Pregenerated sensors for TCF7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000782Ensembl transcript IDs: ENSMUST00000086844.10, ENSMUST00000109071.3, ENSMUST00000238914.2
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGGAGCTGGTCATGTTGCCTCCTCCTGAGTTAGGGGTGGGCCCCTaGAGCAAGCCAGGTGTTCTGTGCCTAGCAACCAAGGCTGTTAGG | + |
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Preference number: 1 (lower is better) Translates to: WELVMLPPPELGVGP*SKPGVLCLATKAVR Trigger: CCTAACAGCCTTGGTTGCTAGGCACAGAACACCTGGCTTGCTCCAGGGGCCCACCCCTAACTCAGGAGGAGGCAACATGACCAGCTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| 3UTR GCA 90 bp | CCTCCTGAGTTAGGGGTGGGCCCCTGGAGCAAGCCAGGTGTTCTGTaGCTAGCAACCAAGGCTGTTAGGCTGCCTGTCTCTGAGATTCTT | + |
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Preference number: 1 (lower is better) Translates to: PPELGVGPWSKPGVL*LATKAVRLPVSEIL Trigger: AAGAATCTCAGAGACAGGCAGCCTAACAGCCTTGGTTGCTAGGCACAGAACACCTGGCTTGCTCCAGGGGCCCACCCCTAACTCAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| 3UTR CCA 90 bp | GGGGTTTGCCCTCTCACAGCTGCCCAGGAGCTGACTCAGATGAGCTaGAAATGGAACTGGGAAGAGCCTGATAGGAAGGGTGCACACTGG | + |
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Preference number: 1 (lower is better) Translates to: GVCPLTAAQELTQMS*KWNWEEPDRKGAHW Trigger: CCAGTGTGCACCCTTCCTATCAGGCTCTTCCCAGTTCCATTTCCAGCTCATCTGAGTCAGCTCCTGGGCAGCTGTGAGAGGGCAAACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR CCA 90 bp | GAAACTGAAGCTGGCCGGTTCTCAATGCTGATAGGCTCTGGCTGTTaGGGGTTTGGGGTTTGCCCTCTCACAGCTGCCCAGGAGCTGACT | + |
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Preference number: 1 (lower is better) Translates to: ETEAGRFSMLIGSGC*GFGVCPLTAAQELT Trigger: AGTCAGCTCCTGGGCAGCTGTGAGAGGGCAAACCCCAAACCCCCAACAGCCAGAGCCTATCAGCATTGAGAACCGGCCAGCTTCAGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR TCA 90 bp | GTTGAAAGGCCTAAACGTATCCTAGTCCCTCCTCTTGCAAGCGCCTaGGAACACAGGGAGCCGCTTCCTCCGGCCCAGCTTATGAACAGC | + |
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Preference number: 1 (lower is better) Translates to: VERPKRILVPPLASA*EHREPLPPAQLMNS Trigger: GCTGTTCATAAGCTGGGCCGGAGGAAGCGGCTCCCTGTGTTCTCAGGCGCTTGCAAGAGGAGGGACTAGGATACGTTTAGGCCTTTCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR GCA 90 bp | GATAGGCTCTGGCTGTTGGGGGTTTGGGGTTTGCCCTCTCACAGCTaGCCAGGAGCTGACTCAGATGAGCTGGAAATGGAACTGGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: DRLWLLGVWGLPSHS*PGADSDELEMELGR Trigger: TCTTCCCAGTTCCATTTCCAGCTCATCTGAGTCAGCTCCTGGGCAGCTGTGAGAGGGCAAACCCCAAACCCCCAACAGCCAGAGCCTATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR TCA 90 bp | GAGGGTGTGGCAGAGGGCAGGAGAAGCATTTGTAGGGTAGGCAGCTaGAGAGATCAGTCCAACCCATCTGACCTACAGCAAACAAAACCT | + |
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Preference number: 1 (lower is better) Translates to: EGVAEGRRSICRVGS*RDQSNPSDLQQTKP Trigger: AGGTTTTGTTTGCTGTAGGTCAGATGGGTTGGACTGATCTCTTCAGCTGCCTACCCTACAAATGCTTCTCCTGCCCTCTGCCACACCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| 3UTR GCA 90 bp | ACAGAGGTCCCCCTGCCTCTATCTCGCAAGTGCTGGGGTTATAGGTaGACACTACCACACTTGGCCAGACTTTCTCAAGACTTTCAACAC | + |
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Preference number: 1 (lower is better) Translates to: TEVPLPLSRKCWGYR*TLPHLARLSQDFQH Trigger: GTGTTGAAAGTCTTGAGAAAGTCTGGCCAAGTGTGGTAGTGTGCACCTATAACCCCAGCACTTGCGAGATAGAGGCAGGGGGACCTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR GCA 90 bp | GTTGTCTTGGAATTCACAGAGGTCCCCCTGCCTCTATCTCGCAAGTaGTGGGGTTATAGGTGCACACTACCACACTTGGCCAGACTTTCT | + |
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Preference number: 1 (lower is better) Translates to: VVLEFTEVPLPLSRK*WGYRCTLPHLARLS Trigger: AGAAAGTCTGGCCAAGTGTGGTAGTGTGCACCTATAACCCCAGCACTTGCGAGATAGAGGCAGGGGGACCTCTGTGAATTCCAAGACAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR GCA 90 bp | TCTTCTATACAGCCCTGGTTGTCTTGGAATTCACAGAGGTCCCCCTaGCTCTATCTCGCAAGTGCTGGGGTTATAGGTGCACACTACCAC | + |
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Preference number: 1 (lower is better) Translates to: SSIQPWLSWNSQRSP*LYLASAGVIGAHYH Trigger: GTGGTAGTGTGCACCTATAACCCCAGCACTTGCGAGATAGAGGCAGGGGGACCTCTGTGAATTCCAAGACAACCAGGGCTGTATAGAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR CCA 90 bp | GTCTTGGAATTCACAGAGGTCCCCCTGCCTCTATCTCGCAAGTGCTaGGGTTATAGGTGCACACTACCACACTTGGCCAGACTTTCTCAA | + |
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Preference number: 1 (lower is better) Translates to: VLEFTEVPLPLSRKC*GYRCTLPHLARLSQ Trigger: TTGAGAAAGTCTGGCCAAGTGTGGTAGTGTGCACCTATAACCCCAGCACTTGCGAGATAGAGGCAGGGGGACCTCTGTGAATTCCAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR TCA 90 bp | CTTGCTTTAGTAGTAACATTTCTTCCTGCAGCCCCACAGAGAAACTaGAGCTGGCCGGTTCTCAATGCTGATAGGCTCTGGCTGTTGGGG | + |
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Preference number: 1 (lower is better) Translates to: LALVVTFLPAAPQRN*SWPVLNADRLWLLG Trigger: CCCCAACAGCCAGAGCCTATCAGCATTGAGAACCGGCCAGCTTCAGTTTCTCTGTGGGGCTGCAGGAAGAAATGTTACTACTAAAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR GCA 90 bp | GTGGCAAGGAACCATGTCCACCACAGAGAGGTTTTATGGGTTCCTTaGTTTAGTAGTAACATTTCTTCCTGCAGCCCCACAGAGAAACTG | + |
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Preference number: 1 (lower is better) Translates to: VARNHVHHREVLWVP*FSSNISSCSPTEKL Trigger: CAGTTTCTCTGTGGGGCTGCAGGAAGAAATGTTACTACTAAAGCAAGGAACCCATAAAACCTCTCTGTGGTGGACATGGTTCCTTGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR CCA 90 bp | ACAGAACTTCTCGGTTTAAGAGAGAAGCATTATTGTTTAGACTTGTaGCTGGTTGACCACAGAGTTATTTTGTGTGACAAACCAGGTATT | + |
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Preference number: 1 (lower is better) Translates to: TELLGLREKHYCLDL*LVDHRVILCDKPGI Trigger: AATACCTGGTTTGTCACACAAAATAACTCTGTGGTCAACCAGCCACAAGTCTAAACAATAATGCTTCTCTCTTAAACCGAGAAGTTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGTTGGGGGTTTGGGGTTTGCCCTCTCACAGCTGCCCAGGAGCTGACTCATGGTGCTGGCTCCACTaGGCTAGCAAGCAGTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: WLLGVWGLPSHSCPGADSWCWLH*ASKQFC Trigger: ACAGAACTGCTTGCTAGCCCAGTGGAGCCAGCACCA...TGAGTCAGCTCCTGGGCAGCTGTGAGAGGGCAAACCCCAAACCCCCAACAGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTTGCAAGCGCCTGAGAACACAGGGAGCCGCTTCCTCCGGCCCAGCTTATCAAGAAGTATTGGCATaGGGAGGGTGTGGCAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: SSCKRLRTQGAASSGPAYQEVLA*GGCGRG Trigger: CCCTCTGCCACACCCTCCCCATGCCAATACTTCTTG...ATAAGCTGGGCCGGAGGAAGCGGCTCCCTGTGTTCTCAGGCGCTTGCAAGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR CAA 90 bp | CCGGTTCTCAATGCTGATAGGCTCTGGCTGTTGGGGGTTTGGGGTTaGCCCTCTCACAGCTGCCCAGGAGCTGACTCAGATGAGCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: PVLNADRLWLLGVWG*PSHSCPGADSDELE Trigger: TTCCAGCTCATCTGAGTCAGCTCCTGGGCAGCTGTGAGAGGGCAAACCCCAAACCCCCAACAGCCAGAGCCTATCAGCATTGAGAACCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR-3UTR CCA 90 bp | CCATGGGAGCTGGTCATGTTGCCTCCTCCTGAGTTAGGGGTGGGCCCCTGGAGCTTGTTGCTGTATCTGTaGATTCTGGAGGGTGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: PWELVMLPPPELGVGPWSLLLYL*ILEGAV Trigger: CACAGCACCCTCCAGAATCCACAGATACAGCAACAA...GCTCCAGGGGCCCACCCCTAACTCAGGAGGAGGCAACATGACCAGCTCCCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| 3UTR-3UTR CCA 90 bp | GGTTCAGGGAGTTGTGCAGCCTTTGAAATCTTCATCACCTTAAGAGGACCCCTATACGAGGGTGAGTCCTaGGGAGCTGGGGACCGGGGA | + |
