RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TCF4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000053477

Ensembl transcript IDs: ENSMUST00000066717.12, ENSMUST00000078486.13, ENSMUST00000114977.5, ENSMUST00000114978.9, ENSMUST00000114980.8, ENSMUST00000114982.8, ENSMUST00000114985.10, ENSMUST00000128706.8, ENSMUST00000145918.5, ENSMUST00000200703.4, ENSMUST00000200813.4, ENSMUST00000200862.4, ENSMUST00000200921.4, ENSMUST00000200966.4, ENSMUST00000201037.4, ENSMUST00000201091.4, ENSMUST00000201094.4, ENSMUST00000201124.4, ENSMUST00000201181.4, ENSMUST00000201205.4, ENSMUST00000201235.4, ENSMUST00000201288.4, ENSMUST00000201299.4, ENSMUST00000201410.4, ENSMUST00000201537.4, ENSMUST00000201627.4, ENSMUST00000201631.4, ENSMUST00000201781.4, ENSMUST00000201964.4, ENSMUST00000202057.4, ENSMUST00000202074.4, ENSMUST00000202116.4, ENSMUST00000202350.4, ENSMUST00000202354.4, ENSMUST00000202435.4, ENSMUST00000202458.4, ENSMUST00000202474.4, ENSMUST00000202477.4, ENSMUST00000202610.4, ENSMUST00000202674.4, ENSMUST00000202751.4, ENSMUST00000202765.4, ENSMUST00000202772.4, ENSMUST00000202937.4, ENSMUST00000203002.4, ENSMUST00000207214.2, ENSMUST00000209116.2, ENSMUST00000209174.2

Found 1395 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGGCACAGCTGTGGACGGGCCCACTGCGTGGTTCCGGAGAACATaGATCGCATCGTCCAGTCTTTCCAAACGGTCTTCGATTCGGCTT +
Preference number: 1 (lower is better)
Translates to: PGTAVDGPTAWFRRT*IASSSLSKRSSIRL
Trigger: AAGCCGAATCGAAGACCGTTTGGAAAGACTGGACGATGCGATTCATGTTCTCCGGAACCACGCAGTGGGCCCGTCCACAGCTGTGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
3UTR CCA 90 bp GGTTTGGGCTGCAGACTCAGCAACCTGCCGCACAACCCCAAACACTaGCACAGTTCAGGGCTCTTCGAGTGCATTGCTCCAGTGTTACAG +
Preference number: 1 (lower is better)
Translates to: GLGCRLSNLPHNPKH*HSSGLFECIAPVLQ
Trigger: CTGTAACACTGGAGCAATGCACTCGAAGAGCCCTGAACTGTGCCAGTGTTTGGGGTTGTGCGGCAGGTTGCTGAGTCTGCAGCCCAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR GCA 90 bp GGGGAGGGTAACAAGGGCAGCGCCACAAGCCAGACAAACGCTTTTTaGCTCGCCCGGGCAATGCTGCATGTAATTCCTACACATGATGTG +
Preference number: 1 (lower is better)
Translates to: GEGNKGSATSQTNAF*LARAMLHVIPTHDV
Trigger: CACATCATGTGTAGGAATTACATGCAGCATTGCCCGGGCGAGGCAAAAAGCGTTTGTCTGGCTTGTGGCGCTGCCCTTGTTACCCTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR TCA 90 bp CTACAGATGGGAACAGGTCTAGACCAAGCTGGGCTGTGGGCCTCTTaGAGGAAGTCCGGCACACAACCTGTTTGGACACTTCTACAAATC +
Preference number: 1 (lower is better)
Translates to: LQMGTGLDQAGLWAS*RKSGTQPVWTLLQI
Trigger: GATTTGTAGAAGTGTCCAAACAGGTTGTGTGCCGGACTTCCTTCAAGAGGCCCACAGCCCAGCTTGGTCTAGACCTGTTCCCATCTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR TCA 90 bp AACTTGAGGCACCCTTTTCAAGGCTCTCTTCAGAGCTTAACTTGCTaGGTACCAACAGAGGCCTGGAGCCTTCTGGCAGGGGCCATTAAT +
Preference number: 1 (lower is better)
Translates to: NLRHPFQGSLQSLTC*VPTEAWSLLAGAIN
Trigger: ATTAATGGCCCCTGCCAGAAGGCTCCAGGCCTCTGTTGGTACTCAGCAAGTTAAGCTCTGAAGAGAGCCTTGAAAAGGGTGCCTCAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
3UTR CCA 90 bp ACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTCTCTaGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGT +
Preference number: 1 (lower is better)
Translates to: TNALLHSVGGLPFSL*AVSQPVHTASHIQS
Trigger: ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
3UTR GCA 90 bp TTTTCCATCGTTCAGGGAGGAGGGGAAGTTACTGTCTTTCTTCTTTaGCCTTCTTGGAGCACCTTTGTGCCACCGCATCACAGCAAAGTC +
Preference number: 1 (lower is better)
Translates to: FSIVQGGGEVTVFLL*PSWSTFVPPHHSKV
Trigger: GACTTTGCTGTGATGCGGTGGCACAAAGGTGCTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTCCCCTCCTCCCTGAACGATGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR CCA 90 bp AAGGAATGGCTAATGTCATCACTTCGTTGCCATCAGGACGTTTGCTaGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATCCG +
Preference number: 1 (lower is better)
Translates to: KEWLMSSLRCHQDVC*FCYEGSRASPIQYP
Trigger: CGGATATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCAAACGTCCTGATGGCAACGAAGTGATGACATTAGCCATTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR GCA 90 bp CCTAAGGAATGGCTAATGTCATCACTTCGTTGCCATCAGGACGTTTaGTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATAT +
Preference number: 1 (lower is better)
Translates to: PKEWLMSSLRCHQDV*WFCYEGSRASPIQY
Trigger: ATATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCAAACGTCCTGATGGCAACGAAGTGATGACATTAGCCATTCCTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR CCA 90 bp AGCAAAGTCAAGAGGAGGCCCTCAGGCCTTGGTGCCCCATTGTCTTaGAATCCAGCACATTCCATCTTCACCTCCGTATGTGTTATTTAT +
Preference number: 1 (lower is better)
Translates to: SKVKRRPSGLGAPLS*NPAHSIFTSVCVIY
Trigger: ATAAATAACACATACGGAGGTGAAGATGGAATGTGCTGGATTCCAAGACAATGGGGCACCAAGGCCTGAGGGCCTCCTCTTGACTTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR GCA 90 bp GAAACTAATACTCTCGCTCTCCAAAGCCCTGGACAGGTAAATCTCTaGAACTTGAGGCACCCTTTTCAAGGCTCTCTTCAGAGCTTAACT +
Preference number: 1 (lower is better)
Translates to: ETNTLALQSPGQVNL*NLRHPFQGSLQSLT
Trigger: AGTTAAGCTCTGAAGAGAGCCTTGAAAAGGGTGCCTCAAGTTGCAGAGATTTACCTGTCCAGGGCTTTGGAGAGCGAGAGTATTAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
3UTR CCA 90 bp TTTGTTCAACGGTCAGTACCTCCAACACTCAGAATACAGGAAGAGTaGCTTTGGTCTTACAGAAGAGGGCTATGTGCACGAGAGGTGAAA +
Preference number: 1 (lower is better)
Translates to: FVQRSVPPTLRIQEE*LWSYRRGLCAREVK
Trigger: TTTCACCTCTCGTGCACATAGCCCTCTTCTGTAAGACCAAAGCCACTCTTCCTGTATTCTGAGTGTTGGAGGTACTGACCGTTGAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR CCA 90 bp TGTCATAGGTCTATAACATCCATCTGTCCCTCCTACCCTAAGGAATaGCTAATGTCATCACTTCGTTGCCATCAGGACGTTTGCTGGTTT +
Preference number: 1 (lower is better)
Translates to: CHRSITSICPSYPKE*LMSSLRCHQDVCWF
Trigger: AAACCAGCAAACGTCCTGATGGCAACGAAGTGATGACATTAGCCATTCCTTAGGGTAGGAGGGACAGATGGATGTTATAGACCTATGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR TCA 90 bp GTCCTGTGTTCCCAAAAGACTGGAGAAACAACTTTTTACTATTTGTaGATGAGAAGCAACTTCAGGGTCAGCATTTCGTCCTGCACTGCC +
Preference number: 1 (lower is better)
Translates to: VLCSQKTGETTFYYL*MRSNFRVSISSCTA
Trigger: GGCAGTGCAGGACGAAATGCTGACCCTGAAGTTGCTTCTCATTCACAAATAGTAAAAAGTTGTTTCTCCAGTCTTTTGGGAACACAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR TCA 90 bp GGCAGACTACATGTTGTGCTTGTTTATGCTGAATGGTTTCCTTCCTaGCTTAAGTTCCGTTTTGGACACAGACCATATTCTGCCTGTTGG +
Preference number: 1 (lower is better)
Translates to: GRLHVVLVYAEWFPS*LKFRFGHRPYSACW
Trigger: CCAACAGGCAGAATATGGTCTGTGTCCAAAACGGAACTTAAGTCAGGAAGGAAACCATTCAGCATAAACAAGCACAACATGTAGTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR GCA 90 bp GGCACAGTTCAGGGCTCTTCGAGTGCATTGCTCCAGTGTTACAGGTaGATTAATCACAATCCTTTAATTAGTTACTCCTCTAGACAGCTT +
Preference number: 1 (lower is better)
Translates to: GTVQGSSSALLQCYR*INHNPLISYSSRQL
Trigger: AAGCTGTCTAGAGGAGTAACTAATTAAAGGATTGTGATTAATGCACCTGTAACACTGGAGCAATGCACTCGAAGAGCCCTGAACTGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR GCA 90 bp AAAAGGATGCTGACAAATGCTTACGTAGGAGTCCTATGTGTTCACTaGACTACACACCAAAGTCCATTGTTGGAAAGACTTACGATGGGA +
Preference number: 1 (lower is better)
Translates to: KRMLTNAYVGVLCVH*TTHQSPLLERLTMG
Trigger: TCCCATCGTAAGTCTTTCCAACAATGGACTTTGGTGTGTAGTGCAGTGAACACATAGGACTCCTACGTAAGCATTTGTCAGCATCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR GCA 90 bp AATAATACTTCTCTGACTGTTTACATCTGGGATAATAGTCAACAGTaGCAACCAGAATTTGGAGTGGAGCGTATAGTCTACCATGGCATG +
Preference number: 1 (lower is better)
Translates to: NNTSLTVYIWDNSQQ*QPEFGVERIVYHGM
Trigger: CATGCCATGGTAGACTATACGCTCCACTCCAAATTCTGGTTGGCACTGTTGACTATTATCCCAGATGTAAACAGTCAGAGAAGTATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR TCA 90 bp GTCCTGGAGTTTCATTTGTATTTATTTCGATTGGAAAGGTCTAGCTaGGAATGTTCTGCAAAAATAGCCAACCAACTGATCCAGGAGGTT +
Preference number: 1 (lower is better)
Translates to: VLEFHLYLFRLERSS*ECSAKIANQLIQEV
Trigger: AACCTCCTGGATCAGTTGGTTGGCTATTTTTGCAGAACATTCTCAGCTAGACCTTTCCAATCGAAATAAATACAAATGAAACTCCAGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR GCA 90 bp AATCACAATCCTTTAATTAGTTACTCCTCTAGACAGCTTTCTGTGTaGTTGCAAGCATCCTGTTCCATTTTCATTAAGGGGGCATCTCTT +
Preference number: 1 (lower is better)
Translates to: NHNPLISYSSRQLSV*LQASCSIFIKGASL
Trigger: AAGAGATGCCCCCTTAATGAAAATGGAACAGGATGCTTGCAAGCACACAGAAAGCTGTCTAGAGGAGTAACTAATTAAAGGATTGTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR GCA 90 bp TATTTATTTATTTATGCTTCCAGTCAGCCGGCAGACTACATGTTGTaGTTGTTTATGCTGAATGGTTTCCTTCCTGACTTAAGTTCCGTT +
Preference number: 1 (lower is better)
Translates to: YLFIYASSQPADYML*LFMLNGFLPDLSSV
Trigger: AACGGAACTTAAGTCAGGAAGGAAACCATTCAGCATAAACAAGCACAACATGTAGTCTGCCGGCTGACTGGAAGCATAAATAAATAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR TCA 90 bp AGGCCACAGTTCATATATTTCACCATTACATATGTCTATAATACTTaGAATGAGCATATGGCGAAACCAGTACTGCACAGAGATGAGTCA +
Preference number: 1 (lower is better)
Translates to: RPQFIYFTITYVYNT*NEHMAKPVLHRDES
Trigger: TGACTCATCTCTGTGCAGTACTGGTTTCGCCATATGCTCATTTCAAGTATTATAGACATATGTAATGGTGAAATATATGAACTGTGGCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR GCA 90 bp GGACGGGCCCACTGCGTGGTTCCGGAGAACATGAATCGCATCGTCCAGTCTTTCCTGCGAGCTGCCTGCTaGCCCAGTTCCTCTGTTTGC +
Preference number: 2 (lower is better)
Translates to: GRAHCVVPENMNRIVQSFLRAAC*PSSSVC
Trigger: GCAAACAGAGGAACTGGGGCAGCAGGCAGCTCGCAG...GAAAGACTGGACGATGCGATTCATGTTCTCCGGAACCACGCAGTGGGCCCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
3UTR-3UTR CCA 90 bp GCATCAGCGTGCCCCCTCCTCAGCCCCAGGTATCACAGGTTCCCAGAATGCTTGAGGCCTGGAGCCTTCTaGCAGGGGCCATTAATCACC +
Preference number: 2 (lower is better)
Translates to: ASACPLLSPRYHRFPECLRPGAF*QGPLIT
Trigger: GGTGATTAATGGCCCCTGCCAGAAGGCTCCAGGCCT...CAAGCATTCTGGGAACCTGTGATACCTGGGGCTGAGGAGGGGGCACGCTGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
3UTR-3UTR GCA 90 bp GGAGATGACGAGGCCTGTCCTCCATTTCTAGACCAAACAGCTGTGCCTGCTGAGAGTCTGCGAGCTGCCTaGTGCCCCAGTTCCTCTGTT +
Preference number: 2 (lower is better)
Translates to: GDDEACPPFLDQTAVPAESLRAA*CPSSSV
Trigger: AACAGAGGAACTGGGGCAGCAGGCAGCTCGCAGACT...CTCAGCAGGCACAGCTGTTTGGTCTAGAAATGGAGGACAGGCCTCGTCATCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
3UTR-3UTR GCA 90 bp GGACGGGCCCACTGCGTGGTTCCGGAGAACATGAATCGCATCGTCCAGTCTTTCTCTTCGATTCGGCTTTaGAGTGAGTGCAAGGGTCCT +
Preference number: 2 (lower is better)
Translates to: GRAHCVVPENMNRIVQSFSSIRL*SECKGP
Trigger: AGGACCCTTGCACTCACTGCAAAGCCGAATCGAAGA...GAAAGACTGGACGATGCGATTCATGTTCTCCGGAACCACGCAGTGGGCCCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
3UTR-3UTR CCA 90 bp GGTCAGCATTTCGTCCTGCACTGCCCCTCCGGAAGCAGAGTTGGCACTACAGGTTTGCCATTCAGTCTCTaGGCTGTGTCTCAGCCTGTA +
Preference number: 2 (lower is better)
Translates to: GQHFVLHCPSGSRVGTTGLPFSL*AVSQPV
Trigger: TACAGGCTGAGACACAGCCCAGAGACTGAATGGCAA...ACCTGTAGTGCCAACTCTGCTTCCGGAGGGGCAGTGCAGGACGAAATGCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR-3UTR CCA 90 bp GGACGGGCCCACTGCGTGGTTCCGGAGAACATGAATCGCATCGTCCAGTCTTTCAGGGTCCTTCATAATTaGGAGATGACGAGGCCTGTC +
Preference number: 2 (lower is better)
Translates to: GRAHCVVPENMNRIVQSFRVLHN*EMTRPV
Trigger: GACAGGCCTCGTCATCTCCCAATTATGAAGGACCCT...GAAAGACTGGACGATGCGATTCATGTTCTCCGGAACCACGCAGTGGGCCCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
3UTR CAA 90 bp CTGCAACTTGAGGCACCCTTTTCAAGGCTCTCTTCAGAGCTTAACTaGCTGAGTACCAACAGAGGCCTGGAGCCTTCTGGCAGGGGCCAT +
Preference number: 2 (lower is better)
Translates to: LQLEAPFSRLSSELN*LSTNRGLEPSGRGH
Trigger: ATGGCCCCTGCCAGAAGGCTCCAGGCCTCTGTTGGTACTCAGCAAGTTAAGCTCTGAAGAGAGCCTTGAAAAGGGTGCCTCAAGTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
3UTR-3UTR GCA 90 bp AACAAACATAACCAAAGCAAAGTCAAGAGGAGGCCCTCAGGCCTTGGTGCCCCAGTCAGCATTTCGTCCTaGACTGCCCCTCCGGAAGCA +
Preference number: 2 (lower is better)
Translates to: NKHNQSKVKRRPSGLGAPVSISS*TAPPEA
Trigger: TGCTTCCGGAGGGGCAGTGCAGGACGAAATGCTGAC...TGGGGCACCAAGGCCTGAGGGCCTCCTCTTGACTTTGCTTTGGTTATGTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR CAA 90 bp TTCAGGGTCAGCATTTCGTCCTGCACTGCCCCTCCGGAAGCAGAGTaGGCACTACAGGTTACGATAACAAACCGGGGGAAGGGACAAAAA +
Preference number: 2 (lower is better)
Translates to: FRVSISSCTAPPEAE*ALQVTITNRGKGQK
Trigger: TTTTTGTCCCTTCCCCCGGTTTGTTATCGTAACCTGTAGTGCCAACTCTGCTTCCGGAGGGGCAGTGCAGGACGAAATGCTGACCCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR-3UTR GCA 90 bp AGCGTGCCCCCTCCTCAGCCCCAGGTATCACAGGTTCCCAGAATGCTTGGGTTTGGACAGGTAAATCTCTaGAACTTGAGGCACCCTTTT +
Preference number: 2 (lower is better)
Translates to: SVPPPQPQVSQVPRMLGFGQVNL*NLRHPF
Trigger: AAAAGGGTGCCTCAAGTTGCAGAGATTTACCTGTCC...AAACCCAAGCATTCTGGGAACCTGTGATACCTGGGGCTGAGGAGGGGGCACGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
3UTR-3UTR GCA 90 bp CATCAGCGTGCCCCCTCCTCAGCCCCAGGTATCACAGGTTCCCAGAATGCTTGGAACAGTGACCACCTTTaGAGCTCTTATTCATCAACC +
Preference number: 2 (lower is better)
Translates to: HQRAPSSAPGITGSQNAWNSDHL*SSYSST
Trigger: GGTTGATGAATAAGAGCTGCAAAGGTGGTCACTGTT...CCAAGCATTCTGGGAACCTGTGATACCTGGGGCTGAGGAGGGGGCACGCTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
3UTR-3UTR GCA 90 bp TCCGGAGAACATGAATCGCATCGTCCAGTCTTTCCAAACGGTCTTCGATTCGGCCGTTGGCAGGGGGTGTaGAGGAAGAGGTGCTGTAAT +
Preference number: 2 (lower is better)
Translates to: SGEHESHRPVFPNGLRFGRWQGV*RKRCCN
Trigger: ATTACAGCACCTCTTCCTGCACACCCCCTGCCAACG...GCCGAATCGAAGACCGTTTGGAAAGACTGGACGATGCGATTCATGTTCTCCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
3UTR CAA 90 bp CTGAGAATGTTCTGCAAAAATAGCCAACCAACTGATCCAGGAGGTTaGGGCTGCAGACTCAGCAACCTGCCGCACAACCCCAAACACTGG +
Preference number: 2 (lower is better)
Translates to: LRMFCKNSQPTDPGG*GCRLSNLPHNPKHW
Trigger: CCAGTGTTTGGGGTTGTGCGGCAGGTTGCTGAGTCTGCAGCCCAAACCTCCTGGATCAGTTGGTTGGCTATTTTTGCAGAACATTCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR CAA 90 bp AACCAAAGCAAAGTCAAGAGGAGGCCCTCAGGCCTTGGTGCCCCATaGTCTTGGAATCCAGCACATTCCATCTTCACCTCCGTATGTGTT +
Preference number: 2 (lower is better)
Translates to: NQSKVKRRPSGLGAP*SWNPAHSIFTSVCV
Trigger: AACACATACGGAGGTGAAGATGGAATGTGCTGGATTCCAAGACAATGGGGCACCAAGGCCTGAGGGCCTCCTCTTGACTTTGCTTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR CAA 90 bp ACTACAGATGGGAACAGGTCTAGACCAAGCTGGGCTGTGGGCCTCTaGAAGGAAGTCCGGCACACAACCTGTTTGGACACTTCTACAAAT +
Preference number: 2 (lower is better)
Translates to: TTDGNRSRPSWAVGL*KEVRHTTCLDTSTN
Trigger: ATTTGTAGAAGTGTCCAAACAGGTTGTGTGCCGGACTTCCTTCAAGAGGCCCACAGCCCAGCTTGGTCTAGACCTGTTCCCATCTGTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR TCA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACGATAATTGGGAATGCTaGAACCTCTTGCGTCTGCGA +
Preference number: 2 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYDNWEC*NLLRLR
Trigger: TCGCAGACGCAAGAGGTTTCAGCATTCCCAATTATC...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
3UTR-3UTR TCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGGATAATTGGGAATGCTaGAACCTCTTGCGTCTGCGA +
Preference number: 2 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQDNWEC*NLLRLR
Trigger: TCGCAGACGCAAGAGGTTTCAGCATTCCCAATTATC...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
3UTR-3UTR GCA 90 bp GAAGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGCACCTTTGTGCCACCGCATCATTTCGTCCTGCACTaGCCCTCCGGAAGCAGAGTT +
Preference number: 2 (lower is better)
Translates to: EVTVFLLCPSWSTFVPPHHFVLH*PSGSRV
Trigger: AACTCTGCTTCCGGAGGGGCAGTGCAGGACGAAATG...ATGCGGTGGCACAAAGGTGCTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR CCA 90 bp AACAAACATAACCAAAGCAAAGTCAAGAGGAGGCCCTCAGGCCTTGGTGCCCCATTGCCATTCAGTCTCTaGGCTGTGTCTCAGCCTGTA +
Preference number: 2 (lower is better)
Translates to: NKHNQSKVKRRPSGLGAPLPFSL*AVSQPV
Trigger: TACAGGCTGAGACACAGCCCAGAGACTGAATGGCAA...TGGGGCACCAAGGCCTGAGGGCCTCCTCTTGACTTTGCTTTGGTTATGTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR CAA 90 bp GTTTTCCATCGTTCAGGGAGGAGGGGAAGTTACTGTCTTTCTTCTTaGCCCTTCTTGGAGCACCTTTGTGCCACCGCATCACAGCAAAGT +
Preference number: 2 (lower is better)
Translates to: VFHRSGRRGSYCLSS*PFLEHLCATASQQS
Trigger: ACTTTGCTGTGATGCGGTGGCACAAAGGTGCTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTCCCCTCCTCCCTGAACGATGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR TCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATAATTGGGAATGCTaGAACCTCTTGCGTCTGCGA +
Preference number: 2 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSDNWEC*NLLRLR
Trigger: TCGCAGACGCAAGAGGTTTCAGCATTCCCAATTATC...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
3UTR CAA 90 bp ATGGCTAATGTCATCACTTCGTTGCCATCAGGACGTTTGCTGGTTTaGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATCCGGTAAT +
Preference number: 2 (lower is better)
Translates to: MANVITSLPSGRLLV*LRGQPGFPYSISGN
Trigger: ATTACCGGATATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCAAACGTCCTGATGGCAACGAAGTGATGACATTAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR CAA 90 bp AAGCAAAGTCAAGAGGAGGCCCTCAGGCCTTGGTGCCCCATTGTCTaGGAATCCAGCACATTCCATCTTCACCTCCGTATGTGTTATTTA +
Preference number: 2 (lower is better)
Translates to: KQSQEEALRPWCPIV*ESSTFHLHLRMCYL
Trigger: TAAATAACACATACGGAGGTGAAGATGGAATGTGCTGGATTCCAAGACAATGGGGCACCAAGGCCTGAGGGCCTCCTCTTGACTTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR GCA 90 bp CTCGCCCGGGCAATGCTGCATGTAATTCCTACACATGATGTGACTTTTAAGTCCTGCCATCAGGACGTTTaGTGGTTTTGTTACGAGGGC +
Preference number: 2 (lower is better)
Translates to: LARAMLHVIPTHDVTFKSCHQDV*WFCYEG
Trigger: GCCCTCGTAACAAAACCAGCAAACGTCCTGATGGCA...GGACTTAAAAGTCACATCATGTGTAGGAATTACATGCAGCATTGCCCGGGCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR-3UTR GCA 90 bp GCATCGTCCAGTCTTTCCAAACGGTCTTCGATTCGGCTTTGCAGTGAGTGCAAGCCCAGTTCCTCTGTTTaGCATTATACTGTCTGTTCC +
Preference number: 2 (lower is better)
Translates to: ASSSLSKRSSIRLCSECKPSSSV*HYTVCS
Trigger: GGAACAGACAGTATAATGGCAAACAGAGGAACTGGG...CTTGCACTCACTGCAAAGCCGAATCGAAGACCGTTTGGAAAGACTGGACGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
3UTR-3UTR CCA 90 bp CAAGTCAAATACACAGGTGTGTGGGTTAATCTAGCACATTTGCAAAACCCATTAGTACCAACAGAGGCCTaGAGCCTTCTGGCAGGGGCC +
Preference number: 2 (lower is better)
Translates to: QVKYTGVWVNLAHLQNPLVPTEA*SLLAGA
Trigger: GGCCCCTGCCAGAAGGCTCCAGGCCTCTGTTGGTAC...TAATGGGTTTTGCAAATGTGCTAGATTAACCCACACACCTGTGTATTTGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
3UTR-3UTR TCA 90 bp TTGGAATCAGTTGGACCACTGGGTGGGCTGAAAGCTGTCAAAGCATTAGTGTTCGATAATTGGGAATGCTaGAACCTCTTGCGTCTGCGA +
Preference number: 2 (lower is better)
Translates to: LESVGPLGGLKAVKALVFDNWEC*NLLRLR
Trigger: TCGCAGACGCAAGAGGTTTCAGCATTCCCAATTATC...GAACACTAATGCTTTGACAGCTTTCAGCCCACCCAGTGGTCCAACTGATTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR CCA 90 bp AGAGTTGGCACTACAGGTTACGATAACAAACCGGGGGAAGGGACAAAAATCAGACATCAGGACGTTTGCTaGTTTTGTTACGAGGGCAGC +
Preference number: 2 (lower is better)
Translates to: RVGTTGYDNKPGEGTKIRHQDVC*FCYEGS
Trigger: GCTGCCCTCGTAACAAAACCAGCAAACGTCCTGATG...TCTGATTTTTGTCCCTTCCCCCGGTTTGTTATCGTAACCTGTAGTGCCAACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR CAA 90 bp CGCACAACCCCAAACACTGGCACAGTTCAGGGCTCTTCGAGTGCATaGCTCCAGTGTTACAGGTGCATTAATCACAATCCTTTAATTAGT +
Preference number: 2 (lower is better)
Translates to: RTTPNTGTVQGSSSA*LQCYRCINHNPLIS
Trigger: ACTAATTAAAGGATTGTGATTAATGCACCTGTAACACTGGAGCAATGCACTCGAAGAGCCCTGAACTGTGCCAGTGTTTGGGGTTGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR-3UTR TCA 90 bp AACACTCAGAATACAGGAAGAGTGGCTTTGGTCTTACAGAAGAGGGCTATGTGCAGTACTGCACAGAGATaGGTCACTTCAAGTCCCATG +
Preference number: 2 (lower is better)
Translates to: NTQNTGRVALVLQKRAMCSTAQR*VTSSPM
Trigger: CATGGGACTTGAAGTGACTCATCTCTGTGCAGTACT...GCACATAGCCCTCTTCTGTAAGACCAAAGCCACTCTTCCTGTATTCTGAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR-3UTR GCA 90 bp AATCCTTTAATTAGTTACTCCTCTAGACAGCTTTCTGTGTGCTTGCAAGCATCCAAAGTAGCCAGCAGCTaGTGCTGGCCTTTGGGGAGT +
Preference number: 2 (lower is better)
Translates to: NPLISYSSRQLSVCLQASKVASS*CWPLGS
Trigger: ACTCCCCAAAGGCCAGCAGCAGCTGCTGGCTACTTT...GGATGCTTGCAAGCACACAGAAAGCTGTCTAGAGGAGTAACTAATTAAAGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR-3UTR CCA 90 bp AACAAACATAACCAAAGCAAAGTCAAGAGGAGGCCCTCAGGCCTTGGTGCCCCATGGAAAGACTTACGATaGGAATTGGTTCAATTGTGC +
Preference number: 2 (lower is better)
Translates to: NKHNQSKVKRRPSGLGAPWKDLR*ELVQLC
Trigger: GCACAATTGAACCAATTCCCATCGTAAGTCTTTCCA...TGGGGCACCAAGGCCTGAGGGCCTCCTCTTGACTTTGCTTTGGTTATGTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR CCA 90 bp CATCGTTCAGGGAGGAGGGGAAGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGATTTCCGCGGAGTTATaGCATTTACTCAGTGCTGAT +
Preference number: 2 (lower is better)
Translates to: HRSGRRGSYCLSSLPFLEISAEL*HLLSAD
Trigger: ATCAGCACTGAGTAAATGCCATAACTCCGCGGAAAT...CTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTCCCCTCCTCCCTGAACGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR CAA 90 bp TTAGAGCATTCCATTAAGACCTCCCGGGCCACAGACTTTCTTTCATaGCATAAGCCATGTTACATCTCTATAGCACAATGCCAAGCAGCC +
Preference number: 2 (lower is better)
Translates to: LEHSIKTSRATDFLS*HKPCYISIAQCQAA
Trigger: GGCTGCTTGGCATTGTGCTATAGAGATGTAACATGGCTTATGCAATGAAAGAAAGTCTGTGGCCCGGGAGGTCTTAATGGAATGCTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR-3UTR TCA 90 bp TTGGAATCAGTTGGACCACTGGGTGGGCTGAAAGCTGTCAAAGCATTAGTGTTCTGGGTTTGTAAAAGGTaGCCACGTGGTAACTATCTT +
Preference number: 2 (lower is better)
Translates to: LESVGPLGGLKAVKALVFWVCKR*PRGNYL
Trigger: AAGATAGTTACCACGTGGTCACCTTTTACAAACCCA...GAACACTAATGCTTTGACAGCTTTCAGCCCACCCAGTGGTCCAACTGATTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR GCA 90 bp CATCGTTCAGGGAGGAGGGGAAGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGTCTGATGAGTTGCTGTaGCGTAGTTTGATCTATGTT +
Preference number: 2 (lower is better)
Translates to: HRSGRRGSYCLSSLPFLESDELL*RSLIYV
Trigger: AACATAGATCAAACTACGGCACAGCAACTCATCAGA...CTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTCCCCTCCTCCCTGAACGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR GCA 90 bp GAAGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGCACCTTTGTGCCACCGCATAAGGATGCTGACAAATaGTTACGTAGGAGTCCTATG +
Preference number: 2 (lower is better)
Translates to: EVTVFLLCPSWSTFVPPHKDADK*LRRSPM
Trigger: CATAGGACTCCTACGTAAGCATTTGTCAGCATCCTT...ATGCGGTGGCACAAAGGTGCTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR CCA 90 bp AGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGCACCTTTGTGCCACCGCATCAAAACTTCACTCATACTaGCCAGAGAGAATACTGCGT +
Preference number: 2 (lower is better)
Translates to: SYCLSSLPFLEHLCATASKLHSY*PERILR
Trigger: ACGCAGTATTCTCTCTGGCCAGTATGAGTGAAGTTT...TGATGCGGTGGCACAAAGGTGCTCCAAGAAGGGCAAAGAAGAAAGACAGTAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR CCA 90 bp AACACTCAGAATACAGGAAGAGTGGCTTTGGTCTTACAGAAGAGGGCTATGTGCCATGCCAAGATTGTGTaGCTGTCAAAACAGAACCGA +
Preference number: 2 (lower is better)
Translates to: NTQNTGRVALVLQKRAMCHAKIV*LSKQNR
Trigger: TCGGTTCTGTTTTGACAGCCACACAATCTTGGCATG...GCACATAGCCCTCTTCTGTAAGACCAAAGCCACTCTTCCTGTATTCTGAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR CAA 90 bp TACGTAGGAGTCCTATGTGTTCACTGCACTACACACCAAAGTCCATaGTTGGAAAGACTTACGATGGGAATTGGTTCAATTGTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: YVGVLCVHCTTHQSP*LERLTMGIGSIVPR
Trigger: TCTGGGCACAATTGAACCAATTCCCATCGTAAGTCTTTCCAACAATGGACTTTGGTGTGTAGTGCAGTGAACACATAGGACTCCTACGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR TCA 90 bp AACACTCAGAATACAGGAAGAGTGGCTTTGGTCTTACAGAAGAGGGCTATGTGCGAACGGTCATGTACATaGCTTCATCGAGTAACTACA +
Preference number: 2 (lower is better)
Translates to: NTQNTGRVALVLQKRAMCERSCT*LHRVTT
Trigger: TGTAGTTACTCGATGAAGTCATGTACATGACCGTTC...GCACATAGCCCTCTTCTGTAAGACCAAAGCCACTCTTCCTGTATTCTGAGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR-3UTR GCA 90 bp GAAACACTAGCTGACGTGAATACCAACAAAAACGTTCATGTCGTTTTCTTCAGAACAGTGTGGGAGGATTaGCATTCAGTCTCTGGGCTG +
Preference number: 2 (lower is better)
Translates to: ETLADVNTNKNVHVVFFRTVWED*HSVSGL
Trigger: CAGCCCAGAGACTGAATGGCAATCCTCCCACACTGT...TCTGAAGAAAACGACATGAACGTTTTTGTTGGTATTCACGTCAGCTAGTGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR-3UTR GCA 90 bp ACTGCGTTACCCCTCCTCACAAAAGTGCAACTTAATGCTTTAGGGCTTATAAGGAAGTTTAGGCACAAATaGATTGCTCCACAGTGTGGG +
Preference number: 2 (lower is better)
Translates to: TALPLLTKVQLNALGLIRKFRHK*IAPQCG
Trigger: CCCACACTGTGGAGCAATGCATTTGTGCCTAAACTT...CCTTATAAGCCCTAAAGCATTAAGTTGCACTTTTGTGAGGAGGGGTAACGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR GCA 90 bp AATCCTTTAATTAGTTACTCCTCTAGACAGCTTTCTGTGTGCTTGCAAGCATCCTGCCATCAGGACGTTTaGTGGTTTTGTTACGAGGGC +
Preference number: 2 (lower is better)
Translates to: NPLISYSSRQLSVCLQASCHQDV*WFCYEG
Trigger: GCCCTCGTAACAAAACCAGCAAACGTCCTGATGGCA...GGATGCTTGCAAGCACACAGAAAGCTGTCTAGAGGAGTAACTAATTAAAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR-3UTR GCA 90 bp TTTTGTTCAACGGTCAGTACCTCCAACACTCAGAATACAGGAAGAGTGGCTTTGGAATTGGTTCAATTGTaGCCAGAGTCAACGCTAGCT +
Preference number: 2 (lower is better)
Translates to: FCSTVSTSNTQNTGRVALELVQL*PESTLA
Trigger: AGCTAGCGTTGACTCTGGGCACAATTGAACCAATTC...CAAAGCCACTCTTCCTGTATTCTGAGTGTTGGAGGTACTGACCGTTGAACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR-3UTR TCA 90 bp GAAGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGCACCTTTGTGCCACCGCATTTTACTATTTGTGAATaGGAAGCAACTTCAGGGTCA +
Preference number: 2 (lower is better)
Translates to: EVTVFLLCPSWSTFVPPHFTICE*EATSGS
Trigger: TGACCCTGAAGTTGCTTCTCATTCACAAATAGTAAA...ATGCGGTGGCACAAAGGTGCTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR GCA 90 bp GAAGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGCACCTTTGTGCCACCGCATATGAGATTTGATTCCTaGTATTCCCCTACATTTTCA +
Preference number: 2 (lower is better)
Translates to: EVTVFLLCPSWSTFVPPHMRFDS*YSPTFS
Trigger: TGAAAATGTAGGGGAATAGCAGGAATCAAATCTCAT...ATGCGGTGGCACAAAGGTGCTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR CCA 90 bp ATGTATTCAGAAACGTCTCGGTCACTGCACACTACTTCGGCTACACAGGTAGGTGTGTTCCCAAAAGACTaGAGAAACAACTTTTTACTA +
Preference number: 2 (lower is better)
Translates to: MYSETSRSLHTTSATQVGVFPKD*RNNFLL
Trigger: TAGTAAAAAGTTGTTTCTCCAGTCTTTTGGGAACAC...ACCTACCTGTGTAGCCGAAGTAGTGTGCAGTGACCGAGACGTTTCTGAATACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR-3UTR CCA 90 bp CTCGCCCGGGCAATGCTGCATGTAATTCCTACACATGATGTGACTTTTAAGTCCGTGTTCCCAAAAGACTaGAGAAACAACTTTTTACTA +
Preference number: 2 (lower is better)
Translates to: LARAMLHVIPTHDVTFKSVFPKD*RNNFLL
Trigger: TAGTAAAAAGTTGTTTCTCCAGTCTTTTGGGAACAC...GGACTTAAAAGTCACATCATGTGTAGGAATTACATGCAGCATTGCCCGGGCGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR-3UTR CCA 90 bp CAAGTCAAATACACAGGTGTGTGGGTTAATCTAGCACATTTGCAAAACCCATTAATTCTCCCTGCACCCTaGGCTGAAACCCATGTAATT +
Preference number: 2 (lower is better)
Translates to: QVKYTGVWVNLAHLQNPLILPAP*AETHVI
Trigger: AATTACATGGGTTTCAGCCCAGGGTGCAGGGAGAAT...TAATGGGTTTTGCAAATGTGCTAGATTAACCCACACACCTGTGTATTTGACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
3UTR CAA 90 bp CACAATCCTTTAATTAGTTACTCCTCTAGACAGCTTTCTGTGTGCTaGCAAGCATCCTGTTCCATTTTCATTAAGGGGGCATCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: HNPLISYSSRQLSVC*QASCSIFIKGASLL
Trigger: AAGAAGAGATGCCCCCTTAATGAAAATGGAACAGGATGCTTGCAAGCACACAGAAAGCTGTCTAGAGGAGTAACTAATTAAAGGATTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR-3UTR TCA 90 bp CTATACGCTTCTCCTGAATGTGATCGGACGATACCTGTTTCCTATATAATAATAGATAATTGGGAATGCTaGAACCTCTTGCGTCTGCGA +
Preference number: 2 (lower is better)
Translates to: LYASPECDRTIPVSYIIIDNWEC*NLLRLR
Trigger: TCGCAGACGCAAGAGGTTTCAGCATTCCCAATTATC...TATTATTATATAGGAAACAGGTATCGTCCGATCACATTCAGGAGAAGCGTATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR TCA 90 bp AATCCTTTAATTAGTTACTCCTCTAGACAGCTTTCTGTGTGCTTGCAAGCATCCTGTGCTTGTTTATGCTaGATGGTTTCCTTCCTGACT +
Preference number: 2 (lower is better)
Translates to: NPLISYSSRQLSVCLQASCACLC*MVSFLT
Trigger: AGTCAGGAAGGAAACCATTCAGCATAAACAAGCACA...GGATGCTTGCAAGCACACAGAAAGCTGTCTAGAGGAGTAACTAATTAAAGGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR CAA 90 bp TTATTTATTTATGCTTCCAGTCAGCCGGCAGACTACATGTTGTGCTaGTTTATGCTGAATGGTTTCCTTCCTGACTTAAGTTCCGTTTTG +
Preference number: 2 (lower is better)
Translates to: LFIYASSQPADYMLC*FMLNGFLPDLSSVL
Trigger: CAAAACGGAACTTAAGTCAGGAAGGAAACCATTCAGCATAAACAAGCACAACATGTAGTCTGCCGGCTGACTGGAAGCATAAATAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR GCA 90 bp CTATACGCTTCTCCTGAATGTGATCGGACGATACCTGTTTCCTATATAATAATAAAGGATGCTGACAAATaGTTACGTAGGAGTCCTATG +
Preference number: 2 (lower is better)
Translates to: LYASPECDRTIPVSYIIIKDADK*LRRSPM
Trigger: CATAGGACTCCTACGTAAGCATTTGTCAGCATCCTT...TATTATTATATAGGAAACAGGTATCGTCCGATCACATTCAGGAGAAGCGTATAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR GCA 72 bp CTGATCCAGGAGGTTTGGGCTGCAGACTCAGCAACCTaGCGCACAACCCCAAACACTGGCACAGTTCAGGGC +
Preference number: 3 (lower is better)
Translates to: LIQEVWAADSAT*RTTPNTGTVQG
Trigger: GCCCTGAACTGTGCCAGTGTTTGGGGTTGTGCGGCAGGTTGCTGAGTCTGCAGCCCAAACCTCCTGGATCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR TCA 72 bp GCTGTGGACGGGCCCACTGCGTGGTTCCGGAGAACATaGATCGCATCGTCCAGTCTTTCCAAACGGTCTTCG +
Preference number: 3 (lower is better)
Translates to: AVDGPTAWFRRT*IASSSLSKRSS
Trigger: CGAAGACCGTTTGGAAAGACTGGACGATGCGATTCATGTTCTCCGGAACCACGCAGTGGGCCCGTCCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
3UTR GCA 72 bp AGTCTGCGAGCTGCCTGCTGCCCCAGTTCCTCTGTTTaGCATTATACTGTCTGTTCCGTTGGCAGGGGGTGT +
Preference number: 3 (lower is better)
Translates to: SLRAACCPSSSV*HYTVCSVGRGC
Trigger: ACACCCCCTGCCAACGGAACAGACAGTATAATGGCAAACAGAGGAACTGGGGCAGCAGGCAGCTCGCAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
3UTR CCA 72 bp TGCAGACTCAGCAACCTGCCGCACAACCCCAAACACTaGCACAGTTCAGGGCTCTTCGAGTGCATTGCTCCA +
Preference number: 3 (lower is better)
Translates to: CRLSNLPHNPKH*HSSGLFECIAP
Trigger: TGGAGCAATGCACTCGAAGAGCCCTGAACTGTGCCAGTGTTTGGGGTTGTGCGGCAGGTTGCTGAGTCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR TCA 72 bp GGAACAGGTCTAGACCAAGCTGGGCTGTGGGCCTCTTaGAGGAAGTCCGGCACACAACCTGTTTGGACACTT +
Preference number: 3 (lower is better)
Translates to: GTGLDQAGLWAS*RKSGTQPVWTL
Trigger: AAGTGTCCAAACAGGTTGTGTGCCGGACTTCCTTCAAGAGGCCCACAGCCCAGCTTGGTCTAGACCTGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR GCA 72 bp GAGAAGCAACTTCAGGGTCAGCATTTCGTCCTGCACTaGCCCTCCGGAAGCAGAGTTGGCACTACAGGTTAC +
Preference number: 3 (lower is better)
Translates to: EKQLQGQHFVLH*PSGSRVGTTGY
Trigger: GTAACCTGTAGTGCCAACTCTGCTTCCGGAGGGGCAGTGCAGGACGAAATGCTGACCCTGAAGTTGCTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR GCA 72 bp CCCCTCCTCAGCCCCAGGTATCACAGGTTCCCAGAATaGTTGGGTTTCAGCTGGATTCTCCTAGCCTCACTT +
Preference number: 3 (lower is better)
Translates to: PLLSPRYHRFPE*LGFSWILLASL
Trigger: AAGTGAGGCTAGGAGAATCCAGCTGAAACCCAAGCATTCTGGGAACCTGTGATACCTGGGGCTGAGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
3UTR CCA 72 bp CGAGTAACTACAGATGGGAACAGGTCTAGACCAAGCTaGGCTGTGGGCCTCTTGAAGGAAGTCCGGCACACA +
Preference number: 3 (lower is better)
Translates to: RVTTDGNRSRPS*AVGLLKEVRHT
Trigger: TGTGTGCCGGACTTCCTTCAAGAGGCCCACAGCCCAGCTTGGTCTAGACCTGTTCCCATCTGTAGTTACTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR TCA 72 bp CACCCTTTTCAAGGCTCTCTTCAGAGCTTAACTTGCTaGGTACCAACAGAGGCCTGGAGCCTTCTGGCAGGG +
Preference number: 3 (lower is better)
Translates to: HPFQGSLQSLTC*VPTEAWSLLAG
Trigger: CCCTGCCAGAAGGCTCCAGGCCTCTGTTGGTACTCAGCAAGTTAAGCTCTGAAGAGAGCCTTGAAAAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
3UTR GCA 72 bp TGGCTAATGTCATCACTTCGTTGCCATCAGGACGTTTaGTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCT +
