGAAACCACCCGGAGGGAGAGAGTACATaGGCTGCCCTTGCTGTGGGACGAGCCAGCCGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: KDAGNHPEGEST*AALAVGRASRG Trigger: CCCTCGGCTGGCTCGTCCCACAGCAAGGGCAGCCCATGTACTCTCTCCCTCCGGGTGGTTTCCGGCATCCTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CCA 72 bp | GCAGGGTGGGGGATTCCTGAGGTGGGCAGACCAGGATaGGCAGGAGCCACCATGTGTGGGAACCGGCTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: AGWGIPEVGRPG*AGATMCGNRLE Trigger: CTCAAGCCGGTTCCCACACATGGTGGCTCCTGCCCATCCTGGTCTGCCCACCTCAGGAATCCCCCACCCTGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CCA 72 bp | AAGGAAAGAGGCTGGGCCTGTAGCACGGGGAGGGCCTaGTGGGCATGGAGCGTAGCTGGGAAAGTAGGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: KERGWACSTGRA*WAWSVAGKVGG Trigger: TCCCCCTACTTTCCCAGCTACGCTCCATGCCCACCAGGCCCTCCCCGTGCTACAGGCCCAGCCTCTTTCCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS TCA 72 bp | GGGCGCCTCTCCGCCTCGGAGTCCGAGCTACTGCTCTaGTTCTCCGATTCGTTGACCAGGGACGACTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: GRLSASESELLL*FSDSLTRDDLT Trigger: GGTCAAGTCGTCCCTGGTCAACGAATCGGAGAATCAGAGCAGTAGCTCGGACTCCGAGGCGGAGAGGCGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CCA 72 bp | GGTAGGTGCGCGCTCCACCAGGAGACAGGGGTCCGTTaGAGAGGTACGGGCTGCTCAGGTCTGGAATCATCA | + |
|
Preference number: 6 (lower is better) Translates to: GRCALHQETGVR*RGTGCSGLESS Trigger: TGATGATTCCAGACCTGAGCAGCCCGTACCTCTCCAACGGACCCCTGTCTCCTGGTGGAGCGCGCACCTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 ENSMUST00000149446.3 |
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| CDS GCA 72 bp | TTGACCAGGGACGACTTGACCTCATCCAGATCCCTCTaGGCCGAAGCGCTGTCGCTGCTCGGCTCTTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LTRDDLTSSRSL*AEALSLLGSCS Trigger: AGAGCAAGAGCCGAGCAGCGACAGCGCTTCGGCGCAGAGGGATCTGGATGAGGTCAAGTCGTCCCTGGTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS GCA 72 bp | CACCAGGAGACAGGGGTCCGTTGGAGAGGTACGGGCTaGTCAGGTCTGGAATCATCAGGAAGGGGTACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: HQETGVRWRGTG*SGLESSGRGTQ Trigger: CTGGGTACCCCTTCCTGATGATTCCAGACCTGAGCAGCCCGTACCTCTCCAACGGACCCCTGTCTCCTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 ENSMUST00000149446.3 |
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| CDS CCA 72 bp | CAGGGGTCCGTTGGAGAGGTACGGGCTGCTCAGGTCTaGAATCATCAGGAAGGGGTACCCAGGATACGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QGSVGEVRAAQV*NHQEGVPRIRR Trigger: CCTGCGTATCCTGGGTACCCCTTCCTGATGATTCCAGACCTGAGCAGCCCGTACCTCTCCAACGGACCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 ENSMUST00000149446.3 |
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| CDS CCA 72 bp | ACCGGCTTGAGACCAGGCTGGACATTGAAGCGTTCATaGCGAGGGCAGGGTAAGGATGCCGGAAACCACCCG | + |
|
Preference number: 6 (lower is better) Translates to: TGLRPGWTLKRS*RGQGKDAGNHP Trigger: CGGGTGGTTTCCGGCATCCTTACCCTGCCCTCGCCATGAACGCTTCAATGTCCAGCCTGGTCTCAAGCCGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CAA 72 bp | CCATGTGTGGGAACCGGCTTGAGACCAGGCTGGACATaGAAGCGTTCATGGCGAGGGCAGGGTAAGGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: PCVGTGLRPGWT*KRSWRGQGKDA Trigger: GGCATCCTTACCCTGCCCTCGCCATGAACGCTTCAATGTCCAGCCTGGTCTCAAGCCGGTTCCCACACATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CAA 72 bp | CAGGATGGGCAGGAGCCACCATGTGTGGGAACCGGCTaGAGACCAGGCTGGACATTGAAGCGTTCATGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: QDGQEPPCVGTG*RPGWTLKRSWR Trigger: TCGCCATGAACGCTTCAATGTCCAGCCTGGTCTCAAGCCGGTTCCCACACATGGTGGCTCCTGCCCATCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CCA 72 bp | CCAACGGGCAGGATCCCCATACAAGTGTGCTGGAGATaGCGACCTTGTGTCCTTGACTGTAGCACTGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PTGRIPIQVCWR*RPCVLDCSTGG Trigger: CCCTCCAGTGCTACAGTCAAGGACACAAGGTCGCCATCTCCAGCACACTTGTATGGGGATCCTGCCCGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114053.9 |