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Preference number: 2 (lower is better) Translates to: GSGSCAAFEIFITLRGPLYEGES*GAGDRG Trigger: TCCCCGGTCCCCAGCTCCCCAGGACTCACCCTCGTA...TAGGGGTCCTCTTAAGGTGATGAAGATTTCAAAGGCTGCACAACTCCCTGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| 3UTR-3UTR CCA 90 bp | AGGCGGCAGGATCCCCTTAAGATGATACATCTACATAGATCTAATCCCCCACCTTACGAGGGTGAGTCCTaGGGAGCTGGGGACCGGGGA | + |
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Preference number: 2 (lower is better) Translates to: RRQDPLKMIHLHRSNPPPYEGES*GAGDRG Trigger: TCCCCGGTCCCCAGCTCCCCAGGACTCACCCTCGTA...AGGTGGGGGATTAGATCTATGTAGATGTATCATCTTAAGGGGATCCTGCCGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| 3UTR-3UTR TCA 90 bp | AGGCGGCAGGATCCCCTTAAGATGATACATCTACATAGATCTAATCCCCCACCTCATGTTGCCTCCTCCTaGGTTAGGGGTGGGCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: RRQDPLKMIHLHRSNPPPHVASS*VRGGPL Trigger: CAGGGGCCCACCCCTAACTCAGGAGGAGGCAACATG...AGGTGGGGGATTAGATCTATGTAGATGTATCATCTTAAGGGGATCCTGCCGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| 3UTR-3UTR GCA 90 bp | CTCAATGCTGATAGGCTCTGGCTGTTGGGGGTTTGGGGTTTGCCCTCTCACAGCCCAAGGCTGTTAGGCTaGCTGTCTCTGAGATTCTTG | + |
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Preference number: 2 (lower is better) Translates to: LNADRLWLLGVWGLPSHSPRLLG*LSLRFL Trigger: CAAGAATCTCAGAGACAGGCAGCCTAACAGCCTTGG...GCTGTGAGAGGGCAAACCCCAAACCCCCAACAGCCAGAGCCTATCAGCATTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR-3UTR TCA 90 bp | AGGCGGCAGGATCCCCTTAAGATGATACATCTACATAGATCTAATCCCCCACCTCAGAAGATACGAGGGTaGGTCCTGGGGAGCTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: RRQDPLKMIHLHRSNPPPQKIRG*VLGSWG Trigger: TCCCCAGCTCCCCAGGACTCACCCTCGTATCTTCTG...AGGTGGGGGATTAGATCTATGTAGATGTATCATCTTAAGGGGATCCTGCCGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| 3UTR-3UTR CCA 90 bp | AACATTTCTTCCTGCAGCCCCACAGAGAAACTGAAGCTGGCCGGTTCTCAATGCATAGGCTCTGGCTGTTaGGGGTTTGGGGTTTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: NISSCSPTEKLKLAGSQCIGSGC*GFGVCP Trigger: AGGGCAAACCCCAAACCCCCAACAGCCAGAGCCTAT...GCATTGAGAACCGGCCAGCTTCAGTTTCTCTGTGGGGCTGCAGGAAGAAATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR-3UTR CCA 90 bp | GTTCTGTGCCTAGCAACCAAGGCTGTTAGGCTGCCTGTCTCTGAGATTCTTGTTTTCTGGAGGGTGCTGTaGGGGGTCTTTGGAGACTTA | + |
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Preference number: 2 (lower is better) Translates to: VLCLATKAVRLPVSEILVFWRVL*GVFGDL Trigger: TAAGTCTCCAAAGACCCCCCACAGCACCCTCCAGAA...AACAAGAATCTCAGAGACAGGCAGCCTAACAGCCTTGGTTGCTAGGCACAGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| 3UTR-3UTR CCA 90 bp | AGGCGGCAGGATCCCCTTAAGATGATACATCTACATAGATCTAATCCCCCACCTTGGTTCCATGGGAGCTaGTCATGTTGCCTCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: RRQDPLKMIHLHRSNPPPWFHGS*SCCLLL Trigger: CAGGAGGAGGCAACATGACCAGCTCCCATGGAACCA...AGGTGGGGGATTAGATCTATGTAGATGTATCATCTTAAGGGGATCCTGCCGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| 3UTR-3UTR CCA 90 bp | GCTTCCTCCGGCCCAGCTTATGAACAGCAGCTGGTTTTTGTAAACAGAACTTCTTGGTCCAAGAAGTATTaGCATGGGGAGGGTGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: ASSGPAYEQQLVFVNRTSWSKKY*HGEGVA Trigger: TGCCACACCCTCCCCATGCCAATACTTCTTGGACCA...AGAAGTTCTGTTTACAAAAACCAGCTGCTGTTCATAAGCTGGGCCGGAGGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR-3UTR TCA 90 bp | TGTCAGAGGCGGCAGGATCCCCTTAAGATGATACATCTACATAGATCTAATCCCGAGTTGTGCAGCCTTTaGAATCTTCATCACCTTAAG | + |
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Preference number: 2 (lower is better) Translates to: CQRRQDPLKMIHLHRSNPELCSL*NLHHLK Trigger: CTTAAGGTGATGAAGATTTCAAAGGCTGCACAACTC...GGGATTAGATCTATGTAGATGTATCATCTTAAGGGGATCCTGCCGCCTCTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| 3UTR-3UTR CAA 90 bp | CCATGGGAGCTGGTCATGTTGCCTCCTCCTGAGTTAGGGGTGGGCCCCTGGAGCAGCGACCTGAGAATGTaGGTGCTGGCTCCACTGGGC | + |
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Preference number: 3 (lower is better) Translates to: PWELVMLPPPELGVGPWSSDLRM*VLAPLG Trigger: GCCCAGTGGAGCCAGCACCAACATTCTCAGGTCGCT...GCTCCAGGGGCCCACCCCTAACTCAGGAGGAGGCAACATGACCAGCTCCCATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| 3UTR CCA 72 bp | GCTGGCCGGTTCTCAATGCTGATAGGCTCTGGCTGTTaGGGGTTTGGGGTTTGCCCTCTCACAGCTGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: AGRFSMLIGSGC*GFGVCPLTAAQ Trigger: CTGGGCAGCTGTGAGAGGGCAAACCCCAAACCCCCAACAGCCAGAGCCTATCAGCATTGAGAACCGGCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR TCA 72 bp | CCTAAACGTATCCTAGTCCCTCCTCTTGCAAGCGCCTaGGAACACAGGGAGCCGCTTCCTCCGGCCCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: PKRILVPPLASA*EHREPLPPAQL Trigger: AAGCTGGGCCGGAGGAAGCGGCTCCCTGTGTTCTCAGGCGCTTGCAAGAGGAGGGACTAGGATACGTTTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR GCA 72 bp | TTAGGGGTGGGCCCCTGGAGCAAGCCAGGTGTTCTGTaGCTAGCAACCAAGGCTGTTAGGCTGCCTGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: LGVGPWSKPGVL*LATKAVRLPVS Trigger: AGAGACAGGCAGCCTAACAGCCTTGGTTGCTAGGCACAGAACACCTGGCTTGCTCCAGGGGCCCACCCCTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| 3UTR CCA 72 bp | GTCATGTTGCCTCCTCCTGAGTTAGGGGTGGGCCCCTaGAGCAAGCCAGGTGTTCTGTGCCTAGCAACCAAG | + |
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Preference number: 3 (lower is better) Translates to: VMLPPPELGVGP*SKPGVLCLATK Trigger: CTTGGTTGCTAGGCACAGAACACCTGGCTTGCTCCAGGGGCCCACCCCTAACTCAGGAGGAGGCAACATGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| 3UTR GCA 72 bp | TGGCTGTTGGGGGTTTGGGGTTTGCCCTCTCACAGCTaGCCAGGAGCTGACTCAGATGAGCTGGAAATGGAA | + |
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Preference number: 3 (lower is better) Translates to: WLLGVWGLPSHS*PGADSDELEME Trigger: TTCCATTTCCAGCTCATCTGAGTCAGCTCCTGGGCAGCTGTGAGAGGGCAAACCCCAAACCCCCAACAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR-3UTR CAA 90 bp | AACATTTCTTCCTGCAGCCCCACAGAGAAACTGAAGCTGGCCGGTTCTCAATGCAGCGACCTGAGAATGTaGGTGCTGGCTCCACTGGGC | + |
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Preference number: 3 (lower is better) Translates to: NISSCSPTEKLKLAGSQCSDLRM*VLAPLG Trigger: GCCCAGTGGAGCCAGCACCAACATTCTCAGGTCGCT...GCATTGAGAACCGGCCAGCTTCAGTTTCTCTGTGGGGCTGCAGGAAGAAATGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR GCA 72 bp | GAATTCACAGAGGTCCCCCTGCCTCTATCTCGCAAGTaGTGGGGTTATAGGTGCACACTACCACACTTGGCC | + |
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Preference number: 3 (lower is better) Translates to: EFTEVPLPLSRK*WGYRCTLPHLA Trigger: GGCCAAGTGTGGTAGTGTGCACCTATAACCCCAGCACTTGCGAGATAGAGGCAGGGGGACCTCTGTGAATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR GCA 72 bp | CAGCCCTGGTTGTCTTGGAATTCACAGAGGTCCCCCTaGCTCTATCTCGCAAGTGCTGGGGTTATAGGTGCA | + |
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Preference number: 3 (lower is better) Translates to: QPWLSWNSQRSP*LYLASAGVIGA Trigger: TGCACCTATAACCCCAGCACTTGCGAGATAGAGGCAGGGGGACCTCTGTGAATTCCAAGACAACCAGGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR CCA 72 bp | GCCCAGGAGCTGACTCAGATGAGCTGGAAATGGAACTaGGAAGAGCCTGATAGGAAGGGTGCACACTGGGTT | + |
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Preference number: 3 (lower is better) Translates to: AQELTQMSWKWN*EEPDRKGAHWV Trigger: AACCCAGTGTGCACCCTTCCTATCAGGCTCTTCCCAGTTCCATTTCCAGCTCATCTGAGTCAGCTCCTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR CCA 72 bp | ACAGCTGCCCAGGAGCTGACTCAGATGAGCTGGAAATaGAACTGGGAAGAGCCTGATAGGAAGGGTGCACAC | + |