Preference number: 3 (lower is better)
Translates to: WLMSSLRCHQDV*WFCYEGSRASP
Trigger: AGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCAAACGTCCTGATGGCAACGAAGTGATGACATTAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR GCA 72 bp AACAAGGGCAGCGCCACAAGCCAGACAAACGCTTTTTaGCTCGCCCGGGCAATGCTGCATGTAATTCCTACA +
Preference number: 3 (lower is better)
Translates to: NKGSATSQTNAF*LARAMLHVIPT
Trigger: TGTAGGAATTACATGCAGCATTGCCCGGGCGAGGCAAAAAGCGTTTGTCTGGCTTGTGGCGCTGCCCTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR-3UTR CAA 90 bp TCCAGTCTTTCCAAACGGTCTTCGATTCGGCTTTGCAGTGAGTGCAAGGGTCCTGGGAGCCCACAGGAGTaGAAGGATTGGAGGAAAAGC +
Preference number: 3 (lower is better)
Translates to: SSLSKRSSIRLCSECKGPGSPQE*KDWRKS
Trigger: GCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCCC...AGGACCCTTGCACTCACTGCAAAGCCGAATCGAAGACCGTTTGGAAAGACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
3UTR GCA 72 bp GTTCAGGGAGGAGGGGAAGTTACTGTCTTTCTTCTTTaGCCTTCTTGGAGCACCTTTGTGCCACCGCATCAC +
Preference number: 3 (lower is better)
Translates to: VQGGGEVTVFLL*PSWSTFVPPHH
Trigger: GTGATGCGGTGGCACAAAGGTGCTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTCCCCTCCTCCCTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR GCA 72 bp AAAAATAGCCAACCAACTGATCCAGGAGGTTTGGGCTaGAGACTCAGCAACCTGCCGCACAACCCCAAACAC +
Preference number: 3 (lower is better)
Translates to: KNSQPTDPGGLG*RLSNLPHNPKH
Trigger: GTGTTTGGGGTTGTGCGGCAGGTTGCTGAGTCTGCAGCCCAAACCTCCTGGATCAGTTGGTTGGCTATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR-3UTR CAA 90 bp CTTCGATTCGGCTTTGCAGTGAGTGCAAGGGTCCTTCATAATTGGGAGATGACGATACTGTCTGTTCCGTaGGCAGGGGGTGTGCAGGAA +
Preference number: 3 (lower is better)
Translates to: LRFGFAVSARVLHNWEMTILSVP*AGGVQE
Trigger: TTCCTGCACACCCCCTGCCAACGGAACAGACAGTAT...CGTCATCTCCCAATTATGAAGGACCCTTGCACTCACTGCAAAGCCGAATCGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
3UTR-3UTR CAA 90 bp TCAGGACGTTTGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATTAGGCACAAATGCATaGCTCCACAGTGTGGGAGGA +
Preference number: 3 (lower is better)
Translates to: SGRLLVLLRGQPGFPYSILGTNA*LHSVGG
Trigger: TCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAA...TATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCAAACGTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR GCA 72 bp GGTTTCCGCACCAAGCAGAAAGTAGCCAGCAGCTGCTaGTGGCCTTTGGGGAGTCTTTTGCTTATTTCCAAA +
Preference number: 3 (lower is better)
Translates to: GFRTKQKVASSC*WPLGSLLLISK
Trigger: TTTGGAAATAAGCAAAAGACTCCCCAAAGGCCAGCAGCAGCTGCTGGCTACTTTCTGCTTGGTGCGGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR GCA 72 bp ACTCTCGCTCTCCAAAGCCCTGGACAGGTAAATCTCTaGAACTTGAGGCACCCTTTTCAAGGCTCTCTTCAG +
Preference number: 3 (lower is better)
Translates to: TLALQSPGQVNL*NLRHPFQGSLQ
Trigger: CTGAAGAGAGCCTTGAAAAGGGTGCCTCAAGTTGCAGAGATTTACCTGTCCAGGGCTTTGGAGAGCGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
3UTR CCA 72 bp CTAATGTCATCACTTCGTTGCCATCAGGACGTTTGCTaGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATT +
Preference number: 3 (lower is better)
Translates to: LMSSLRCHQDVC*FCYEGSRASPI
Trigger: AATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCAAACGTCCTGATGGCAACGAAGTGATGACATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR CCA 72 bp CAGTTCCTCTGTTTGCCATTATACTGTCTGTTCCGTTaGCAGGGGGTGTGCAGGAAGAGGTGCTGTAATGGT +
Preference number: 3 (lower is better)
Translates to: QFLCLPLYCLFR*QGVCRKRCCNG
Trigger: ACCATTACAGCACCTCTTCCTGCACACCCCCTGCCAACGGAACAGACAGTATAATGGCAAACAGAGGAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
3UTR-3UTR CAA 90 bp CATCGTTCAGGGAGGAGGGGAAGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGTTAGGCACAAATGCATaGCTCCACAGTGTGGGAGGA +
Preference number: 3 (lower is better)
Translates to: HRSGRRGSYCLSSLPFLELGTNA*LHSVGG
Trigger: TCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAA...CTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTCCCCTCCTCCCTGAACGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR CAA 90 bp GAAGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGCACCTTTGTGCCACCGCATCCTCCGGAAGCAGAGTaGGCACTACAGGTTACGATA +
Preference number: 3 (lower is better)
Translates to: EVTVFLLCPSWSTFVPPHPPEAE*ALQVTI
Trigger: TATCGTAACCTGTAGTGCCAACTCTGCTTCCGGAGG...ATGCGGTGGCACAAAGGTGCTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR CAA 90 bp TCGTCCAGTCTTTCCAAACGGTCTTCGATTCGGCTTTGCAGTGAGTGCAAGGGTCCCCAGTTCCTCTGTTaGCCATTATACTGTCTGTTC +
Preference number: 3 (lower is better)
Translates to: SSSLSKRSSIRLCSECKGPQFLC*PLYCLF
Trigger: GAACAGACAGTATAATGGCAAACAGAGGAACTGGGG...ACCCTTGCACTCACTGCAAAGCCGAATCGAAGACCGTTTGGAAAGACTGGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
3UTR GCA 72 bp CTGTCTTTCTTCTTTGCCCTTCTTGGAGCACCTTTGTaGCACCGCATCACAGCAAAGTCCCCGAAGAACTTT +
Preference number: 3 (lower is better)
Translates to: LSFFFALLGAPL*HRITAKSPKNF
Trigger: AAAGTTCTTCGGGGACTTTGCTGTGATGCGGTGGCACAAAGGTGCTCCAAGAAGGGCAAAGAAGAAAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR CCA 72 bp GTACCTCCAACACTCAGAATACAGGAAGAGTGGCTTTaGTCTTACAGAAGAGGGCTATGTGCACGAGAGGTG +
Preference number: 3 (lower is better)
Translates to: VPPTLRIQEEWL*SYRRGLCAREV
Trigger: CACCTCTCGTGCACATAGCCCTCTTCTGTAAGACCAAAGCCACTCTTCCTGTATTCTGAGTGTTGGAGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR-3UTR CAA 90 bp TTGGAATCAGTTGGACCACTGGGTGGGCTGAAAGCTGTCAAAGCATTAGTGTTCTTAGGCACAAATGCATaGCTCCACAGTGTGGGAGGA +
Preference number: 3 (lower is better)
Translates to: LESVGPLGGLKAVKALVFLGTNA*LHSVGG
Trigger: TCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAA...GAACACTAATGCTTTGACAGCTTTCAGCCCACCCAGTGGTCCAACTGATTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR CAA 90 bp CATCGTTCAGGGAGGAGGGGAAGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGAATGTCATCACTTCGTaGCCATCAGGACGTTTGCTG +
Preference number: 3 (lower is better)
Translates to: HRSGRRGSYCLSSLPFLENVITS*PSGRLL
Trigger: CAGCAAACGTCCTGATGGCAACGAAGTGATGACATT...CTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTCCCCTCCTCCCTGAACGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR GCA 72 bp TCCTACCCTAAGGAATGGCTAATGTCATCACTTCGTTaGCATCAGGACGTTTGCTGGTTTTGTTACGAGGGC +
Preference number: 3 (lower is better)
Translates to: SYPKEWLMSSLR*HQDVCWFCYEG
Trigger: GCCCTCGTAACAAAACCAGCAAACGTCCTGATGGCAACGAAGTGATGACATTAGCCATTCCTTAGGGTAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR-3UTR CAA 90 bp AGAGTTGGCACTACAGGTTACGATAACAAACCGGGGGAAGGGACAAAAATCAGATTGCCATCAGGACGTTaGCTGGTTTTGTTACGAGGG +
Preference number: 3 (lower is better)
Translates to: RVGTTGYDNKPGEGTKIRLPSGR*LVLLRG
Trigger: CCCTCGTAACAAAACCAGCAAACGTCCTGATGGCAA...TCTGATTTTTGTCCCTTCCCCCGGTTTGTTATCGTAACCTGTAGTGCCAACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR-3UTR CAA 90 bp ATGTATTCAGAAACGTCTCGGTCACTGCACACTACTTCGGCTACACAGGTAGGTAATGTCATCACTTCGTaGCCATCAGGACGTTTGCTG +
Preference number: 3 (lower is better)
Translates to: MYSETSRSLHTTSATQVGNVITS*PSGRLL
Trigger: CAGCAAACGTCCTGATGGCAACGAAGTGATGACATT...ACCTACCTGTGTAGCCGAAGTAGTGTGCAGTGACCGAGACGTTTCTGAATACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR-3UTR CAA 90 bp TTGGAATCAGTTGGACCACTGGGTGGGCTGAAAGCTGTCAAAGCATTAGTGTTCGACTTACGATGGGAATaGGTTCAATTGTGCCCAGAG +
Preference number: 3 (lower is better)
Translates to: LESVGPLGGLKAVKALVFDLRWE*VQLCPE
Trigger: CTCTGGGCACAATTGAACCAATTCCCATCGTAAGTC...GAACACTAATGCTTTGACAGCTTTCAGCCCACCCAGTGGTCCAACTGATTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR CAA 90 bp ATTTCCTGTGATCATAACCAACTTTTCCTAGGTCAGGACCTGGGGCATCGCATCGTAAATCTCTGCAACTaGAGGCACCCTTTTCAAGGC +
Preference number: 3 (lower is better)
Translates to: ISCDHNQLFLGQDLGHRIVNLCN*RHPFQG
Trigger: GCCTTGAAAAGGGTGCCTCAAGTTGCAGAGATTTAC...GATGCGATGCCCCAGGTCCTGACCTAGGAAAAGTTGGTTATGATCACAGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
3UTR-3UTR CAA 90 bp ATTTCCTGTGATCATAACCAACTTTTCCTAGGTCAGGACCTGGGGCATCGCATCCTCCTAGCCTCACTTTaGCAAACAGTGACCACCTTT +
Preference number: 3 (lower is better)
Translates to: ISCDHNQLFLGQDLGHRILLASL*QTVTTF
Trigger: AAAGGTGGTCACTGTTTGCAAAAGTGAGGCTAGGAG...GATGCGATGCCCCAGGTCCTGACCTAGGAAAAGTTGGTTATGATCACAGGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
3UTR-3UTR CAA 90 bp TATGTTTCCGATGATATAAACATTGGAAGGCACAGTGGTAACATTGTAGCATTCGGACGTTTGCTGGTTTaGTTACGAGGGCAGCCGGGC +
Preference number: 3 (lower is better)
Translates to: YVSDDINIGRHSGNIVAFGRLLV*LRGQPG
Trigger: GCCCGGCTGCCCTCGTAACAAAACCAGCAAACGTCC...GAATGCTACAATGTTACCACTGTGCCTTCCAATGTTTATATCATCGGAAACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR GCA 72 bp CAAACACTGGCACAGTTCAGGGCTCTTCGAGTGCATTaGTCCAGTGTTACAGGTGCATTAATCACAATCCTT +
Preference number: 3 (lower is better)
Translates to: QTLAQFRALRVH*SSVTGALITIL
Trigger: AAGGATTGTGATTAATGCACCTGTAACACTGGAGCAATGCACTCGAAGAGCCCTGAACTGTGCCAGTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR-3UTR CAA 90 bp AACACTCAGAATACAGGAAGAGTGGCTTTGGTCTTACAGAAGAGGGCTATGTGCGCACTCAGCCACACATaGAAAACAAGGTGTAACTGT +
Preference number: 3 (lower is better)
Translates to: NTQNTGRVALVLQKRAMCALSHT*KTRCNC
Trigger: ACAGTTACACCTTGTTTTCAATGTGTGGCTGAGTGC...GCACATAGCCCTCTTCTGTAAGACCAAAGCCACTCTTCCTGTATTCTGAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR TCA 72 bp AGTGGAAAGACAAAACAAAACCAGGAATCGGAAGACTaGATTGGAATCAGTTGGACCACTGGGTGGGCTGAA +
Preference number: 3 (lower is better)
Translates to: SGKTKQNQESED*IGISWTTGWAE
Trigger: TTCAGCCCACCCAGTGGTCCAACTGATTCCAATTCAGTCTTCCGATTCCTGGTTTTGTTTTGTCTTTCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR CCA 72 bp TCTATAACATCCATCTGTCCCTCCTACCCTAAGGAATaGCTAATGTCATCACTTCGTTGCCATCAGGACGTT +
Preference number: 3 (lower is better)
Translates to: SITSICPSYPKE*LMSSLRCHQDV
Trigger: AACGTCCTGATGGCAACGAAGTGATGACATTAGCCATTCCTTAGGGTAGGAGGGACAGATGGATGTTATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR CCA 72 bp CTACACACCAAAGTCCATTGTTGGAAAGACTTACGATaGGAATTGGTTCAATTGTGCCCAGAGTCAACGCTA +
Preference number: 3 (lower is better)
Translates to: LHTKVHCWKDLR*ELVQLCPESTL
Trigger: TAGCGTTGACTCTGGGCACAATTGAACCAATTCCCATCGTAAGTCTTTCCAACAATGGACTTTGGTGTGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR-3UTR CAA 90 bp TATGTTTCCGATGATATAAACATTGGAAGGCACAGTGGTAACATTGTAGCATTCCCTCCGGAAGCAGAGTaGGCACTACAGGTTACGATA +
Preference number: 3 (lower is better)
Translates to: YVSDDINIGRHSGNIVAFPPEAE*ALQVTI
Trigger: TATCGTAACCTGTAGTGCCAACTCTGCTTCCGGAGG...GAATGCTACAATGTTACCACTGTGCCTTCCAATGTTTATATCATCGGAAACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR-3UTR CAA 90 bp CTATACGCTTCTCCTGAATGTGATCGGACGATACCTGTTTCCTATATAATAATATCTTCTTTGCCCTTCTaGGAGCACCTTTGTGCCACC +
Preference number: 3 (lower is better)
Translates to: LYASPECDRTIPVSYIIISSLPF*EHLCAT
Trigger: GGTGGCACAAAGGTGCTCCAAGAAGGGCAAAGAAGA...TATTATTATATAGGAAACAGGTATCGTCCGATCACATTCAGGAGAAGCGTATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR GCA 72 bp TCTCTGACTGTTTACATCTGGGATAATAGTCAACAGTaGCAACCAGAATTTGGAGTGGAGCGTATAGTCTAC +
Preference number: 3 (lower is better)
Translates to: SLTVYIWDNSQQ*QPEFGVERIVY
Trigger: GTAGACTATACGCTCCACTCCAAATTCTGGTTGGCACTGTTGACTATTATCCCAGATGTAAACAGTCAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR GCA 72 bp CCTTTAATTAGTTACTCCTCTAGACAGCTTTCTGTGTaGTTGCAAGCATCCTGTTCCATTTTCATTAAGGGG +
Preference number: 3 (lower is better)
Translates to: PLISYSSRQLSV*LQASCSIFIKG
Trigger: CCCCTTAATGAAAATGGAACAGGATGCTTGCAAGCACACAGAAAGCTGTCTAGAGGAGTAACTAATTAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR CCA 72 bp TATGTGTTCACTGCACTACACACCAAAGTCCATTGTTaGAAAGACTTACGATGGGAATTGGTTCAATTGTGC +
Preference number: 3 (lower is better)
Translates to: YVFTALHTKVHC*KDLRWELVQLC
Trigger: GCACAATTGAACCAATTCCCATCGTAAGTCTTTCCAACAATGGACTTTGGTGTGTAGTGCAGTGAACACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR CCA 72 bp CAATGCCAAGCAGCCCTCAGGTTCTGTAAAGTAGGCTaGAGTCTGTTCTACAAAAATATTAACTTACAGTAC +
Preference number: 3 (lower is better)
Translates to: QCQAALRFCKVG*SLFYKNINLQY
Trigger: GTACTGTAAGTTAATATTTTTGTAGAACAGACTCCAGCCTACTTTACAGAACCTGAGGGCTGCTTGGCATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
3UTR-3UTR CAA 90 bp GTAGGAGTCCTATGTGTTCACTGCACTACACACCAAAGTCCATTGTTGGAAAGATTGCTGTGCCGTAGTTaGATCTATGTTTCTATCAAA +
Preference number: 3 (lower is better)
Translates to: VGVLCVHCTTHQSPLLERLLCRS*IYVSIK
Trigger: TTTGATAGAAACATAGATCAAACTACGGCACAGCAA...TCTTTCCAACAATGGACTTTGGTGTGTAGTGCAGTGAACACATAGGACTCCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR TCA 72 bp CATGTTGTGCTTGTTTATGCTGAATGGTTTCCTTCCTaGCTTAAGTTCCGTTTTGGACACAGACCATATTCT +
Preference number: 3 (lower is better)
Translates to: HVVLVYAEWFPS*LKFRFGHRPYS
Trigger: AGAATATGGTCTGTGTCCAAAACGGAACTTAAGTCAGGAAGGAAACCATTCAGCATAAACAAGCACAACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR GCA 72 bp TTTAGTAAGCACCTTTATGATAACATGTATCAAAAGTaGCACTCTGAAGATATCCATCAATGCGGGGAGGAT +
Preference number: 3 (lower is better)
Translates to: FSKHLYDNMYQK*HSEDIHQCGED
Trigger: ATCCTCCCCGCATTGATGGATATCTTCAGAGTGGCACTTTTGATACATGTTATCATAAAGGTGCTTACTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR TCA 72 bp TCCCCTATTCAATATCCGGTAATTAGAAACACTAGCTaGCGTGAATACCAACAAAAACGTTCATGTCGTTTT +
Preference number: 3 (lower is better)
Translates to: SPIQYPVIRNTS*REYQQKRSCRF
Trigger: AAAACGACATGAACGTTTTTGTTGGTATTCACGTCAGCTAGTGTTTCTAATTACCGGATATTGAATAGGGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR-3UTR CAA 90 bp CTATACGCTTCTCCTGAATGTGATCGGACGATACCTGTTTCCTATATAATAATATTGCTGTGCCGTAGTTaGATCTATGTTTCTATCAAA +
Preference number: 3 (lower is better)
Translates to: LYASPECDRTIPVSYIIILLCRS*IYVSIK
Trigger: TTTGATAGAAACATAGATCAAACTACGGCACAGCAA...TATTATTATATAGGAAACAGGTATCGTCCGATCACATTCAGGAGAAGCGTATAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR GCA 72 bp ATCCTGACTTCTGCTAAGTTTCTTTCAAAAATCCAGTaGAGGAATACCAATATCTTACCTGGGTTTGATAAT +
Preference number: 3 (lower is better)
Translates to: ILTSAKFLSKIQ*RNTNILPGFDN
Trigger: ATTATCAAACCCAGGTAAGATATTGGTATTCCTGCACTGGATTTTTGAAAGAAACTTAGCAGAAGTCAGGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR TCA 72 bp TTTCATTTGTATTTATTTCGATTGGAAAGGTCTAGCTaGGAATGTTCTGCAAAAATAGCCAACCAACTGATC +
Preference number: 3 (lower is better)
Translates to: FHLYLFRLERSS*ECSAKIANQLI
Trigger: GATCAGTTGGTTGGCTATTTTTGCAGAACATTCTCAGCTAGACCTTTCCAATCGAAATAAATACAAATGAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp TCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTCTCGCGCTGCGAGCTGCCTGCTaGCCCAGTTCCTCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: SDPQALTGIIGHPPFLLALRAAC*PSSSVC
Trigger: GCAAACAGAGGAACTGGGGCAGCAGGCAGCTCGCAG...CGCGAGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR GCA 90 bp TCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTCTCGCGAAGAGTTGCCGCCCATaGCCGGGATGGTGTATGCGC +
Preference number: 4 (lower is better)
Translates to: SDPQALTGIIGHPPFLLAKSCRP*PGWCMR
Trigger: GCGCATACACCATCCCGGGCATGGGCGGCAACTCTT...CGCGAGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR CCA 90 bp GCATCAGCGTGCCCCCTCCTCAGCCCCAGGTATCACAGGTTCCCAGAATGCTTGCTGGACGGGCTTGGATaGCCTCCAGTTCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: ASACPLLSPRYHRFPECLLDGLG*PPVPQD
Trigger: GTCCTGGGGAACTGGAGGCCATCCAAGCCCGTCCAG...CAAGCATTCTGGGAACCTGTGATACCTGGGGCTGAGGAGGGGGCACGCTGATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR CCA 90 bp TCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTCTCGCGTGCTGGCTGCTGGCTTaGAGGAAGGATAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: SDPQALTGIIGHPPFLLACWLLA*RKDSLA
Trigger: CGCCAGGCTATCCTTCCTCCAAGCCAGCAGCCAGCA...CGCGAGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR TCA 90 bp TCTCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTCTCGGTCGGCAGTGCTGGCTaGAGGAGCGTAGACCGCTTT +
Preference number: 4 (lower is better)
Translates to: SRTLRRSRALLAILRSFSVGSAG*RSVDRF
Trigger: AAAGCGGTCTACGCTCCTTCAGCCAGCACTGCCGAC...CGAGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR CCA 90 bp CATCAGCGTGCCCCCTCCTCAGCCCCAGGTATCACAGGTTCCCAGAATGCTTGGGTTCCTGGACGGGCTTaGATGGCCTCCAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: HQRAPSSAPGITGSQNAWVPGRA*MASSSP
Trigger: TGGGGAACTGGAGGCCATCCAAGCCCGTCCAGGAAC...CCAAGCATTCTGGGAACCTGTGATACCTGGGGCTGAGGAGGGGGCACGCTGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR TCA 90 bp CTTGCTGAGTACCAACAGAGGCCTGGAGCCTTCTGGCAGGGGCCATTAATCACCTCCATGGCACTACTGTaGAGAGGCCTCCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: LAEYQQRPGAFWQGPLITSMALL*RGLRRA
Trigger: TGCCCGCCGGAGGCCTCTTCACAGTAGTGCCATGGA...GGTGATTAATGGCCCCTGCCAGAAGGCTCCAGGCCTCTGTTGGTACTCAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR GCA 90 bp TCTCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTCTCGAGTCTGCGAGCTGCCTaGTGCCCCAGTTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: SRTLRRSRALLAILRSFSSLRAA*CPSSSV
Trigger: AACAGAGGAACTGGGGCAGCAGGCAGCTCGCAGACT...CGAGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR CCA 90 bp GGTCAGCATTTCGTCCTGCACTGCCCCTCCGGAAGCAGAGTTGGCACTACAGGTGTTCCTGGACGGGCTTaGATGGCCTCCAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GQHFVLHCPSGSRVGTTGVPGRA*MASSSP
Trigger: TGGGGAACTGGAGGCCATCCAAGCCCGTCCAGGAAC...ACCTGTAGTGCCAACTCTGCTTCCGGAGGGGCAGTGCAGGACGAAATGCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp GCATCAGCGTGCCCCCTCCTCAGCCCCAGGTATCACAGGTTCCCAGAATGCTTGACTGGGAGCCAGGTTTaGTGGGCGAAAGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: ASACPLLSPRYHRFPECLTGSQV*WAKGFL
Trigger: CAGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGT...CAAGCATTCTGGGAACCTGTGATACCTGGGGCTGAGGAGGGGGCACGCTGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR CCA 90 bp GGTCAGCATTTCGTCCTGCACTGCCCCTCCGGAAGCAGAGTTGGCACTACAGGTTGCTGGCTGCTGGCTTaGAGGAAGGATAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: GQHFVLHCPSGSRVGTTGCWLLA*RKDSLA
Trigger: CGCCAGGCTATCCTTCCTCCAAGCCAGCAGCCAGCA...ACCTGTAGTGCCAACTCTGCTTCCGGAGGGGCAGTGCAGGACGAAATGCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp GGACGGGCCCACTGCGTGGTTCCGGAGAACATGAATCGCATCGTCCAGTCTTTCTGCTGGCTGCTGGCTTaGAGGAAGGATAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: GRAHCVVPENMNRIVQSFCWLLA*RKDSLA
Trigger: CGCCAGGCTATCCTTCCTCCAAGCCAGCAGCCAGCA...GAAAGACTGGACGATGCGATTCATGTTCTCCGGAACCACGCAGTGGGCCCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
CDS-3UTR CCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCCACCAGGCACAGCTGTaGACGGGCCCACTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFHQAQL*TGPLRG
Trigger: ACCACGCAGTGGGCCCGTCCACAGCTGTGCCTGGTG...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACCACCAGGCACAGCTGTaGACGGGCCCACTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHHQAQL*TGPLRG
Trigger: ACCACGCAGTGGGCCCGTCCACAGCTGTGCCTGGTG...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACCCAGAAGACACGCTCTaGCCCTGGAGGCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHPEDTL*PWRPGG
Trigger: GCCACCAGGCCTCCAGGGCCAGAGCGTGTCTTCTGG...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCTCCATGGCACTACTGTaGAGAGGCCTCCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFSMALL*RGLRRA
Trigger: TGCCCGCCGGAGGCCTCTTCACAGTAGTGCCATGGA...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTCTCGCGTGTTGTAGTCGGCAGTaGTGGCTGAAGGAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: SDPQALTGIIGHPPFLLACCSRQ*WLKERR
Trigger: TCTACGCTCCTTCAGCCAGCACTGCCGACTACAACA...CGCGAGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR GCA 90 bp TCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTCTCGCGAGGGAAAGTGCTGGCTaGTGGCTTGGAGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: SDPQALTGIIGHPPFLLARESAG*WLGGRI
Trigger: TATCCTTCCTCCAAGCCAGCAGCCAGCACTTTCCCT...CGCGAGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR GCA 90 bp TCTCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTCTCGAGCTCCAAGGGTCGCTaGTGTGATGGCCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: SRTLRRSRALLAILRSFSSSKGR*CDGHLA
Trigger: TGCAAGATGGCCATCACAGCAGCGACCCTTGGAGCT...CGAGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR GCA 90 bp TCTCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTCTCGCGTTGGCAGGGGGTGTaGAGGAAGAGGTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: SRTLRRSRALLAILRSFSRWQGV*RKRCCN
Trigger: ATTACAGCACCTCTTCCTGCACACCCCCTGCCAACG...CGAGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR GCA 90 bp GGTCAGCATTTCGTCCTGCACTGCCCCTCCGGAAGCAGAGTTGGCACTACAGGTGGTCCCATGATCCCATaGATGTCCCCATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: GQHFVLHCPSGSRVGTTGGPMIP*MSPWPP
Trigger: TGGTGGCCATGGGGACATGCATGGGATCATGGGACC...ACCTGTAGTGCCAACTCTGCTTCCGGAGGGGCAGTGCAGGACGAAATGCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACCTGGACGGGCTTGGATaGCCTCCAGTTCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHLDGLG*PPVPQD
Trigger: GTCCTGGGGAACTGGAGGCCATCCAAGCCCGTCCAG...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
CDS-3UTR CCA 90 bp TCTCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTCTCGGAAAGTGCTGGCTGCTaGCTTGGAGGAAGGATAGCC +
Preference number: 4 (lower is better)
Translates to: SRTLRRSRALLAILRSFSESAGC*LGGRIA
Trigger: GGCTATCCTTCCTCCAAGCCAGCAGCCAGCACTTTC...CGAGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR CCA 90 bp GTACCTCTGAAAATCCCAGGGGAGGGTAACAAGGGCAGCGCCACAAGCCAGACAGCTGATTCATCCCGCTaGAGGAGCTCCAAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: VPLKIPGEGNKGSATSQTADSSR*RSSKGR
Trigger: GCGACCCTTGGAGCTCCTCCAGCGGGATGAATCAGC...TGTCTGGCTTGTGGCGCTGCCCTTGTTACCCTCCCCTGGGATTTTCAGAGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACACCAGGCACAGCTGTaGACGGGCCCACTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFAHQAQL*TGPLRG
Trigger: ACCACGCAGTGGGCCCGTCCACAGCTGTGCCTGGTG...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACGCCCTGGAGGCCTGGTaGCATCCCTCTGTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHALEAW*HPSVRV
Trigger: GACCCTTACAGAGGGATGCCACCAGGCCTCCAGGGC...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACCTGGCCCTGGAGGCCTaGTGGCATCCCTCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHLALEA*WHPSVR
Trigger: CCTTACAGAGGGATGCCACCAGGCCTCCAGGGCCAG...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACGACACGCTCTGGCCCTaGAGGCCTGGTGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYDTLWP*RPGGIP
Trigger: AGGGATGCCACCAGGCCTCCAGGGCCAGAGCGTGTC...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCAGACACGCTCTGGCCCTaGAGGCCTGGTGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFADTLWP*RPGGIP
Trigger: AGGGATGCCACCAGGCCTCCAGGGCCAGAGCGTGTC...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGGACACGCTCTGGCCCTaGAGGCCTGGTGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVDTLWP*RPGGIP
Trigger: AGGGATGCCACCAGGCCTCCAGGGCCAGAGCGTGTC...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCCAGAAGACACGCTCTaGCCCTGGAGGCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYPEDTL*PWRPGG
Trigger: GCCACCAGGCCTCCAGGGCCAGAGCGTGTCTTCTGG...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGCCAGAAGACACGCTCTaGCCCTGGAGGCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQPEDTL*PWRPGG
Trigger: GCCACCAGGCCTCCAGGGCCAGAGCGTGTCTTCTGG...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACCAGAAGACACGCTCTaGCCCTGGAGGCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFAPEDTL*PWRPGG
Trigger: GCCACCAGGCCTCCAGGGCCAGAGCGTGTCTTCTGG...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTCCCATCCCAGGGTGTaGGCCAGCCAAGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRSHPRV*ASQGEW
Trigger: CCACTCTCCTTGGCTGGCCCACACCCTGGGATGGGA...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCTCCCATCCCAGGGTGTaGGCCAGCCAAGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFSHPRV*ASQGEW
Trigger: CCACTCTCCTTGGCTGGCCCACACCCTGGGATGGGA...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp TCTCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTCTCGGGAGCCCACAGGAGTTaGAGGATTGGAGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: SRTLRRSRALLAILRSFSGAHRS*RIGGKA
Trigger: AGCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCC...CGAGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR GCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCCTGCGAGCTGCCTGCTaGCCCAGTTCCTCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFLRAAC*PSSSVC
Trigger: GCAAACAGAGGAACTGGGGCAGCAGGCAGCTCGCAG...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTGTGGACGGGCCCACTaGGTGGTTCCGGAGAACATG +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRCGRAH*VVPENM
Trigger: CATGTTCTCCGGAACCACGCAGTGGGCCCGTCCACA...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACTGTGGACGGGCCCACTaGGTGGTTCCGGAGAACATG +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHCGRAH*VVPENM
Trigger: CATGTTCTCCGGAACCACGCAGTGGGCCCGTCCACA...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTCGCGCTCAGCCTTCTaGTCTGGGGTCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRSRSAF*SGVRSS
Trigger: TGAGGACCTGACCCCAGAGCAGAAGGCTGAGCGCGA...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCTCGCGCTCAGCCTTCTaGTCTGGGGTCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFSRSAF*SGVRSS
Trigger: TGAGGACCTGACCCCAGAGCAGAAGGCTGAGCGCGA...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACAAGAGTTGCCGCCCATaGCCGGGATGGTGTATGCGC +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHKSCRP*PGWCMR
Trigger: GCGCATACACCATCCCGGGCATGGGCGGCAACTCTT...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114977.5
ENSMUST00000114978.9
CDS-3UTR CCA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCTGGACGGGCTTGGATaGCCTCCAGTTCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYLDGLG*PPVPQD
Trigger: GTCCTGGGGAACTGGAGGCCATCCAAGCCCGTCCAG...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
CDS-3UTR CCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCTGCTGGCTGCTGGCTTaGAGGAAGGATAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFCWLLA*RKDSLA
Trigger: CGCCAGGCTATCCTTCCTCCAAGCCAGCAGCCAGCA...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACTGCTGGCTGCTGGCTTaGAGGAAGGATAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHCWLLA*RKDSLA
Trigger: CGCCAGGCTATCCTTCCTCCAAGCCAGCAGCCAGCA...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TCTCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTCTCGCACTACGATGGAACGTaGACATCGGAGGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: SRTLRRSRALLAILRSFSHYDGT*TSEEDW
Trigger: CCAGTCTTCCTCCGATGTCCACGTTCCATCGTAGTG...CGAGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR CCA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGCCCTGGAGGCCTGGTaGCATCCCTCTGTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSALEAW*HPSVRV
Trigger: GACCCTTACAGAGGGATGCCACCAGGCCTCCAGGGC...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGGCCCTGGAGGCCTGGTaGCATCCCTCTGTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQALEAW*HPSVRV
Trigger: GACCCTTACAGAGGGATGCCACCAGGCCTCCAGGGC...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACGCCCTGGAGGCCTGGTaGCATCCCTCTGTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYALEAW*HPSVRV
Trigger: GACCCTTACAGAGGGATGCCACCAGGCCTCCAGGGC...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGACACGCTCTGGCCCTaGAGGCCTGGTGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSDTLWP*RPGGIP
Trigger: AGGGATGCCACCAGGCCTCCAGGGCCAGAGCGTGTC...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AACAAACATAACCAAAGCAAAGTCAAGAGGAGGCCCTCAGGCCTTGGTGCCCCAGACACGCTCTGGCCCTaGAGGCCTGGTGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: NKHNQSKVKRRPSGLGAPDTLWP*RPGGIP
Trigger: AGGGATGCCACCAGGCCTCCAGGGCCAGAGCGTGTC...TGGGGCACCAAGGCCTGAGGGCCTCCTCTTGACTTTGCTTTGGTTATGTTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATCCAGAAGACACGCTCTaGCCCTGGAGGCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDPEDTL*PWRPGG
Trigger: GCCACCAGGCCTCCAGGGCCAGAGCGTGTCTTCTGG...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GGTCAGCATTTCGTCCTGCACTGCCCCTCCGGAAGCAGAGTTGGCACTACAGGTATCAGGAGCTTGGTCTaGGGCTTGTCGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GQHFVLHCPSGSRVGTTGIRSLV*GLSLFR
Trigger: CCTGAAGAGCGACAAGCCCCAGACCAAGCTCCTGAT...ACCTGTAGTGCCAACTCTGCTTCCGGAGGGGCAGTGCAGGACGAAATGCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCATCCCATCCCAGGGTGTaGGCCAGCCAAGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFASHPRV*ASQGEW
Trigger: CCACTCTCCTTGGCTGGCCCACACCCTGGGATGGGA...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCATCCCATCCCAGGGTGTaGGCCAGCCAAGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSSHPRV*ASQGEW
Trigger: CCACTCTCCTTGGCTGGCCCACACCCTGGGATGGGA...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGTCCCATCCCAGGGTGTaGGCCAGCCAAGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQSHPRV*ASQGEW
Trigger: CCACTCTCCTTGGCTGGCCCACACCCTGGGATGGGA...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
3UTR CAA 72 bp CAGTCTGCGAGCTGCCTGCTGCCCCAGTTCCTCTGTTaGCCATTATACTGTCTGTTCCGTTGGCAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: QSASCLLPQFLC*PLYCLFRWQGV
Trigger: CACCCCCTGCCAACGGAACAGACAGTATAATGGCAAACAGAGGAACTGGGGCAGCAGGCAGCTCGCAGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
CDS-3UTR TCA 90 bp AACAAACATAACCAAAGCAAAGTCAAGAGGAGGCCCTCAGGCCTTGGTGCCCCATCCATGGCACTACTGTaGAGAGGCCTCCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: NKHNQSKVKRRPSGLGAPSMALL*RGLRRA
Trigger: TGCCCGCCGGAGGCCTCTTCACAGTAGTGCCATGGA...TGGGGCACCAAGGCCTGAGGGCCTCCTCTTGACTTTGCTTTGGTTATGTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCTGTGGGAGGGTCCCATaGTCCCATGCATGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFCGRVP*SHACPH
Trigger: ATGGGGACATGCATGGGATCATGGGACCCTCCCACA...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCAGTCGGCAGTGCTGGCTaGAGGAGCGTAGACCGCTTT +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFAVGSAG*RSVDRF
Trigger: AAAGCGGTCTACGCTCCTTCAGCCAGCACTGCCGAC...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114977.5
ENSMUST00000114978.9
CDS-3UTR GCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCAGTCTGCGAGCTGCCTaGTGCCCCAGTTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRSLRAA*CPSSSV
Trigger: AACAGAGGAACTGGGGCAGCAGGCAGCTCGCAGACT...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCATGTGGACGGGCCCACTaGGTGGTTCCGGAGAACATG +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFACGRAH*VVPENM
Trigger: CATGTTCTCCGGAACCACGCAGTGGGCCCGTCCACA...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCATGTGGACGGGCCCACTaGGTGGTTCCGGAGAACATG +
Preference number: 4 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSCGRAH*VVPENM
Trigger: CATGTTCTCCGGAACCACGCAGTGGGCCCGTCCACA...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACGGTCCCATGATCCCATaGATGTCCCCATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHGPMIP*MSPWPP
Trigger: TGGTGGCCATGGGGACATGCATGGGATCATGGGACC...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACGCAGGAGAGAATGGCTaGCTCTCAGAGCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHAGENG*LSEPRH
Trigger: ATGGCGTGGCTCTGAGAGGCAGCCATTCTCTCCTGC...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACCTCTTCAGGTGGAGCTaGACCATACGGCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHLFRWS*TIRPSS
Trigger: GGAGCTTGGCCGTATGGTGCAGCTCCACCTGAAGAG...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCCTCTTCAGGTGGAGCTaGACCATACGGCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRLFRWS*TIRPSS