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| CDS CAA 72 bp | TTGGACAAGTGTGCTGGAGATGGCGACCTTGTGTCCTaGACTGTAGCACTGGAGGGGACATCGAGGAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LDKCAGDGDLVS*TVALEGTSRRG Trigger: GCCCCTCCTCGATGTCCCCTCCAGTGCTACAGTCAAGGACACAAGGTCGCCATCTCCAGCACACTTGTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000149446.3 |
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| CDS CAA 72 bp | CCATACAAGTGTGCTGGAGATGGCGACCTTGTGTCCTaGACTGTAGCACTGGAGGGGACATCGAGGAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PYKCAGDGDLVS*TVALEGTSRRG Trigger: GCCCCTCCTCGATGTCCCCTCCAGTGCTACAGTCAAGGACACAAGGTCGCCATCTCCAGCACACTTGTATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114053.9 |
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| CDS GCA 72 bp | AGGCACCATCCAACGGGCAGGATCCCCATACAAGTGTaGTGGAGATGGCGACCTTGTGTCCTTGACTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: RHHPTGRIPIQV*WRWRPCVLDCS Trigger: GCTACAGTCAAGGACACAAGGTCGCCATCTCCAGCACACTTGTATGGGGATCCTGCCCGTTGGATGGTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114053.9 |
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| CDS CCA 72 bp | GTGAGGTTTCTTCTCCTCTTCCTTCTTCACCGTAACTaGGGATTTCGCACTCACTGCAGGGCTCAGGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VRFLLLFLLHRN*GFRTHCRAQAG Trigger: CCCAGCCTGAGCCCTGCAGTGAGTGCGAAATCCCCAGTTACGGTGAAGAAGGAAGAGGAGAAGAAACCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CCA 72 bp | ATCACAAGGCTTCTCAGGGGGCAGGTACTGAATGCATaGCTTCTTGCTCTTAGAGGCCAGAGCACCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ITRLLRGQVLNA*LLALRGQSTLC Trigger: GCAGAGGGTGCTCTGGCCTCTAAGAGCAAGAAGCCATGCATTCAGTACCTGCCCCCTGAGAAGCCTTGTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CCA 72 bp | CACCATCCAACGGGCAGGATCCCCATACAAGTGTGCTaGAGATGGCGACCTTGTGTCCTTGACTGTAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: HHPTGRIPIQVC*RWRPCVLDCST Trigger: AGTGCTACAGTCAAGGACACAAGGTCGCCATCTCCAGCACACTTGTATGGGGATCCTGCCCGTTGGATGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114053.9 |
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| CDS CAA 90 bp | GGAACTTTGTTGGACAAGTGTGCTGGAGATGGCGACCTTGTGTCCTaGACTGTAGCACTGGAGGGGACATCGAGGAGGGGCCATTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: GTLLDKCAGDGDLVS*TVALEGTSRRGHFI Trigger: GATGAAATGGCCCCTCCTCGATGTCCCCTCCAGTGCTACAGTCAAGGACACAAGGTCGCCATCTCCAGCACACTTGTCCAACAAAGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000149446.3 |
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| CDS GCA 72 bp | GTTGTGCCACTTTCTTCCCAGGATTTGGTTAATGGCTaGACTTTCCTTCAGGGTACACTCGGCCACCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: VVPLSSQDLVNG*TFLQGTLGHHL Trigger: AAGGTGGTGGCCGAGTGTACCCTGAAGGAAAGTGCAGCCATTAACCAAATCCTGGGAAGAAAGTGGCACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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| CDS CCA 72 bp | AACAACAGGAACTTTGTTGGACAAGTGTGCTGGAGATaGCGACCTTGTGTCCTTGACTGTAGCACTGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: NNRNFVGQVCWR*RPCVLDCSTGG Trigger: CCCTCCAGTGCTACAGTCAAGGACACAAGGTCGCCATCTCCAGCACACTTGTCCAACAAAGTTCCTGTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000149446.3 |
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| CDS TCA 72 bp | CTCTGCCTCTTGGATTTGCTGCTGAGACTGTGTCTGTaGCAGCTGCTTTTCTCTCTTCCTCTTCTTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LCLLDLLLRLCL*QLLFSLPLLLL Trigger: AAGAAGAAGAAGAGGAAGAGAGAAAAGCAGCTGTCACAGACACAGTCTCAGCAGCAAATCCAAGAGGCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069536.12 ENSMUST00000114053.9 |
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