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Preference number: 3 (lower is better) Translates to: TAAQELTQMSWK*NWEEPDRKGAH Trigger: GTGTGCACCCTTCCTATCAGGCTCTTCCCAGTTCCATTTCCAGCTCATCTGAGTCAGCTCCTGGGCAGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR CCA 72 bp | CCTCTCACAGCTGCCCAGGAGCTGACTCAGATGAGCTaGAAATGGAACTGGGAAGAGCCTGATAGGAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: PLTAAQELTQMS*KWNWEEPDRKG Trigger: ACCCTTCCTATCAGGCTCTTCCCAGTTCCATTTCCAGCTCATCTGAGTCAGCTCCTGGGCAGCTGTGAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR CCA 72 bp | TTCACAGAGGTCCCCCTGCCTCTATCTCGCAAGTGCTaGGGTTATAGGTGCACACTACCACACTTGGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: FTEVPLPLSRKC*GYRCTLPHLAR Trigger: TCTGGCCAAGTGTGGTAGTGTGCACCTATAACCCCAGCACTTGCGAGATAGAGGCAGGGGGACCTCTGTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR TCA 72 bp | GAGAACACAGGGAGCCGCTTCCTCCGGCCCAGCTTATaGACAGCAGCTGGTTTTTGTAAACAGAACTTCTCG | + |
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Preference number: 3 (lower is better) Translates to: ENTGSRFLRPSL*TAAGFCKQNFS Trigger: CGAGAAGTTCTGTTTACAAAAACCAGCTGCTGTTCATAAGCTGGGCCGGAGGAAGCGGCTCCCTGTGTTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR TCA 72 bp | ATTGATGGCCCCTGGTTCAGGGAGTTGTGCAGCCTTTaGAATCTTCATCACCTTAAGAGGACCCCTAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: IDGPWFRELCSL*NLHHLKRTPSW Trigger: CCAGCTAGGGGTCCTCTTAAGGTGATGAAGATTTCAAAGGCTGCACAACTCCCTGAACCAGGGGCCATCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| 3UTR TCA 72 bp | GTAGTAACATTTCTTCCTGCAGCCCCACAGAGAAACTaGAGCTGGCCGGTTCTCAATGCTGATAGGCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: VVTFLPAAPQRN*SWPVLNADRLW Trigger: CCAGAGCCTATCAGCATTGAGAACCGGCCAGCTTCAGTTTCTCTGTGGGGCTGCAGGAAGAAATGTTACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR TCA 72 bp | GATATGGCTGTCAGAGGCGGCAGGATCCCCTTAAGATaGTACATCTACATAGATCTAATCCCCCACCTCTTG | + |
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Preference number: 3 (lower is better) Translates to: DMAVRGGRIPLR*YIYIDLIPHLL Trigger: CAAGAGGTGGGGGATTAGATCTATGTAGATGTATCATCTTAAGGGGATCCTGCCGCCTCTGACAGCCATATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| 3UTR CCA 72 bp | TTTGAGAAAAGGTCTTCTATACAGCCCTGGTTGTCTTaGAATTCACAGAGGTCCCCCTGCCTCTATCTCGCA | + |
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Preference number: 3 (lower is better) Translates to: FEKRSSIQPWLS*NSQRSPCLYLA Trigger: TGCGAGATAGAGGCAGGGGGACCTCTGTGAATTCCAAGACAACCAGGGCTGTATAGAAGACCTTTTCTCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| 3UTR GCA 72 bp | TTATGGGTTCCTTGCTTTAGTAGTAACATTTCTTCCTaGAGCCCCACAGAGAAACTGAAGCTGGCCGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LWVPCFSSNISS*SPTEKLKLAGS Trigger: AGAACCGGCCAGCTTCAGTTTCTCTGTGGGGCTGCAGGAAGAAATGTTACTACTAAAGCAAGGAACCCATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
||
| 3UTR CCA 72 bp | GCAAGTGCTGGGGTTATAGGTGCACACTACCACACTTaGCCAGACTTTCTCAAGACTTTCAACACTACGTTA | + |
|
Preference number: 3 (lower is better) Translates to: ASAGVIGAHYHT*PDFLKTFNTTL Trigger: TAACGTAGTGTTGAAAGTCTTGAGAAAGTCTGGCCAAGTGTGGTAGTGTGCACCTATAACCCCAGCACTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
||
| 3UTR GCA 72 bp | AACCATGTCCACCACAGAGAGGTTTTATGGGTTCCTTaGTTTAGTAGTAACATTTCTTCCTGCAGCCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: NHVHHREVLWVP*FSSNISSCSPT Trigger: TGTGGGGCTGCAGGAAGAAATGTTACTACTAAAGCAAGGAACCCATAAAACCTCTCTGTGGTGGACATGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
||
| 3UTR CCA 72 bp | GTGGCAAGGAACCATGTCCACCACAGAGAGGTTTTATaGGTTCCTTGCTTTAGTAGTAACATTTCTTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: VARNHVHHREVL*VPCFSSNISSC Trigger: GCAGGAAGAAATGTTACTACTAAAGCAAGGAACCCATAAAACCTCTCTGTGGTGGACATGGTTCCTTGCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
||
| 3UTR CCA 72 bp | CTCGGTTTAAGAGAGAAGCATTATTGTTTAGACTTGTaGCTGGTTGACCACAGAGTTATTTTGTGTGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: LGLREKHYCLDL*LVDHRVILCDK Trigger: TTTGTCACACAAAATAACTCTGTGGTCAACCAGCCACAAGTCTAAACAATAATGCTTCTCTCTTAAACCGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
||
| CDS-3UTR TCA 90 bp | GGGGTGGGCCCCTGGAGCAAGCCAGGTGTTCTGTGCCTAGCAACCAAGGCTGTTCAGCTCCTGCTTCCCTaGGGAGGGCACAATGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GVGPWSKPGVLCLATKAVQLLLP*GGHNGR Trigger: CCGGCCATTGTGCCCTCCTCAGGGAAGCAGGAGCTG...AACAGCCTTGGTTGCTAGGCACAGAACACCTGGCTTGCTCCAGGGGCCCACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR GCA 90 bp | CCATGGGAGCTGGTCATGTTGCCTCCTCCTGAGTTAGGGGTGGGCCCCTGGAGCGCTGATGTCCGCTGGTaGAGGGGTGGGGTGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PWELVMLPPPELGVGPWSADVRW*RGGVWT Trigger: AGTCCACACCCCACCCCTGCACCAGCGGACATCAGC...GCTCCAGGGGCCCACCCCTAACTCAGGAGGAGGCAACATGACCAGCTCCCATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR CCA 90 bp | CCATGGGAGCTGGTCATGTTGCCTCCTCCTGAGTTAGGGGTGGGCCCCTGGAGCTGGCCGGGTGAGGGATaGCTGCTGGGTGTCCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PWELVMLPPPELGVGPWSWPGEG*LLGVQV Trigger: TACCTGGACACCCAGCAGCCATCCCTCACCCGGCCA...GCTCCAGGGGCCCACCCCTAACTCAGGAGGAGGCAACATGACCAGCTCCCATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR CCA 90 bp | CGACCTGAGAATGTTGGTGCTGGCTCCACTGGGCTAGCAAGCAGTTCTGTGGGGCGGAAGGAACGGGGCTaGGGCAGCGGCCTTCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RPENVGAGSTGLASSSVGRKERG*GSGLLR Trigger: CCGGAGAAGGCCGCTGCCCCAGCCCCGTTCCTTCCG...CCCCACAGAACTGCTTGCTAGCCCAGTGGAGCCAGCACCAACATTCTCAGGTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR TCA 90 bp | TCCTCTTGCAAGCGCCTGAGAACACAGGGAGCCGCTTCCTCCGGCCCAGCTTATCAGCTCCTGCTTCCCTaGGGAGGGCACAATGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSCKRLRTQGAASSGPAYQLLLP*GGHNGR Trigger: CCGGCCATTGTGCCCTCCTCAGGGAAGCAGGAGCTG...ATAAGCTGGGCCGGAGGAAGCGGCTCCCTGTGTTCTCAGGCGCTTGCAAGAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
||
| CDS-3UTR CCA 90 bp | CAAGCAGTTCTGTGGGGAAGGAGGGCAACAGAAGATACGAGGGTGAGTCCTGGGCGGAAGGAACGGGGCTaGGGCAGCGGCCTTCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QAVLWGRRATEDTRVSPGRKERG*GSGLLR Trigger: CCGGAGAAGGCCGCTGCCCCAGCCCCGTTCCTTCCG...CCCAGGACTCACCCTCGTATCTTCTGTTGCCCTCCTTCCCCACAGAACTGCTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR CCA 90 bp | GCTGGCTCCACTGGGCTAGCAAGCAGTTCTGTGGGGAAGGAGGGCAACAGAAGACTGGCTGATGTCCGCTaGTGCAGGGGTGGGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGSTGLASSSVGKEGNRRLADVR*CRGGVW Trigger: CCACACCCCACCCCTGCACCAGCGGACATCAGCCAG...TCTTCTGTTGCCCTCCTTCCCCACAGAACTGCTTGCTAGCCCAGTGGAGCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR TCA 90 bp | CGACCTGAGAATGTTGGTGCTGGCTCCACTGGGCTAGCAAGCAGTTCTGTGGGGCTCCTTGCTTCTGGCTaGTGTCCGCTGGTGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RPENVGAGSTGLASSSVGLLASG*CPLVQG Trigger: CCCCTGCACCAGCGGACATCAGCCAGAAGCAAGGAG...CCCCACAGAACTGCTTGCTAGCCCAGTGGAGCCAGCACCAACATTCTCAGGTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR TCA 90 bp | GCAGAGCGACCTGAGAATGTTGGTGCTGGCTCCACTGGGCTAGCAAGCAGTTCTGGCACAATGGCCGGGTaGGGGATGGCTGCTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AERPENVGAGSTGLASSSGTMAG*GMAAGC Trigger: ACACCCAGCAGCCATCCCTCACCCGGCCATTGTGCC...AGAACTGCTTGCTAGCCCAGTGGAGCCAGCACCAACATTCTCAGGTCGCTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR TCA 90 bp | CCATGGGAGCTGGTCATGTTGCCTCCTCCTGAGTTAGGGGTGGGCCCCTGGAGCTGGGGTGTGGACTGCTaGAATGTTCGTAGAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PWELVMLPPPELGVGPWSWGVDC*NVRRVE Trigger: CTCCACTCTACGAACATTTCAGCAGTCCACACCCCA...GCTCCAGGGGCCCACCCCTAACTCAGGAGGAGGCAACATGACCAGCTCCCATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR TCA 90 bp | CAAGCAGTTCTGTGGGGAAGGAGGGCAACAGAAGATACGAGGGTGAGTCCTGGGTCAAGGATGGGTGGGTaGACCTGGGATAGGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QAVLWGRRATEDTRVSPGSRMGG*TWDRGR Trigger: GCGCCCCCTATCCCAGGTTCACCCACCCATCCTTGA...CCCAGGACTCACCCTCGTATCTTCTGTTGCCCTCCTTCCCCACAGAACTGCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGGCCCCTGGAGCAAGCCAGGTGTTCTGTGCCTAGCAACCAAGGCTGTTGGGTATAGCTGCATGTaGAGCTGCCTTTCCTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GVGPWSKPGVLCLATKAVGYSCM*SCLSLR Trigger: CCGCAAGGAAAGGCAGCTGCACATGCAGCTATACCC...AACAGCCTTGGTTGCTAGGCACAGAACACCTGGCTTGCTCCAGGGGCCCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR CCA 90 bp | CCATGGGAGCTGGTCATGTTGCCTCCTCCTGAGTTAGGGGTGGGCCCCTGGAGCGAAATGTTCGTAGAGTaGAGAAAGCTGGGGGACGCC | + |