Trigger: GGAGCTTGGCCGTATGGTGCAGCTCCACCTGAAGAG...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACTCCCATGTGATTCGCTaGGTCTCCCATCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHSHVIR*VSHPRV
Trigger: CACCCTGGGATGGGAGACGCAGCGAATCACATGGGA...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTCCCATGTGATTCGCTaGGTCTCCCATCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRSHVIR*VSHPRV
Trigger: CACCCTGGGATGGGAGACGCAGCGAATCACATGGGA...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCTCCCATGTGATTCGCTaGGTCTCCCATCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFSHVIR*VSHPRV
Trigger: CACCCTGGGATGGGAGACGCAGCGAATCACATGGGA...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCAACTTCCCCCGAGGCCTaGCATTTTGTGCACGCCAGC +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFATSPEA*HFVHAS
Trigger: GCTGGCGTGCACAAAATGCCAGGCCTCGGGGGAAGT...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066717.12
CDS-3UTR CCA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGTTCCTGGACGGGCTTaGATGGCCTCCAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSVPGRA*MASSSP
Trigger: TGGGGAACTGGAGGCCATCCAAGCCCGTCCAGGAAC...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
CDS-3UTR CCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACGGGAGCCAGGTTTGGTaGGCGAAAGGGTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHGSQVW*AKGFLD
Trigger: ATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCC...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCACTGGGAGCCAGGTTTaGTGGGCGAAAGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFTGSQV*WAKGFL
Trigger: CAGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGT...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACGCTGATTCATCCCGCTaGAGGAGCTCCAAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYADSSR*RSSKGR
Trigger: GCGACCCTTGGAGCTCCTCCAGCGGGATGAATCAGC...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TCTCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTCTCGTTTGTGCCACTACGATaGAACGTGGACATCGGAGGA +
Preference number: 4 (lower is better)
Translates to: SRTLRRSRALLAILRSFSFVPLR*NVDIGG
Trigger: TCCTCCGATGTCCACGTTCCATCGTAGTGGCACAAA...CGAGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR CCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCGACCGGAACCTGGTTTaGCAGGAGAGAATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRDRNLV*QERMAA
Trigger: GGCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTC...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCCTGGACCGGAAGTTGTaGGACCGGAACCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFLDRKL*DRNLVW
Trigger: CCAAACCAGGTTCCGGTCCCACAACTTCCGGTCCAG...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGCCCTGGAGGCCTGGTaGCATCCCTCTGTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSALEAW*HPSVRV
Trigger: GACCCTTACAGAGGGATGCCACCAGGCCTCCAGGGC...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTCTGGCCCTGGAGGCCTaGTGGCATCCCTCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSLALEA*WHPSVR
Trigger: CCTTACAGAGGGATGCCACCAGGCCTCCAGGGCCAG...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TCAGGACGTTTGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATACTGGCCCTGGAGGCCTaGTGGCATCCCTCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: SGRLLVLLRGQPGFPYSILALEA*WHPSVR
Trigger: CCTTACAGAGGGATGCCACCAGGCCTCCAGGGCCAG...TATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCAAACGTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATCTGGCCCTGGAGGCCTaGTGGCATCCCTCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDLALEA*WHPSVR
Trigger: CCTTACAGAGGGATGCCACCAGGCCTCCAGGGCCAG...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GTACCTCTGAAAATCCCAGGGGAGGGTAACAAGGGCAGCGCCACAAGCCAGACATTGTCGCTCTTCAGGTaGAGCTGCACCATACGGCCA +
Preference number: 4 (lower is better)
Translates to: VPLKIPGEGNKGSATSQTLSLFR*SCTIRP
Trigger: TGGCCGTATGGTGCAGCTCCACCTGAAGAGCGACAA...TGTCTGGCTTGTGGCGCTGCCCTTGTTACCCTCCCCTGGGATTTTCAGAGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATTCCCATCCCAGGGTGTaGGCCAGCCAAGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDSHPRV*ASQGEW
Trigger: CCACTCTCCTTGGCTGGCCCACACCCTGGGATGGGA...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AACAAACATAACCAAAGCAAAGTCAAGAGGAGGCCCTCAGGCCTTGGTGCCCCATCCCATCCCAGGGTGTaGGCCAGCCAAGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: NKHNQSKVKRRPSGLGAPSHPRV*ASQGEW
Trigger: CCACTCTCCTTGGCTGGCCCACACCCTGGGATGGGA...TGGGGCACCAAGGCCTGAGGGCCTCCTCTTGACTTTGCTTTGGTTATGTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp TGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATCCGGTAATTTCCATGGCACTACTGTaGAGAGGCCTCCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: CWFCYEGSRASPIQYPVISMALL*RGLRRA
Trigger: TGCCCGCCGGAGGCCTCTTCACAGTAGTGCCATGGA...AATTACCGGATATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp GGTCAGCATTTCGTCCTGCACTGCCCCTCCGGAAGCAGAGTTGGCACTACAGGTCTGGACTGTGGGATATaGGAAGAATTGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: GQHFVLHCPSGSRVGTTGLDCGI*EELPSI
Trigger: GATGCTGGGCAATTCTTCTCATATCCCACAGTCCAG...ACCTGTAGTGCCAACTCTGCTTCCGGAGGGGCAGTGCAGGACGAAATGCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCATGTGGGAGGGTCCCATaGTCCCATGCATGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFACGRVP*SHACPH
Trigger: ATGGGGACATGCATGGGATCATGGGACCCTCCCACA...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACTGTGGGAGGGTCCCATaGTCCCATGCATGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYCGRVP*SHACPH
Trigger: ATGGGGACATGCATGGGATCATGGGACCCTCCCACA...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCATGTGGGAGGGTCCCATaGTCCCATGCATGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSCGRVP*SHACPH
Trigger: ATGGGGACATGCATGGGATCATGGGACCCTCCCACA...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCCACATCTGTCCCATGTaGTTCGCTGCGTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRHICPM*FAASPI
Trigger: GATGGGAGACGCAGCGAATCACATGGGACAGATGTG...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp CCAGTCTTTCCAAACGGTCTTCGATTCGGCTTTGCAGTGAGTGCAAGGGTCCTTGTCGGCAGTGCTGGCTaGAGGAGCGTAGACCGCTTT +
Preference number: 4 (lower is better)
Translates to: PVFPNGLRFGFAVSARVLVGSAG*RSVDRF
Trigger: AAAGCGGTCTACGCTCCTTCAGCCAGCACTGCCGAC...AAGGACCCTTGCACTCACTGCAAAGCCGAATCGAAGACCGTTTGGAAAGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
CDS-3UTR GCA 90 bp GGTCAGCATTTCGTCCTGCACTGCCCCTCCGGAAGCAGAGTTGGCACTACAGGTAAAGGGTTCCTGGATTaGCCATATCCATGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: GQHFVLHCPSGSRVGTTGKGFLD*PYPCPL
Trigger: GAGGGGACATGGATATGGGCAATCCAGGAACCCTTT...ACCTGTAGTGCCAACTCTGCTTCCGGAGGGGCAGTGCAGGACGAAATGCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCAGCTCCAAGGGTCGCTaGTGTGATGGCCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFSSKGR*CDGHLA
Trigger: TGCAAGATGGCCATCACAGCAGCGACCCTTGGAGCT...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACCGTTGGCAGGGGGTGTaGAGGAAGAGGTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHRWQGV*RKRCCN
Trigger: ATTACAGCACCTCTTCCTGCACACCCCCTGCCAACG...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCCGTTGGCAGGGGGTGTaGAGGAAGAGGTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRRWQGV*RKRCCN
Trigger: ATTACAGCACCTCTTCCTGCACACCCCCTGCCAACG...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCCGTTGGCAGGGGGTGTaGAGGAAGAGGTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFRWQGV*RKRCCN
Trigger: ATTACAGCACCTCTTCCTGCACACCCCCTGCCAACG...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTCTGCGAGCTGCCTGCTaGCCCAGTTCCTCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSLRAAC*PSSSVC
Trigger: GCAAACAGAGGAACTGGGGCAGCAGGCAGCTCGCAG...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAAGTCTGCGAGCTGCCTaGTGCCCCAGTTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSSLRAA*CPSSSV
Trigger: AACAGAGGAACTGGGGCAGCAGGCAGCTCGCAGACT...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACAGTCTGCGAGCTGCCTaGTGCCCCAGTTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYSLRAA*CPSSSV
Trigger: AACAGAGGAACTGGGGCAGCAGGCAGCTCGCAGACT...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACGGTCCCATGATCCCATaGATGTCCCCATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYGPMIP*MSPWPP
Trigger: TGGTGGCCATGGGGACATGCATGGGATCATGGGACC...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGGGTCCCATGATCCCATaGATGTCCCCATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQGPMIP*MSPWPP
Trigger: TGGTGGCCATGGGGACATGCATGGGATCATGGGACC...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGGGTCCCATGATCCCATaGATGTCCCCATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVGPMIP*MSPWPP
Trigger: TGGTGGCCATGGGGACATGCATGGGATCATGGGACC...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGCAGGAGAGAATGGCTaGCTCTCAGAGCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSAGENG*LSEPRH
Trigger: ATGGCGTGGCTCTGAGAGGCAGCCATTCTCTCCTGC...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACGCAGGAGAGAATGGCTaGCTCTCAGAGCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYAGENG*LSEPRH
Trigger: ATGGCGTGGCTCTGAGAGGCAGCCATTCTCTCCTGC...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACTCTTCAGGTGGAGCTaGACCATACGGCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFALFRWS*TIRPSS
Trigger: GGAGCTTGGCCGTATGGTGCAGCTCCACCTGAAGAG...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTAAGAGTTGCCGCCCATaGCCGGGATGGTGTATGCGC +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSKSCRP*PGWCMR
Trigger: GCGCATACACCATCCCGGGCATGGGCGGCAACTCTT...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114977.5
ENSMUST00000114978.9
CDS-3UTR GCA 90 bp CCAGTCTTTCCAAACGGTCTTCGATTCGGCTTTGCAGTGAGTGCAAGGGTCCTTAAGAGTTGCCGCCCATaGCCGGGATGGTGTATGCGC +
Preference number: 4 (lower is better)
Translates to: PVFPNGLRFGFAVSARVLKSCRP*PGWCMR
Trigger: GCGCATACACCATCCCGGGCATGGGCGGCAACTCTT...AAGGACCCTTGCACTCACTGCAAAGCCGAATCGAAGACCGTTTGGAAAGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
CDS-3UTR GCA 90 bp GGAGATGACGAGGCCTGTCCTCCATTTCTAGACCAAACAGCTGTGCCTGCTGAGAGTACATCAAAGAGTTaGCGCCCATGCCCGGGATGG +
Preference number: 4 (lower is better)
Translates to: GDDEACPPFLDQTAVPAESTSKS*RPCPGW
Trigger: CCATCCCGGGCATGGGCGGCAACTCTTTGATGTACT...CTCAGCAGGCACAGCTGTTTGGTCTAGAAATGGAGGACAGGCCTCGTCATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
CDS-3UTR CCA 90 bp CTTGCTGAGTACCAACAGAGGCCTGGAGCCTTCTGGCAGGGGCCATTAATCACCGGGCGAAAGGGTTCCTaGATTGCCCATATCCATGTC +
Preference number: 4 (lower is better)
Translates to: LAEYQQRPGAFWQGPLITGRKGS*IAHIHV
Trigger: GACATGGATATGGGCAATCCAGGAACCCTTTCGCCC...GGTGATTAATGGCCCCTGCCAGAAGGCTCCAGGCCTCTGTTGGTACTCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR CCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGGGGAGCCAGGTTTGGTaGGCGAAAGGGTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQGSQVW*AKGFLD
Trigger: ATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCC...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGCGTGCCCCCTCCTCAGCCCCAGGTATCACAGGTTCCCAGAATGCTTGGGTTTTTGTCTGTACCTCCATaGCACTACTGTGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SVPPPQPQVSQVPRMLGFLSVPP*HYCEEA
Trigger: GGCCTCTTCACAGTAGTGCCATGGAGGTACAGACAA...AAACCCAAGCATTCTGGGAACCTGTGATACCTGGGGCTGAGGAGGGGGCACGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR CCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACGGAGGAAGGATAGCCTaGCGAGTCCCTGTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHGGRIA*RVPVVV
Trigger: GACTACAACAGGGACTCGCCAGGCTATCCTTCCTCC...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGGAGGAAGGATAGCCTaGCGAGTCCCTGTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFGGRIA*RVPVVV
Trigger: GACTACAACAGGGACTCGCCAGGCTATCCTTCCTCC...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATTGCTGGCTGCTGGCTTaGAGGAAGGATAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDCWLLA*RKDSLA
Trigger: CGCCAGGCTATCCTTCCTCCAAGCCAGCAGCCAGCA...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGCTGATTCATCCCGCTaGAGGAGCTCCAAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSADSSR*RSSKGR
Trigger: GCGACCCTTGGAGCTCCTCCAGCGGGATGAATCAGC...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TCTCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTCTCGGCTCAAACGTTCATGTaGATGCAGGCTACAGTAGCT +
Preference number: 4 (lower is better)
Translates to: SRTLRRSRALLAILRSFSAQTFM*MQATVA
Trigger: AGCTACTGTAGCCTGCATCCACATGAACGTTTGAGC...CGAGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR CCA 90 bp CTCGCCCGGGCAATGCTGCATGTAATTCCTACACATGATGTGACTTTTAAGTCCCACCAGGCACAGCTGTaGACGGGCCCACTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: LARAMLHVIPTHDVTFKSHQAQL*TGPLRG
Trigger: ACCACGCAGTGGGCCCGTCCACAGCTGTGCCTGGTG...GGACTTAAAAGTCACATCATGTGTAGGAATTACATGCAGCATTGCCCGGGCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTTGGCAGGAGAGAATaGCTGCCTCTCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRFGRRE*LPLRAT
Trigger: CGTGGCTCTGAGAGGCAGCCATTCTCTCCTGCCAAA...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCTTTGGCAGGAGAGAATaGCTGCCTCTCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFFGRRE*LPLRAT
Trigger: CGTGGCTCTGAGAGGCAGCCATTCTCTCCTGCCAAA...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCAGACCGGAACCTGGTTTaGCAGGAGAGAATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFADRNLV*QERMAA
Trigger: GGCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTC...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGACCGGAACCTGGTTTaGCAGGAGAGAATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSDRNLV*QERMAA
Trigger: GGCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTC...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCACTGGACCGGAAGTTGTaGGACCGGAACCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSLDRKL*DRNLVW
Trigger: CCAAACCAGGTTCCGGTCCCACAACTTCCGGTCCAG...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGCTGGACCGGAAGTTGTaGGACCGGAACCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVLDRKL*DRNLVW
Trigger: CCAAACCAGGTTCCGGTCCCACAACTTCCGGTCCAG...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp ATGTATTCAGAAACGTCTCGGTCACTGCACACTACTTCGGCTACACAGGTAGGTGACACGCTCTGGCCCTaGAGGCCTGGTGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: MYSETSRSLHTTSATQVGDTLWP*RPGGIP
Trigger: AGGGATGCCACCAGGCCTCCAGGGCCAGAGCGTGTC...ACCTACCTGTGTAGCCGAAGTAGTGTGCAGTGACCGAGACGTTTCTGAATACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTACCAGAAGACACGCTCTaGCCCTGGAGGCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLPEDTL*PWRPGG
Trigger: GCCACCAGGCCTCCAGGGCCAGAGCGTGTCTTCTGG...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTGTCGCTCTTCAGGTaGAGCTGCACCATACGGCCA +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRLSLFR*SCTIRP
Trigger: TGGCCGTATGGTGCAGCTCCACCTGAAGAGCGACAA...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCATCAGGAGCTTGGTCTaGGGCTTGTCGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRIRSLV*GLSLFR
Trigger: CCTGAAGAGCGACAAGCCCCAGACCAAGCTCCTGAT...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATGACAGCCACGGCCTaGTGGAGAATCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHMTATA*WRIRSL
Trigger: CAAGCTCCTGATTCTCCACCAGGCCGTGGCTGTCAT...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCATGACAGCCACGGCCTaGTGGAGAATCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFMTATA*WRIRSL
Trigger: CAAGCTCCTGATTCTCCACCAGGCCGTGGCTGTCAT...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACTGTAGTCGGCAGTGCTaGCTGAAGGAGCGTAGACCG +
Preference number: 4 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYCSRQC*LKERRP
Trigger: CGGTCTACGCTCCTTCAGCCAGCACTGCCGACTACA...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114977.5
ENSMUST00000114978.9
3UTR CAA 72 bp CAAGAGGAGGCCCTCAGGCCTTGGTGCCCCATTGTCTaGGAATCCAGCACATTCCATCTTCACCTCCGTATG +
Preference number: 4 (lower is better)
Translates to: QEEALRPWCPIV*ESSTFHLHLRM
Trigger: CATACGGAGGTGAAGATGGAATGTGCTGGATTCCAAGACAATGGGGCACCAAGGCCTGAGGGCCTCCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp TTGGAATCAGTTGGACCACTGGGTGGGCTGAAAGCTGTCAAAGCATTAGTGTTCTCCATGGCACTACTGTaGAGAGGCCTCCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: LESVGPLGGLKAVKALVFSMALL*RGLRRA
Trigger: TGCCCGCCGGAGGCCTCTTCACAGTAGTGCCATGGA...GAACACTAATGCTTTGACAGCTTTCAGCCCACCCAGTGGTCCAACTGATTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTATCCATGGCACTACTGTaGAGAGGCCTCCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLSMALL*RGLRRA
Trigger: TGCCCGCCGGAGGCCTCTTCACAGTAGTGCCATGGA...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp GATATCTCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTCTGGACTGTGGGATATaGGAAGAATTGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: DISDPQALTGIIGHPPFLLDCGI*EELPSI
Trigger: GATGCTGGGCAATTCTTCTCATATCCCACAGTCCAG...AAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGAGATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR TCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGGAGCCCACAGGAGTTaGAGGATTGGAGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFGAHRS*RIGGKA
Trigger: AGCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCC...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp GGTCAGCATTTCGTCCTGCACTGCCCCTCCGGAAGCAGAGTTGGCACTACAGGTTTCATAATTGGGAGATaGCGAGGCCTGTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: GQHFVLHCPSGSRVGTTGFIIGR*RGLSSI
Trigger: AATGGAGGACAGGCCTCGTCATCTCCCAATTATGAA...ACCTGTAGTGCCAACTCTGCTTCCGGAGGGGCAGTGCAGGACGAAATGCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATTGTGGGAGGGTCCCATaGTCCCATGCATGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDCGRVP*SHACPH
Trigger: ATGGGGACATGCATGGGATCATGGGACCCTCCCACA...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGCACATCTGTCCCATGTaGTTCGCTGCGTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQHICPM*FAASPI
Trigger: GATGGGAGACGCAGCGAATCACATGGGACAGATGTG...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCACACATCTGTCCCATGTaGTTCGCTGCGTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSHICPM*FAASPI
Trigger: GATGGGAGACGCAGCGAATCACATGGGACAGATGTG...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp AGCGTGCCCCCTCCTCAGCCCCAGGTATCACAGGTTCCCAGAATGCTTGGGTTTCTACATTTGAGCCAGTaGAATGTCCACTCGCCAAAG +
Preference number: 4 (lower is better)
Translates to: SVPPPQPQVSQVPRMLGFLHLSQ*NVHSPK
Trigger: CTTTGGCGAGTGGACATTTCACTGGCTCAAATGTAG...AAACCCAAGCATTCTGGGAACCTGTGATACCTGGGGCTGAGGAGGGGGCACGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR GCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCTGTTGTAGTCGGCAGTaGTGGCTGAAGGAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFCCSRQ*WLKERR
Trigger: TCTACGCTCCTTCAGCCAGCACTGCCGACTACAACA...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGCTCCAAGGGTCGCTaGTGTGATGGCCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQSSKGR*CDGHLA
Trigger: TGCAAGATGGCCATCACAGCAGCGACCCTTGGAGCT...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCGCAGGCTACAGTAGCTaGTGGACTGTGGGATATGAG +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRAGYSS*WTVGYE
Trigger: CTCATATCCCACAGTCCAGCAGCTACTGTAGCCTGC...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GATATCTCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTGTGTGCAGGAAGAGGTaGTGTAATGGTTTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: DISDPQALTGIIGHPPFLVCRKR*CNGLCH
Trigger: GTGGCACAAACCATTACAGCACCTCTTCCTGCACAC...AAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGAGATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR GCA 90 bp TCTCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTCTCGCCCAGTTCCTCTGTTTaGCATTATACTGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SRTLRRSRALLAILRSFSPSSSV*HYTVCS
Trigger: GGAACAGACAGTATAATGGCAAACAGAGGAACTGGG...CGAGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR GCA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATGGTCCCATGATCCCATaGATGTCCCCATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDGPMIP*MSPWPP
Trigger: TGGTGGCCATGGGGACATGCATGGGATCATGGGACC...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATGCAGGAGAGAATGGCTaGCTCTCAGAGCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDAGENG*LSEPRH
Trigger: ATGGCGTGGCTCTGAGAGGCAGCCATTCTCTCCTGC...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCCAAGTCAGGGGAAGTTaGAGACTGGACCGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRQVRGS*RLDRKL
Trigger: CAACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTG...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCCAAGTCAGGGGAAGTTaGAGACTGGACCGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFQVRGS*RLDRKL
Trigger: CAACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTG...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATCTCTTCAGGTGGAGCTaGACCATACGGCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDLFRWS*TIRPSS
Trigger: GGAGCTTGGCCGTATGGTGCAGCTCCACCTGAAGAG...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp ATGTATTCAGAAACGTCTCGGTCACTGCACACTACTTCGGCTACACAGGTAGGTCTGGACGGGCTTGGATaGCCTCCAGTTCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: MYSETSRSLHTTSATQVGLDGLG*PPVPQD
Trigger: GTCCTGGGGAACTGGAGGCCATCCAAGCCCGTCCAG...ACCTACCTGTGTAGCCGAAGTAGTGTGCAGTGACCGAGACGTTTCTGAATACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGGGCGAAAGGGTTCCTaGATTGCCCATATCCATGTC +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFGRKGS*IAHIHV
Trigger: GACATGGATATGGGCAATCCAGGAACCCTTTCGCCC...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACGGGCGAAAGGGTTCCTaGATTGCCCATATCCATGTC +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHGRKGS*IAHIHV
Trigger: GACATGGATATGGGCAATCCAGGAACCCTTTCGCCC...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGGGAGCCAGGTTTGGTaGGCGAAAGGGTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSGSQVW*AKGFLD
Trigger: ATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCC...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATGGGAGCCAGGTTTGGTaGGCGAAAGGGTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDGSQVW*AKGFLD
Trigger: ATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCC...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCATGTAGTCGGCAGTGCTaGCTGAAGGAGCGTAGACTG +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFACSRQC*LKERRL
Trigger: CAGTCTACGCTCCTTCAGCCAGCACTGCCGACTACA...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGGAGGAAGGATAGCCTaGCGAGTCCCTGTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSGGRIA*RVPVVV
Trigger: GACTACAACAGGGACTCGCCAGGCTATCCTTCCTCC...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGGAAAGTGCTGGCTGCTaGCTTGGAGGAAGGATAGCC +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQESAGC*LGGRIA
Trigger: GGCTATCCTTCCTCCAAGCCAGCAGCCAGCACTTTC...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCAGAAAGTGCTGGCTGCTaGCTTGGAGGAAGGATAGCC +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFAESAGC*LGGRIA
Trigger: GGCTATCCTTCCTCCAAGCCAGCAGCCAGCACTTTC...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGGAAAGTGCTGGCTGCTaGCTTGGAGGAAGGATAGCC +
Preference number: 4 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVESAGC*LGGRIA
Trigger: GGCTATCCTTCCTCCAAGCCAGCAGCCAGCACTTTC...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GGTCAGCATTTCGTCCTGCACTGCCCCTCCGGAAGCAGAGTTGGCACTACAGGTGTAGCTGCTGGACTGTaGGATATGAGAAGAATTGCC +
Preference number: 4 (lower is better)
Translates to: GQHFVLHCPSGSRVGTTGVAAGL*DMRRIA
Trigger: GGCAATTCTTCTCATATCCCACAGTCCAGCAGCTAC...ACCTGTAGTGCCAACTCTGCTTCCGGAGGGGCAGTGCAGGACGAAATGCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACCACTACGATGGAACGTaGACATCGGAGGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHHYDGT*TSEEDW
Trigger: CCAGTCTTCCTCCGATGTCCACGTTCCATCGTAGTG...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCCACTACGATGGAACGTaGACATCGGAGGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFHYDGT*TSEEDW
Trigger: CCAGTCTTCCTCCGATGTCCACGTTCCATCGTAGTG...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GTACCTCTGAAAATCCCAGGGGAGGGTAACAAGGGCAGCGCCACAAGCCAGACAAGGGTCCTTCATAATTaGGAGATGACGAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: VPLKIPGEGNKGSATSQTRVLHN*EMTRPV
Trigger: GACAGGCCTCGTCATCTCCCAATTATGAAGGACCCT...TGTCTGGCTTGTGGCGCTGCCCTTGTTACCCTCCCCTGGGATTTTCAGAGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGCACCAGGCACAGCTGTaGACGGGCCCACTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQHQAQL*TGPLRG
Trigger: ACCACGCAGTGGGCCCGTCCACAGCTGTGCCTGGTG...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCATTTGGCAGGAGAGAATaGCTGCCTCTCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFAFGRRE*LPLRAT
Trigger: CGTGGCTCTGAGAGGCAGCCATTCTCTCCTGCCAAA...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGTTTGGCAGGAGAGAATaGCTGCCTCTCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQFGRRE*LPLRAT
Trigger: CGTGGCTCTGAGAGGCAGCCATTCTCTCCTGCCAAA...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACTTTGGCAGGAGAGAATaGCTGCCTCTCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYFGRRE*LPLRAT
Trigger: CGTGGCTCTGAGAGGCAGCCATTCTCTCCTGCCAAA...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGTTTGGCAGGAGAGAATaGCTGCCTCTCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVFGRRE*LPLRAT
Trigger: CGTGGCTCTGAGAGGCAGCCATTCTCTCCTGCCAAA...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGTAAGGGTCTTGGGGTaGGTTCAAGTCAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFVRVLG*VQVRGS
Trigger: ACTTCCCCTGACTTGAACCCACCCCAAGACCCTTAC...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACGTAAGGGTCTTGGGGTaGGTTCAAGTCAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHVRVLG*VQVRGS
Trigger: ACTTCCCCTGACTTGAACCCACCCCAAGACCCTTAC...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCGTAAGGGTCTTGGGGTaGGTTCAAGTCAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRVRVLG*VQVRGS
Trigger: ACTTCCCCTGACTTGAACCCACCCCAAGACCCTTAC...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTACTGGCCCTGGAGGCCTaGTGGCATCCCTCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLLALEA*WHPSVR
Trigger: CCTTACAGAGGGATGCCACCAGGCCTCCAGGGCCAG...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCCCAGAAGACACGCTCTaGCCCTGGAGGCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLPEDTL*PWRPGG
Trigger: GCCACCAGGCCTCCAGGGCCAGAGCGTGTCTTCTGG...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGCCAGAAGACACGCTCTaGCCCTGGAGGCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQPEDTL*PWRPGG
Trigger: GCCACCAGGCCTCCAGGGCCAGAGCGTGTCTTCTGG...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTCCAGAAGACACGCTCTaGCCCTGGAGGCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSPEDTL*PWRPGG
Trigger: GCCACCAGGCCTCCAGGGCCAGAGCGTGTCTTCTGG...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCTCACGGGCATTATTaGCCATCCTCCGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFAHGHY*PSSVPS
Trigger: AGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGC...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACTTGTCGCTCTTCAGGTaGAGCTGCACCATACGGCCA +
Preference number: 4 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYLSLFR*SCTIRP
Trigger: TGGCCGTATGGTGCAGCTCCACCTGAAGAGCGACAA...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGTTGTCGCTCTTCAGGTaGAGCTGCACCATACGGCCA +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQLSLFR*SCTIRP
Trigger: TGGCCGTATGGTGCAGCTCCACCTGAAGAGCGACAA...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGTTGTCGCTCTTCAGGTaGAGCTGCACCATACGGCCA +
Preference number: 4 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVLSLFR*SCTIRP
Trigger: TGGCCGTATGGTGCAGCTCCACCTGAAGAGCGACAA...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCAATCAGGAGCTTGGTCTaGGGCTTGTCGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFAIRSLV*GLSLFR
Trigger: CCTGAAGAGCGACAAGCCCCAGACCAAGCTCCTGAT...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATCAGGAGCTTGGTCTaGGGCTTGTCGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVIRSLV*GLSLFR
Trigger: CCTGAAGAGCGACAAGCCCCAGACCAAGCTCCTGAT...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCAATGACAGCCACGGCCTaGTGGAGAATCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFAMTATA*WRIRSL
Trigger: CAAGCTCCTGATTCTCCACCAGGCCGTGGCTGTCAT...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TCCGGAGAACATGAATCGCATCGTCCAGTCTTTCCAAACGGTCTTCGATTCGGCTGTAGTCGGCAGTGCTaGCTGAAGGAGCGTAGACCG +
Preference number: 4 (lower is better)
Translates to: SGEHESHRPVFPNGLRFGCSRQC*LKERRP
Trigger: CGGTCTACGCTCCTTCAGCCAGCACTGCCGACTACA...GCCGAATCGAAGACCGTTTGGAAAGACTGGACGATGCGATTCATGTTCTCCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
3UTR CAA 72 bp GAGGCACCCTTTTCAAGGCTCTCTTCAGAGCTTAACTaGCTGAGTACCAACAGAGGCCTGGAGCCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: EAPFSRLSSELN*LSTNRGLEPSG
Trigger: GCCAGAAGGCTCCAGGCCTCTGTTGGTACTCAGCAAGTTAAGCTCTGAAGAGAGCCTTGAAAAGGGTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR TCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTTCCCCAGGACCCTaGGCTACTTCTGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQSSPGP*ATSVFY
Trigger: GTAGAAGACAGAAGTAGCTCAGGGTCCTGGGGAACT...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
CDS-3UTR TCA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGAGTTCCCCAGGACCCTaGGCTACTTCTGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVSSPGP*ATSVFY
Trigger: GTAGAAGACAGAAGTAGCTCAGGGTCCTGGGGAACT...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
CDS-3UTR TCA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTCCATGGCACTACTGTaGAGAGGCCTCCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQSMALL*RGLRRA
Trigger: TGCCCGCCGGAGGCCTCTTCACAGTAGTGCCATGGA...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGGAGCCCACAGGAGTTaGAGGATTGGAGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSGAHRS*RIGGKA
Trigger: AGCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCC...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp TGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATCCGGTAATTTGTGGGAGGGTCCCATaGTCCCATGCATGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: CWFCYEGSRASPIQYPVICGRVP*SHACPH
Trigger: ATGGGGACATGCATGGGATCATGGGACCCTCCCACA...AATTACCGGATATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTCACATCTGTCCCATGTaGTTCGCTGCGTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSHICPM*FAASPI
Trigger: GATGGGAGACGCAGCGAATCACATGGGACAGATGTG...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp GCATCAGCGTGCCCCCTCCTCAGCCCCAGGTATCACAGGTTCCCAGAATGCTTGTCTGTCTTCTACATTTaGGCCAGTGAAATGTCCACT +
Preference number: 4 (lower is better)
Translates to: ASACPLLSPRYHRFPECLSVFYI*ASEMST
Trigger: AGTGGACATTTCACTGGCTCAAATGTAGAAGACAGA...CAAGCATTCTGGGAACCTGTGATACCTGGGGCTGAGGAGGGGGCACGCTGATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR GCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCAAAGGGTTCCTGGATTaGCCATATCCATGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFKGFLD*PYPCPL
Trigger: GAGGGGACATGGATATGGGCAATCCAGGAACCCTTT...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGTGTTGTAGTCGGCAGTaGTGGCTGAAGGAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVCCSRQ*WLKERR
Trigger: TCTACGCTCCTTCAGCCAGCACTGCCGACTACAACA...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCATGTTGTAGTCGGCAGTaGTGGCTGAAGGAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSCCSRQ*WLKERR
Trigger: TCTACGCTCCTTCAGCCAGCACTGCCGACTACAACA...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGGGAAAGTGCTGGCTaGTGGCTTGGAGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQRESAG*WLGGRI
Trigger: TATCCTTCCTCCAAGCCAGCAGCCAGCACTTTCCCT...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATAGCTCCAAGGGTCGCTaGTGTGATGGCCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDSSKGR*CDGHLA
Trigger: TGCAAGATGGCCATCACAGCAGCGACCCTTGGAGCT...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTAGCTCCAAGGGTCGCTaGTGTGATGGCCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSSSKGR*CDGHLA
Trigger: TGCAAGATGGCCATCACAGCAGCGACCCTTGGAGCT...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACGTGTGCAGGAAGAGGTaGTGTAATGGTTTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHVCRKR*CNGLCH
Trigger: GTGGCACAAACCATTACAGCACCTCTTCCTGCACAC...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTCGTTGGCAGGGGGTGTaGAGGAAGAGGTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSRWQGV*RKRCCN
Trigger: ATTACAGCACCTCTTCCTGCACACCCCCTGCCAACG...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GGTCAGCATTTCGTCCTGCACTGCCCCTCCGGAAGCAGAGTTGGCACTACAGGTCCCAGTTCCTCTGTTTaGCATTATACTGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GQHFVLHCPSGSRVGTTGPSSSV*HYTVCS
Trigger: GGAACAGACAGTATAATGGCAAACAGAGGAACTGGG...ACCTGTAGTGCCAACTCTGCTTCCGGAGGGGCAGTGCAGGACGAAATGCTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp CTCGCCCGGGCAATGCTGCATGTAATTCCTACACATGATGTGACTTTTAAGTCCCTGCGAGCTGCCTGCTaGCCCAGTTCCTCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: LARAMLHVIPTHDVTFKSLRAAC*PSSSVC
Trigger: GCAAACAGAGGAACTGGGGCAGCAGGCAGCTCGCAG...GGACTTAAAAGTCACATCATGTGTAGGAATTACATGCAGCATTGCCCGGGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTACTGCGAGCTGCCTGCTaGCCCAGTTCCTCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLLRAAC*PSSSVC
Trigger: GCAAACAGAGGAACTGGGGCAGCAGGCAGCTCGCAG...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACTCTTCGATTCGGCTTTaGAGTGAGTGCAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHSSIRL*SECKGP
Trigger: AGGACCCTTGCACTCACTGCAAAGCCGAATCGAAGA...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTCTTCGATTCGGCTTTaGAGTGAGTGCAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRSSIRL*SECKGP
Trigger: AGGACCCTTGCACTCACTGCAAAGCCGAATCGAAGA...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTATGTGGACGGGCCCACTaGGTGGTTCCGGAGAACATG +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLCGRAH*VVPENM
Trigger: CATGTTCTCCGGAACCACGCAGTGGGCCCGTCCACA...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGCAAGTCAGGGGAAGTTaGAGACTGGACCGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVQVRGS*RLDRKL
Trigger: CAACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTG...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CTCGCCCGGGCAATGCTGCATGTAATTCCTACACATGATGTGACTTTTAAGTCCTCGCGCTCAGCCTTCTaGTCTGGGGTCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LARAMLHVIPTHDVTFKSSRSAF*SGVRSS
Trigger: TGAGGACCTGACCCCAGAGCAGAAGGCTGAGCGCGA...GGACTTAAAAGTCACATCATGTGTAGGAATTACATGCAGCATTGCCCGGGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACCTTTCTCGAACTTGCTaGTCCAGGCTGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHLSRTC*SRLRMT
Trigger: TGTCATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAG...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CATCGTTCAGGGAGGAGGGGAAGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGTCCCATGTGATTCGCTaGGTCTCCCATCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: HRSGRRGSYCLSSLPFLESHVIR*VSHPRV
Trigger: CACCCTGGGATGGGAGACGCAGCGAATCACATGGGA...CTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTCCCCTCCTCCCTGAACGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGCTGGACGGGCTTGGATaGCCTCCAGTTCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQLDGLG*PPVPQD
Trigger: GTCCTGGGGAACTGGAGGCCATCCAAGCCCGTCCAG...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
CDS-3UTR CCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAGTTCCTGGACGGGCTTaGATGGCCTCCAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLVPGRA*MASSSP
Trigger: TGGGGAACTGGAGGCCATCCAAGCCCGTCCAGGAAC...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
CDS-3UTR CCA 90 bp TGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATCCGGTAATTACTGGGAGCCAGGTTTaGTGGGCGAAAGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: CWFCYEGSRASPIQYPVITGSQV*WAKGFL
Trigger: CAGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGT...AATTACCGGATATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTGTCTGTACCTCCATaGCACTACTGTGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRLSVPP*HYCEEA
Trigger: GGCCTCTTCACAGTAGTGCCATGGAGGTACAGACAA...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACTTGTCTGTACCTCCATaGCACTACTGTGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHLSVPP*HYCEEA
Trigger: GGCCTCTTCACAGTAGTGCCATGGAGGTACAGACAA...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATTGTAGTCGGCAGTGCTaGCTGAAGGAGCGTAGACTG +
Preference number: 4 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDCSRQC*LKERRL
Trigger: CAGTCTACGCTCCTTCAGCCAGCACTGCCGACTACA...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATGGAGGAAGGATAGCCTaGCGAGTCCCTGTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDGGRIA*RVPVVV
Trigger: GACTACAACAGGGACTCGCCAGGCTATCCTTCCTCC...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTATGCTGGCTGCTGGCTTaGAGGAAGGATAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLCWLLA*RKDSLA
Trigger: CGCCAGGCTATCCTTCCTCCAAGCCAGCAGCCAGCA...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp ATCGCATCGTCCAGTCTTTCCAAACGGTCTTCGATTCGGCTTTGCAGTGAGTGCGAAAGTGCTGGCTGCTaGCTTGGAGGAAGGATAGCC +
Preference number: 4 (lower is better)
Translates to: IASSSLSKRSSIRLCSECESAGC*LGGRIA
Trigger: GGCTATCCTTCCTCCAAGCCAGCAGCCAGCACTTTC...GCACTCACTGCAAAGCCGAATCGAAGACCGTTTGGAAAGACTGGACGATGCGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
CDS-3UTR CCA 90 bp CTCGCCCGGGCAATGCTGCATGTAATTCCTACACATGATGTGACTTTTAAGTCCGCTGATTCATCCCGCTaGAGGAGCTCCAAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: LARAMLHVIPTHDVTFKSADSSR*RSSKGR
Trigger: GCGACCCTTGGAGCTCCTCCAGCGGGATGAATCAGC...GGACTTAAAAGTCACATCATGTGTAGGAATTACATGCAGCATTGCCCGGGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAGCTGATTCATCCCGCTaGAGGAGCTCCAAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLADSSR*RSSKGR
Trigger: GCGACCCTTGGAGCTCCTCCAGCGGGATGAATCAGC...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CTTCTTTTCAGACAGGCAGCTTTCGGGTTCAGATTCCTTTCTCGAACTTGCTGCGCTGATTCATCCCGCTaGAGGAGCTCCAAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: LLFRQAAFGFRFLSRTCCADSSR*RSSKGR
Trigger: GCGACCCTTGGAGCTCCTCCAGCGGGATGAATCAGC...GCAGCAAGTTCGAGAAAGGAATCTGAACCCGAAAGCTGCCTGTCTGAAAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR CCA 90 bp GTACCTCTGAAAATCCCAGGGGAGGGTAACAAGGGCAGCGCCACAAGCCAGACAGTAGCTGCTGGACTGTaGGATATGAGAAGAATTGCC +
Preference number: 4 (lower is better)
Translates to: VPLKIPGEGNKGSATSQTVAAGL*DMRRIA
Trigger: GGCAATTCTTCTCATATCCCACAGTCCAGCAGCTAC...TGTCTGGCTTGTGGCGCTGCCCTTGTTACCCTCCCCTGGGATTTTCAGAGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCGGCTACAGTAGCTGCTaGACTGTGGGATATGAGAAG +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRGYSSC*TVGYEK
Trigger: CTTCTCATATCCCACAGTCCAGCAGCTACTGTAGCC...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCACACTACGATGGAACGTaGACATCGGAGGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSHYDGT*TSEEDW
Trigger: CCAGTCTTCCTCCGATGTCCACGTTCCATCGTAGTG...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACACTACGATGGAACGTaGACATCGGAGGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFAHYDGT*TSEEDW
Trigger: CCAGTCTTCCTCCGATGTCCACGTTCCATCGTAGTG...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGCACCAGGCACAGCTGTaGACGGGCCCACTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLHQAQL*TGPLRG
Trigger: ACCACGCAGTGGGCCCGTCCACAGCTGTGCCTGGTG...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATTTTGGCAGGAGAGAATaGCTGCCTCTCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDFGRRE*LPLRAT
Trigger: CGTGGCTCTGAGAGGCAGCCATTCTCTCCTGCCAAA...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGGTAAGGGTCTTGGGGTaGGTTCAAGTCAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQVRVLG*VQVRGS
Trigger: ACTTCCCCTGACTTGAACCCACCCCAAGACCCTTAC...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTGCCCTGGAGGCCTGGTaGCATCCCTCTGTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSALEAW*HPSVRV
Trigger: GACCCTTACAGAGGGATGCCACCAGGCCTCCAGGGC...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCCTGGCCCTGGAGGCCTaGTGGCATCCCTCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLLALEA*WHPSVR
Trigger: CCTTACAGAGGGATGCCACCAGGCCTCCAGGGCCAG...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTCTGGCCCTGGAGGCCTaGTGGCATCCCTCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSLALEA*WHPSVR
Trigger: CCTTACAGAGGGATGCCACCAGGCCTCCAGGGCCAG...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGGACACGCTCTGGCCCTaGAGGCCTGGTGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLDTLWP*RPGGIP
Trigger: AGGGATGCCACCAGGCCTCCAGGGCCAGAGCGTGTC...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGGCTCACGGGCATTATTaGCCATCCTCCGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVAHGHY*PSSVPS
Trigger: AGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGC...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGGCTCACGGGCATTATTaGCCATCCTCCGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQAHGHY*PSSVPS
Trigger: AGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGC...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGCTCACGGGCATTATTaGCCATCCTCCGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSAHGHY*PSSVPS
Trigger: AGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGC...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCAGCTCACGGGCATTATTaGCCATCCTCCGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFAAHGHY*PSSVPS
Trigger: AGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGC...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATTTGTCGCTCTTCAGGTaGAGCTGCACCATACGGCCA +
Preference number: 4 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDLSLFR*SCTIRP
Trigger: TGGCCGTATGGTGCAGCTCCACCTGAAGAGCGACAA...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TCAGGACGTTTGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATTGTCGCTCTTCAGGTaGAGCTGCACCATACGGCCA +
Preference number: 4 (lower is better)
Translates to: SGRLLVLLRGQPGFPYSILSLFR*SCTIRP
Trigger: TGGCCGTATGGTGCAGCTCCACCTGAAGAGCGACAA...TATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCAAACGTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTATCAGGAGCTTGGTCTaGGGCTTGTCGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSIRSLV*GLSLFR
Trigger: CCTGAAGAGCGACAAGCCCCAGACCAAGCTCCTGAT...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATCAGGAGCTTGGTCTaGGGCTTGTCGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDIRSLV*GLSLFR
Trigger: CCTGAAGAGCGACAAGCCCCAGACCAAGCTCCTGAT...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTATGACAGCCACGGCCTaGTGGAGAATCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSMTATA*WRIRSL
Trigger: CAAGCTCCTGATTCTCCACCAGGCCGTGGCTGTCAT...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp TACCTTCTCCACATTCTAGATGCGGCACACACAGCAGCTCTGGGCGCACGGAACGCGGGCATTATTGCTTaGATACTGATAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: YLLHILDAAHTAALGARNAGIIA*ILIVLG
Trigger: TCCCAGTACTATCAGTATTCAAGCAATAATGCCCGC...GTTCCGTGCGCCCAGAGCTGCTGTGTGTGCCGCATCTAGAATGTGGAGAAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR TCA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGCTGGACTGTGGGATATaGGAAGAATTGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVLDCGI*EELPSI
Trigger: GATGCTGGGCAATTCTTCTCATATCCCACAGTCCAG...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGGAGCCCACAGGAGTTaGAGGATTGGAGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSGAHRS*RIGGKA
Trigger: AGCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCC...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp TCAGGACGTTTGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATAGGAGCCCACAGGAGTTaGAGGATTGGAGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: SGRLLVLLRGQPGFPYSIGAHRS*RIGGKA
Trigger: AGCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCC...TATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCAAACGTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATGGAGCCCACAGGAGTTaGAGGATTGGAGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDGAHRS*RIGGKA
Trigger: AGCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCC...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCATAATTGGGAGATaGCGAGGCCTGTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRFIIGR*RGLSSI
Trigger: AATGGAGGACAGGCCTCGTCATCTCCCAATTATGAA...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCATGGTTCCGGAGAACATaGATCGCATCGTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSWFRRT*IASSSL
Trigger: AAGACTGGACGATGCGATTCATGTTCTCCGGAACCA...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACTGGTTCCGGAGAACATaGATCGCATCGTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYWFRRT*IASSSL
Trigger: AAGACTGGACGATGCGATTCATGTTCTCCGGAACCA...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCATGGTTCCGGAGAACATaGATCGCATCGTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFAWFRRT*IASSSL
Trigger: AAGACTGGACGATGCGATTCATGTTCTCCGGAACCA...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp ATGTATTCAGAAACGTCTCGGTCACTGCACACTACTTCGGCTACACAGGTAGGTTGTGGGAGGGTCCCATaGTCCCATGCATGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: MYSETSRSLHTTSATQVGCGRVP*SHACPH
Trigger: ATGGGGACATGCATGGGATCATGGGACCCTCCCACA...ACCTACCTGTGTAGCCGAAGTAGTGTGCAGTGACCGAGACGTTTCTGAATACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp TGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATCCGGTAATTCACATCTGTCCCATGTaGTTCGCTGCGTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: CWFCYEGSRASPIQYPVIHICPM*FAASPI
Trigger: GATGGGAGACGCAGCGAATCACATGGGACAGATGTG...AATTACCGGATATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACAAAGGGTTCCTGGATTaGCCATATCCATGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYKGFLD*PYPCPL
Trigger: GAGGGGACATGGATATGGGCAATCCAGGAACCCTTT...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp AGCGTGCCCCCTCCTCAGCCCCAGGTATCACAGGTTCCCAGAATGCTTGGGTTTTCCGGCGGGCATTATTaGTTGAATACTGATAGTACT +
Preference number: 4 (lower is better)
Translates to: SVPPPQPQVSQVPRMLGFSGGHY*LNTDST
Trigger: AGTACTATCAGTATTCAAGCAATAATGCCCGCCGGA...AAACCCAAGCATTCTGGGAACCTGTGATACCTGGGGCTGAGGAGGGGGCACGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR GCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTTGTTGTAGTCGGCAGTaGTGGCTGAAGGAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSCCSRQ*WLKERR
Trigger: TCTACGCTCCTTCAGCCAGCACTGCCGACTACAACA...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTAGGGAAAGTGCTGGCTaGTGGCTTGGAGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSRESAG*WLGGRI
Trigger: TATCCTTCCTCCAAGCCAGCAGCCAGCACTTTCCCT...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TCAGGACGTTTGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATAGCAGGCTACAGTAGCTaGTGGACTGTGGGATATGAG +
Preference number: 4 (lower is better)
Translates to: SGRLLVLLRGQPGFPYSIAGYSS*WTVGYE
Trigger: CTCATATCCCACAGTCCAGCAGCTACTGTAGCCTGC...TATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCAAACGTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTGCTGTAATGGTTTGTaGCACTACGATGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRCCNGL*HYDGTW
Trigger: CCACGTTCCATCGTAGTGGCACAAACCATTACAGCA...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACGTGTGCAGGAAGAGGTaGTGTAATGGTTTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYVCRKR*CNGLCH
Trigger: GTGGCACAAACCATTACAGCACCTCTTCCTGCACAC...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGTGTGCAGGAAGAGGTaGTGTAATGGTTTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSVCRKR*CNGLCH
Trigger: GTGGCACAAACCATTACAGCACCTCTTCCTGCACAC...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGGTGTGCAGGAAGAGGTaGTGTAATGGTTTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVVCRKR*CNGLCH
Trigger: GTGGCACAAACCATTACAGCACCTCTTCCTGCACAC...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TTCCAAAAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCCTGCGAGCTGCCTGCTaGCCCAGTTCCTCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: FQKKFRHKCIAPQCGRIALRAAC*PSSSVC
Trigger: GCAAACAGAGGAACTGGGGCAGCAGGCAGCTCGCAG...GGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTTTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR GCA 90 bp CTCGCCCGGGCAATGCTGCATGTAATTCCTACACATGATGTGACTTTTAAGTCCAGTCTGCGAGCTGCCTaGTGCCCCAGTTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: LARAMLHVIPTHDVTFKSSLRAA*CPSSSV
Trigger: AACAGAGGAACTGGGGCAGCAGGCAGCTCGCAGACT...GGACTTAAAAGTCACATCATGTGTAGGAATTACATGCAGCATTGCCCGGGCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGTCTTCGATTCGGCTTTaGAGTGAGTGCAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQSSIRL*SECKGP
Trigger: AGGACCCTTGCACTCACTGCAAAGCCGAATCGAAGA...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCTGTGGACGGGCCCACTaGGTGGTTCCGGAGAACATG +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLCGRAH*VVPENM
Trigger: CATGTTCTCCGGAACCACGCAGTGGGCCCGTCCACA...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTGTGGACGGGCCCACTaGGTGGTTCCGGAGAACATG +
Preference number: 4 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQCGRAH*VVPENM
Trigger: CATGTTCTCCGGAACCACGCAGTGGGCCCGTCCACA...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCGAAGATTTTGTGTCTTaGAGGTTCTCATCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYREDFVS*RFSSPS
Trigger: CGAGGGCGATGAGAACCTGCAAGACACAAAATCTTC...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACGAAGATTTTGTGTCTTaGAGGTTCTCATCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHEDFVS*RFSSPS
Trigger: CGAGGGCGATGAGAACCTGCAAGACACAAAATCTTC...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp AGAGTTGGCACTACAGGTTACGATAACAAACCGGGGGAAGGGACAAAAATCAGATCGCGCTCAGCCTTCTaGTCTGGGGTCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: RVGTTGYDNKPGEGTKIRSRSAF*SGVRSS
Trigger: TGAGGACCTGACCCCAGAGCAGAAGGCTGAGCGCGA...TCTGATTTTTGTCCCTTCCCCCGGTTTGTTATCGTAACCTGTAGTGCCAACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp TTCCAAAAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCTCGCGCTCAGCCTTCTaGTCTGGGGTCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: FQKKFRHKCIAPQCGRIASRSAF*SGVRSS
Trigger: TGAGGACCTGACCCCAGAGCAGAAGGCTGAGCGCGA...GGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTTTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR GCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCTCGCGCTCAGCCTTCTaGTCTGGGGTCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLSRSAF*SGVRSS
Trigger: TGAGGACCTGACCCCAGAGCAGAAGGCTGAGCGCGA...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGCTTTCTCGAACTTGCTaGTCCAGGCTGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQLSRTC*SRLRMT
Trigger: TGTCATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAG...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCACTTTCTCGAACTTGCTaGTCCAGGCTGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSLSRTC*SRLRMT
Trigger: TGTCATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAG...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGCTTTCTCGAACTTGCTaGTCCAGGCTGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVLSRTC*SRLRMT
Trigger: TGTCATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAG...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCTTTCTCGAACTTGCTaGTCCAGGCTGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYLSRTC*SRLRMT
Trigger: TGTCATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAG...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GTACCTCTGAAAATCCCAGGGGAGGGTAACAAGGGCAGCGCCACAAGCCAGACAACTCGCCAAAGAAGTTaGTCCATTTTTCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: VPLKIPGEGNKGSATSQTTRQRS*SIFPTA
Trigger: AGCAGTGGGAAAAATGGACCAACTTCTTTGGCGAGT...TGTCTGGCTTGTGGCGCTGCCCTTGTTACCCTCCCCTGGGATTTTCAGAGGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp TACCTTCTCCACATTCTAGATGCGGCACACACAGCAGCTCTGGGCGCACGGAACACTCGCCAAAGAAGTTaGTCCATTTTTCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: YLLHILDAAHTAALGARNTRQRS*SIFPTA
Trigger: AGCAGTGGGAAAAATGGACCAACTTCTTTGGCGAGT...GTTCCGTGCGCCCAGAGCTGCTGTGTGTGCCGCATCTAGAATGTGGAGAAGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR CCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGCTGGACGGGCTTGGATaGCCTCCAGTTCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLLDGLG*PPVPQD
Trigger: GTCCTGGGGAACTGGAGGCCATCCAAGCCCGTCCAG...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
CDS-3UTR CCA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGGTTCCTGGACGGGCTTaGATGGCCTCCAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQVPGRA*MASSSP
Trigger: TGGGGAACTGGAGGCCATCCAAGCCCGTCCAGGAAC...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
CDS-3UTR CCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCGTTCCTGGACGGGCTTaGATGGCCTCCAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLVPGRA*MASSSP
Trigger: TGGGGAACTGGAGGCCATCCAAGCCCGTCCAGGAAC...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
CDS-3UTR CCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGGGCGAAAGGGTTCCTaGATTGCCCATATCCATGTC +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSGRKGS*IAHIHV
Trigger: GACATGGATATGGGCAATCCAGGAACCCTTTCGCCC...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CTCGCCCGGGCAATGCTGCATGTAATTCCTACACATGATGTGACTTTTAAGTCCGGGAGCCAGGTTTGGTaGGCGAAAGGGTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: LARAMLHVIPTHDVTFKSGSQVW*AKGFLD
Trigger: ATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCC...GGACTTAAAAGTCACATCATGTGTAGGAATTACATGCAGCATTGCCCGGGCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp CTCGCCCGGGCAATGCTGCATGTAATTCCTACACATGATGTGACTTTTAAGTCCACTGGGAGCCAGGTTTaGTGGGCGAAAGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LARAMLHVIPTHDVTFKSTGSQV*WAKGFL
Trigger: CAGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGT...GGACTTAAAAGTCACATCATGTGTAGGAATTACATGCAGCATTGCCCGGGCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCATTGTCTGTACCTCCATaGCACTACTGTGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFALSVPP*HYCEEA
Trigger: GGCCTCTTCACAGTAGTGCCATGGAGGTACAGACAA...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGAGTTGGCACTACAGGTTACGATAACAAACCGGGGGAAGGGACAAAAATCAGATGCTGGCTGCTGGCTTaGAGGAAGGATAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: RVGTTGYDNKPGEGTKIRCWLLA*RKDSLA
Trigger: CGCCAGGCTATCCTTCCTCCAAGCCAGCAGCCAGCA...TCTGATTTTTGTCCCTTCCCCCGGTTTGTTATCGTAACCTGTAGTGCCAACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTGCTGGCTGCTGGCTTaGAGGAAGGATAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQCWLLA*RKDSLA
Trigger: CGCCAGGCTATCCTTCCTCCAAGCCAGCAGCCAGCA...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TTCCAAAAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCGCTGATTCATCCCGCTaGAGGAGCTCCAAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: FQKKFRHKCIAPQCGRIAADSSR*RSSKGR
Trigger: GCGACCCTTGGAGCTCCTCCAGCGGGATGAATCAGC...GGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTTTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR CCA 90 bp AGAGTTGGCACTACAGGTTACGATAACAAACCGGGGGAAGGGACAAAAATCAGAGCTGATTCATCCCGCTaGAGGAGCTCCAAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: RVGTTGYDNKPGEGTKIRADSSR*RSSKGR
Trigger: GCGACCCTTGGAGCTCCTCCAGCGGGATGAATCAGC...TCTGATTTTTGTCCCTTCCCCCGGTTTGTTATCGTAACCTGTAGTGCCAACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGGCTGATTCATCCCGCTaGAGGAGCTCCAAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQADSSR*RSSKGR
Trigger: GCGACCCTTGGAGCTCCTCCAGCGGGATGAATCAGC...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCGTAGCTGCTGGACTGTaGGATATGAGAAGAATTGCC +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRVAAGL*DMRRIA
Trigger: GGCAATTCTTCTCATATCCCACAGTCCAGCAGCTAC...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCAGGCTACAGTAGCTGCTaGACTGTGGGATATGAGAAG +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFAGYSSC*TVGYEK
Trigger: CTTCTCATATCCCACAGTCCAGCAGCTACTGTAGCC...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGGGCTACAGTAGCTGCTaGACTGTGGGATATGAGAAG +
Preference number: 4 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVGYSSC*TVGYEK
Trigger: CTTCTCATATCCCACAGTCCAGCAGCTACTGTAGCC...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACGGCTACAGTAGCTGCTaGACTGTGGGATATGAGAAG +
Preference number: 4 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYGYSSC*TVGYEK
Trigger: CTTCTCATATCCCACAGTCCAGCAGCTACTGTAGCC...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCGCTCAAACGTTCATGTaGATGCAGGCTACAGTAGCT +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRAQTFM*MQATVA
Trigger: AGCTACTGTAGCCTGCATCCACATGAACGTTTGAGC...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATCACTACGATGGAACGTaGACATCGGAGGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDHYDGT*TSEEDW
Trigger: CCAGTCTTCCTCCGATGTCCACGTTCCATCGTAGTG...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTCACTACGATGGAACGTaGACATCGGAGGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSHYDGT*TSEEDW
Trigger: CCAGTCTTCCTCCGATGTCCACGTTCCATCGTAGTG...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCATTTGTGCCACTACGATaGAACGTGGACATCGGAGGA +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFAFVPLR*NVDIGG
Trigger: TCCTCCGATGTCCACGTTCCATCGTAGTGGCACAAA...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGTTTGTGCCACTACGATaGAACGTGGACATCGGAGGA +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQFVPLR*NVDIGG
Trigger: TCCTCCGATGTCCACGTTCCATCGTAGTGGCACAAA...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAAGGGTCCTTCATAATTaGGAGATGACGAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSRVLHN*EMTRPV
Trigger: GACAGGCCTCGTCATCTCCCAATTATGAAGGACCCT...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACAGGGTCCTTCATAATTaGGAGATGACGAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYRVLHN*EMTRPV
Trigger: GACAGGCCTCGTCATCTCCCAATTATGAAGGACCCT...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCACCAGGCACAGCTGTaGACGGGCCCACTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDHQAQL*TGPLRG
Trigger: ACCACGCAGTGGGCCCGTCCACAGCTGTGCCTGGTG...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCACCAGGCACAGCTGTaGACGGGCCCACTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLHQAQL*TGPLRG
Trigger: ACCACGCAGTGGGCCCGTCCACAGCTGTGCCTGGTG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGACACGCTCTGGCCCTaGAGGCCTGGTGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLDTLWP*RPGGIP
Trigger: AGGGATGCCACCAGGCCTCCAGGGCCAGAGCGTGTC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGACACGCTCTGGCCCTaGAGGCCTGGTGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDDTLWP*RPGGIP
Trigger: AGGGATGCCACCAGGCCTCCAGGGCCAGAGCGTGTC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCCAGAAGACACGCTCTaGCCCTGGAGGCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDPEDTL*PWRPGG
Trigger: GCCACCAGGCCTCCAGGGCCAGAGCGTGTCTTCTGG...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCCAGAAGACACGCTCTaGCCCTGGAGGCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLPEDTL*PWRPGG
Trigger: GCCACCAGGCCTCCAGGGCCAGAGCGTGTCTTCTGG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGTCCCATCCCAGGGTGTaGGCCAGCCAAGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLSHPRV*ASQGEW
Trigger: CCACTCTCCTTGGCTGGCCCACACCCTGGGATGGGA...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp ATGTATTCAGAAACGTCTCGGTCACTGCACACTACTTCGGCTACACAGGTAGGTTGTAGTCGGCAGTGCTaGCTGAAGGAGCGTAGACCG +
Preference number: 4 (lower is better)
Translates to: MYSETSRSLHTTSATQVGCSRQC*LKERRP
Trigger: CGGTCTACGCTCCTTCAGCCAGCACTGCCGACTACA...ACCTACCTGTGTAGCCGAAGTAGTGTGCAGTGACCGAGACGTTTCTGAATACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114977.5
CDS-3UTR CCA 90 bp CTTCTTTTCAGACAGGCAGCTTTCGGGTTCAGATTCCTTTCTCGAACTTGCTGCTGTAGTCGGCAGTGCTaGCTGAAGGAGCGTAGACCG +
Preference number: 4 (lower is better)
Translates to: LLFRQAAFGFRFLSRTCCCSRQC*LKERRP
Trigger: CGGTCTACGCTCCTTCAGCCAGCACTGCCGACTACA...GCAGCAAGTTCGAGAAAGGAATCTGAACCCGAAAGCTGCCTGTCTGAAAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR TCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCAAGAGAGATTGTCATGTaGCCCAAGATCCCTGCTAGT +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFAREIVM*PKIPAS
Trigger: ACTAGCAGGGATCTTGGGTCACATGACAATCTCTCT...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACGCGGGCATTATTGCTTaGATACTGATAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHAGIIA*ILIVLG
Trigger: TCCCAGTACTATCAGTATTCAAGCAATAATGCCCGC...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTCCATGGCACTACTGTaGAGAGGCCTCCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLSMALL*RGLRRA
Trigger: TGCCCGCCGGAGGCCTCTTCACAGTAGTGCCATGGA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTCCATGGCACTACTGTaGAGAGGCCTCCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDSMALL*RGLRRA
Trigger: TGCCCGCCGGAGGCCTCTTCACAGTAGTGCCATGGA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp TCAGGACGTTTGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATGGTTCCGGAGAACATaGATCGCATCGTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: SGRLLVLLRGQPGFPYSIWFRRT*IASSSL
Trigger: AAGACTGGACGATGCGATTCATGTTCTCCGGAACCA...TATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCAAACGTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp TTCCAAAAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCTGTGGGAGGGTCCCATaGTCCCATGCATGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: FQKKFRHKCIAPQCGRIACGRVP*SHACPH
Trigger: ATGGGGACATGCATGGGATCATGGGACCCTCCCACA...GGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTTTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR TCA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTTGTGGGAGGGTCCCATaGTCCCATGCATGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSCGRVP*SHACPH
Trigger: ATGGGGACATGCATGGGATCATGGGACCCTCCCACA...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTACACATCTGTCCCATGTaGTTCGCTGCGTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLHICPM*FAASPI
Trigger: GATGGGAGACGCAGCGAATCACATGGGACAGATGTG...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGCTACATTTGAGCCAGTaGAATGTCCACTCGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQLHLSQ*NVHSPK
Trigger: CTTTGGCGAGTGGACATTTCACTGGCTCAAATGTAG...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
CDS-3UTR TCA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCTACATTTGAGCCAGTaGAATGTCCACTCGCCAAAG +
Preference number: 4 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYLHLSQ*NVHSPK
Trigger: CTTTGGCGAGTGGACATTTCACTGGCTCAAATGTAG...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