|
Preference number: 4 (lower is better) Translates to: PWELVMLPPPELGVGPWSEMFVE*RKLGDA Trigger: GGCGTCCCCCAGCTTTCTCCACTCTACGAACATTTC...GCTCCAGGGGCCCACCCCTAACTCAGGAGGAGGCAACATGACCAGCTCCCATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR CCA 90 bp | CGACCTGAGAATGTTGGTGCTGGCTCCACTGGGCTAGCAAGCAGTTCTGTGGGGGGCCAGCTCACAGTATaGGGGAGCTGTCCCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPENVGAGSTGLASSSVGGQLTV*GSCPML Trigger: CAGCATGGGACAGCTCCCCCATACTGTGAGCTGGCC...CCCCACAGAACTGCTTGCTAGCCCAGTGGAGCCAGCACCAACATTCTCAGGTCG 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR CCA 90 bp | GCTGGCTCCACTGGGCTAGCAAGCAGTTCTGTGGGGAAGGAGGGCAACAGAAGATCCTCGCCTTCGTCTTaGAAGGCCAGCAGCTCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: AGSTGLASSSVGKEGNRRSSPSS*KASSSS Trigger: CGACGAGCTGCTGGCCTTCCAAGACGAAGGCGAGGA...TCTTCTGTTGCCCTCCTTCCCCACAGAACTGCTTGCTAGCCCAGTGGAGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109071.3 |
||
| 3UTR CAA 72 bp | AGCTGGCCGGTTCTCAATGCTGATAGGCTCTGGCTGTaGGGGGTTTGGGGTTTGCCCTCTCACAGCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SWPVLNADRLWL*GVWGLPSHSCP Trigger: TGGGCAGCTGTGAGAGGGCAAACCCCAAACCCCCAACAGCCAGAGCCTATCAGCATTGAGAACCGGCCAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
||
| CDS-3UTR TCA 90 bp | TCCACTGGGCTAGCAAGCAGTTCTGTGGGGAAGGAGGGCAACAGAAGATACGAGCTCCTTGCTTCTGGCTaGTGTCCGCTGGTGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: STGLASSSVGKEGNRRYELLASG*CPLVQG Trigger: CCCCTGCACCAGCGGACATCAGCCAGAAGCAAGGAG...CTCGTATCTTCTGTTGCCCTCCTTCCCCACAGAACTGCTTGCTAGCCCAGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR TCA 90 bp | CAAGCAGTTCTGTGGGGAAGGAGGGCAACAGAAGATACGAGGGTGAGTCCTGGGGTCTGCAGCGGCCTGTaGACTCCTTGCTTCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QAVLWGRRATEDTRVSPGVCSGL*TPCFWL Trigger: CAGCCAGAAGCAAGGAGTTCACAGGCCGCTGCAGAC...CCCAGGACTCACCCTCGTATCTTCTGTTGCCCTCCTTCCCCACAGAACTGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR TCA 90 bp | CAAGCAGTTCTGTGGGGAAGGAGGGCAACAGAAGATACGAGGGTGAGTCCTGGGTCACCAGTGAGGACTTaGGCTCTGCCAGGTCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QAVLWGRRATEDTRVSPGSPVRT*ALPGPA Trigger: AGCGGGACCTGGCAGAGCTCAAGTCCTCACTGGTGA...CCCAGGACTCACCCTCGTATCTTCTGTTGCCCTCCTTCCCCACAGAACTGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109071.3 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGGCCCCTGGAGCAAGCCAGGTGTTCTGTGCCTAGCAACCAAGGCTGTTGCAGCTGCCTTTCCTTaGGGGCCAGTTCATAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GVGPWSKPGVLCLATKAVAAAFP*GPVHST Trigger: AGTACTATGAACTGGCCCGCAAGGAAAGGCAGCTGC...AACAGCCTTGGTTGCTAGGCACAGAACACCTGGCTTGCTCCAGGGGCCCACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR GCA 90 bp | CGACCTGAGAATGTTGGTGCTGGCTCCACTGGGCTAGCAAGCAGTTCTGTGGGGAGCTGCATGTGCAGCTaGCTTTCCTTGCGGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RPENVGAGSTGLASSSVGSCMCS*LSLRAS Trigger: ACTGGCCCGCAAGGAAAGGCAGCTGCACATGCAGCT...CCCCACAGAACTGCTTGCTAGCCCAGTGGAGCCAGCACCAACATTCTCAGGTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR GCA 90 bp | TCTGTGGGGAAGGAGGGCAACAGAAGATACGAGGGTGAGTCCTGGGGAGCTGGGGGGTATAGCTGCATGTaGAGCTGCCTTTCCTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SVGKEGNRRYEGESWGAGGYSCM*SCLSLR Trigger: CCGCAAGGAAAGGCAGCTGCACATGCAGCTATACCC...CCCAGCTCCCCAGGACTCACCCTCGTATCTTCTGTTGCCCTCCTTCCCCACAGA 59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR GCA 90 bp | AGCAAGCCAGGTGTTCTGTGCCTAGCAACCAAGGCTGTTAGGCTGCCTGTCTCTAGTCTCTGCGAAGTGTaGTCCCGTCCCAGGGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SKPGVLCLATKAVRLPVSSLCEV*SRPRAS Trigger: CGAGGCCCTGGGACGGGAGCACACTTCGCAGAGACT...AGAGACAGGCAGCCTAACAGCCTTGGTTGCTAGGCACAGAACACCTGGCTTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109071.3 |
||
| CDS-3UTR CCA 90 bp | CAAGCAGTTCTGTGGGGAAGGAGGGCAACAGAAGATACGAGGGTGAGTCCTGGGCTGCGACCCAGGATCTaGTTGATGGCAGCGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QAVLWGRRATEDTRVSPGLRPRI*LMAALS Trigger: GGAGAGCGCTGCCATCAACCAGATCCTGGGTCGCAG...CCCAGGACTCACCCTCGTATCTTCTGTTGCCCTCCTTCCCCACAGAACTGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR TCA 90 bp | GGGGTGGGCCCCTGGAGCAAGCCAGGTGTTCTGTGCCTAGCAACCAAGGCTGTTCCTGTGGTGGATTCTTaGTGTTTTTCCCTTGACCGC | + |
|
Preference number: 4 (lower is better) Translates to: GVGPWSKPGVLCLATKAVPVVDS*CFSLDR Trigger: GCGGTCAAGGGAAAAACATCAAGAATCCACCACAGG...AACAGCCTTGGTTGCTAGGCACAGAACACCTGGCTTGCTCCAGGGGCCCACCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGGCCCCTGGAGCAAGCCAGGTGTTCTGTGCCTAGCAACCAAGGCTGTTGGAGCTGTCCCATGCTaGCTGAGGTCAGAGAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: GVGPWSKPGVLCLATKAVGAVPC*LRSENK Trigger: TTTATTCTCTGACCTCAGGCAGCATGGGACAGCTCC...AACAGCCTTGGTTGCTAGGCACAGAACACCTGGCTTGCTCCAGGGGCCCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR GCA 90 bp | CAAGCAGTTCTGTGGGGAAGGAGGGCAACAGAAGATACGAGGGTGAGTCCTGGGGGGGGAGCTGTCCCATaGTGCCTGAGGTCAGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QAVLWGRRATEDTRVSPGGGAVP*CLRSEN Trigger: ATTCTCTGACCTCAGGCAGCATGGGACAGCTCCCCC...CCCAGGACTCACCCTCGTATCTTCTGTTGCCCTCCTTCCCCACAGAACTGCTTG 58% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR GCA 90 bp | CGACCTGAGAATGTTGGTGCTGGCTCCACTGGGCTAGCAAGCAGTTCTGTGGGGGTGGGGGCAGGGAAGTaGTGTCTATATCCGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RPENVGAGSTGLASSSVGVGAGK*CLYPQE Trigger: TTCCTGCGGATATAGACAGCACTTCCCTGCCCCCAC...CCCCACAGAACTGCTTGCTAGCCCAGTGGAGCCAGCACCAACATTCTCAGGTCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR CCA 90 bp | AGCAAGCCAGGTGTTCTGTGCCTAGCAACCAAGGCTGTTAGGCTGCCTGTCTCTGGCCAGCTCACAGTATaGGGGAGCTGTCCCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKPGVLCLATKAVRLPVSGQLTV*GSCPML Trigger: CAGCATGGGACAGCTCCCCCATACTGTGAGCTGGCC...AGAGACAGGCAGCCTAACAGCCTTGGTTGCTAGGCACAGAACACCTGGCTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCGACCTGAGAATGTTGGTGCTGGCTCCACTGGGCTAGCAAGCAGTTCTGGTAGAGAGGAGGACTaGGCCAGCTCACAGTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: AERPENVGAGSTGLASSSGREED*ASSQYG Trigger: CCCATACTGTGAGCTGGCCCAGTCCTCCTCTCTACC...AGAACTGCTTGCTAGCCCAGTGGAGCCAGCACCAACATTCTCAGGTCGCTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR CCA 90 bp | GAGAATGTTGGTGCTGGCTCCACTGGGCTAGCAAGCAGTTCTGTGGGGAAGGAGGGTAGAGAGGAGGACTaGGCCAGCTCACAGTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: ENVGAGSTGLASSSVGKEGREED*ASSQYG Trigger: CCCATACTGTGAGCTGGCCCAGTCCTCCTCTCTACC...CTCCTTCCCCACAGAACTGCTTGCTAGCCCAGTGGAGCCAGCACCAACATTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR CCA 90 bp | TCTGTGGGGAAGGAGGGCAACAGAAGATACGAGGGTGAGTCCTGGGGAGCTGGGTCCCAGCATCAAGGATaGGTGGGTGAACCTGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: SVGKEGNRRYEGESWGAGSQHQG*VGEPGI Trigger: TATCCCAGGTTCACCCACCCATCCTTGATGCTGGGA...CCCAGCTCCCCAGGACTCACCCTCGTATCTTCTGTTGCCCTCCTTCCCCACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR CCA 90 bp | CAAGCAGTTCTGTGGGGAAGGAGGGCAACAGAAGATACGAGGGTGAGTCCTGGGGTGAGGGATGGCTGCTaGGTGTCCAGGTACACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QAVLWGRRATEDTRVSPGVRDGC*VSRYTR Trigger: TCTGGTGTACCTGGACACCCAGCAGCCATCCCTCAC...CCCAGGACTCACCCTCGTATCTTCTGTTGCCCTCCTTCCCCACAGAACTGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR CCA 90 bp | AGCAAGCCAGGTGTTCTGTGCCTAGCAACCAAGGCTGTTAGGCTGCCTGTCTCTCTGCGACCCAGGATCTaGTTGATGGCAGCGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SKPGVLCLATKAVRLPVSLRPRI*LMAALS Trigger: GGAGAGCGCTGCCATCAACCAGATCCTGGGTCGCAG...AGAGACAGGCAGCCTAACAGCCTTGGTTGCTAGGCACAGAACACCTGGCTTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR TCA 90 bp | GTTCTGTGCCTAGCAACCAAGGCTGTTAGGCTGCCTGTCTCTGAGATTCTTGTTGGCACAATGGCCGGGTaGGGGATGGCTGCTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VLCLATKAVRLPVSEILVGTMAG*GMAAGC Trigger: ACACCCAGCAGCCATCCCTCACCCGGCCATTGTGCC...AACAAGAATCTCAGAGACAGGCAGCCTAACAGCCTTGGTTGCTAGGCACAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR GCA 90 bp | AGCAAGCCAGGTGTTCTGTGCCTAGCAACCAAGGCTGTTAGGCTGCCTGTCTCTTATGGCTGCAGCTCCTaGTTCCCTGAGGAGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SKPGVLCLATKAVRLPVSYGCSS*FPEEGT Trigger: TGTGCCCTCCTCAGGGAAGCAGGAGCTGCAGCCATA...AGAGACAGGCAGCCTAACAGCCTTGGTTGCTAGGCACAGAACACCTGGCTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR GCA 90 bp | TCCACTGGGCTAGCAAGCAGTTCTGTGGGGAAGGAGGGCAACAGAAGATACGAGTATGGCTGCAGCTCCTaGTTCCCTGAGGAGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: STGLASSSVGKEGNRRYEYGCSS*FPEEGT Trigger: TGTGCCCTCCTCAGGGAAGCAGGAGCTGCAGCCATA...CTCGTATCTTCTGTTGCCCTCCTTCCCCACAGAACTGCTTGCTAGCCCAGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR GCA 90 bp | AGCAAGCCAGGTGTTCTGTGCCTAGCAACCAAGGCTGTTAGGCTGCCTGTCTCTCAGCCCGGGTATAGCTaGATGTGCAGCTGCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SKPGVLCLATKAVRLPVSQPGYS*MCSCLS Trigger: GGAAAGGCAGCTGCACATGCAGCTATACCCGGGCTG...AGAGACAGGCAGCCTAACAGCCTTGGTTGCTAGGCACAGAACACCTGGCTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR CCA 90 bp | CGACCTGAGAATGTTGGTGCTGGCTCCACTGGGCTAGCAAGCAGTTCTGTGGGGTGCAGGGGTGGGGTGTaGACTGCTGAAATGTTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: RPENVGAGSTGLASSSVGCRGGV*TAEMFV Trigger: TACGAACATTTCAGCAGTCCACACCCCACCCCTGCA...CCCCACAGAACTGCTTGCTAGCCCAGTGGAGCCAGCACCAACATTCTCAGGTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR CCA 90 bp | CAAGCAGTTCTGTGGGGAAGGAGGGCAACAGAAGATACGAGGGTGAGTCCTGGGCTTTGTACATGCCACTaGCACACTCCGGGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QAVLWGRRATEDTRVSPGLCTCH*HTPGPS Trigger: TGAAGGCCCCGGAGTGTGCCAGTGGCATGTACAAAG...CCCAGGACTCACCCTCGTATCTTCTGTTGCCCTCCTTCCCCACAGAACTGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109071.3 |
||
| 3UTR CAA 72 bp | AATGCTGATAGGCTCTGGCTGTTGGGGGTTTGGGGTTaGCCCTCTCACAGCTGCCCAGGAGCTGACTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NADRLWLLGVWG*PSHSCPGADSD Trigger: ATCTGAGTCAGCTCCTGGGCAGCTGTGAGAGGGCAAACCCCAAACCCCCAACAGCCAGAGCCTATCAGCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
||
| CDS-3UTR GCA 90 bp | AGCAAGCCAGGTGTTCTGTGCCTAGCAACCAAGGCTGTTAGGCTGCCTGTCTCTGTGGGGGCAGGGAAGTaGTGTCTATATCCGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SKPGVLCLATKAVRLPVSVGAGK*CLYPQE Trigger: TTCCTGCGGATATAGACAGCACTTCCCTGCCCCCAC...AGAGACAGGCAGCCTAACAGCCTTGGTTGCTAGGCACAGAACACCTGGCTTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR GCA 90 bp | TCTGTGGGGAAGGAGGGCAACAGAAGATACGAGGGTGAGTCCTGGGGAGCTGGGTTTCTATCATATGGCTaGAGCTCCTGCTTCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SVGKEGNRRYEGESWGAGFLSYG*SSCFPE Trigger: CTCAGGGAAGCAGGAGCTGCAGCCATATGATAGAAA...CCCAGCTCCCCAGGACTCACCCTCGTATCTTCTGTTGCCCTCCTTCCCCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR GCA 90 bp | GCAGAGCGACCTGAGAATGTTGGTGCTGGCTCCACTGGGCTAGCAAGCAGTTCTGCAGCTGCCTTTCCTTaGGGGCCAGTTCATAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: AERPENVGAGSTGLASSSAAAFP*GPVHST Trigger: AGTACTATGAACTGGCCCGCAAGGAAAGGCAGCTGC...AGAACTGCTTGCTAGCCCAGTGGAGCCAGCACCAACATTCTCAGGTCGCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS-3UTR CCA 90 bp | CCTGTCTCTGAGATTCTTGTTGCTGTATCTGTGGATTCTGGAGGGTGCTGTGGGTGCTCCGGAGGCCGGTaGGTAGGGCATGAGCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: PVSEILVAVSVDSGGCCGCSGGR*VGHEQI Trigger: AATCTGCTCATGCCCTACCCACCGGCCTCCGGAGCA...CCCACAGCACCCTCCAGAATCCACAGATACAGCAACAAGAATCTCAGAGACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS-3UTR CCA 90 bp | GCAGAGCGACCTGAGAATGTTGGTGCTGGCTCCACTGGGCTAGCAAGCAGTTCTTCCCAGCATCAAGGATaGGTGGGTGAACCTGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: AERPENVGAGSTGLASSSSQHQG*VGEPGI Trigger: TATCCCAGGTTCACCCACCCATCCTTGATGCTGGGA...AGAACTGCTTGCTAGCCCAGTGGAGCCAGCACCAACATTCTCAGGTCGCTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS-3UTR TCA 90 bp | GCTTCCTCCGGCCCAGCTTATGAACAGCAGCTGGTTTTTGTAAACAGAACTTCTTCAAGGATGGGTGGGTaGACCTGGGATAGGGGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ASSGPAYEQQLVFVNRTSSRMGG*TWDRGR Trigger: GCGCCCCCTATCCCAGGTTCACCCACCCATCCTTGA...AGAAGTTCTGTTTACAAAAACCAGCTGCTGTTCATAAGCTGGGCCGGAGGAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
||
| CDS-3UTR GCA 90 bp | AGGCGGCAGGATCCCCTTAAGATGATACATCTACATAGATCTAATCCCCCACCTCGGGTGAGGGATGGCTaGTGGGTGTCCAGGTACACC | + |
|
Preference number: 4 (lower is better) Translates to: RRQDPLKMIHLHRSNPPPRVRDG*WVSRYT Trigger: GGTGTACCTGGACACCCAGCAGCCATCCCTCACCCG...AGGTGGGGGATTAGATCTATGTAGATGTATCATCTTAAGGGGATCCTGCCGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR CCA 90 bp | GAGAATGTTGGTGCTGGCTCCACTGGGCTAGCAAGCAGTTCTGTGGGGAAGGAGCAGGTTTCTATCATATaGCTGCAGCTCCTGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ENVGAGSTGLASSSVGKEQVSII*LQLLLP Trigger: GGGAAGCAGGAGCTGCAGCCATATGATAGAAACCTG...CTCCTTCCCCACAGAACTGCTTGCTAGCCCAGTGGAGCCAGCACCAACATTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| 3UTR CAA 72 bp | CCAAGGCTGTTAGGCTGCCTGTCTCTGAGATTCTTGTaGCTGTATCTGTGGATTCTGGAGGGTGCTGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRLLGCLSLRFL*LYLWILEGAVG Trigger: CCCCACAGCACCCTCCAGAATCCACAGATACAGCAACAAGAATCTCAGAGACAGGCAGCCTAACAGCCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR GCA 90 bp | TGTCAGAGGCGGCAGGATCCCCTTAAGATGATACATCTACATAGATCTAATCCCGCTGATGTCCGCTGGTaGAGGGGTGGGGTGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: CQRRQDPLKMIHLHRSNPADVRW*RGGVWT Trigger: AGTCCACACCCCACCCCTGCACCAGCGGACATCAGC...GGGATTAGATCTATGTAGATGTATCATCTTAAGGGGATCCTGCCGCCTCTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR GCA 90 bp | TGTCAGAGGCGGCAGGATCCCCTTAAGATGATACATCTACATAGATCTAATCCCCGGGTGAGGGATGGCTaGTGGGTGTCCAGGTACACC | + |
|
Preference number: 4 (lower is better) Translates to: CQRRQDPLKMIHLHRSNPRVRDG*WVSRYT Trigger: GGTGTACCTGGACACCCAGCAGCCATCCCTCACCCG...GGGATTAGATCTATGTAGATGTATCATCTTAAGGGGATCCTGCCGCCTCTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS-3UTR CCA 90 bp | TGTCAGAGGCGGCAGGATCCCCTTAAGATGATACATCTACATAGATCTAATCCCTGGCCGGGTGAGGGATaGCTGCTGGGTGTCCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CQRRQDPLKMIHLHRSNPWPGEG*LLGVQV Trigger: TACCTGGACACCCAGCAGCCATCCCTCACCCGGCCA...GGGATTAGATCTATGTAGATGTATCATCTTAAGGGGATCCTGCCGCCTCTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR CCA 90 bp | CAAGCAGTTCTGTGGGGAAGGAGGGCAACAGAAGATACGAGGGTGAGTCCTGGGGGGTTTCTTGATGACTaGCTTCTTAGCCTCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QAVLWGRRATEDTRVSPGGFLDD*LLSLLL Trigger: GAGAAGGAGGCTAAGAAGCCAGTCATCAAGAAACCC...CCCAGGACTCACCCTCGTATCTTCTGTTGCCCTCCTTCCCCACAGAACTGCTTG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR GCA 90 bp | AGGCGGCAGGATCCCCTTAAGATGATACATCTACATAGATCTAATCCCCCACCTAGCTGCATGTGCAGCTaGCTTTCCTTGCGGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RRQDPLKMIHLHRSNPPPSCMCS*LSLRAS Trigger: ACTGGCCCGCAAGGAAAGGCAGCTGCACATGCAGCT...AGGTGGGGGATTAGATCTATGTAGATGTATCATCTTAAGGGGATCCTGCCGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR GCA 90 bp | AGGCGGCAGGATCCCCTTAAGATGATACATCTACATAGATCTAATCCCCCACCTCAGCCCGGGTATAGCTaGATGTGCAGCTGCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRQDPLKMIHLHRSNPPPQPGYS*MCSCLS Trigger: GGAAAGGCAGCTGCACATGCAGCTATACCCGGGCTG...AGGTGGGGGATTAGATCTATGTAGATGTATCATCTTAAGGGGATCCTGCCGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS-3UTR GCA 90 bp | GTTCTGTGCCTAGCAACCAAGGCTGTTAGGCTGCCTGTCTCTGAGATTCTTGTTCAGTCTCTTTGTACATaGCACTGGCACACTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLCLATKAVRLPVSEILVQSLCT*HWHTPG Trigger: CCCCGGAGTGTGCCAGTGGCATGTACAAAGAGACTG...AACAAGAATCTCAGAGACAGGCAGCCTAACAGCCTTGGTTGCTAGGCACAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109071.3 |
||
| CDS-3UTR CCA 90 bp | GGTTCAGGGAGTTGTGCAGCCTTTGAAATCTTCATCACCTTAAGAGGACCCCTAGTGAGGGATGGCTGCTaGGTGTCCAGGTACACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSGSCAAFEIFITLRGPLVRDGC*VSRYTR Trigger: TCTGGTGTACCTGGACACCCAGCAGCCATCCCTCAC...TAGGGGTCCTCTTAAGGTGATGAAGATTTCAAAGGCTGCACAACTCCCTGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS-3UTR CCA 90 bp | TCCACTGGGCTAGCAAGCAGTTCTGTGGGGAAGGAGGGCAACAGAAGATACGAGGGGTTTCTTGATGACTaGCTTCTTAGCCTCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: STGLASSSVGKEGNRRYEGFLDD*LLSLLL Trigger: GAGAAGGAGGCTAAGAAGCCAGTCATCAAGAAACCC...CTCGTATCTTCTGTTGCCCTCCTTCCCCACAGAACTGCTTGCTAGCCCAGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR TCA 90 bp | CCTGTCTCTGAGATTCTTGTTGCTGTATCTGTGGATTCTGGAGGGTGCTGTGGGCCTGTGGTGGATTCTTaGTGTTTTTCCCTTGACCGC | + |
|
Preference number: 4 (lower is better) Translates to: PVSEILVAVSVDSGGCCGPVVDS*CFSLDR Trigger: GCGGTCAAGGGAAAAACATCAAGAATCCACCACAGG...CCCACAGCACCCTCCAGAATCCACAGATACAGCAACAAGAATCTCAGAGACAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS-3UTR CCA 90 bp | AACATTTCTTCCTGCAGCCCCACAGAGAAACTGAAGCTGGCCGGTTCTCAATGCCAGGTTTCTATCATATaGCTGCAGCTCCTGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NISSCSPTEKLKLAGSQCQVSII*LQLLLP Trigger: GGGAAGCAGGAGCTGCAGCCATATGATAGAAACCTG...GCATTGAGAACCGGCCAGCTTCAGTTTCTCTGTGGGGCTGCAGGAAGAAATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
||
| CDS-3UTR TCA 90 bp | AGGCGGCAGGATCCCCTTAAGATGATACATCTACATAGATCTAATCCCCCACCTTGGGGTGTGGACTGCTaGAATGTTCGTAGAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RRQDPLKMIHLHRSNPPPWGVDC*NVRRVE Trigger: CTCCACTCTACGAACATTTCAGCAGTCCACACCCCA...AGGTGGGGGATTAGATCTATGTAGATGTATCATCTTAAGGGGATCCTGCCGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS-3UTR GCA 90 bp | GTTCTGTGCCTAGCAACCAAGGCTGTTAGGCTGCCTGTCTCTGAGATTCTTGTTGGAGCTGTCCCATGCTaGCTGAGGTCAGAGAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLCLATKAVRLPVSEILVGAVPC*LRSENK Trigger: TTTATTCTCTGACCTCAGGCAGCATGGGACAGCTCC...AACAAGAATCTCAGAGACAGGCAGCCTAACAGCCTTGGTTGCTAGGCACAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS-3UTR GCA 90 bp | CCTGTCTCTGAGATTCTTGTTGCTGTATCTGTGGATTCTGGAGGGTGCTGTGGGTTTCTATCATATGGCTaGAGCTCCTGCTTCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PVSEILVAVSVDSGGCCGFLSYG*SSCFPE Trigger: CTCAGGGAAGCAGGAGCTGCAGCCATATGATAGAAA...CCCACAGCACCCTCCAGAATCCACAGATACAGCAACAAGAATCTCAGAGACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS-3UTR GCA 90 bp | GGTTCAGGGAGTTGTGCAGCCTTTGAAATCTTCATCACCTTAAGAGGACCCCTACTTAGCCTCCTTCTCTaGCTTGGGTTCTGCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSGSCAAFEIFITLRGPLLSLLL*LGFCLC Trigger: ACACAGGCAGAACCCAAGGCAGAGAAGGAGGCTAAG...TAGGGGTCCTCTTAAGGTGATGAAGATTTCAAAGGCTGCACAACTCCCTGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS-3UTR CCA 90 bp | AGGCGGCAGGATCCCCTTAAGATGATACATCTACATAGATCTAATCCCCCACCTTGCAGGGGTGGGGTGTaGACTGCTGAAATGTTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: RRQDPLKMIHLHRSNPPPCRGGV*TAEMFV Trigger: TACGAACATTTCAGCAGTCCACACCCCACCCCTGCA...AGGTGGGGGATTAGATCTATGTAGATGTATCATCTTAAGGGGATCCTGCCGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS-3UTR CCA 90 bp | TCCTCTTGCAAGCGCCTGAGAACACAGGGAGCCGCTTCCTCCGGCCCAGCTTATTTCTTTTTCCTCCTGTaGTGGATTCTTGATGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSCKRLRTQGAASSGPAYFFFLL*WILDVF Trigger: AAAAACATCAAGAATCCACCACAGGAGGAAAAAGAA...ATAAGCTGGGCCGGAGGAAGCGGCTCCCTGTGTTCTCAGGCGCTTGCAAGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| CDS-3UTR CCA 90 bp | AGCAAGCCAGGTGTTCTGTGCCTAGCAACCAAGGCTGTTAGGCTGCCTGTCTCTTTTTTCCTCCTGTGGTaGATTCTTGATGTTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKPGVLCLATKAVRLPVSFFLLW*ILDVFP Trigger: GGGAAAAACATCAAGAATCCACCACAGGAGGAAAAA...AGAGACAGGCAGCCTAACAGCCTTGGTTGCTAGGCACAGAACACCTGGCTTGCT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| 3UTR CAA 72 bp | ATACATCTACATAGATCTAATCCCCCACCTCTTGAATaGATGGCCCCTGGTTCAGGGAGTTGTGCAGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IHLHRSNPPPLE*MAPGSGSCAAF Trigger: AAAGGCTGCACAACTCCCTGAACCAGGGGCCATCAATTCAAGAGGTGGGGGATTAGATCTATGTAGATGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS-3UTR GCA 90 bp | AAAAGAGTTTCTAGAATGTGGCAAGGAACCATGTCCACCACAGAGAGGTTTTATCTTAGCCTCCTTCTCTaGCTTGGGTTCTGCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KRVSRMWQGTMSTTERFYLSLLL*LGFCLC Trigger: ACACAGGCAGAACCCAAGGCAGAGAAGGAGGCTAAG...ATAAAACCTCTCTGTGGTGGACATGGTTCCTTGCCACATTCTAGAAACTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| CDS-3UTR CCA 90 bp | TGTCAGAGGCGGCAGGATCCCCTTAAGATGATACATCTACATAGATCTAATCCCTTTTTCCTCCTGTGGTaGATTCTTGATGTTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CQRRQDPLKMIHLHRSNPFFLLW*ILDVFP Trigger: GGGAAAAACATCAAGAATCCACCACAGGAGGAAAAA...GGGATTAGATCTATGTAGATGTATCATCTTAAGGGGATCCTGCCGCCTCTGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS-3UTR CCA 90 bp | GGTTCAGGGAGTTGTGCAGCCTTTGAAATCTTCATCACCTTAAGAGGACCCCTATTCTTTTTCCTCCTGTaGTGGATTCTTGATGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSGSCAAFEIFITLRGPLFFFLL*WILDVF Trigger: AAAAACATCAAGAATCCACCACAGGAGGAAAAAGAA...TAGGGGTCCTCTTAAGGTGATGAAGATTTCAAAGGCTGCACAACTCCCTGAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| 3UTR CAA 72 bp | CTTCTCGGTTTAAGAGAGAAGCATTATTGTTTAGACTaGTGGCTGGTTGACCACAGAGTTATTTTGTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLGLREKHYCLD*WLVDHRVILCD Trigger: GTCACACAAAATAACTCTGTGGTCAACCAGCCACAAGTCTAAACAATAATGCTTCTCTCTTAAACCGAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| CDS TCA 90 bp | CGGGACCCCGGCGCCTGCGGCCGCGCCTTCGGACTCATTCACCAGTaGGGACTTGAGCTCTGCCAGGTCCCGCTCCGGGCCCACAGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RDPGACGRAFGLIHQ*GLELCQVPLRAHSA Trigger: AGCGCTGTGGGCCCGGAGCGGGACCTGGCAGAGCTCAAGTCCTCACTGGTGAATGAGTCCGAAGGCGCGGCCGCAGGCGCCGGGGTCCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109071.3 |
||
| CDS TCA 90 bp | CGGCGCCTGCGGCCGCGCCTTCGGACTCATTCACCAGTGAGGACTTaGGCTCTGCCAGGTCCCGCTCCGGGCCCACAGCGCTGTCGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: RRLRPRLRTHSPVRT*ALPGPAPGPQRCRD Trigger: ATCGCGACAGCGCTGTGGGCCCGGAGCGGGACCTGGCAGAGCTCAAGTCCTCACTGGTGAATGAGTCCGAAGGCGCGGCCGCAGGCGCCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109071.3 |
||