CDS-3UTR TCA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGCTACATTTGAGCCAGTaGAATGTCCACTCGCCAAAG +
Preference number: 4 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVLHLSQ*NVHSPK
Trigger: CTTTGGCGAGTGGACATTTCACTGGCTCAAATGTAG...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
CDS-3UTR TCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGTCGGCAGTGCTGGCTaGAGGAGCGTAGACCTGGTG +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDVGSAG*RSVDLV
Trigger: CACCAGGTCTACGCTCCTTCAGCCAGCACTGCCGAC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000202610.4
ENSMUST00000202772.4
CDS-3UTR TCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGTCGGCAGTGCTGGCTaGAGGAGCGTAGACCTCTGC +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDVGSAG*RSVDLC
Trigger: GCAGAGGTCTACGCTCCTTCAGCCAGCACTGCCGAC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202474.4
CDS-3UTR GCA 90 bp CATCGTTCAGGGAGGAGGGGAAGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGAGGGAAAGTGCTGGCTaGTGGCTTGGAGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: HRSGRRGSYCLSSLPFLERESAG*WLGGRI
Trigger: TATCCTTCCTCCAAGCCAGCAGCCAGCACTTTCCCT...CTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTCCCCTCCTCCCTGAACGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp CTCGCCCGGGCAATGCTGCATGTAATTCCTACACATGATGTGACTTTTAAGTCCAGCTCCAAGGGTCGCTaGTGTGATGGCCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: LARAMLHVIPTHDVTFKSSSKGR*CDGHLA
Trigger: TGCAAGATGGCCATCACAGCAGCGACCCTTGGAGCT...GGACTTAAAAGTCACATCATGTGTAGGAATTACATGCAGCATTGCCCGGGCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAGCTCCAAGGGTCGCTaGTGTGATGGCCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLSSKGR*CDGHLA
Trigger: TGCAAGATGGCCATCACAGCAGCGACCCTTGGAGCT...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGTGCTGTAATGGTTTGTaGCACTACGATGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQCCNGL*HYDGTW
Trigger: CCACGTTCCATCGTAGTGGCACAAACCATTACAGCA...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCATGCTGTAATGGTTTGTaGCACTACGATGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSCCNGL*HYDGTW
Trigger: CCACGTTCCATCGTAGTGGCACAAACCATTACAGCA...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATGTGTGCAGGAAGAGGTaGTGTAATGGTTTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDVCRKR*CNGLCH
Trigger: GTGGCACAAACCATTACAGCACCTCTTCCTGCACAC...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp AGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGCACCTTTGTGCCACCGCATCACGTTGGCAGGGGGTGTaGAGGAAGAGGTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: SYCLSSLPFLEHLCATASRWQGV*RKRCCN
Trigger: ATTACAGCACCTCTTCCTGCACACCCCCTGCCAACG...TGATGCGGTGGCACAAAGGTGCTCCAAGAAGGGCAAAGAAGAAAGACAGTAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTACGTTGGCAGGGGGTGTaGAGGAAGAGGTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLRWQGV*RKRCCN
Trigger: ATTACAGCACCTCTTCCTGCACACCCCCTGCCAACG...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCCCCAGTTCCTCTGTTTaGCATTATACTGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFPSSSV*HYTVCS
Trigger: GGAACAGACAGTATAATGGCAAACAGAGGAACTGGG...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCCCCAGTTCCTCTGTTTaGCATTATACTGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRPSSSV*HYTVCS
Trigger: GGAACAGACAGTATAATGGCAAACAGAGGAACTGGG...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGCTGCGAGCTGCCTGCTaGCCCAGTTCCTCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLLRAAC*PSSSVC
Trigger: GCAAACAGAGGAACTGGGGCAGCAGGCAGCTCGCAG...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp AGAGTTGGCACTACAGGTTACGATAACAAACCGGGGGAAGGGACAAAAATCAGAAGTCTGCGAGCTGCCTaGTGCCCCAGTTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: RVGTTGYDNKPGEGTKIRSLRAA*CPSSSV
Trigger: AACAGAGGAACTGGGGCAGCAGGCAGCTCGCAGACT...TCTGATTTTTGTCCCTTCCCCCGGTTTGTTATCGTAACCTGTAGTGCCAACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp AACAAACATAACCAAAGCAAAGTCAAGAGGAGGCCCTCAGGCCTTGGTGCCCCATCTTCGATTCGGCTTTaGAGTGAGTGCAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: NKHNQSKVKRRPSGLGAPSSIRL*SECKGP
Trigger: AGGACCCTTGCACTCACTGCAAAGCCGAATCGAAGA...TGGGGCACCAAGGCCTGAGGGCCTCCTCTTGACTTTGCTTTGGTTATGTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTTCTTCGATTCGGCTTTaGAGTGAGTGCAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSSSIRL*SECKGP
Trigger: AGGACCCTTGCACTCACTGCAAAGCCGAATCGAAGA...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGTGTGGACGGGCCCACTaGGTGGTTCCGGAGAACATG +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLCGRAH*VVPENM
Trigger: CATGTTCTCCGGAACCACGCAGTGGGCCCGTCCACA...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTGCAGGAGAGAATGGCTaGCTCTCAGAGCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSAGENG*LSEPRH
Trigger: ATGGCGTGGCTCTGAGAGGCAGCCATTCTCTCCTGC...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGGAAGATTTTGTGTCTTaGAGGTTCTCATCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQEDFVS*RFSSPS
Trigger: CGAGGGCGATGAGAACCTGCAAGACACAAAATCTTC...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCAGAAGATTTTGTGTCTTaGAGGTTCTCATCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFAEDFVS*RFSSPS
Trigger: CGAGGGCGATGAGAACCTGCAAGACACAAAATCTTC...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCCTCTTCAGGTGGAGCTaGACCATACGGCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLLFRWS*TIRPSS
Trigger: GGAGCTTGGCCGTATGGTGCAGCTCCACCTGAAGAG...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTCTTTCTCGAACTTGCTaGTCCAGGCTGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSLSRTC*SRLRMT
Trigger: TGTCATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAG...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTTCCCATGTGATTCGCTaGGTCTCCCATCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSSHVIR*VSHPRV
Trigger: CACCCTGGGATGGGAGACGCAGCGAATCACATGGGA...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CTTCTTTTCAGACAGGCAGCTTTCGGGTTCAGATTCCTTTCTCGAACTTGCTGCAGTACATCAAAGAGTTaGCGCCCATGCCCGGGATGG +
Preference number: 4 (lower is better)
Translates to: LLFRQAAFGFRFLSRTCCSTSKS*RPCPGW
Trigger: CCATCCCGGGCATGGGCGGCAACTCTTTGATGTACT...GCAGCAAGTTCGAGAAAGGAATCTGAACCCGAAAGCTGCCTGTCTGAAAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCTGGACGGGCTTGGATaGCCTCCAGTTCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLLDGLG*PPVPQD
Trigger: GTCCTGGGGAACTGGAGGCCATCCAAGCCCGTCCAG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTGGACGGGCTTGGATaGCCTCCAGTTCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDLDGLG*PPVPQD
Trigger: GTCCTGGGGAACTGGAGGCCATCCAAGCCCGTCCAG...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR CCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGGTTCCTGGACGGGCTTaGATGGCCTCCAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLVPGRA*MASSSP
Trigger: TGGGGAACTGGAGGCCATCCAAGCCCGTCCAGGAAC...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
CDS-3UTR CCA 90 bp AGAGTTGGCACTACAGGTTACGATAACAAACCGGGGGAAGGGACAAAAATCAGAGGGAGCCAGGTTTGGTaGGCGAAAGGGTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: RVGTTGYDNKPGEGTKIRGSQVW*AKGFLD
Trigger: ATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCC...TCTGATTTTTGTCCCTTCCCCCGGTTTGTTATCGTAACCTGTAGTGCCAACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTTTGTCTGTACCTCCATaGCACTACTGTGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSLSVPP*HYCEEA
Trigger: GGCCTCTTCACAGTAGTGCCATGGAGGTACAGACAA...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GAAGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGCACCTTTGTGCCACCGCATTGTAGTCGGCAGTGCTaGCTGAAGGAGCGTAGACTG +
Preference number: 4 (lower is better)
Translates to: EVTVFLLCPSWSTFVPPHCSRQC*LKERRL
Trigger: CAGTCTACGCTCCTTCAGCCAGCACTGCCGACTACA...ATGCGGTGGCACAAAGGTGCTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAGGAGGAAGGATAGCCTaGCGAGTCCCTGTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLGGRIA*RVPVVV
Trigger: GACTACAACAGGGACTCGCCAGGCTATCCTTCCTCC...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CTTCTTTTCAGACAGGCAGCTTTCGGGTTCAGATTCCTTTCTCGAACTTGCTGCGGAGGAAGGATAGCCTaGCGAGTCCCTGTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: LLFRQAAFGFRFLSRTCCGGRIA*RVPVVV
Trigger: GACTACAACAGGGACTCGCCAGGCTATCCTTCCTCC...GCAGCAAGTTCGAGAAAGGAATCTGAACCCGAAAGCTGCCTGTCTGAAAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR CCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGTGCTGGCTGCTGGCTTaGAGGAAGGATAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLCWLLA*RKDSLA
Trigger: CGCCAGGCTATCCTTCCTCCAAGCCAGCAGCCAGCA...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CTCGCCCGGGCAATGCTGCATGTAATTCCTACACATGATGTGACTTTTAAGTCCGAAAGTGCTGGCTGCTaGCTTGGAGGAAGGATAGCC +
Preference number: 4 (lower is better)
Translates to: LARAMLHVIPTHDVTFKSESAGC*LGGRIA
Trigger: GGCTATCCTTCCTCCAAGCCAGCAGCCAGCACTTTC...GGACTTAAAAGTCACATCATGTGTAGGAATTACATGCAGCATTGCCCGGGCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGGTAGCTGCTGGACTGTaGGATATGAGAAGAATTGCC +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQVAAGL*DMRRIA
Trigger: GGCAATTCTTCTCATATCCCACAGTCCAGCAGCTAC...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATCCGGTAATTCACTACGATGGAACGTaGACATCGGAGGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: CWFCYEGSRASPIQYPVIHYDGT*TSEEDW
Trigger: CCAGTCTTCCTCCGATGTCCACGTTCCATCGTAGTG...AATTACCGGATATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATTTTGTGCCACTACGATaGAACGTGGACATCGGAGGA +
Preference number: 4 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDFVPLR*NVDIGG
Trigger: TCCTCCGATGTCCACGTTCCATCGTAGTGGCACAAA...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTTTTGTGCCACTACGATaGAACGTGGACATCGGAGGA +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSFVPLR*NVDIGG
Trigger: TCCTCCGATGTCCACGTTCCATCGTAGTGGCACAAA...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTAGGGTCCTTCATAATTaGGAGATGACGAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSRVLHN*EMTRPV
Trigger: GACAGGCCTCGTCATCTCCCAATTATGAAGGACCCT...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TTGGAATCAGTTGGACCACTGGGTGGGCTGAAAGCTGTCAAAGCATTAGTGTTCTTTGGCAGGAGAGAATaGCTGCCTCTCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: LESVGPLGGLKAVKALVFFGRRE*LPLRAT
Trigger: CGTGGCTCTGAGAGGCAGCCATTCTCTCCTGCCAAA...GAACACTAATGCTTTGACAGCTTTCAGCCCACCCAGTGGTCCAACTGATTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCGACCGGAACCTGGTTTaGCAGGAGAGAATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLDRNLV*QERMAA
Trigger: GGCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTC...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGCTGGACCGGAAGTTGTaGGACCGGAACCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQLDRKL*DRNLVW
Trigger: CCAAACCAGGTTCCGGTCCCACAACTTCCGGTCCAG...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCCTGGACCGGAAGTTGTaGGACCGGAACCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLLDRKL*DRNLVW
Trigger: CCAAACCAGGTTCCGGTCCCACAACTTCCGGTCCAG...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTCTGGACCGGAAGTTGTaGGACCGGAACCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSLDRKL*DRNLVW
Trigger: CCAAACCAGGTTCCGGTCCCACAACTTCCGGTCCAG...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CATCGTTCAGGGAGGAGGGGAAGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGGTAAGGGTCTTGGGGTaGGTTCAAGTCAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: HRSGRRGSYCLSSLPFLEVRVLG*VQVRGS
Trigger: ACTTCCCCTGACTTGAACCCACCCCAAGACCCTTAC...CTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTCCCCTCCTCCCTGAACGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGCCCTGGAGGCCTGGTaGCATCCCTCTGTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDALEAW*HPSVRV
Trigger: GACCCTTACAGAGGGATGCCACCAGGCCTCCAGGGC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGCCCTGGAGGCCTGGTaGCATCCCTCTGTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLALEAW*HPSVRV
Trigger: GACCCTTACAGAGGGATGCCACCAGGCCTCCAGGGC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCTGGCCCTGGAGGCCTaGTGGCATCCCTCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLLALEA*WHPSVR
Trigger: CCTTACAGAGGGATGCCACCAGGCCTCCAGGGCCAG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTGGCCCTGGAGGCCTaGTGGCATCCCTCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDLALEA*WHPSVR
Trigger: CCTTACAGAGGGATGCCACCAGGCCTCCAGGGCCAG...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ATGTATTCAGAAACGTCTCGGTCACTGCACACTACTTCGGCTACACAGGTAGGTATGACAGCCACGGCCTaGTGGAGAATCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: MYSETSRSLHTTSATQVGMTATA*WRIRSL
Trigger: CAAGCTCCTGATTCTCCACCAGGCCGTGGCTGTCAT...ACCTACCTGTGTAGCCGAAGTAGTGTGCAGTGACCGAGACGTTTCTGAATACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTCCCATCCCAGGGTGTaGGCCAGCCAAGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDSHPRV*ASQGEW
Trigger: CCACTCTCCTTGGCTGGCCCACACCCTGGGATGGGA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTCCCATCCCAGGGTGTaGGCCAGCCAAGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLSHPRV*ASQGEW
Trigger: CCACTCTCCTTGGCTGGCCCACACCCTGGGATGGGA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
3UTR CAA 72 bp GTCATCACTTCGTTGCCATCAGGACGTTTGCTGGTTTaGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATA +
Preference number: 4 (lower is better)
Translates to: VITSLPSGRLLV*LRGQPGFPYSI
Trigger: TATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCAAACGTCCTGATGGCAACGAAGTGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR CAA 72 bp ATAACCAAAGCAAAGTCAAGAGGAGGCCCTCAGGCCTaGGTGCCCCATTGTCTTGGAATCCAGCACATTCCA +
Preference number: 4 (lower is better)
Translates to: ITKAKSRGGPQA*VPHCLGIQHIP
Trigger: TGGAATGTGCTGGATTCCAAGACAATGGGGCACCAAGGCCTGAGGGCCTCCTCTTGACTTTGCTTTGGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp TCACAGGTTCCCAGAATGCTTGGGTTTCAGCTGGATTCTCCTAGCCTCACTTTTAGTTCCCCAGGACCCTaGGCTACTTCTGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: SQVPRMLGFQLDSPSLTFSSPGP*ATSVFY
Trigger: GTAGAAGACAGAAGTAGCTCAGGGTCCTGGGGAACT...AAAAGTGAGGCTAGGAGAATCCAGCTGAAACCCAAGCATTCTGGGAACCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR TCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTAGAGAGATTGTCATGTaGCCCAAGATCCCTGCTAGT +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSREIVM*PKIPAS
Trigger: ACTAGCAGGGATCTTGGGTCACATGACAATCTCTCT...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp GAAGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGCACCTTTGTGCCACCGCATGGAGCCCACAGGAGTTaGAGGATTGGAGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: EVTVFLLCPSWSTFVPPHGAHRS*RIGGKA
Trigger: AGCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCC...ATGCGGTGGCACAAAGGTGCTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTTTCATAATTGGGAGATaGCGAGGCCTGTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSFIIGR*RGLSSI
Trigger: AATGGAGGACAGGCCTCGTCATCTCCCAATTATGAA...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGTGTGGGAGGGTCCCATaGTCCCATGCATGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLCGRVP*SHACPH
Trigger: ATGGGGACATGCATGGGATCATGGGACCCTCCCACA...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTCCGGCGGGCATTATTaGTTGAATACTGATAGTACT +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRSGGHY*LNTDST
Trigger: AGTACTATCAGTATTCAAGCAATAATGCCCGCCGGA...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTATGTTGTAGTCGGCAGTaGTGGCTGAAGGAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLCCSRQ*WLKERR
Trigger: TCTACGCTCCTTCAGCCAGCACTGCCGACTACAACA...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CTCGCCCGGGCAATGCTGCATGTAATTCCTACACATGATGTGACTTTTAAGTCCAGGGAAAGTGCTGGCTaGTGGCTTGGAGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: LARAMLHVIPTHDVTFKSRESAG*WLGGRI
Trigger: TATCCTTCCTCCAAGCCAGCAGCCAGCACTTTCCCT...GGACTTAAAAGTCACATCATGTGTAGGAATTACATGCAGCATTGCCCGGGCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGAGCTCCAAGGGTCGCTaGTGTGATGGCCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQSSKGR*CDGHLA
Trigger: TGCAAGATGGCCATCACAGCAGCGACCCTTGGAGCT...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GAAGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGCACCTTTGTGCCACCGCATGCAGGCTACAGTAGCTaGTGGACTGTGGGATATGAG +
Preference number: 4 (lower is better)
Translates to: EVTVFLLCPSWSTFVPPHAGYSS*WTVGYE
Trigger: CTCATATCCCACAGTCCAGCAGCTACTGTAGCCTGC...ATGCGGTGGCACAAAGGTGCTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAGCAGGCTACAGTAGCTaGTGGACTGTGGGATATGAG +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLAGYSS*WTVGYE
Trigger: CTCATATCCCACAGTCCAGCAGCTACTGTAGCCTGC...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CTTCTTTTCAGACAGGCAGCTTTCGGGTTCAGATTCCTTTCTCGAACTTGCTGCGCAGGCTACAGTAGCTaGTGGACTGTGGGATATGAG +
Preference number: 4 (lower is better)
Translates to: LLFRQAAFGFRFLSRTCCAGYSS*WTVGYE
Trigger: CTCATATCCCACAGTCCAGCAGCTACTGTAGCCTGC...GCAGCAAGTTCGAGAAAGGAATCTGAACCCGAAAGCTGCCTGTCTGAAAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR GCA 90 bp TTCCAAAAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCCGTTGGCAGGGGGTGTaGAGGAAGAGGTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: FQKKFRHKCIAPQCGRIARWQGV*RKRCCN
Trigger: ATTACAGCACCTCTTCCTGCACACCCCCTGCCAACG...GGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTTTTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR GCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCCGTTGGCAGGGGGTGTaGAGGAAGAGGTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLRWQGV*RKRCCN
Trigger: ATTACAGCACCTCTTCCTGCACACCCCCTGCCAACG...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGCCCAGTTCCTCTGTTTaGCATTATACTGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQPSSSV*HYTVCS
Trigger: GGAACAGACAGTATAATGGCAAACAGAGGAACTGGG...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCTGCGAGCTGCCTGCTaGCCCAGTTCCTCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLLRAAC*PSSSVC
Trigger: GCAAACAGAGGAACTGGGGCAGCAGGCAGCTCGCAG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTGCGAGCTGCCTGCTaGCCCAGTTCCTCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDLRAAC*PSSSVC
Trigger: GCAAACAGAGGAACTGGGGCAGCAGGCAGCTCGCAG...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGAGTCTGCGAGCTGCCTaGTGCCCCAGTTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLSLRAA*CPSSSV
Trigger: AACAGAGGAACTGGGGCAGCAGGCAGCTCGCAGACT...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTGTGGACGGGCCCACTaGGTGGTTCCGGAGAACATG +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDCGRAH*VVPENM
Trigger: CATGTTCTCCGGAACCACGCAGTGGGCCCGTCCACA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTGTGGACGGGCCCACTaGGTGGTTCCGGAGAACATG +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLCGRAH*VVPENM
Trigger: CATGTTCTCCGGAACCACGCAGTGGGCCCGTCCACA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp GTAGGAGTCCTATGTGTTCACTGCACTACACACCAAAGTCCATTGTTGGAAAGAGCAGGAGAGAATGGCTaGCTCTCAGAGCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: VGVLCVHCTTHQSPLLERAGENG*LSEPRH
Trigger: ATGGCGTGGCTCTGAGAGGCAGCCATTCTCTCCTGC...TCTTTCCAACAATGGACTTTGGTGTGTAGTGCAGTGAACACATAGGACTCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp TTGGAATCAGTTGGACCACTGGGTGGGCTGAAAGCTGTCAAAGCATTAGTGTTCCAAGTCAGGGGAAGTTaGAGACTGGACCGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LESVGPLGGLKAVKALVFQVRGS*RLDRKL
Trigger: CAACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTG...GAACACTAATGCTTTGACAGCTTTCAGCCCACCCAGTGGTCCAACTGATTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp ATGTATTCAGAAACGTCTCGGTCACTGCACACTACTTCGGCTACACAGGTAGGTCAAGTCAGGGGAAGTTaGAGACTGGACCGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: MYSETSRSLHTTSATQVGQVRGS*RLDRKL
Trigger: CAACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTG...ACCTACCTGTGTAGCCGAAGTAGTGTGCAGTGACCGAGACGTTTCTGAATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGAAGATTTTGTGTCTTaGAGGTTCTCATCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSEDFVS*RFSSPS
Trigger: CGAGGGCGATGAGAACCTGCAAGACACAAAATCTTC...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTCGCGCTCAGCCTTCTaGTCTGGGGTCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDSRSAF*SGVRSS
Trigger: TGAGGACCTGACCCCAGAGCAGAAGGCTGAGCGCGA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTCGCGCTCAGCCTTCTaGTCTGGGGTCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLSRSAF*SGVRSS
Trigger: TGAGGACCTGACCCCAGAGCAGAAGGCTGAGCGCGA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp GTAGGAGTCCTATGTGTTCACTGCACTACACACCAAAGTCCATTGTTGGAAAGACTCTTCAGGTGGAGCTaGACCATACGGCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: VGVLCVHCTTHQSPLLERLFRWS*TIRPSS
Trigger: GGAGCTTGGCCGTATGGTGCAGCTCCACCTGAAGAG...TCTTTCCAACAATGGACTTTGGTGTGTAGTGCAGTGAACACATAGGACTCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGTCCCATGTGATTCGCTaGGTCTCCCATCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLSHVIR*VSHPRV
Trigger: CACCCTGGGATGGGAGACGCAGCGAATCACATGGGA...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGTTCCTGGACGGGCTTaGATGGCCTCCAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDVPGRA*MASSSP
Trigger: TGGGGAACTGGAGGCCATCCAAGCCCGTCCAGGAAC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGTTCCTGGACGGGCTTaGATGGCCTCCAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLVPGRA*MASSSP
Trigger: TGGGGAACTGGAGGCCATCCAAGCCCGTCCAGGAAC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR CCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAGGGCGAAAGGGTTCCTaGATTGCCCATATCCATGTC +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLGRKGS*IAHIHV
Trigger: GACATGGATATGGGCAATCCAGGAACCCTTTCGCCC...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGCCTCACTTTTGCAAACAGTGACCACCTTTGCAGCTCTTATTCATCAACCTCTGGGAGCCAGGTTTGGTaGGCGAAAGGGTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: SLTFANSDHLCSSYSSTSGSQVW*AKGFLD
Trigger: ATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCC...AGAGGTTGATGAATAAGAGCTGCAAAGGTGGTCACTGTTTGCAAAAGTGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR CCA 90 bp TTTTGTTCAACGGTCAGTACCTCCAACACTCAGAATACAGGAAGAGTGGCTTTGACTGGGAGCCAGGTTTaGTGGGCGAAAGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: FCSTVSTSNTQNTGRVALTGSQV*WAKGFL
Trigger: CAGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGT...CAAAGCCACTCTTCCTGTATTCTGAGTGTTGGAGGTACTGACCGTTGAACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGACTGGGAGCCAGGTTTaGTGGGCGAAAGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLTGSQV*WAKGFL
Trigger: CAGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGT...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGAGTTGGCACTACAGGTTACGATAACAAACCGGGGGAAGGGACAAAAATCAGATGTAGTCGGCAGTGCTaGCTGAAGGAGCGTAGACTG +
Preference number: 4 (lower is better)
Translates to: RVGTTGYDNKPGEGTKIRCSRQC*LKERRL
Trigger: CAGTCTACGCTCCTTCAGCCAGCACTGCCGACTACA...TCTGATTTTTGTCCCTTCCCCCGGTTTGTTATCGTAACCTGTAGTGCCAACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTGTAGTCGGCAGTGCTaGCTGAAGGAGCGTAGACTG +
Preference number: 4 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQCSRQC*LKERRL
Trigger: CAGTCTACGCTCCTTCAGCCAGCACTGCCGACTACA...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCTGTAGTCGGCAGTGCTaGCTGAAGGAGCGTAGACTG +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLCSRQC*LKERRL
Trigger: CAGTCTACGCTCCTTCAGCCAGCACTGCCGACTACA...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TTCCAAAAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCTGTAGTCGGCAGTGCTaGCTGAAGGAGCGTAGACTG +
Preference number: 4 (lower is better)
Translates to: FQKKFRHKCIAPQCGRIACSRQC*LKERRL
Trigger: CAGTCTACGCTCCTTCAGCCAGCACTGCCGACTACA...GGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTTTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR CCA 90 bp TTCCAAAAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCGGAGGAAGGATAGCCTaGCGAGTCCCTGTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: FQKKFRHKCIAPQCGRIAGGRIA*RVPVVV
Trigger: GACTACAACAGGGACTCGCCAGGCTATCCTTCCTCC...GGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTTTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR CCA 90 bp TTTCCAAACGGTCTTCGATTCGGCTTTGCAGTGAGTGCAAGGGTCCTTCATAATGGAGGAAGGATAGCCTaGCGAGTCCCTGTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: FPNGLRFGFAVSARVLHNGGRIA*RVPVVV
Trigger: GACTACAACAGGGACTCGCCAGGCTATCCTTCCTCC...ATTATGAAGGACCCTTGCACTCACTGCAAAGCCGAATCGAAGACCGTTTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTGCTGGCTGCTGGCTTaGAGGAAGGATAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDCWLLA*RKDSLA
Trigger: CGCCAGGCTATCCTTCCTCCAAGCCAGCAGCCAGCA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTGCTGGCTGCTGGCTTaGAGGAAGGATAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLCWLLA*RKDSLA
Trigger: CGCCAGGCTATCCTTCCTCCAAGCCAGCAGCCAGCA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTGAAAGTGCTGGCTGCTaGCTTGGAGGAAGGATAGCC +
Preference number: 4 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSESAGC*LGGRIA
Trigger: GGCTATCCTTCCTCCAAGCCAGCAGCCAGCACTTTC...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGGAAAGTGCTGGCTGCTaGCTTGGAGGAAGGATAGCC +
Preference number: 4 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQESAGC*LGGRIA
Trigger: GGCTATCCTTCCTCCAAGCCAGCAGCCAGCACTTTC...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCGAAAGTGCTGGCTGCTaGCTTGGAGGAAGGATAGCC +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLESAGC*LGGRIA
Trigger: GGCTATCCTTCCTCCAAGCCAGCAGCCAGCACTTTC...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGCTGATTCATCCCGCTaGAGGAGCTCCAAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDADSSR*RSSKGR
Trigger: GCGACCCTTGGAGCTCCTCCAGCGGGATGAATCAGC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGCTGATTCATCCCGCTaGAGGAGCTCCAAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLADSSR*RSSKGR
Trigger: GCGACCCTTGGAGCTCCTCCAGCGGGATGAATCAGC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATGTAGCTGCTGGACTGTaGGATATGAGAAGAATTGCC +
Preference number: 4 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDVAAGL*DMRRIA
Trigger: GGCAATTCTTCTCATATCCCACAGTCCAGCAGCTAC...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATCCGGTAATTGGCTACAGTAGCTGCTaGACTGTGGGATATGAGAAG +
Preference number: 4 (lower is better)
Translates to: CWFCYEGSRASPIQYPVIGYSSC*TVGYEK
Trigger: CTTCTCATATCCCACAGTCCAGCAGCTACTGTAGCC...AATTACCGGATATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp TCAGGACGTTTGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATAGCTCAAACGTTCATGTaGATGCAGGCTACAGTAGCT +
Preference number: 4 (lower is better)
Translates to: SGRLLVLLRGQPGFPYSIAQTFM*MQATVA
Trigger: AGCTACTGTAGCCTGCATCCACATGAACGTTTGAGC...TATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCAAACGTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp TGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATCCGGTAATTAGGGTCCTTCATAATTaGGAGATGACGAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: CWFCYEGSRASPIQYPVIRVLHN*EMTRPV
Trigger: GACAGGCCTCGTCATCTCCCAATTATGAAGGACCCT...AATTACCGGATATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCACCAGGCACAGCTGTaGACGGGCCCACTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLHQAQL*TGPLRG
Trigger: ACCACGCAGTGGGCCCGTCCACAGCTGTGCCTGGTG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACACACCAGGCACAGCTGTaGACGGGCCCACTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITHQAQL*TGPLRG
Trigger: ACCACGCAGTGGGCCCGTCCACAGCTGTGCCTGGTG...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCTTTGGCAGGAGAGAATaGCTGCCTCTCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLFGRRE*LPLRAT
Trigger: CGTGGCTCTGAGAGGCAGCCATTCTCTCCTGCCAAA...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TTTTGTTCAACGGTCAGTACCTCCAACACTCAGAATACAGGAAGAGTGGCTTTGGACCGGAACCTGGTTTaGCAGGAGAGAATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: FCSTVSTSNTQNTGRVALDRNLV*QERMAA
Trigger: GGCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTC...CAAAGCCACTCTTCCTGTATTCTGAGTGTTGGAGGTACTGACCGTTGAACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGCTGGACCGGAAGTTGTaGGACCGGAACCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLLDRKL*DRNLVW
Trigger: CCAAACCAGGTTCCGGTCCCACAACTTCCGGTCCAG...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAGTAAGGGTCTTGGGGTaGGTTCAAGTCAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLVRVLG*VQVRGS
Trigger: ACTTCCCCTGACTTGAACCCACCCCAAGACCCTTAC...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp ATGTATTCAGAAACGTCTCGGTCACTGCACACTACTTCGGCTACACAGGTAGGTGTAAGGGTCTTGGGGTaGGTTCAAGTCAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: MYSETSRSLHTTSATQVGVRVLG*VQVRGS
Trigger: ACTTCCCCTGACTTGAACCCACCCCAAGACCCTTAC...ACCTACCTGTGTAGCCGAAGTAGTGTGCAGTGACCGAGACGTTTCTGAATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACACGCTCTGGCCCTaGAGGCCTGGTGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLDTLWP*RPGGIP
Trigger: AGGGATGCCACCAGGCCTCCAGGGCCAGAGCGTGTC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAGACACGCTCTGGCCCTaGAGGCCTGGTGGCATCCCT +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITDTLWP*RPGGIP
Trigger: AGGGATGCCACCAGGCCTCCAGGGCCAGAGCGTGTC...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCCAGAAGACACGCTCTaGCCCTGGAGGCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLPEDTL*PWRPGG
Trigger: GCCACCAGGCCTCCAGGGCCAGAGCGTGTCTTCTGG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACACCAGAAGACACGCTCTaGCCCTGGAGGCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITPEDTL*PWRPGG
Trigger: GCCACCAGGCCTCCAGGGCCAGAGCGTGTCTTCTGG...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCATCAGGAGCTTGGTCTaGGGCTTGTCGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLIRSLV*GLSLFR
Trigger: CCTGAAGAGCGACAAGCCCCAGACCAAGCTCCTGAT...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TTCCAAAAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATGACAGCCACGGCCTaGTGGAGAATCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: FQKKFRHKCIAPQCGRIAMTATA*WRIRSL
Trigger: CAAGCTCCTGATTCTCCACCAGGCCGTGGCTGTCAT...GGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTTTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR CCA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGATGACAGCCACGGCCTaGTGGAGAATCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQMTATA*WRIRSL
Trigger: CAAGCTCCTGATTCTCCACCAGGCCGTGGCTGTCAT...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
3UTR CAA 72 bp TTACTGTCTTTCTTCTTTGCCCTTCTTGGAGCACCTTaGTGCCACCGCATCACAGCAAAGTCCCCGAAGAAC +
Preference number: 4 (lower is better)
Translates to: LLSFFFALLGAP*CHRITAKSPKN
Trigger: GTTCTTCGGGGACTTTGCTGTGATGCGGTGGCACAAAGGTGCTCCAAGAAGGGCAAAGAAGAAAGACAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR CAA 72 bp GCTCTCCAAAGCCCTGGACAGGTAAATCTCTGCAACTaGAGGCACCCTTTTCAAGGCTCTCTTCAGAGCTTA +
Preference number: 4 (lower is better)
Translates to: ALQSPGQVNLCN*RHPFQGSLQSL
Trigger: TAAGCTCTGAAGAGAGCCTTGAAAAGGGTGCCTCAAGTTGCAGAGATTTACCTGTCCAGGGCTTTGGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR TCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGGCGAAAACATCGCACTaGAATCCAGTAAATCACTCA +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQAKTSH*NPVNHS
Trigger: TGAGTGATTTACTGGATTTCAGTGCGATGTTTTCGC...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202116.4