| CDS GCA 90 bp | GCCGGGCTTGTTATGCAGCGGGGGTTGAGGCTGCGGATGCTGCCCTaGTCCGGAGGCCGGTGGGTAGGGCATGAGCAGATTGAAGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AGLVMQRGLRLRMLP*SGGRWVGHEQIEGR Trigger: TCTGCCTTCAATCTGCTCATGCCCTACCCACCGGCCTCCGGAGCAGGGCAGCATCCGCAGCCTCAACCCCCGCTGCATAACAAGCCCGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS CCA 90 bp | GCAGCTCCTGCTTCCCTGAGGAGGGCACAATGGCCGGGTGAGGGATaGCTGCTGGGTGTCCAGGTACACCAGATCCCAGCATCAAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: AAPASLRRAQWPGEG*LLGVQVHQIPASRM Trigger: CATCCTTGATGCTGGGATCTGGTGTACCTGGACACCCAGCAGCCATCCCTCACCCGGCCATTGTGCCCTCCTCAGGGAAGCAGGAGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 ENSMUST00000238914.2 |
||
| CDS-3UTR CAA 90 bp | GGGGTGGGCCCCTGGAGCAAGCCAGGTGTTCTGTGCCTAGCAACCAAGGCTGTTTTCACCAGTGAGGACTaGAGCTCTGCCAGGTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GVGPWSKPGVLCLATKAVFTSED*SSARSR Trigger: GCGGGACCTGGCAGAGCTCAAGTCCTCACTGGTGAA...AACAGCCTTGGTTGCTAGGCACAGAACACCTGGCTTGCTCCAGGGGCCCACCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000109071.3 |
||
| CDS GCA 90 bp | TCTAGGGACTCTGGAAGTTTGTCCGGGAAAAGTCTCTGCGAAGTGTaGTCCCGTCCCAGGGCCTCGGGCGCTCCCTCGGCTTCTCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: SRDSGSLSGKSLCEV*SRPRASGAPSASPC Trigger: ACATGGAGAAGCCGAGGGAGCGCCCGAGGCCCTGGGACGGGAGCACACTTCGCAGAGACTTTTCCCGGACAAACTTCCAGAGTCCCTAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109071.3 |
||
| CDS CCA 90 bp | ACTGCTGAAATGTTCGTAGAGTGGAGAAAGCTGGGGGACGCCATGTaGAGGCTGGCCGGGCTTGTTATGCAGCGGGGGTTGAGGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TAEMFVEWRKLGDAM*RLAGLVMQRGLRLR Trigger: CCGCAGCCTCAACCCCCGCTGCATAACAAGCCCGGCCAGCCTCCACATGGCGTCCCCCAGCTTTCTCCACTCTACGAACATTTCAGCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS CCA 90 bp | GGTCTGCAGCGGCCTGTGAACTCCTTGCTTCTGGCTGATGTCCGCTaGTGCAGGGGTGGGGTGTGGACTGCTGAAATGTTCGTAGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GLQRPVNSLLLADVR*CRGGVWTAEMFVEW Trigger: CCACTCTACGAACATTTCAGCAGTCCACACCCCACCCCTGCACCAGCGGACATCAGCCAGAAGCAAGGAGTTCACAGGCCGCTGCAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR CAA 90 bp | GCTGGCTCCACTGGGCTAGCAAGCAGTTCTGTGGGGAAGGAGGGCAACAGAAGACGGCCTGTGAACTCCTaGCTTCTGGCTGATGTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: AGSTGLASSSVGKEGNRRRPVNS*LLADVR Trigger: GCGGACATCAGCCAGAAGCAAGGAGTTCACAGGCCG...TCTTCTGTTGCCCTCCTTCCCCACAGAACTGCTTGCTAGCCCAGTGGAGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS-3UTR CAA 90 bp | GCTGGCTCCACTGGGCTAGCAAGCAGTTCTGTGGGGAAGGAGGGCAACAGAAGACGACCCAGGATCTGGTaGATGGCAGCGCTCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AGSTGLASSSVGKEGNRRRPRIW*MAALSL Trigger: CAAGGAGAGCGCTGCCATCAACCAGATCCTGGGTCG...TCTTCTGTTGCCCTCCTTCCCCACAGAACTGCTTGCTAGCCCAGTGGAGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
||
| CDS GCA 90 bp | CTGCAGCGGCCTGTGAACTCCTTGCTTCTGGCTGATGTCCGCTGGTaGAGGGGTGGGGTGTGGACTGCTGAAATGTTCGTAGAGTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: LQRPVNSLLLADVRW*RGGVWTAEMFVEWR Trigger: TCTCCACTCTACGAACATTTCAGCAGTCCACACCCCACCCCTGCACCAGCGGACATCAGCCAGAAGCAAGGAGTTCACAGGCCGCTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS-3UTR CAA 90 bp | GAGAATGTTGGTGCTGGCTCCACTGGGCTAGCAAGCAGTTCTGTGGGGAAGGAGCGACCCAGGATCTGGTaGATGGCAGCGCTCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: ENVGAGSTGLASSSVGKERPRIW*MAALSL Trigger: CAAGGAGAGCGCTGCCATCAACCAGATCCTGGGTCG...CTCCTTCCCCACAGAACTGCTTGCTAGCCCAGTGGAGCCAGCACCAACATTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS-3UTR CAA 90 bp | GGGGTGGGCCCCTGGAGCAAGCCAGGTGTTCTGTGCCTAGCAACCAAGGCTGTTGCATTGAGGGGTTTCTaGATGACTGGCTTCTTAGCC | + |
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Preference number: 5 (lower is better) Translates to: GVGPWSKPGVLCLATKAVALRGF*MTGFLA Trigger: GGCTAAGAAGCCAGTCATCAAGAAACCCCTCAATGC...AACAGCCTTGGTTGCTAGGCACAGAACACCTGGCTTGCTCCAGGGGCCCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS-3UTR CAA 90 bp | TCCACTGGGCTAGCAAGCAGTTCTGTGGGGAAGGAGGGCAACAGAAGATACGAGTTCCTCGCCTTCGTCTaGGAAGGCCAGCAGCTCGTC | + |
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Preference number: 5 (lower is better) Translates to: STGLASSSVGKEGNRRYEFLAFV*EGQQLV Trigger: GACGAGCTGCTGGCCTTCCAAGACGAAGGCGAGGAA...CTCGTATCTTCTGTTGCCCTCCTTCCCCACAGAACTGCTTGCTAGCCCAGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109071.3 |
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| CDS-3UTR CAA 90 bp | CTCAATGCTGATAGGCTCTGGCTGTTGGGGGTTTGGGGTTTGCCCTCTCACAGCATGGCAGCGCTCTCCTaGAGTGTGCACTCAGCAATG | + |
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Preference number: 5 (lower is better) Translates to: LNADRLWLLGVWGLPSHSMAALS*SVHSAM Trigger: CATTGCTGAGTGCACACTCAAGGAGAGCGCTGCCAT...GCTGTGAGAGGGCAAACCCCAAACCCCCAACAGCCAGAGCCTATCAGCATTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086844.10 |
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| CDS-3UTR CAA 90 bp | GGTTCAGGGAGTTGTGCAGCCTTTGAAATCTTCATCACCTTAAGAGGACCCCTACGGCCTGTGAACTCCTaGCTTCTGGCTGATGTCCGC | + |
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Preference number: 5 (lower is better) Translates to: GSGSCAAFEIFITLRGPLRPVNS*LLADVR Trigger: GCGGACATCAGCCAGAAGCAAGGAGTTCACAGGCCG...TAGGGGTCCTCTTAAGGTGATGAAGATTTCAAAGGCTGCACAACTCCCTGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS-3UTR CAA 90 bp | CGACCTGAGAATGTTGGTGCTGGCTCCACTGGGCTAGCAAGCAGTTCTGTGGGGCTTGATGTTTTTCCCTaGACCGCCTCTTCTTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: RPENVGAGSTGLASSSVGLDVFP*TASSSF Trigger: GAAAGAAGAAGAGGCGGTCAAGGGAAAAACATCAAG...CCCCACAGAACTGCTTGCTAGCCCAGTGGAGCCAGCACCAACATTCTCAGGTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS-3UTR CAA 90 bp | GCTGGCTCCACTGGGCTAGCAAGCAGTTCTGTGGGGAAGGAGGGCAACAGAAGACTTGATGTTTTTCCCTaGACCGCCTCTTCTTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: AGSTGLASSSVGKEGNRRLDVFP*TASSSF Trigger: GAAAGAAGAAGAGGCGGTCAAGGGAAAAACATCAAG...TCTTCTGTTGCCCTCCTTCCCCACAGAACTGCTTGCTAGCCCAGTGGAGCCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS GCA 90 bp | CGCATTGAGGGGTTTCTTGATGACTGGCTTCTTAGCCTCCTTCTCTaGCTTGGGTTCTGCCTGTGTTTTCAGGTTTCTATCATATGGCTG | + |
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Preference number: 5 (lower is better) Translates to: RIEGFLDDWLLSLLL*LGFCLCFQVSIIWL Trigger: CAGCCATATGATAGAAACCTGAAAACACAGGCAGAACCCAAGGCAGAGAAGGAGGCTAAGAAGCCAGTCATCAAGAAACCCCTCAATGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 ENSMUST00000238914.2 |
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| CDS-3UTR CAA 90 bp | GGTTCAGGGAGTTGTGCAGCCTTTGAAATCTTCATCACCTTAAGAGGACCCCTAGCATTGAGGGGTTTCTaGATGACTGGCTTCTTAGCC | + |
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Preference number: 5 (lower is better) Translates to: GSGSCAAFEIFITLRGPLALRGF*MTGFLA Trigger: GGCTAAGAAGCCAGTCATCAAGAAACCCCTCAATGC...TAGGGGTCCTCTTAAGGTGATGAAGATTTCAAAGGCTGCACAACTCCCTGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS-3UTR CAA 90 bp | TGTCAGAGGCGGCAGGATCCCCTTAAGATGATACATCTACATAGATCTAATCCCAGGGACTCTGGAAGTTaGTCCGGGAAAAGTCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: CQRRQDPLKMIHLHRSNPRDSGS*SGKSLC Trigger: GCAGAGACTTTTCCCGGACAAACTTCCAGAGTCCCT...GGGATTAGATCTATGTAGATGTATCATCTTAAGGGGATCCTGCCGCCTCTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109071.3 |
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| CDS CAA 90 bp | GGGGACGCCATGTGGAGGCTGGCCGGGCTTGTTATGCAGCGGGGGTaGAGGCTGCGGATGCTGCCCTGCTCCGGAGGCCGGTGGGTAGGG | + |