CDS-3UTR TCA 90 bp GTACCTCTGAAAATCCCAGGGGAGGGTAACAAGGGCAGCGCCACAAGCCAGACATTTGTATTCTGGAATTaGCAAAAGGTGGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: VPLKIPGEGNKGSATSQTFVFWN*QKVERD
Trigger: ATCTCTCTCCACCTTTTGTCAATTCCAGAATACAAA...TGTCTGGCTTGTGGCGCTGCCCTTGTTACCCTCCCCTGGGATTTTCAGAGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACATCCATGGCACTACTGTaGAGAGGCCTCCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITSMALL*RGLRRA
Trigger: TGCCCGCCGGAGGCCTCTTCACAGTAGTGCCATGGA...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTCCATGGCACTACTGTaGAGAGGCCTCCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLSMALL*RGLRRA
Trigger: TGCCCGCCGGAGGCCTCTTCACAGTAGTGCCATGGA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp CTCGCCCGGGCAATGCTGCATGTAATTCCTACACATGATGTGACTTTTAAGTCCCTGGACTGTGGGATATaGGAAGAATTGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: LARAMLHVIPTHDVTFKSLDCGI*EELPSI
Trigger: GATGCTGGGCAATTCTTCTCATATCCCACAGTCCAG...GGACTTAAAAGTCACATCATGTGTAGGAATTACATGCAGCATTGCCCGGGCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTACTGGACTGTGGGATATaGGAAGAATTGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLLDCGI*EELPSI
Trigger: GATGCTGGGCAATTCTTCTCATATCCCACAGTCCAG...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTGTGGGAGGGTCCCATaGTCCCATGCATGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLCGRVP*SHACPH
Trigger: ATGGGGACATGCATGGGATCATGGGACCCTCCCACA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTGTGGGAGGGTCCCATaGTCCCATGCATGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDCGRVP*SHACPH
Trigger: ATGGGGACATGCATGGGATCATGGGACCCTCCCACA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGCACATCTGTCCCATGTaGTTCGCTGCGTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLHICPM*FAASPI
Trigger: GATGGGAGACGCAGCGAATCACATGGGACAGATGTG...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGTCTGTCTTCTACATTTaGGCCAGTGAAATGTCCACT +
Preference number: 4 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQSVFYI*ASEMST
Trigger: AGTGGACATTTCACTGGCTCAAATGTAGAAGACAGA...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
CDS-3UTR TCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGTCGGCAGTGCTGGCTaGAGGAGCGTAGACCTGGTG +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLVGSAG*RSVDLV
Trigger: CACCAGGTCTACGCTCCTTCAGCCAGCACTGCCGAC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000202610.4
ENSMUST00000202772.4
CDS-3UTR GCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCATCCGGCGGGCATTATTaGTTGAATACTGATAGTACT +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFASGGHY*LNTDST
Trigger: AGTACTATCAGTATTCAAGCAATAATGCCCGCCGGA...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGTCCGGCGGGCATTATTaGTTGAATACTGATAGTACT +
Preference number: 4 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVSGGHY*LNTDST
Trigger: AGTACTATCAGTATTCAAGCAATAATGCCCGCCGGA...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCTGTTGTAGTCGGCAGTaGTGGCTGAAGGAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLCCSRQ*WLKERR
Trigger: TCTACGCTCCTTCAGCCAGCACTGCCGACTACAACA...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TTTCCAAACGGTCTTCGATTCGGCTTTGCAGTGAGTGCAAGGGTCCTTCATAATTGTTGTAGTCGGCAGTaGTGGCTGAAGGAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: FPNGLRFGFAVSARVLHNCCSRQ*WLKERR
Trigger: TCTACGCTCCTTCAGCCAGCACTGCCGACTACAACA...ATTATGAAGGACCCTTGCACTCACTGCAAAGCCGAATCGAAGACCGTTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
CDS-3UTR GCA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTAGGGAAAGTGCTGGCTaGTGGCTTGGAGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSRESAG*WLGGRI
Trigger: TATCCTTCCTCCAAGCCAGCAGCCAGCACTTTCCCT...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TTTCCAAACGGTCTTCGATTCGGCTTTGCAGTGAGTGCAAGGGTCCTTCATAATAGGGAAAGTGCTGGCTaGTGGCTTGGAGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: FPNGLRFGFAVSARVLHNRESAG*WLGGRI
Trigger: TATCCTTCCTCCAAGCCAGCAGCCAGCACTTTCCCT...ATTATGAAGGACCCTTGCACTCACTGCAAAGCCGAATCGAAGACCGTTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
CDS-3UTR GCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGAGCTCCAAGGGTCGCTaGTGTGATGGCCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLSSKGR*CDGHLA
Trigger: TGCAAGATGGCCATCACAGCAGCGACCCTTGGAGCT...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp AGAGTTGGCACTACAGGTTACGATAACAAACCGGGGGAAGGGACAAAAATCAGAGCAGGCTACAGTAGCTaGTGGACTGTGGGATATGAG +
Preference number: 4 (lower is better)
Translates to: RVGTTGYDNKPGEGTKIRAGYSS*WTVGYE
Trigger: CTCATATCCCACAGTCCAGCAGCTACTGTAGCCTGC...TCTGATTTTTGTCCCTTCCCCCGGTTTGTTATCGTAACCTGTAGTGCCAACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp TTCCAAAAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCGCAGGCTACAGTAGCTaGTGGACTGTGGGATATGAG +
Preference number: 4 (lower is better)
Translates to: FQKKFRHKCIAPQCGRIAAGYSS*WTVGYE
Trigger: CTCATATCCCACAGTCCAGCAGCTACTGTAGCCTGC...GGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTTTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR GCA 90 bp TGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATCCGGTAATTTGCTGTAATGGTTTGTaGCACTACGATGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: CWFCYEGSRASPIQYPVICCNGL*HYDGTW
Trigger: CCACGTTCCATCGTAGTGGCACAAACCATTACAGCA...AATTACCGGATATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp CTCGCCCGGGCAATGCTGCATGTAATTCCTACACATGATGTGACTTTTAAGTCCGTGTGCAGGAAGAGGTaGTGTAATGGTTTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LARAMLHVIPTHDVTFKSVCRKR*CNGLCH
Trigger: GTGGCACAAACCATTACAGCACCTCTTCCTGCACAC...GGACTTAAAAGTCACATCATGTGTAGGAATTACATGCAGCATTGCCCGGGCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTCCCAGTTCCTCTGTTTaGCATTATACTGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSPSSSV*HYTVCS
Trigger: GGAACAGACAGTATAATGGCAAACAGAGGAACTGGG...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACAGTCTGCGAGCTGCCTaGTGCCCCAGTTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDSLRAA*CPSSSV
Trigger: AACAGAGGAACTGGGGCAGCAGGCAGCTCGCAGACT...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTAGTCTGCGAGCTGCCTaGTGCCCCAGTTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLSLRAA*CPSSSV
Trigger: AACAGAGGAACTGGGGCAGCAGGCAGCTCGCAGACT...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTATCTTCGATTCGGCTTTaGAGTGAGTGCAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLSSIRL*SECKGP
Trigger: AGGACCCTTGCACTCACTGCAAAGCCGAATCGAAGA...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGGTCCCATGATCCCATaGATGTCCCCATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLGPMIP*MSPWPP
Trigger: TGGTGGCCATGGGGACATGCATGGGATCATGGGACC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGGTCCCATGATCCCATaGATGTCCCCATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDGPMIP*MSPWPP
Trigger: TGGTGGCCATGGGGACATGCATGGGATCATGGGACC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGCAGGAGAGAATGGCTaGCTCTCAGAGCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLAGENG*LSEPRH
Trigger: ATGGCGTGGCTCTGAGAGGCAGCCATTCTCTCCTGC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGCAGGAGAGAATGGCTaGCTCTCAGAGCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDAGENG*LSEPRH
Trigger: ATGGCGTGGCTCTGAGAGGCAGCCATTCTCTCCTGC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTCAAGTCAGGGGAAGTTaGAGACTGGACCGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSQVRGS*RLDRKL
Trigger: CAACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTG...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCCAAGTCAGGGGAAGTTaGAGACTGGACCGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLQVRGS*RLDRKL
Trigger: CAACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTG...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTCTTCAGGTGGAGCTaGACCATACGGCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDLFRWS*TIRPSS
Trigger: GGAGCTTGGCCGTATGGTGCAGCTCCACCTGAAGAG...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCTCTTCAGGTGGAGCTaGACCATACGGCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLLFRWS*TIRPSS
Trigger: GGAGCTTGGCCGTATGGTGCAGCTCCACCTGAAGAG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp ATGTATTCAGAAACGTCTCGGTCACTGCACACTACTTCGGCTACACAGGTAGGTCTTTCTCGAACTTGCTaGTCCAGGCTGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: MYSETSRSLHTTSATQVGLSRTC*SRLRMT
Trigger: TGTCATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAG...ACCTACCTGTGTAGCCGAAGTAGTGTGCAGTGACCGAGACGTTTCTGAATACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTCCCATGTGATTCGCTaGGTCTCCCATCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDSHVIR*VSHPRV
Trigger: CACCCTGGGATGGGAGACGCAGCGAATCACATGGGA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTCCCATGTGATTCGCTaGGTCTCCCATCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLSHVIR*VSHPRV
Trigger: CACCCTGGGATGGGAGACGCAGCGAATCACATGGGA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GAAACACTAGCTGACGTGAATACCAACAAAAACGTTCATGTCGTTTTCTTCAGACTGGACGGGCTTGGATaGCCTCCAGTTCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: ETLADVNTNKNVHVVFFRLDGLG*PPVPQD
Trigger: GTCCTGGGGAACTGGAGGCCATCCAAGCCCGTCCAG...TCTGAAGAAAACGACATGAACGTTTTTGTTGGTATTCACGTCAGCTAGTGTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCTGGACGGGCTTGGATaGCCTCCAGTTCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLLDGLG*PPVPQD
Trigger: GTCCTGGGGAACTGGAGGCCATCCAAGCCCGTCCAG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR CCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCGGGCGAAAGGGTTCCTaGATTGCCCATATCCATGTC +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLGRKGS*IAHIHV
Trigger: GACATGGATATGGGCAATCCAGGAACCCTTTCGCCC...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTGGGCGAAAGGGTTCCTaGATTGCCCATATCCATGTC +
Preference number: 4 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSGRKGS*IAHIHV
Trigger: GACATGGATATGGGCAATCCAGGAACCCTTTCGCCC...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGGGAGCCAGGTTTGGTaGGCGAAAGGGTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDGSQVW*AKGFLD
Trigger: ATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGGGAGCCAGGTTTGGTaGGCGAAAGGGTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLGSQVW*AKGFLD
Trigger: ATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACACTGGGAGCCAGGTTTaGTGGGCGAAAGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDTGSQV*WAKGFL
Trigger: CAGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGT...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTACTGGGAGCCAGGTTTaGTGGGCGAAAGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLTGSQV*WAKGFL
Trigger: CAGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGT...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTATTGTCTGTACCTCCATaGCACTACTGTGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLLSVPP*HYCEEA
Trigger: GGCCTCTTCACAGTAGTGCCATGGAGGTACAGACAA...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GTAGGAGTCCTATGTGTTCACTGCACTACACACCAAAGTCCATTGTTGGAAAGATGTAGTCGGCAGTGCTaGCTGAAGGAGCGTAGACTG +
Preference number: 4 (lower is better)
Translates to: VGVLCVHCTTHQSPLLERCSRQC*LKERRL
Trigger: CAGTCTACGCTCCTTCAGCCAGCACTGCCGACTACA...TCTTTCCAACAATGGACTTTGGTGTGTAGTGCAGTGAACACATAGGACTCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGGGAGGAAGGATAGCCTaGCGAGTCCCTGTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLGGRIA*RVPVVV
Trigger: GACTACAACAGGGACTCGCCAGGCTATCCTTCCTCC...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATCCGGTAATTGTAGCTGCTGGACTGTaGGATATGAGAAGAATTGCC +
Preference number: 4 (lower is better)
Translates to: CWFCYEGSRASPIQYPVIVAAGL*DMRRIA
Trigger: GGCAATTCTTCTCATATCCCACAGTCCAGCAGCTAC...AATTACCGGATATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAGGCTACAGTAGCTGCTaGACTGTGGGATATGAGAAG +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLGYSSC*TVGYEK
Trigger: CTTCTCATATCCCACAGTCCAGCAGCTACTGTAGCC...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CTTCTTTTCAGACAGGCAGCTTTCGGGTTCAGATTCCTTTCTCGAACTTGCTGCGGCTACAGTAGCTGCTaGACTGTGGGATATGAGAAG +
Preference number: 4 (lower is better)
Translates to: LLFRQAAFGFRFLSRTCCGYSSC*TVGYEK
Trigger: CTTCTCATATCCCACAGTCCAGCAGCTACTGTAGCC...GCAGCAAGTTCGAGAAAGGAATCTGAACCCGAAAGCTGCCTGTCTGAAAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR CCA 90 bp CATCGTTCAGGGAGGAGGGGAAGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGGCTCAAACGTTCATGTaGATGCAGGCTACAGTAGCT +
Preference number: 4 (lower is better)
Translates to: HRSGRRGSYCLSSLPFLEAQTFM*MQATVA
Trigger: AGCTACTGTAGCCTGCATCCACATGAACGTTTGAGC...CTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTCCCCTCCTCCCTGAACGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGCACTACGATGGAACGTaGACATCGGAGGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQHYDGT*TSEEDW
Trigger: CCAGTCTTCCTCCGATGTCCACGTTCCATCGTAGTG...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAGGGTCCTTCATAATTaGGAGATGACGAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLRVLHN*EMTRPV
Trigger: GACAGGCCTCGTCATCTCCCAATTATGAAGGACCCT...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGTTTGGCAGGAGAGAATaGCTGCCTCTCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLFGRRE*LPLRAT
Trigger: CGTGGCTCTGAGAGGCAGCCATTCTCTCCTGCCAAA...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGACCGGAACCTGGTTTaGCAGGAGAGAATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDDRNLV*QERMAA
Trigger: GGCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCTGGACCGGAAGTTGTaGGACCGGAACCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLLDRKL*DRNLVW
Trigger: CCAAACCAGGTTCCGGTCCCACAACTTCCGGTCCAG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTGGACCGGAAGTTGTaGGACCGGAACCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDLDRKL*DRNLVW
Trigger: CCAAACCAGGTTCCGGTCCCACAACTTCCGGTCCAG...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGCCCTGGAGGCCTGGTaGCATCCCTCTGTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLALEAW*HPSVRV
Trigger: GACCCTTACAGAGGGATGCCACCAGGCCTCCAGGGC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAGCCCTGGAGGCCTGGTaGCATCCCTCTGTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITALEAW*HPSVRV
Trigger: GACCCTTACAGAGGGATGCCACCAGGCCTCCAGGGC...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCTGGCCCTGGAGGCCTaGTGGCATCCCTCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLLALEA*WHPSVR
Trigger: CCTTACAGAGGGATGCCACCAGGCCTCCAGGGCCAG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACACTGGCCCTGGAGGCCTaGTGGCATCCCTCTGTAAGG +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITLALEA*WHPSVR
Trigger: CCTTACAGAGGGATGCCACCAGGCCTCCAGGGCCAG...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGTTGTCGCTCTTCAGGTaGAGCTGCACCATACGGCCA +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLLSLFR*SCTIRP
Trigger: TGGCCGTATGGTGCAGCTCCACCTGAAGAGCGACAA...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTCCCATCCCAGGGTGTaGGCCAGCCAAGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLSHPRV*ASQGEW
Trigger: CCACTCTCCTTGGCTGGCCCACACCCTGGGATGGGA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACATCCCATCCCAGGGTGTaGGCCAGCCAAGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITSHPRV*ASQGEW
Trigger: CCACTCTCCTTGGCTGGCCCACACCCTGGGATGGGA...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
3UTR CAA 72 bp CCAAACACTGGCACAGTTCAGGGCTCTTCGAGTGCATaGCTCCAGTGTTACAGGTGCATTAATCACAATCCT +
Preference number: 4 (lower is better)
Translates to: PNTGTVQGSSSA*LQCYRCINHNP
Trigger: AGGATTGTGATTAATGCACCTGTAACACTGGAGCAATGCACTCGAAGAGCCCTGAACTGTGCCAGTGTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGAGTTCCCCAGGACCCTaGGCTACTTCTGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLSSPGP*ATSVFY
Trigger: GTAGAAGACAGAAGTAGCTCAGGGTCCTGGGGAACT...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
CDS-3UTR TCA 90 bp CTCGCCCGGGCAATGCTGCATGTAATTCCTACACATGATGTGACTTTTAAGTCCAGAGAGATTGTCATGTaGCCCAAGATCCCTGCTAGT +
Preference number: 4 (lower is better)
Translates to: LARAMLHVIPTHDVTFKSREIVM*PKIPAS
Trigger: ACTAGCAGGGATCTTGGGTCACATGACAATCTCTCT...GGACTTAAAAGTCACATCATGTGTAGGAATTACATGCAGCATTGCCCGGGCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTTGTATTCTGGAATTaGCAAAAGGTGGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRFVFWN*QKVERD
Trigger: ATCTCTCTCCACCTTTTGTCAATTCCAGAATACAAA...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp TGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATCCGGTAATTGCGGGCATTATTGCTTaGATACTGATAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: CWFCYEGSRASPIQYPVIAGIIA*ILIVLG
Trigger: TCCCAGTACTATCAGTATTCAAGCAATAATGCCCGC...AATTACCGGATATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp CATCGTTCAGGGAGGAGGGGAAGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGGCGGGCATTATTGCTTaGATACTGATAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: HRSGRRGSYCLSSLPFLEAGIIA*ILIVLG
Trigger: TCCCAGTACTATCAGTATTCAAGCAATAATGCCCGC...CTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTCCCCTCCTCCCTGAACGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTCTGGACTGTGGGATATaGGAAGAATTGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSLDCGI*EELPSI
Trigger: GATGCTGGGCAATTCTTCTCATATCCCACAGTCCAG...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGCTGGACTGTGGGATATaGGAAGAATTGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQLDCGI*EELPSI
Trigger: GATGCTGGGCAATTCTTCTCATATCCCACAGTCCAG...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGGGAGCCCACAGGAGTTaGAGGATTGGAGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLGAHRS*RIGGKA
Trigger: AGCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCC...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTATTCATAATTGGGAGATaGCGAGGCCTGTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLFIIGR*RGLSSI
Trigger: AATGGAGGACAGGCCTCGTCATCTCCCAATTATGAA...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTTGGTTCCGGAGAACATaGATCGCATCGTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSWFRRT*IASSSL
Trigger: AAGACTGGACGATGCGATTCATGTTCTCCGGAACCA...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTGGTTCCGGAGAACATaGATCGCATCGTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQWFRRT*IASSSL
Trigger: AAGACTGGACGATGCGATTCATGTTCTCCGGAACCA...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCACATCTGTCCCATGTaGTTCGCTGCGTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLHICPM*FAASPI
Trigger: GATGGGAGACGCAGCGAATCACATGGGACAGATGTG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCACATCTGTCCCATGTaGTTCGCTGCGTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDHICPM*FAASPI
Trigger: GATGGGAGACGCAGCGAATCACATGGGACAGATGTG...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATTCTGTCTTCTACATTTaGGCCAGTGAAATGTCCACT +
Preference number: 4 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDSVFYI*ASEMST
Trigger: AGTGGACATTTCACTGGCTCAAATGTAGAAGACAGA...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
CDS-3UTR TCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGTCGGCAGTGCTGGCTaGAGGAGCGTAGACCGCTTT +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLVGSAG*RSVDRF
Trigger: AAAGCGGTCTACGCTCCTTCAGCCAGCACTGCCGAC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114977.5
ENSMUST00000114978.9
CDS-3UTR GCA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGAAAGGGTTCCTGGATTaGCCATATCCATGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQKGFLD*PYPCPL
Trigger: GAGGGGACATGGATATGGGCAATCCAGGAACCCTTT...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TCAGGACGTTTGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATCCGGCGGGCATTATTaGTTGAATACTGATAGTACT +
Preference number: 4 (lower is better)
Translates to: SGRLLVLLRGQPGFPYSISGGHY*LNTDST
Trigger: AGTACTATCAGTATTCAAGCAATAATGCCCGCCGGA...TATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCAAACGTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGTGTTGTAGTCGGCAGTaGTGGCTGAAGGAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLCCSRQ*WLKERR
Trigger: TCTACGCTCCTTCAGCCAGCACTGCCGACTACAACA...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACAGCTCCAAGGGTCGCTaGTGTGATGGCCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDSSKGR*CDGHLA
Trigger: TGCAAGATGGCCATCACAGCAGCGACCCTTGGAGCT...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTAGCTCCAAGGGTCGCTaGTGTGATGGCCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLSSKGR*CDGHLA
Trigger: TGCAAGATGGCCATCACAGCAGCGACCCTTGGAGCT...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGGCAGGCTACAGTAGCTaGTGGACTGTGGGATATGAG +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLAGYSS*WTVGYE
Trigger: CTCATATCCCACAGTCCAGCAGCTACTGTAGCCTGC...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTATGCTGTAATGGTTTGTaGCACTACGATGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLCCNGL*HYDGTW
Trigger: CCACGTTCCATCGTAGTGGCACAAACCATTACAGCA...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CTTCTTTTCAGACAGGCAGCTTTCGGGTTCAGATTCCTTTCTCGAACTTGCTGCTGCTGTAATGGTTTGTaGCACTACGATGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: LLFRQAAFGFRFLSRTCCCCNGL*HYDGTW
Trigger: CCACGTTCCATCGTAGTGGCACAAACCATTACAGCA...GCAGCAAGTTCGAGAAAGGAATCTGAACCCGAAAGCTGCCTGTCTGAAAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR GCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCGTTGGCAGGGGGTGTaGAGGAAGAGGTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLRWQGV*RKRCCN
Trigger: ATTACAGCACCTCTTCCTGCACACCCCCTGCCAACG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCGTTGGCAGGGGGTGTaGAGGAAGAGGTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDRWQGV*RKRCCN
Trigger: ATTACAGCACCTCTTCCTGCACACCCCCTGCCAACG...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCTGCGAGCTGCCTGCTaGCCCAGTTCCTCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLLRAAC*PSSSVC
Trigger: GCAAACAGAGGAACTGGGGCAGCAGGCAGCTCGCAG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACACTGCGAGCTGCCTGCTaGCCCAGTTCCTCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITLRAAC*PSSSVC
Trigger: GCAAACAGAGGAACTGGGGCAGCAGGCAGCTCGCAG...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCTCTTCGATTCGGCTTTaGAGTGAGTGCAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLSSIRL*SECKGP
Trigger: AGGACCCTTGCACTCACTGCAAAGCCGAATCGAAGA...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACATGTGGACGGGCCCACTaGGTGGTTCCGGAGAACATG +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITCGRAH*VVPENM
Trigger: CATGTTCTCCGGAACCACGCAGTGGGCCCGTCCACA...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTGTGGACGGGCCCACTaGGTGGTTCCGGAGAACATG +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLCGRAH*VVPENM
Trigger: CATGTTCTCCGGAACCACGCAGTGGGCCCGTCCACA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTCGCGCTCAGCCTTCTaGTCTGGGGTCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLSRSAF*SGVRSS
Trigger: TGAGGACCTGACCCCAGAGCAGAAGGCTGAGCGCGA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACATCGCGCTCAGCCTTCTaGTCTGGGGTCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITSRSAF*SGVRSS
Trigger: TGAGGACCTGACCCCAGAGCAGAAGGCTGAGCGCGA...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACAGTACATCAAAGAGTTaGCGCCCATGCCCGGGATGG +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDSTSKS*RPCPGW
Trigger: CCATCCCGGGCATGGGCGGCAACTCTTTGATGTACT...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114977.5
ENSMUST00000114978.9
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGTTCCTGGACGGGCTTaGATGGCCTCCAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLVPGRA*MASSSP
Trigger: TGGGGAACTGGAGGCCATCCAAGCCCGTCCAGGAAC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR CCA 90 bp ACTGCGTTACCCCTCCTCACAAAAGTGCAACTTAATGCTTTAGGGCTTATAAGGGGGCGAAAGGGTTCCTaGATTGCCCATATCCATGTC +
Preference number: 4 (lower is better)
Translates to: TALPLLTKVQLNALGLIRGRKGS*IAHIHV
Trigger: GACATGGATATGGGCAATCCAGGAACCCTTTCGCCC...CCTTATAAGCCCTAAAGCATTAAGTTGCACTTTTGTGAGGAGGGGTAACGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTTTGTCTGTACCTCCATaGCACTACTGTGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSLSVPP*HYCEEA
Trigger: GGCCTCTTCACAGTAGTGCCATGGAGGTACAGACAA...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCTTGTCTGTACCTCCATaGCACTACTGTGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLLSVPP*HYCEEA
Trigger: GGCCTCTTCACAGTAGTGCCATGGAGGTACAGACAA...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTGTAGTCGGCAGTGCTaGCTGAAGGAGCGTAGACTG +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLCSRQC*LKERRL
Trigger: CAGTCTACGCTCCTTCAGCCAGCACTGCCGACTACA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTGTAGTCGGCAGTGCTaGCTGAAGGAGCGTAGACTG +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDCSRQC*LKERRL
Trigger: CAGTCTACGCTCCTTCAGCCAGCACTGCCGACTACA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGGAGGAAGGATAGCCTaGCGAGTCCCTGTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLGGRIA*RVPVVV
Trigger: GACTACAACAGGGACTCGCCAGGCTATCCTTCCTCC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGGAGGAAGGATAGCCTaGCGAGTCCCTGTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDGGRIA*RVPVVV
Trigger: GACTACAACAGGGACTCGCCAGGCTATCCTTCCTCC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTGCTGGCTGCTGGCTTaGAGGAAGGATAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLCWLLA*RKDSLA
Trigger: CGCCAGGCTATCCTTCCTCCAAGCCAGCAGCCAGCA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGAAAGTGCTGGCTGCTaGCTTGGAGGAAGGATAGCC +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLESAGC*LGGRIA
Trigger: GGCTATCCTTCCTCCAAGCCAGCAGCCAGCACTTTC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGAAAGTGCTGGCTGCTaGCTTGGAGGAAGGATAGCC +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDESAGC*LGGRIA
Trigger: GGCTATCCTTCCTCCAAGCCAGCAGCCAGCACTTTC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAGCTGATTCATCCCGCTaGAGGAGCTCCAAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITADSSR*RSSKGR
Trigger: GCGACCCTTGGAGCTCCTCCAGCGGGATGAATCAGC...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGCTGATTCATCCCGCTaGAGGAGCTCCAAGGGTCGC +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLADSSR*RSSKGR
Trigger: GCGACCCTTGGAGCTCCTCCAGCGGGATGAATCAGC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAGTAGCTGCTGGACTGTaGGATATGAGAAGAATTGCC +
Preference number: 4 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLVAAGL*DMRRIA
Trigger: GGCAATTCTTCTCATATCCCACAGTCCAGCAGCTAC...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CTTCTTTTCAGACAGGCAGCTTTCGGGTTCAGATTCCTTTCTCGAACTTGCTGCGTAGCTGCTGGACTGTaGGATATGAGAAGAATTGCC +
Preference number: 4 (lower is better)
Translates to: LLFRQAAFGFRFLSRTCCVAAGL*DMRRIA
Trigger: GGCAATTCTTCTCATATCCCACAGTCCAGCAGCTAC...GCAGCAAGTTCGAGAAAGGAATCTGAACCCGAAAGCTGCCTGTCTGAAAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR CCA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTGGCTACAGTAGCTGCTaGACTGTGGGATATGAGAAG +
Preference number: 4 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSGYSSC*TVGYEK
Trigger: CTTCTCATATCCCACAGTCCAGCAGCTACTGTAGCC...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGCACTACGATGGAACGTaGACATCGGAGGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLHYDGT*TSEEDW
Trigger: CCAGTCTTCCTCCGATGTCCACGTTCCATCGTAGTG...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp TTCCAAAAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCTTTGTGCCACTACGATaGAACGTGGACATCGGAGGA +
Preference number: 4 (lower is better)
Translates to: FQKKFRHKCIAPQCGRIAFVPLR*NVDIGG
Trigger: TCCTCCGATGTCCACGTTCCATCGTAGTGGCACAAA...GGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTTTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR CCA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGAGGGTCCTTCATAATTaGGAGATGACGAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQRVLHN*EMTRPV
Trigger: GACAGGCCTCGTCATCTCCCAATTATGAAGGACCCT...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAGGGTCCTTCATAATTaGGAGATGACGAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLRVLHN*EMTRPV
Trigger: GACAGGCCTCGTCATCTCCCAATTATGAAGGACCCT...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAACACCAGGCACAGCTGTaGACGGGCCCACTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKHQAQL*TGPLRG
Trigger: ACCACGCAGTGGGCCCGTCCACAGCTGTGCCTGGTG...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTTTGGCAGGAGAGAATaGCTGCCTCTCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDFGRRE*LPLRAT
Trigger: CGTGGCTCTGAGAGGCAGCCATTCTCTCCTGCCAAA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTTTGGCAGGAGAGAATaGCTGCCTCTCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLFGRRE*LPLRAT
Trigger: CGTGGCTCTGAGAGGCAGCCATTCTCTCCTGCCAAA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACTGCGTTACCCCTCCTCACAAAAGTGCAACTTAATGCTTTAGGGCTTATAAGGGTAAGGGTCTTGGGGTaGGTTCAAGTCAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: TALPLLTKVQLNALGLIRVRVLG*VQVRGS
Trigger: ACTTCCCCTGACTTGAACCCACCCCAAGACCCTTAC...CCTTATAAGCCCTAAAGCATTAAGTTGCACTTTTGTGAGGAGGGGTAACGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAACCAGAAGACACGCTCTaGCCCTGGAGGCCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKPEDTL*PWRPGG
Trigger: GCCACCAGGCCTCCAGGGCCAGAGCGTGTCTTCTGG...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTTGTCGCTCTTCAGGTaGAGCTGCACCATACGGCCA +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDLSLFR*SCTIRP
Trigger: TGGCCGTATGGTGCAGCTCCACCTGAAGAGCGACAA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTTGTCGCTCTTCAGGTaGAGCTGCACCATACGGCCA +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLLSLFR*SCTIRP
Trigger: TGGCCGTATGGTGCAGCTCCACCTGAAGAGCGACAA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACATCAGGAGCTTGGTCTaGGGCTTGTCGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDIRSLV*GLSLFR
Trigger: CCTGAAGAGCGACAAGCCCCAGACCAAGCTCCTGAT...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTATCAGGAGCTTGGTCTaGGGCTTGTCGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLIRSLV*GLSLFR
Trigger: CCTGAAGAGCGACAAGCCCCAGACCAAGCTCCTGAT...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACATGACAGCCACGGCCTaGTGGAGAATCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDMTATA*WRIRSL
Trigger: CAAGCTCCTGATTCTCCACCAGGCCGTGGCTGTCAT...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTATGACAGCCACGGCCTaGTGGAGAATCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLMTATA*WRIRSL
Trigger: CAAGCTCCTGATTCTCCACCAGGCCGTGGCTGTCAT...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTGTAGTCGGCAGTGCTaGCTGAAGGAGCGTAGACCT +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLCSRQC*LKERRP
Trigger: AGGTCTACGCTCCTTCAGCCAGCACTGCCGACTACA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202772.4
CDS-3UTR TCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTAGTTCCCCAGGACCCTaGGCTACTTCTGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLSSPGP*ATSVFY
Trigger: GTAGAAGACAGAAGTAGCTCAGGGTCCTGGGGAACT...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR TCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACAGTTCCCCAGGACCCTaGGCTACTTCTGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDSSPGP*ATSVFY