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Preference number: 6 (lower is better) Translates to: GDAMWRLAGLVMQRG*RLRMLPCSGGRWVG Trigger: CCCTACCCACCGGCCTCCGGAGCAGGGCAGCATCCGCAGCCTCAACCCCCGCTGCATAACAAGCCCGGCCAGCCTCCACATGGCGTCCCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS CAA 90 bp | CCGGCGCCTGCGGCCGCGCCTTCGGACTCATTCACCAGTGAGGACTaGAGCTCTGCCAGGTCCCGCTCCGGGCCCACAGCGCTGTCGCGA | + |
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Preference number: 6 (lower is better) Translates to: PAPAAAPSDSFTSED*SSARSRSGPTALSR Trigger: TCGCGACAGCGCTGTGGGCCCGGAGCGGGACCTGGCAGAGCTCAAGTCCTCACTGGTGAATGAGTCCGAAGGCGCGGCCGCAGGCGCCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109071.3 |
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| CDS TCA 72 bp | GGCGCCTGCGGCCGCGCCTTCGGACTCATTCACCAGTaGGGACTTGAGCTCTGCCAGGTCCCGCTCCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: GACGRAFGLIHQ*GLELCQVPLRA Trigger: GGCCCGGAGCGGGACCTGGCAGAGCTCAAGTCCTCACTGGTGAATGAGTCCGAAGGCGCGGCCGCAGGCGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109071.3 |
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| CDS TCA 72 bp | TGTGGAGGCTGGCCGGGCTTGTTATGCAGCGGGGGTTaGGGCTGCGGATGCTGCCCTGCTCCGGAGGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: CGGWPGLLCSGG*GCGCCPAPEAG Trigger: ACCGGCCTCCGGAGCAGGGCAGCATCCGCAGCCTCAACCCCCGCTGCATAACAAGCCCGGCCAGCCTCCACA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS TCA 72 bp | CGGCCGCGCCTTCGGACTCATTCACCAGTGAGGACTTaGGCTCTGCCAGGTCCCGCTCCGGGCCCACAGCGC | + |
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Preference number: 6 (lower is better) Translates to: RPRLRTHSPVRT*ALPGPAPGPQR Trigger: GCGCTGTGGGCCCGGAGCGGGACCTGGCAGAGCTCAAGTCCTCACTGGTGAATGAGTCCGAAGGCGCGGCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109071.3 |
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| CDS CAA 72 bp | ATGTGGAGGCTGGCCGGGCTTGTTATGCAGCGGGGGTaGAGGCTGCGGATGCTGCCCTGCTCCGGAGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: MWRLAGLVMQRG*RLRMLPCSGGR Trigger: CCGGCCTCCGGAGCAGGGCAGCATCCGCAGCCTCAACCCCCGCTGCATAACAAGCCCGGCCAGCCTCCACAT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS GCA 72 bp | TCTGGAAGTTTGTCCGGGAAAAGTCTCTGCGAAGTGTaGTCCCGTCCCAGGGCCTCGGGCGCTCCCTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: SGSLSGKSLCEV*SRPRASGAPSA Trigger: AGCCGAGGGAGCGCCCGAGGCCCTGGGACGGGAGCACACTTCGCAGAGACTTTTCCCGGACAAACTTCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109071.3 |
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| CDS CCA 72 bp | TGGGTGTCCAGGTACACCAGATCCCAGCATCAAGGATaGGTGGGTGAACCTGGGATAGGGGGCGCCAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: WVSRYTRSQHQG*VGEPGIGGARG Trigger: GCCCCTGGCGCCCCCTATCCCAGGTTCACCCACCCATCCTTGATGCTGGGATCTGGTGTACCTGGACACCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 ENSMUST00000238914.2 |
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| CDS CCA 72 bp | ATGGCTGCAGCTCCTGCTTCCCTGAGGAGGGCACAATaGCCGGGTGAGGGATGGCTGCTGGGTGTCCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: MAAAPASLRRAQ*PGEGWLLGVQV Trigger: TACCTGGACACCCAGCAGCCATCCCTCACCCGGCCATTGTGCCCTCCTCAGGGAAGCAGGAGCTGCAGCCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 ENSMUST00000238914.2 |
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| CDS CCA 72 bp | TCGCGATTCTTATCGTCCTGTTCCTCGCCTTCGTCTTaGAAGGCCAGCAGCTCGTCGGGCGCGCCGAGGTCG | + |
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Preference number: 6 (lower is better) Translates to: SRFLSSCSSPSS*KASSSSGAPRS Trigger: CGACCTCGGCGCGCCCGACGAGCTGCTGGCCTTCCAAGACGAAGGCGAGGAACAGGACGATAAGAATCGCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109071.3 |
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| CDS CAA 72 bp | GTCGCGATTCTTATCGTCCTGTTCCTCGCCTTCGTCTaGGAAGGCCAGCAGCTCGTCGGGCGCGCCGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: VAILIVLFLAFV*EGQQLVGRAEV Trigger: GACCTCGGCGCGCCCGACGAGCTGCTGGCCTTCCAAGACGAAGGCGAGGAACAGGACGATAAGAATCGCGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109071.3 |
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| CDS CAA 90 bp | GCACACTCCGGGGCCTTCAGGCCGTCCTCTAGGGACTCTGGAAGTTaGTCCGGGAAAAGTCTCTGCGAAGTGTGCTCCCGTCCCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: AHSGAFRPSSRDSGS*SGKSLCEVCSRPRA Trigger: GGCCCTGGGACGGGAGCACACTTCGCAGAGACTTTTCCCGGACAAACTTCCAGAGTCCCTAGAGGACGGCCTGAAGGCCCCGGAGTGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109071.3 |
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| CDS CAA 72 bp | GGGGCCTTCAGGCCGTCCTCTAGGGACTCTGGAAGTTaGTCCGGGAAAAGTCTCTGCGAAGTGTGCTCCCGT | + |
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Preference number: 6 (lower is better) Translates to: GAFRPSSRDSGS*SGKSLCEVCSR Trigger: ACGGGAGCACACTTCGCAGAGACTTTTCCCGGACAAACTTCCAGAGTCCCTAGAGGACGGCCTGAAGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109071.3 |
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| CDS CCA 72 bp | TCTCGAGATAGTGCATGCCACCTGCGACCCAGGATCTaGTTGATGGCAGCGCTCTCCTTGAGTGTGCACTCA | + |
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Preference number: 6 (lower is better) Translates to: SRDSACHLRPRI*LMAALSLSVHS Trigger: TGAGTGCACACTCAAGGAGAGCGCTGCCATCAACCAGATCCTGGGTCGCAGGTGGCATGCACTATCTCGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 ENSMUST00000238914.2 |
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| CDS GCA 72 bp | GACTGGGCCAGCTCACAGTATGGGGGAGCTGTCCCATaGTGCCTGAGGTCAGAGAATAAAATCCAGAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: DWASSQYGGAVP*CLRSENKIQRD Trigger: ATCTCTCTGGATTTTATTCTCTGACCTCAGGCAGCATGGGACAGCTCCCCCATACTGTGAGCTGGCCCAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 |
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| CDS TCA 72 bp | GCCAGGGTCTGTGGTGGATTCTTGATGTTTTTCCCTTaGCCGCCTCTTCTTCTTTCCGTAGTTATCCCGCGC | + |
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Preference number: 6 (lower is better) Translates to: ARVCGGFLMFFP*PPLLLSVVIPR Trigger: GCGCGGGATAACTACGGAAAGAAGAAGAGGCGGTCAAGGGAAAAACATCAAGAATCCACCACAGACCCTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238914.2 |
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| CDS CAA 72 bp | AGCCAGGGTCTGTGGTGGATTCTTGATGTTTTTCCCTaGACCGCCTCTTCTTCTTTCCGTAGTTATCCCGCG | + |
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Preference number: 6 (lower is better) Translates to: SQGLWWILDVFP*TASSSFRSYPA Trigger: CGCGGGATAACTACGGAAAGAAGAAGAGGCGGTCAAGGGAAAAACATCAAGAATCCACCACAGACCCTGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238914.2 |
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| CDS CCA 72 bp | GTAAAGCATGAACGCATTGAGGGGTTTCTTGATGACTaGCTTCTTAGCCTCCTTCTCTGCCTTGGGTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: VKHERIEGFLDD*LLSLLLCLGFC Trigger: GCAGAACCCAAGGCAGAGAAGGAGGCTAAGAAGCCAGTCATCAAGAAACCCCTCAATGCGTTCATGCTTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 ENSMUST00000238914.2 |
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| CDS CAA 90 bp | TTGAGGGGTTTCTTGATGACTGGCTTCTTAGCCTCCTTCTCTGCCTaGGGTTCTGCCTGTGTTTTCAGGTTTCTATCATATGGCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LRGFLMTGFLASFSA*GSACVFRFLSYGCS Trigger: GCTGCAGCCATATGATAGAAACCTGAAAACACAGGCAGAACCCAAGGCAGAGAAGGAGGCTAAGAAGCCAGTCATCAAGAAACCCCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086844.10 ENSMUST00000109071.3 ENSMUST00000238914.2 |
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