Trigger: GTAGAAGACAGAAGTAGCTCAGGGTCCTGGGGAACT...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR TCA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTAGAGAGATTGTCATGTaGCCCAAGATCCCTGCTAGT +
Preference number: 4 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSREIVM*PKIPAS
Trigger: ACTAGCAGGGATCTTGGGTCACATGACAATCTCTCT...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGTTTGTATTCTGGAATTaGCAAAAGGTGGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVFVFWN*QKVERD
Trigger: ATCTCTCTCCACCTTTTGTCAATTCCAGAATACAAA...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCATTTGTATTCTGGAATTaGCAAAAGGTGGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: RIAIQSLGCVSACTYRFAFVFWN*QKVERD
Trigger: ATCTCTCTCCACCTTTTGTCAATTCCAGAATACAAA...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAATCCATGGCACTACTGTaGAGAGGCCTCCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKSMALL*RGLRRA
Trigger: TGCCCGCCGGAGGCCTCTTCACAGTAGTGCCATGGA...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp ACTGCGTTACCCCTCCTCACAAAAGTGCAACTTAATGCTTTAGGGCTTATAAGGCTGGACTGTGGGATATaGGAAGAATTGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: TALPLLTKVQLNALGLIRLDCGI*EELPSI
Trigger: GATGCTGGGCAATTCTTCTCATATCCCACAGTCCAG...CCTTATAAGCCCTAAAGCATTAAGTTGCACTTTTGTGAGGAGGGGTAACGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGCTGGACTGTGGGATATaGGAAGAATTGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLLDCGI*EELPSI
Trigger: GATGCTGGGCAATTCTTCTCATATCCCACAGTCCAG...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGGAGCCCACAGGAGTTaGAGGATTGGAGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDGAHRS*RIGGKA
Trigger: AGCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGGAGCCCACAGGAGTTaGAGGATTGGAGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLGAHRS*RIGGKA
Trigger: AGCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCTTCATAATTGGGAGATaGCGAGGCCTGTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLFIIGR*RGLSSI
Trigger: AATGGAGGACAGGCCTCGTCATCTCCCAATTATGAA...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGTGGTTCCGGAGAACATaGATCGCATCGTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLWFRRT*IASSSL
Trigger: AAGACTGGACGATGCGATTCATGTTCTCCGGAACCA...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACATGTGGGAGGGTCCCATaGTCCCATGCATGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITCGRVP*SHACPH
Trigger: ATGGGGACATGCATGGGATCATGGGACCCTCCCACA...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTGTGGGAGGGTCCCATaGTCCCATGCATGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLCGRVP*SHACPH
Trigger: ATGGGGACATGCATGGGATCATGGGACCCTCCCACA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp CATCGTTCAGGGAGGAGGGGAAGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGTCTGTCTTCTACATTTaGGCCAGTGAAATGTCCACT +
Preference number: 4 (lower is better)
Translates to: HRSGRRGSYCLSSLPFLESVFYI*ASEMST
Trigger: AGTGGACATTTCACTGGCTCAAATGTAGAAGACAGA...CTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTCCCCTCCTCCCTGAACGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp CAAGTCAAATACACAGGTGTGTGGGTTAATCTAGCACATTTGCAAAACCCATTACCAGGCAGTACTTACTaGAGACGGCAAACCCGGAGG +
Preference number: 4 (lower is better)
Translates to: QVKYTGVWVNLAHLQNPLPGSTY*RRQTRR
Trigger: CCTCCGGGTTTGCCGTCTTCAGTAAGTACTGCCTGG...TAATGGGTTTTGCAAATGTGCTAGATTAACCCACACACCTGTGTATTTGACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR GCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTGTTGTAGTCGGCAGTaGTGGCTGAAGGAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLCCSRQ*WLKERR
Trigger: TCTACGCTCCTTCAGCCAGCACTGCCGACTACAACA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTGTTGTAGTCGGCAGTaGTGGCTGAAGGAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDCCSRQ*WLKERR
Trigger: TCTACGCTCCTTCAGCCAGCACTGCCGACTACAACA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACAGGGAAAGTGCTGGCTaGTGGCTTGGAGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDRESAG*WLGGRI
Trigger: TATCCTTCCTCCAAGCCAGCAGCCAGCACTTTCCCT...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTAGGGAAAGTGCTGGCTaGTGGCTTGGAGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLRESAG*WLGGRI
Trigger: TATCCTTCCTCCAAGCCAGCAGCCAGCACTTTCCCT...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGCAGGCTACAGTAGCTaGTGGACTGTGGGATATGAG +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDAGYSS*WTVGYE
Trigger: CTCATATCCCACAGTCCAGCAGCTACTGTAGCCTGC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGCAGGCTACAGTAGCTaGTGGACTGTGGGATATGAG +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLAGYSS*WTVGYE
Trigger: CTCATATCCCACAGTCCAGCAGCTACTGTAGCCTGC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTTGCTGTAATGGTTTGTaGCACTACGATGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSCCNGL*HYDGTW
Trigger: CCACGTTCCATCGTAGTGGCACAAACCATTACAGCA...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCTGCTGTAATGGTTTGTaGCACTACGATGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLCCNGL*HYDGTW
Trigger: CCACGTTCCATCGTAGTGGCACAAACCATTACAGCA...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TTCCAAAAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCTGCTGTAATGGTTTGTaGCACTACGATGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: FQKKFRHKCIAPQCGRIACCNGL*HYDGTW
Trigger: CCACGTTCCATCGTAGTGGCACAAACCATTACAGCA...GGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTTTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR GCA 90 bp TATGTTTCCGATGATATAAACATTGGAAGGCACAGTGGTAACATTGTAGCATTCCTGCGAGCTGCCTGCTaGCCCAGTTCCTCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: YVSDDINIGRHSGNIVAFLRAAC*PSSSVC
Trigger: GCAAACAGAGGAACTGGGGCAGCAGGCAGCTCGCAG...GAATGCTACAATGTTACCACTGTGCCTTCCAATGTTTATATCATCGGAAACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGAGTCTGCGAGCTGCCTaGTGCCCCAGTTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLSLRAA*CPSSSV
Trigger: AACAGAGGAACTGGGGCAGCAGGCAGCTCGCAGACT...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp ATATATATTTGTCATAGGTCTATAACATCCATCTGTCCCTCCTACCCTAAGGAATGTGGACGGGCCCACTaGGTGGTTCCGGAGAACATG +
Preference number: 4 (lower is better)
Translates to: IYICHRSITSICPSYPKECGRAH*VVPENM
Trigger: CATGTTCTCCGGAACCACGCAGTGGGCCCGTCCACA...TTCCTTAGGGTAGGAGGGACAGATGGATGTTATAGACCTATGACAAATATATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAGGTCCCATGATCCCATaGATGTCCCCATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITGPMIP*MSPWPP
Trigger: TGGTGGCCATGGGGACATGCATGGGATCATGGGACC...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGGTCCCATGATCCCATaGATGTCCCCATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLGPMIP*MSPWPP
Trigger: TGGTGGCCATGGGGACATGCATGGGATCATGGGACC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp GAAACACTAGCTGACGTGAATACCAACAAAAACGTTCATGTCGTTTTCTTCAGAGCAGGAGAGAATGGCTaGCTCTCAGAGCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: ETLADVNTNKNVHVVFFRAGENG*LSEPRH
Trigger: ATGGCGTGGCTCTGAGAGGCAGCCATTCTCTCCTGC...TCTGAAGAAAACGACATGAACGTTTTTGTTGGTATTCACGTCAGCTAGTGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGCAGGAGAGAATGGCTaGCTCTCAGAGCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLAGENG*LSEPRH
Trigger: ATGGCGTGGCTCTGAGAGGCAGCCATTCTCTCCTGC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAGCAGGAGAGAATGGCTaGCTCTCAGAGCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITAGENG*LSEPRH
Trigger: ATGGCGTGGCTCTGAGAGGCAGCCATTCTCTCCTGC...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCAAGTCAGGGGAAGTTaGAGACTGGACCGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDQVRGS*RLDRKL
Trigger: CAACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTG...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCAAGTCAGGGGAAGTTaGAGACTGGACCGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLQVRGS*RLDRKL
Trigger: CAACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp TTCCAAAAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCGAAGATTTTGTGTCTTaGAGGTTCTCATCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: FQKKFRHKCIAPQCGRIAEDFVS*RFSSPS
Trigger: CGAGGGCGATGAGAACCTGCAAGACACAAAATCTTC...GGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTTTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR GCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCGAAGATTTTGTGTCTTaGAGGTTCTCATCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLEDFVS*RFSSPS
Trigger: CGAGGGCGATGAGAACCTGCAAGACACAAAATCTTC...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGGAAGATTTTGTGTCTTaGAGGTTCTCATCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQEDFVS*RFSSPS
Trigger: CGAGGGCGATGAGAACCTGCAAGACACAAAATCTTC...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp TATGTTTCCGATGATATAAACATTGGAAGGCACAGTGGTAACATTGTAGCATTCTCGCGCTCAGCCTTCTaGTCTGGGGTCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: YVSDDINIGRHSGNIVAFSRSAF*SGVRSS
Trigger: TGAGGACCTGACCCCAGAGCAGAAGGCTGAGCGCGA...GAATGCTACAATGTTACCACTGTGCCTTCCAATGTTTATATCATCGGAAACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACACTCTTCAGGTGGAGCTaGACCATACGGCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITLFRWS*TIRPSS
Trigger: GGAGCTTGGCCGTATGGTGCAGCTCCACCTGAAGAG...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCTCTTCAGGTGGAGCTaGACCATACGGCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLLFRWS*TIRPSS
Trigger: GGAGCTTGGCCGTATGGTGCAGCTCCACCTGAAGAG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp GTAGGAGTCCTATGTGTTCACTGCACTACACACCAAAGTCCATTGTTGGAAAGACTTTCTCGAACTTGCTaGTCCAGGCTGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: VGVLCVHCTTHQSPLLERLSRTC*SRLRMT
Trigger: TGTCATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAG...TCTTTCCAACAATGGACTTTGGTGTGTAGTGCAGTGAACACATAGGACTCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp GAAACACTAGCTGACGTGAATACCAACAAAAACGTTCATGTCGTTTTCTTCAGATCCCATGTGATTCGCTaGGTCTCCCATCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ETLADVNTNKNVHVVFFRSHVIR*VSHPRV
Trigger: CACCCTGGGATGGGAGACGCAGCGAATCACATGGGA...TCTGAAGAAAACGACATGAACGTTTTTGTTGGTATTCACGTCAGCTAGTGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTCCCATGTGATTCGCTaGGTCTCCCATCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLSHVIR*VSHPRV
Trigger: CACCCTGGGATGGGAGACGCAGCGAATCACATGGGA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACATCCCATGTGATTCGCTaGGTCTCCCATCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITSHVIR*VSHPRV
Trigger: CACCCTGGGATGGGAGACGCAGCGAATCACATGGGA...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGGGCGAAAGGGTTCCTaGATTGCCCATATCCATGTC +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDGRKGS*IAHIHV
Trigger: GACATGGATATGGGCAATCCAGGAACCCTTTCGCCC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGGGCGAAAGGGTTCCTaGATTGCCCATATCCATGTC +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLGRKGS*IAHIHV
Trigger: GACATGGATATGGGCAATCCAGGAACCCTTTCGCCC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAGGGAGCCAGGTTTGGTaGGCGAAAGGGTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITGSQVW*AKGFLD
Trigger: ATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCC...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGGGAGCCAGGTTTGGTaGGCGAAAGGGTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLGSQVW*AKGFLD
Trigger: ATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAACTGGGAGCCAGGTTTaGTGGGCGAAAGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITTGSQV*WAKGFL
Trigger: CAGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGT...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGACTGGGAGCCAGGTTTaGTGGGCGAAAGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLTGSQV*WAKGFL
Trigger: CAGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGT...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGGTAGCTGCTGGACTGTaGGATATGAGAAGAATTGCC +
Preference number: 4 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQVAAGL*DMRRIA
Trigger: GGCAATTCTTCTCATATCCCACAGTCCAGCAGCTAC...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCGCTCAAACGTTCATGTaGATGCAGGCTACAGTAGCT +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLAQTFM*MQATVA
Trigger: AGCTACTGTAGCCTGCATCCACATGAACGTTTGAGC...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTGCTCAAACGTTCATGTaGATGCAGGCTACAGTAGCT +
Preference number: 4 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSAQTFM*MQATVA
Trigger: AGCTACTGTAGCCTGCATCCACATGAACGTTTGAGC...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCACTACGATGGAACGTaGACATCGGAGGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLHYDGT*TSEEDW
Trigger: CCAGTCTTCCTCCGATGTCCACGTTCCATCGTAGTG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCACTACGATGGAACGTaGACATCGGAGGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDHYDGT*TSEEDW
Trigger: CCAGTCTTCCTCCGATGTCCACGTTCCATCGTAGTG...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCGGAACCTGGTTTaGCAGGAGAGAATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLDRNLV*QERMAA
Trigger: GGCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACACTGGACCGGAAGTTGTaGGACCGGAACCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITLDRKL*DRNLVW
Trigger: CCAAACCAGGTTCCGGTCCCACAACTTCCGGTCCAG...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCTGGACCGGAAGTTGTaGGACCGGAACCTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLLDRKL*DRNLVW
Trigger: CCAAACCAGGTTCCGGTCCCACAACTTCCGGTCCAG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGTAAGGGTCTTGGGGTaGGTTCAAGTCAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDVRVLG*VQVRGS
Trigger: ACTTCCCCTGACTTGAACCCACCCCAAGACCCTTAC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGTAAGGGTCTTGGGGTaGGTTCAAGTCAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLVRVLG*VQVRGS
Trigger: ACTTCCCCTGACTTGAACCCACCCCAAGACCCTTAC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGCCCTGGAGGCCTGGTaGCATCCCTCTGTAAGGGTC +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKALEAW*HPSVRV
Trigger: GACCCTTACAGAGGGATGCCACCAGGCCTCCAGGGC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGCTCACGGGCATTATTaGCCATCCTCCGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDAHGHY*PSSVPS
Trigger: AGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGCTCACGGGCATTATTaGCCATCCTCCGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLAHGHY*PSSVPS
Trigger: AGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAATCCCATCCCAGGGTGTaGGCCAGCCAAGGAGAGTGG +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKSHPRV*ASQGEW
Trigger: CCACTCTCCTTGGCTGGCCCACACCCTGGGATGGGA...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCGCGGGCATTATTGCTTaGATACTGATAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLAGIIA*ILIVLG
Trigger: TCCCAGTACTATCAGTATTCAAGCAATAATGCCCGC...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTGGACTGTGGGATATaGGAAGAATTGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDLDCGI*EELPSI
Trigger: GATGCTGGGCAATTCTTCTCATATCCCACAGTCCAG...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCTGGACTGTGGGATATaGGAAGAATTGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLLDCGI*EELPSI
Trigger: GATGCTGGGCAATTCTTCTCATATCCCACAGTCCAG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGTTCATAATTGGGAGATaGCGAGGCCTGTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLFIIGR*RGLSSI
Trigger: AATGGAGGACAGGCCTCGTCATCTCCCAATTATGAA...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR TCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTGGTTCCGGAGAACATaGATCGCATCGTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDWFRRT*IASSSL
Trigger: AAGACTGGACGATGCGATTCATGTTCTCCGGAACCA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTGGTTCCGGAGAACATaGATCGCATCGTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLWFRRT*IASSSL
Trigger: AAGACTGGACGATGCGATTCATGTTCTCCGGAACCA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCACATCTGTCCCATGTaGTTCGCTGCGTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLHICPM*FAASPI
Trigger: GATGGGAGACGCAGCGAATCACATGGGACAGATGTG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACACACATCTGTCCCATGTaGTTCGCTGCGTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITHICPM*FAASPI
Trigger: GATGGGAGACGCAGCGAATCACATGGGACAGATGTG...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGCTACATTTGAGCCAGTaGAATGTCCACTCGCCAAAG +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLLHLSQ*NVHSPK
Trigger: CTTTGGCGAGTGGACATTTCACTGGCTCAAATGTAG...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
CDS-3UTR GCA 90 bp GAAACACTAGCTGACGTGAATACCAACAAAAACGTTCATGTCGTTTTCTTCAGAAGCTCCAAGGGTCGCTaGTGTGATGGCCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: ETLADVNTNKNVHVVFFRSSKGR*CDGHLA
Trigger: TGCAAGATGGCCATCACAGCAGCGACCCTTGGAGCT...TCTGAAGAAAACGACATGAACGTTTTTGTTGGTATTCACGTCAGCTAGTGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGAGCTCCAAGGGTCGCTaGTGTGATGGCCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLSSKGR*CDGHLA
Trigger: TGCAAGATGGCCATCACAGCAGCGACCCTTGGAGCT...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAGCTCCAAGGGTCGCTaGTGTGATGGCCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITSSKGR*CDGHLA
Trigger: TGCAAGATGGCCATCACAGCAGCGACCCTTGGAGCT...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGTGCTGTAATGGTTTGTaGCACTACGATGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLCCNGL*HYDGTW
Trigger: CCACGTTCCATCGTAGTGGCACAAACCATTACAGCA...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGTGTGCAGGAAGAGGTaGTGTAATGGTTTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLVCRKR*CNGLCH
Trigger: GTGGCACAAACCATTACAGCACCTCTTCCTGCACAC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGTGTGCAGGAAGAGGTaGTGTAATGGTTTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDVCRKR*CNGLCH
Trigger: GTGGCACAAACCATTACAGCACCTCTTCCTGCACAC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACACGTTGGCAGGGGGTGTaGAGGAAGAGGTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITRWQGV*RKRCCN
Trigger: ATTACAGCACCTCTTCCTGCACACCCCCTGCCAACG...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCGTTGGCAGGGGGTGTaGAGGAAGAGGTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLRWQGV*RKRCCN
Trigger: ATTACAGCACCTCTTCCTGCACACCCCCTGCCAACG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTCCCAGTTCCTCTGTTTaGCATTATACTGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSPSSSV*HYTVCS
Trigger: GGAACAGACAGTATAATGGCAAACAGAGGAACTGGG...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGCCCAGTTCCTCTGTTTaGCATTATACTGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQPSSSV*HYTVCS
Trigger: GGAACAGACAGTATAATGGCAAACAGAGGAACTGGG...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCCCCAGTTCCTCTGTTTaGCATTATACTGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLPSSSV*HYTVCS
Trigger: GGAACAGACAGTATAATGGCAAACAGAGGAACTGGG...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAACTGCGAGCTGCCTGCTaGCCCAGTTCCTCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKLRAAC*PSSSVC
Trigger: GCAAACAGAGGAACTGGGGCAGCAGGCAGCTCGCAG...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp ATATATATTTGTCATAGGTCTATAACATCCATCTGTCCCTCCTACCCTAAGGAAAGTCTGCGAGCTGCCTaGTGCCCCAGTTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: IYICHRSITSICPSYPKESLRAA*CPSSSV
Trigger: AACAGAGGAACTGGGGCAGCAGGCAGCTCGCAGACT...TTCCTTAGGGTAGGAGGGACAGATGGATGTTATAGACCTATGACAAATATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTCTTCGATTCGGCTTTaGAGTGAGTGCAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLSSIRL*SECKGP
Trigger: AGGACCCTTGCACTCACTGCAAAGCCGAATCGAAGA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTCTTCGATTCGGCTTTaGAGTGAGTGCAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDSSIRL*SECKGP
Trigger: AGGACCCTTGCACTCACTGCAAAGCCGAATCGAAGA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp ATATATATTTGTCATAGGTCTATAACATCCATCTGTCCCTCCTACCCTAAGGAAGGTCCCATGATCCCATaGATGTCCCCATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: IYICHRSITSICPSYPKEGPMIP*MSPWPP
Trigger: TGGTGGCCATGGGGACATGCATGGGATCATGGGACC...TTCCTTAGGGTAGGAGGGACAGATGGATGTTATAGACCTATGACAAATATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp ATATATATTTGTCATAGGTCTATAACATCCATCTGTCCCTCCTACCCTAAGGAAGCAGGAGAGAATGGCTaGCTCTCAGAGCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: IYICHRSITSICPSYPKEAGENG*LSEPRH
Trigger: ATGGCGTGGCTCTGAGAGGCAGCCATTCTCTCCTGC...TTCCTTAGGGTAGGAGGGACAGATGGATGTTATAGACCTATGACAAATATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAATCGCGCTCAGCCTTCTaGTCTGGGGTCAGGTCCTCA +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKSRSAF*SGVRSS
Trigger: TGAGGACCTGACCCCAGAGCAGAAGGCTGAGCGCGA...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCTTTCTCGAACTTGCTaGTCCAGGCTGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLLSRTC*SRLRMT
Trigger: TGTCATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTCTCGAACTTGCTaGTCCAGGCTGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDLSRTC*SRLRMT
Trigger: TGTCATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAG...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGAGTACATCAAAGAGTTaGCGCCCATGCCCGGGATGG +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLSTSKS*RPCPGW
Trigger: CCATCCCGGGCATGGGCGGCAACTCTTTGATGTACT...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000114977.5
ENSMUST00000114978.9
CDS-3UTR CCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCACTCGCCAAAGAAGTTaGTCCATTTTTCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLTRQRS*SIFPTA
Trigger: AGCAGTGGGAAAAATGGACCAACTTCTTTGGCGAGT...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
CDS-3UTR CCA 90 bp TTCCAAAAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCACTCGCCAAAGAAGTTaGTCCATTTTTCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: FQKKFRHKCIAPQCGRIATRQRS*SIFPTA
Trigger: AGCAGTGGGAAAAATGGACCAACTTCTTTGGCGAGT...GGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTTTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR CCA 90 bp TATGTTTCCGATGATATAAACATTGGAAGGCACAGTGGTAACATTGTAGCATTCGGGAGCCAGGTTTGGTaGGCGAAAGGGTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: YVSDDINIGRHSGNIVAFGSQVW*AKGFLD
Trigger: ATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCC...GAATGCTACAATGTTACCACTGTGCCTTCCAATGTTTATATCATCGGAAACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp TATGTTTCCGATGATATAAACATTGGAAGGCACAGTGGTAACATTGTAGCATTCACTGGGAGCCAGGTTTaGTGGGCGAAAGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: YVSDDINIGRHSGNIVAFTGSQV*WAKGFL
Trigger: CAGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGT...GAATGCTACAATGTTACCACTGTGCCTTCCAATGTTTATATCATCGGAAACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTTGTCTGTACCTCCATaGCACTACTGTGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDLSVPP*HYCEEA
Trigger: GGCCTCTTCACAGTAGTGCCATGGAGGTACAGACAA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTTGTCTGTACCTCCATaGCACTACTGTGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLLSVPP*HYCEEA
Trigger: GGCCTCTTCACAGTAGTGCCATGGAGGTACAGACAA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACATGTAGTCGGCAGTGCTaGCTGAAGGAGCGTAGACTG +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITCSRQC*LKERRL
Trigger: CAGTCTACGCTCCTTCAGCCAGCACTGCCGACTACA...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGGAGGAAGGATAGCCTaGCGAGTCCCTGTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLGGRIA*RVPVVV
Trigger: GACTACAACAGGGACTCGCCAGGCTATCCTTCCTCC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAGGAGGAAGGATAGCCTaGCGAGTCCCTGTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITGGRIA*RVPVVV
Trigger: GACTACAACAGGGACTCGCCAGGCTATCCTTCCTCC...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAATGCTGGCTGCTGGCTTaGAGGAAGGATAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKCWLLA*RKDSLA
Trigger: CGCCAGGCTATCCTTCCTCCAAGCCAGCAGCCAGCA...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGAAAGTGCTGGCTGCTaGCTTGGAGGAAGGATAGCC +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLESAGC*LGGRIA
Trigger: GGCTATCCTTCCTCCAAGCCAGCAGCCAGCACTTTC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAGAAAGTGCTGGCTGCTaGCTTGGAGGAAGGATAGCC +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITESAGC*LGGRIA
Trigger: GGCTATCCTTCCTCCAAGCCAGCAGCCAGCACTTTC...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGGCTACAGTAGCTGCTaGACTGTGGGATATGAGAAG +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLGYSSC*TVGYEK
Trigger: CTTCTCATATCCCACAGTCCAGCAGCTACTGTAGCC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGGCTACAGTAGCTGCTaGACTGTGGGATATGAGAAG +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDGYSSC*TVGYEK
Trigger: CTTCTCATATCCCACAGTCCAGCAGCTACTGTAGCC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTTTGTGCCACTACGATaGAACGTGGACATCGGAGGA +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLFVPLR*NVDIGG
Trigger: TCCTCCGATGTCCACGTTCCATCGTAGTGGCACAAA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTTTGTGCCACTACGATaGAACGTGGACATCGGAGGA +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDFVPLR*NVDIGG
Trigger: TCCTCCGATGTCCACGTTCCATCGTAGTGGCACAAA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTAGGGTCCTTCATAATTaGGAGATGACGAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLRVLHN*EMTRPV
Trigger: GACAGGCCTCGTCATCTCCCAATTATGAAGGACCCT...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACAGGGTCCTTCATAATTaGGAGATGACGAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDRVLHN*EMTRPV
Trigger: GACAGGCCTCGTCATCTCCCAATTATGAAGGACCCT...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACATTTGGCAGGAGAGAATaGCTGCCTCTCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITFGRRE*LPLRAT
Trigger: CGTGGCTCTGAGAGGCAGCCATTCTCTCCTGCCAAA...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTTTGGCAGGAGAGAATaGCTGCCTCTCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLFGRRE*LPLRAT
Trigger: CGTGGCTCTGAGAGGCAGCCATTCTCTCCTGCCAAA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ATATATATTTGTCATAGGTCTATAACATCCATCTGTCCCTCCTACCCTAAGGAAGACCGGAACCTGGTTTaGCAGGAGAGAATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: IYICHRSITSICPSYPKEDRNLV*QERMAA
Trigger: GGCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTC...TTCCTTAGGGTAGGAGGGACAGATGGATGTTATAGACCTATGACAAATATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTTGTCGCTCTTCAGGTaGAGCTGCACCATACGGCCA +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLLSLFR*SCTIRP
Trigger: TGGCCGTATGGTGCAGCTCCACCTGAAGAGCGACAA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACATTGTCGCTCTTCAGGTaGAGCTGCACCATACGGCCA +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITLSLFR*SCTIRP
Trigger: TGGCCGTATGGTGCAGCTCCACCTGAAGAGCGACAA...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GAAACACTAGCTGACGTGAATACCAACAAAAACGTTCATGTCGTTTTCTTCAGAATCAGGAGCTTGGTCTaGGGCTTGTCGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ETLADVNTNKNVHVVFFRIRSLV*GLSLFR
Trigger: CCTGAAGAGCGACAAGCCCCAGACCAAGCTCCTGAT...TCTGAAGAAAACGACATGAACGTTTTTGTTGGTATTCACGTCAGCTAGTGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAATCAGGAGCTTGGTCTaGGGCTTGTCGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITIRSLV*GLSLFR
Trigger: CCTGAAGAGCGACAAGCCCCAGACCAAGCTCCTGAT...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGATCAGGAGCTTGGTCTaGGGCTTGTCGCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLIRSLV*GLSLFR
Trigger: CCTGAAGAGCGACAAGCCCCAGACCAAGCTCCTGAT...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGATGACAGCCACGGCCTaGTGGAGAATCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLMTATA*WRIRSL
Trigger: CAAGCTCCTGATTCTCCACCAGGCCGTGGCTGTCAT...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAATGACAGCCACGGCCTaGTGGAGAATCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITMTATA*WRIRSL
Trigger: CAAGCTCCTGATTCTCCACCAGGCCGTGGCTGTCAT...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTGTAGTCGGCAGTGCTaGCTGAAGGAGCGTAGACCT +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLCSRQC*LKERRP
Trigger: AGGTCTACGCTCCTTCAGCCAGCACTGCCGACTACA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202772.4
3UTR CAA 72 bp GAAAGACAAAACAAAACCAGGAATCGGAAGACTGAATaGGAATCAGTTGGACCACTGGGTGGGCTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: ERQNKTRNRKTE*ESVGPLGGLKA
Trigger: AGCTTTCAGCCCACCCAGTGGTCCAACTGATTCCAATTCAGTCTTCCGATTCCTGGTTTTGTTTTGTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR CAA 72 bp TGCTTGGGTTTCAGCTGGATTCTCCTAGCCTCACTTTaGCAAACAGTGACCACCTTTGCAGCTCTTATTCAT +
Preference number: 4 (lower is better)
Translates to: CLGFSWILLASL*QTVTTFAALIH
Trigger: ATGAATAAGAGCTGCAAAGGTGGTCACTGTTTGCAAAAGTGAGGCTAGGAGAATCCAGCTGAAACCCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR TCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAGTTCCCCAGGACCCTaGGCTACTTCTGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITSSPGP*ATSVFY
Trigger: GTAGAAGACAGAAGTAGCTCAGGGTCCTGGGGAACT...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202674.4
CDS-3UTR TCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTAGAGAGATTGTCATGTaGCCCAAGATCCCTGCTAGT +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLREIVM*PKIPAS
Trigger: ACTAGCAGGGATCTTGGGTCACATGACAATCTCTCT...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR TCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACAGAGAGATTGTCATGTaGCCCAAGATCCCTGCTAGT +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDREIVM*PKIPAS
Trigger: ACTAGCAGGGATCTTGGGTCACATGACAATCTCTCT...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR TCA 90 bp TGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATCCGGTAATTTTTGTATTCTGGAATTaGCAAAAGGTGGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: CWFCYEGSRASPIQYPVIFVFWN*QKVERD
Trigger: ATCTCTCTCCACCTTTTGTCAATTCCAGAATACAAA...AATTACCGGATATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp AATCCTTTAATTAGTTACTCCTCTAGACAGCTTTCTGTGTGCTTGCAAGCATCCCTGGACTGTGGGATATaGGAAGAATTGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: NPLISYSSRQLSVCLQASLDCGI*EELPSI
Trigger: GATGCTGGGCAATTCTTCTCATATCCCACAGTCCAG...GGATGCTTGCAAGCACACAGAAAGCTGTCTAGAGGAGTAACTAATTAAAGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGGAGCCCACAGGAGTTaGAGGATTGGAGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLGAHRS*RIGGKA
Trigger: AGCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAGGAGCCCACAGGAGTTaGAGGATTGGAGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITGAHRS*RIGGKA
Trigger: AGCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCC...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTTCATAATTGGGAGATaGCGAGGCCTGTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLFIIGR*RGLSSI
Trigger: AATGGAGGACAGGCCTCGTCATCTCCCAATTATGAA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTTCATAATTGGGAGATaGCGAGGCCTGTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDFIIGR*RGLSSI
Trigger: AATGGAGGACAGGCCTCGTCATCTCCCAATTATGAA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAATGTGGGAGGGTCCCATaGTCCCATGCATGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKCGRVP*SHACPH
Trigger: ATGGGGACATGCATGGGATCATGGGACCCTCCCACA...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCTACATTTGAGCCAGTaGAATGTCCACTCGCCAAAG +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLLHLSQ*NVHSPK
Trigger: CTTTGGCGAGTGGACATTTCACTGGCTCAAATGTAG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR GCA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCTCCGGCGGGCATTATTaGTTGAATACTGATAGTACT +
Preference number: 4 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLSGGHY*LNTDST
Trigger: AGTACTATCAGTATTCAAGCAATAATGCCCGCCGGA...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTGTTGTAGTCGGCAGTaGTGGCTGAAGGAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLCCSRQ*WLKERR
Trigger: TCTACGCTCCTTCAGCCAGCACTGCCGACTACAACA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGAGGGAAAGTGCTGGCTaGTGGCTTGGAGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLRESAG*WLGGRI
Trigger: TATCCTTCCTCCAAGCCAGCAGCCAGCACTTTCCCT...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAGGGAAAGTGCTGGCTaGTGGCTTGGAGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITRESAG*WLGGRI
Trigger: TATCCTTCCTCCAAGCCAGCAGCCAGCACTTTCCCT...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp TATGTTTCCGATGATATAAACATTGGAAGGCACAGTGGTAACATTGTAGCATTCAGCTCCAAGGGTCGCTaGTGTGATGGCCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: YVSDDINIGRHSGNIVAFSSKGR*CDGHLA
Trigger: TGCAAGATGGCCATCACAGCAGCGACCCTTGGAGCT...GAATGCTACAATGTTACCACTGTGCCTTCCAATGTTTATATCATCGGAAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGCAGGCTACAGTAGCTaGTGGACTGTGGGATATGAG +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLAGYSS*WTVGYE
Trigger: CTCATATCCCACAGTCCAGCAGCTACTGTAGCCTGC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAGCAGGCTACAGTAGCTaGTGGACTGTGGGATATGAG +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITAGYSS*WTVGYE
Trigger: CTCATATCCCACAGTCCAGCAGCTACTGTAGCCTGC...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTGCTGTAATGGTTTGTaGCACTACGATGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLCCNGL*HYDGTW
Trigger: CCACGTTCCATCGTAGTGGCACAAACCATTACAGCA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp TATGTTTCCGATGATATAAACATTGGAAGGCACAGTGGTAACATTGTAGCATTCCGTTGGCAGGGGGTGTaGAGGAAGAGGTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: YVSDDINIGRHSGNIVAFRWQGV*RKRCCN
Trigger: ATTACAGCACCTCTTCCTGCACACCCCCTGCCAACG...GAATGCTACAATGTTACCACTGTGCCTTCCAATGTTTATATCATCGGAAACATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAAGTCTGCGAGCTGCCTaGTGCCCCAGTTCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKSLRAA*CPSSSV
Trigger: AACAGAGGAACTGGGGCAGCAGGCAGCTCGCAGACT...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGGTCCCATGATCCCATaGATGTCCCCATGGCCACCA +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKGPMIP*MSPWPP
Trigger: TGGTGGCCATGGGGACATGCATGGGATCATGGGACC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGCAGGAGAGAATGGCTaGCTCTCAGAGCCACGCCAT +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKAGENG*LSEPRH
Trigger: ATGGCGTGGCTCTGAGAGGCAGCCATTCTCTCCTGC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACACAAGTCAGGGGAAGTTaGAGACTGGACCGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITQVRGS*RLDRKL
Trigger: CAACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTG...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCAAGTCAGGGGAAGTTaGAGACTGGACCGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLQVRGS*RLDRKL
Trigger: CAACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGAAGATTTTGTGTCTTaGAGGTTCTCATCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDEDFVS*RFSSPS
Trigger: CGAGGGCGATGAGAACCTGCAAGACACAAAATCTTC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGAAGATTTTGTGTCTTaGAGGTTCTCATCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLEDFVS*RFSSPS
Trigger: CGAGGGCGATGAGAACCTGCAAGACACAAAATCTTC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAACTCTTCAGGTGGAGCTaGACCATACGGCCAAGCTCC +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKLFRWS*TIRPSS
Trigger: GGAGCTTGGCCGTATGGTGCAGCTCCACCTGAAGAG...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAATCCCATGTGATTCGCTaGGTCTCCCATCCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKSHVIR*VSHPRV
Trigger: CACCCTGGGATGGGAGACGCAGCGAATCACATGGGA...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGGGCGAAAGGGTTCCTaGATTGCCCATATCCATGTC +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLGRKGS*IAHIHV
Trigger: GACATGGATATGGGCAATCCAGGAACCCTTTCGCCC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
CDS-3UTR CCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGGGAGCCAGGTTTGGTaGGCGAAAGGGTTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKGSQVW*AKGFLD
Trigger: ATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAACTGGGAGCCAGGTTTaGTGGGCGAAAGGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKTGSQV*WAKGFL
Trigger: CAGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGT...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp TATGTTTCCGATGATATAAACATTGGAAGGCACAGTGGTAACATTGTAGCATTCGGAGGAAGGATAGCCTaGCGAGTCCCTGTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: YVSDDINIGRHSGNIVAFGGRIA*RVPVVV
Trigger: GACTACAACAGGGACTCGCCAGGCTATCCTTCCTCC...GAATGCTACAATGTTACCACTGTGCCTTCCAATGTTTATATCATCGGAAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGTAGCTGCTGGACTGTaGGATATGAGAAGAATTGCC +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLVAAGL*DMRRIA
Trigger: GGCAATTCTTCTCATATCCCACAGTCCAGCAGCTAC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGTAGCTGCTGGACTGTaGGATATGAGAAGAATTGCC +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDVAAGL*DMRRIA
Trigger: GGCAATTCTTCTCATATCCCACAGTCCAGCAGCTAC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGCTCAAACGTTCATGTaGATGCAGGCTACAGTAGCT +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLAQTFM*MQATVA
Trigger: AGCTACTGTAGCCTGCATCCACATGAACGTTTGAGC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGCTCAAACGTTCATGTaGATGCAGGCTACAGTAGCT +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDAQTFM*MQATVA
Trigger: AGCTACTGTAGCCTGCATCCACATGAACGTTTGAGC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACACACTACGATGGAACGTaGACATCGGAGGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITHYDGT*TSEEDW
Trigger: CCAGTCTTCCTCCGATGTCCACGTTCCATCGTAGTG...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCACTACGATGGAACGTaGACATCGGAGGAAGACTGG +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLHYDGT*TSEEDW
Trigger: CCAGTCTTCCTCCGATGTCCACGTTCCATCGTAGTG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGACCGGAACCTGGTTTaGCAGGAGAGAATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKDRNLV*QERMAA
Trigger: GGCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGTAAGGGTCTTGGGGTaGGTTCAAGTCAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLVRVLG*VQVRGS
Trigger: ACTTCCCCTGACTTGAACCCACCCCAAGACCCTTAC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAGTAAGGGTCTTGGGGTaGGTTCAAGTCAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITVRVLG*VQVRGS
Trigger: ACTTCCCCTGACTTGAACCCACCCCAAGACCCTTAC...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAGCTCACGGGCATTATTaGCCATCCTCCGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITAHGHY*PSSVPS
Trigger: AGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGC...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGCTCACGGGCATTATTaGCCATCCTCCGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLAHGHY*PSSVPS
Trigger: AGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp TATGTTTCCGATGATATAAACATTGGAAGGCACAGTGGTAACATTGTAGCATTCATGACAGCCACGGCCTaGTGGAGAATCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: YVSDDINIGRHSGNIVAFMTATA*WRIRSL
Trigger: CAAGCTCCTGATTCTCCACCAGGCCGTGGCTGTCAT...GAATGCTACAATGTTACCACTGTGCCTTCCAATGTTTATATCATCGGAAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
3UTR CAA 72 bp TATGCTTCCAGTCAGCCGGCAGACTACATGTTGTGCTaGTTTATGCTGAATGGTTTCCTTCCTGACTTAAGT +
Preference number: 4 (lower is better)
Translates to: YASSQPADYMLC*FMLNGFLPDLS
Trigger: ACTTAAGTCAGGAAGGAAACCATTCAGCATAAACAAGCACAACATGTAGTCTGCCGGCTGACTGGAAGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp TATGTTTCCGATGATATAAACATTGGAAGGCACAGTGGTAACATTGTAGCATTCAGTTCCCCAGGACCCTaGGCTACTTCTGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: YVSDDINIGRHSGNIVAFSSPGP*ATSVFY
Trigger: GTAGAAGACAGAAGTAGCTCAGGGTCCTGGGGAACT...GAATGCTACAATGTTACCACTGTGCCTTCCAATGTTTATATCATCGGAAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGCGGGCATTATTGCTTaGATACTGATAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLAGIIA*ILIVLG
Trigger: TCCCAGTACTATCAGTATTCAAGCAATAATGCCCGC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGCGGGCATTATTGCTTaGATACTGATAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDAGIIA*ILIVLG
Trigger: TCCCAGTACTATCAGTATTCAAGCAATAATGCCCGC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCTGGACTGTGGGATATaGGAAGAATTGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLLDCGI*EELPSI
Trigger: GATGCTGGGCAATTCTTCTCATATCCCACAGTCCAG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACACTGGACTGTGGGATATaGGAAGAATTGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITLDCGI*EELPSI
Trigger: GATGCTGGGCAATTCTTCTCATATCCCACAGTCCAG...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACATGGTTCCGGAGAACATaGATCGCATCGTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITWFRRT*IASSSL
Trigger: AAGACTGGACGATGCGATTCATGTTCTCCGGAACCA...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTGGTTCCGGAGAACATaGATCGCATCGTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLWFRRT*IASSSL
Trigger: AAGACTGGACGATGCGATTCATGTTCTCCGGAACCA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAACACATCTGTCCCATGTaGTTCGCTGCGTCTCCCATC +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKHICPM*FAASPI
Trigger: GATGGGAGACGCAGCGAATCACATGGGACAGATGTG...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGAAAGGGTTCCTGGATTaGCCATATCCATGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLKGFLD*PYPCPL
Trigger: GAGGGGACATGGATATGGGCAATCCAGGAACCCTTT...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
CDS-3UTR GCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAAGCTCCAAGGGTCGCTaGTGTGATGGCCATCTTGCA +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKSSKGR*CDGHLA
Trigger: TGCAAGATGGCCATCACAGCAGCGACCCTTGGAGCT...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGTGTGCAGGAAGAGGTaGTGTAATGGTTTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLVCRKR*CNGLCH
Trigger: GTGGCACAAACCATTACAGCACCTCTTCCTGCACAC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAACGTTGGCAGGGGGTGTaGAGGAAGAGGTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKRWQGV*RKRCCN
Trigger: ATTACAGCACCTCTTCCTGCACACCCCCTGCCAACG...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCCCAGTTCCTCTGTTTaGCATTATACTGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDPSSSV*HYTVCS
Trigger: GGAACAGACAGTATAATGGCAAACAGAGGAACTGGG...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCCCAGTTCCTCTGTTTaGCATTATACTGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLPSSSV*HYTVCS
Trigger: GGAACAGACAGTATAATGGCAAACAGAGGAACTGGG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACATCTTCGATTCGGCTTTaGAGTGAGTGCAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITSSIRL*SECKGP
Trigger: AGGACCCTTGCACTCACTGCAAAGCCGAATCGAAGA...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTCTTCGATTCGGCTTTaGAGTGAGTGCAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLSSIRL*SECKGP
Trigger: AGGACCCTTGCACTCACTGCAAAGCCGAATCGAAGA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCTTTCTCGAACTTGCTaGTCCAGGCTGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLLSRTC*SRLRMT
Trigger: TGTCATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACACTTTCTCGAACTTGCTaGTCCAGGCTGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITLSRTC*SRLRMT
Trigger: TGTCATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAG...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACACTCGCCAAAGAAGTTaGTCCATTTTTCCCACTGCT +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDTRQRS*SIFPTA
Trigger: AGCAGTGGGAAAAATGGACCAACTTCTTTGGCGAGT...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTTGTCTGTACCTCCATaGCACTACTGTGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLLSVPP*HYCEEA
Trigger: GGCCTCTTCACAGTAGTGCCATGGAGGTACAGACAA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGGAGGAAGGATAGCCTaGCGAGTCCCTGTTGTAGTC +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKGGRIA*RVPVVV
Trigger: GACTACAACAGGGACTCGCCAGGCTATCCTTCCTCC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGAAAGTGCTGGCTGCTaGCTTGGAGGAAGGATAGCC +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKESAGC*LGGRIA
Trigger: GGCTATCCTTCCTCCAAGCCAGCAGCCAGCACTTTC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGGCTACAGTAGCTGCTaGACTGTGGGATATGAGAAG +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLGYSSC*TVGYEK
Trigger: CTTCTCATATCCCACAGTCCAGCAGCTACTGTAGCC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAGGCTACAGTAGCTGCTaGACTGTGGGATATGAGAAG +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITGYSSC*TVGYEK
Trigger: CTTCTCATATCCCACAGTCCAGCAGCTACTGTAGCC...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp GAAACACTAGCTGACGTGAATACCAACAAAAACGTTCATGTCGTTTTCTTCAGATTTGTGCCACTACGATaGAACGTGGACATCGGAGGA +
Preference number: 4 (lower is better)
Translates to: ETLADVNTNKNVHVVFFRFVPLR*NVDIGG
Trigger: TCCTCCGATGTCCACGTTCCATCGTAGTGGCACAAA...TCTGAAGAAAACGACATGAACGTTTTTGTTGGTATTCACGTCAGCTAGTGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTTTGTGCCACTACGATaGAACGTGGACATCGGAGGA +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLFVPLR*NVDIGG
Trigger: TCCTCCGATGTCCACGTTCCATCGTAGTGGCACAAA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACATTTGTGCCACTACGATaGAACGTGGACATCGGAGGA +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITFVPLR*NVDIGG
Trigger: TCCTCCGATGTCCACGTTCCATCGTAGTGGCACAAA...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGAGGGTCCTTCATAATTaGGAGATGACGAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLRVLHN*EMTRPV
Trigger: GACAGGCCTCGTCATCTCCCAATTATGAAGGACCCT...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAGGGTCCTTCATAATTaGGAGATGACGAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITRVLHN*EMTRPV
Trigger: GACAGGCCTCGTCATCTCCCAATTATGAAGGACCCT...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAATTTGGCAGGAGAGAATaGCTGCCTCTCAGAGCCACG +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKFGRRE*LPLRAT
Trigger: CGTGGCTCTGAGAGGCAGCCATTCTCTCCTGCCAAA...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp ATATATATTTGTCATAGGTCTATAACATCCATCTGTCCCTCCTACCCTAAGGAAGCTCACGGGCATTATTaGCCATCCTCCGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: IYICHRSITSICPSYPKEAHGHY*PSSVPS
Trigger: AGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGC...TTCCTTAGGGTAGGAGGGACAGATGGATGTTATAGACCTATGACAAATATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAATTGTCGCTCTTCAGGTaGAGCTGCACCATACGGCCA +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKLSLFR*SCTIRP
Trigger: TGGCCGTATGGTGCAGCTCCACCTGAAGAGCGACAA...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAATGACAGCCACGGCCTaGTGGAGAATCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKMTATA*WRIRSL
Trigger: CAAGCTCCTGATTCTCCACCAGGCCGTGGCTGTCAT...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
3UTR CAA 72 bp ATGCTGAATGGTTTCCTTCCTGACTTAAGTTCCGTTTaGGACACAGACCATATTCTGCCTGTTGGATGCAAA +
Preference number: 4 (lower is better)
Translates to: MLNGFLPDLSSV*DTDHILPVGCK
Trigger: TTTGCATCCAACAGGCAGAATATGGTCTGTGTCCAAAACGGAACTTAAGTCAGGAAGGAAACCATTCAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGCGAAAACATCGCACTaGAATCCAGTAAATCACTCA +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDAKTSH*NPVNHS
Trigger: TGAGTGATTTACTGGATTTCAGTGCGATGTTTTCGC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202116.4
ENSMUST00000202610.4
ENSMUST00000202772.4
CDS-3UTR TCA 90 bp ATATATATTTGTCATAGGTCTATAACATCCATCTGTCCCTCCTACCCTAAGGAACATCACTTGAGCCAGTaGAATGTCCACTCGCCAAAG +
Preference number: 4 (lower is better)
Translates to: IYICHRSITSICPSYPKEHHLSQ*NVHSPK
Trigger: CTTTGGCGAGTGGACATTTCACTGGCTCAAGTGATG...TTCCTTAGGGTAGGAGGGACAGATGGATGTTATAGACCTATGACAAATATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066717.12
CDS-3UTR TCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAAGTTCCCCAGGACCCTaGGCTACTTCTGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKSSPGP*ATSVFY
Trigger: GTAGAAGACAGAAGTAGCTCAGGGTCCTGGGGAACT...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202674.4
CDS-3UTR TCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAGAGAGATTGTCATGTaGCCCAAGATCCCTGCTAGT +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITREIVM*PKIPAS
Trigger: ACTAGCAGGGATCTTGGGTCACATGACAATCTCTCT...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
CDS-3UTR TCA 90 bp CAAGTCAAATACACAGGTGTGTGGGTTAATCTAGCACATTTGCAAAACCCATTAAGAGAGATTGTCATGTaGCCCAAGATCCCTGCTAGT +
Preference number: 4 (lower is better)
Translates to: QVKYTGVWVNLAHLQNPLREIVM*PKIPAS
Trigger: ACTAGCAGGGATCTTGGGTCACATGACAATCTCTCT...TAATGGGTTTTGCAAATGTGCTAGATTAACCCACACACCTGTGTATTTGACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR TCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGAGAGAGATTGTCATGTaGCCCAAGATCCCTGCTAGT +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLREIVM*PKIPAS
Trigger: ACTAGCAGGGATCTTGGGTCACATGACAATCTCTCT...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR TCA 90 bp TTCCAAAAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCTTTGTATTCTGGAATTaGCAAAAGGTGGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: FQKKFRHKCIAPQCGRIAFVFWN*QKVERD
Trigger: ATCTCTCTCCACCTTTTGTCAATTCCAGAATACAAA...GGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTTTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR TCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGGAGCCCACAGGAGTTaGAGGATTGGAGGAAAAGCT +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKGAHRS*RIGGKA
Trigger: AGCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTTCATAATTGGGAGATaGCGAGGCCTGTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLFIIGR*RGLSSI
Trigger: AATGGAGGACAGGCCTCGTCATCTCCCAATTATGAA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACATTCATAATTGGGAGATaGCGAGGCCTGTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITFIIGR*RGLSSI
Trigger: AATGGAGGACAGGCCTCGTCATCTCCCAATTATGAA...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACACTACATTTGAGCCAGTaGAATGTCCACTCGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITLHLSQ*NVHSPK
Trigger: CTTTGGCGAGTGGACATTTCACTGGCTCAAATGTAG...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202674.4
CDS-3UTR TCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCTACATTTGAGCCAGTaGAATGTCCACTCGCCAAAG +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLLHLSQ*NVHSPK
Trigger: CTTTGGCGAGTGGACATTTCACTGGCTCAAATGTAG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR TCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTCTGTCTTCTACATTTaGGCCAGTGAAATGTCCACT +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDSVFYI*ASEMST
Trigger: AGTGGACATTTCACTGGCTCAAATGTAGAAGACAGA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR TCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTCTGTCTTCTACATTTaGGCCAGTGAAATGTCCACT +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLSVFYI*ASEMST
Trigger: AGTGGACATTTCACTGGCTCAAATGTAGAAGACAGA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR GCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTCCGGCGGGCATTATTaGTTGAATACTGATAGTACT +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDSGGHY*LNTDST
Trigger: AGTACTATCAGTATTCAAGCAATAATGCCCGCCGGA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTCCGGCGGGCATTATTaGTTGAATACTGATAGTACT +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLSGGHY*LNTDST
Trigger: AGTACTATCAGTATTCAAGCAATAATGCCCGCCGGA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAATGTTGTAGTCGGCAGTaGTGGCTGAAGGAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKCCSRQ*WLKERR
Trigger: TCTACGCTCCTTCAGCCAGCACTGCCGACTACAACA...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAAGGGAAAGTGCTGGCTaGTGGCTTGGAGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKRESAG*WLGGRI
Trigger: TATCCTTCCTCCAAGCCAGCAGCCAGCACTTTCCCT...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGCAGGCTACAGTAGCTaGTGGACTGTGGGATATGAG +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKAGYSS*WTVGYE
Trigger: CTCATATCCCACAGTCCAGCAGCTACTGTAGCCTGC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTGCTGTAATGGTTTGTaGCACTACGATGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLCCNGL*HYDGTW
Trigger: CCACGTTCCATCGTAGTGGCACAAACCATTACAGCA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACATGCTGTAATGGTTTGTaGCACTACGATGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITCCNGL*HYDGTW
Trigger: CCACGTTCCATCGTAGTGGCACAAACCATTACAGCA...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp TATGTTTCCGATGATATAAACATTGGAAGGCACAGTGGTAACATTGTAGCATTCGTGTGCAGGAAGAGGTaGTGTAATGGTTTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: YVSDDINIGRHSGNIVAFVCRKR*CNGLCH
Trigger: GTGGCACAAACCATTACAGCACCTCTTCCTGCACAC...GAATGCTACAATGTTACCACTGTGCCTTCCAATGTTTATATCATCGGAAACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAACAAGTCAGGGGAAGTTaGAGACTGGACCGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKQVRGS*RLDRKL
Trigger: CAACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTG...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGAAGATTTTGTGTCTTaGAGGTTCTCATCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLEDFVS*RFSSPS
Trigger: CGAGGGCGATGAGAACCTGCAAGACACAAAATCTTC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAGAAGATTTTGTGTCTTaGAGGTTCTCATCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITEDFVS*RFSSPS
Trigger: CGAGGGCGATGAGAACCTGCAAGACACAAAATCTTC...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGGGCGAAAGGGTTCCTaGATTGCCCATATCCATGTC +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKGRKGS*IAHIHV
Trigger: GACATGGATATGGGCAATCCAGGAACCCTTTCGCCC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAGTAGCTGCTGGACTGTaGGATATGAGAAGAATTGCC +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITVAAGL*DMRRIA
Trigger: GGCAATTCTTCTCATATCCCACAGTCCAGCAGCTAC...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGTAGCTGCTGGACTGTaGGATATGAGAAGAATTGCC +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLVAAGL*DMRRIA
Trigger: GGCAATTCTTCTCATATCCCACAGTCCAGCAGCTAC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAGCTCAAACGTTCATGTaGATGCAGGCTACAGTAGCT +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITAQTFM*MQATVA
Trigger: AGCTACTGTAGCCTGCATCCACATGAACGTTTGAGC...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGCTCAAACGTTCATGTaGATGCAGGCTACAGTAGCT +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLAQTFM*MQATVA
Trigger: AGCTACTGTAGCCTGCATCCACATGAACGTTTGAGC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp CTATACGCTTCTCCTGAATGTGATCGGACGATACCTGTTTCCTATATAATAATAAGGGTCCTTCATAATTaGGAGATGACGAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LYASPECDRTIPVSYIIIRVLHN*EMTRPV
Trigger: GACAGGCCTCGTCATCTCCCAATTATGAAGGACCCT...TATTATTATATAGGAAACAGGTATCGTCCGATCACATTCAGGAGAAGCGTATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR CCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGTAAGGGTCTTGGGGTaGGTTCAAGTCAGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKVRVLG*VQVRGS
Trigger: ACTTCCCCTGACTTGAACCCACCCCAAGACCCTTAC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGCTCACGGGCATTATTaGCCATCCTCCGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKAHGHY*PSSVPS
Trigger: AGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
3UTR CAA 72 bp CTATGTGTTCACTGCACTACACACCAAAGTCCATTGTaGGAAAGACTTACGATGGGAATTGGTTCAATTGTG +
Preference number: 4 (lower is better)
Translates to: LCVHCTTHQSPL*ERLTMGIGSIV
Trigger: CACAATTGAACCAATTCCCATCGTAAGTCTTTCCAACAATGGACTTTGGTGTGTAGTGCAGTGAACACATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR CAA 72 bp GTCCTATGTGTTCACTGCACTACACACCAAAGTCCATaGTTGGAAAGACTTACGATGGGAATTGGTTCAATT +
Preference number: 4 (lower is better)
Translates to: VLCVHCTTHQSP*LERLTMGIGSI
Trigger: AATTGAACCAATTCCCATCGTAAGTCTTTCCAACAATGGACTTTGGTGTGTAGTGCAGTGAACACATAGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR CAA 72 bp TGTGATCGGACGATACCTGTTTCCTATATAATAATATaGTTCCTAGGGATACCCGCCTTGGCAGACTATACA +
Preference number: 4 (lower is better)
Translates to: CDRTIPVSYIII*FLGIPALADYT
Trigger: TGTATAGTCTGCCAAGGCGGGTATCCCTAGGAACAATATTATTATATAGGAAACAGGTATCGTCCGATCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
3UTR CAA 72 bp TTAATTAGTTACTCCTCTAGACAGCTTTCTGTGTGCTaGCAAGCATCCTGTTCCATTTTCATTAAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LISYSSRQLSVC*QASCSIFIKGA
Trigger: TGCCCCCTTAATGAAAATGGAACAGGATGCTTGCAAGCACACAGAAAGCTGTCTAGAGGAGTAACTAATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp AGCCTCACTTTTGCAAACAGTGACCACCTTTGCAGCTCTTATTCATCAACCTCTTTTGTATTCTGGAATTaGCAAAAGGTGGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: SLTFANSDHLCSSYSSTSFVFWN*QKVERD
Trigger: ATCTCTCTCCACCTTTTGTCAATTCCAGAATACAAA...AGAGGTTGATGAATAAGAGCTGCAAAGGTGGTCACTGTTTGCAAAAGTGAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR TCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGCGGGCATTATTGCTTaGATACTGATAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLAGIIA*ILIVLG
Trigger: TCCCAGTACTATCAGTATTCAAGCAATAATGCCCGC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAACTGGACTGTGGGATATaGGAAGAATTGCCCAGCATC +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKLDCGI*EELPSI
Trigger: GATGCTGGGCAATTCTTCTCATATCCCACAGTCCAG...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp CTATACGCTTCTCCTGAATGTGATCGGACGATACCTGTTTCCTATATAATAATATTCATAATTGGGAGATaGCGAGGCCTGTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: LYASPECDRTIPVSYIIIFIIGR*RGLSSI
Trigger: AATGGAGGACAGGCCTCGTCATCTCCCAATTATGAA...TATTATTATATAGGAAACAGGTATCGTCCGATCACATTCAGGAGAAGCGTATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp ATATATATTTGTCATAGGTCTATAACATCCATCTGTCCCTCCTACCCTAAGGAATTCATAATTGGGAGATaGCGAGGCCTGTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: IYICHRSITSICPSYPKEFIIGR*RGLSSI
Trigger: AATGGAGGACAGGCCTCGTCATCTCCCAATTATGAA...TTCCTTAGGGTAGGAGGGACAGATGGATGTTATAGACCTATGACAAATATATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAATGGTTCCGGAGAACATaGATCGCATCGTCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKWFRRT*IASSSL
Trigger: AAGACTGGACGATGCGATTCATGTTCTCCGGAACCA...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp CTATACGCTTCTCCTGAATGTGATCGGACGATACCTGTTTCCTATATAATAATATGCTGTAATGGTTTGTaGCACTACGATGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: LYASPECDRTIPVSYIIICCNGL*HYDGTW
Trigger: CCACGTTCCATCGTAGTGGCACAAACCATTACAGCA...TATTATTATATAGGAAACAGGTATCGTCCGATCACATTCAGGAGAAGCGTATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR GCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGTGTGCAGGAAGAGGTaGTGTAATGGTTTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKVCRKR*CNGLCH
Trigger: GTGGCACAAACCATTACAGCACCTCTTCCTGCACAC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCCCAGTTCCTCTGTTTaGCATTATACTGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLPSSSV*HYTVCS
Trigger: GGAACAGACAGTATAATGGCAAACAGAGGAACTGGG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAATCTTCGATTCGGCTTTaGAGTGAGTGCAAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKSSIRL*SECKGP
Trigger: AGGACCCTTGCACTCACTGCAAAGCCGAATCGAAGA...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAACTTTCTCGAACTTGCTaGTCCAGGCTGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKLSRTC*SRLRMT
Trigger: TGTCATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAG...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAATTGTCTGTACCTCCATaGCACTACTGTGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKLSVPP*HYCEEA
Trigger: GGCCTCTTCACAGTAGTGCCATGGAGGTACAGACAA...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGGCTACAGTAGCTGCTaGACTGTGGGATATGAGAAG +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKGYSSC*TVGYEK
Trigger: CTTCTCATATCCCACAGTCCAGCAGCTACTGTAGCC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAATTTGTGCCACTACGATaGAACGTGGACATCGGAGGA +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKFVPLR*NVDIGG
Trigger: TCCTCCGATGTCCACGTTCCATCGTAGTGGCACAAA...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp GAAACACTAGCTGACGTGAATACCAACAAAAACGTTCATGTCGTTTTCTTCAGAGCGAAAACATCGCACTaGAATCCAGTAAATCACTCA +
Preference number: 4 (lower is better)
Translates to: ETLADVNTNKNVHVVFFRAKTSH*NPVNHS
Trigger: TGAGTGATTTACTGGATTTCAGTGCGATGTTTTCGC...TCTGAAGAAAACGACATGAACGTTTTTGTTGGTATTCACGTCAGCTAGTGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGCGAAAACATCGCACTaGAATCCAGTAAATCACTCA +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLAKTSH*NPVNHS
Trigger: TGAGTGATTTACTGGATTTCAGTGCGATGTTTTCGC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202116.4
ENSMUST00000202610.4
ENSMUST00000202772.4
CDS-3UTR TCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAAGAGAGATTGTCATGTaGCCCAAGATCCCTGCTAGT +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKREIVM*PKIPAS
Trigger: ACTAGCAGGGATCTTGGGTCACATGACAATCTCTCT...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
CDS-3UTR TCA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTTTGTATTCTGGAATTaGCAAAAGGTGGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDFVFWN*QKVERD
Trigger: ATCTCTCTCCACCTTTTGTCAATTCCAGAATACAAA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR TCA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTTTGTATTCTGGAATTaGCAAAAGGTGGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLFVFWN*QKVERD
Trigger: ATCTCTCTCCACCTTTTGTCAATTCCAGAATACAAA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR TCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAATTCATAATTGGGAGATaGCGAGGCCTGTCCTCCATT +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKFIIGR*RGLSSI
Trigger: AATGGAGGACAGGCCTCGTCATCTCCCAATTATGAA...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACATCTGTCTTCTACATTTaGGCCAGTGAAATGTCCACT +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITSVFYI*ASEMST
Trigger: AGTGGACATTTCACTGGCTCAAATGTAGAAGACAGA...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202674.4
CDS-3UTR GCA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACATCCGGCGGGCATTATTaGTTGAATACTGATAGTACT +
Preference number: 4 (lower is better)
Translates to: LKPLASAIHNYSDLSYITSGGHY*LNTDST
Trigger: AGTACTATCAGTATTCAAGCAATAATGCCCGCCGGA...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTCCGGCGGGCATTATTaGTTGAATACTGATAGTACT +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLSGGHY*LNTDST
Trigger: AGTACTATCAGTATTCAAGCAATAATGCCCGCCGGA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAATGCTGTAATGGTTTGTaGCACTACGATGGAACGTGG +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKCCNGL*HYDGTW
Trigger: CCACGTTCCATCGTAGTGGCACAAACCATTACAGCA...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGAAGATTTTGTGTCTTaGAGGTTCTCATCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKEDFVS*RFSSPS
Trigger: CGAGGGCGATGAGAACCTGCAAGACACAAAATCTTC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGCTCAAACGTTCATGTaGATGCAGGCTACAGTAGCT +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKAQTFM*MQATVA
Trigger: AGCTACTGTAGCCTGCATCCACATGAACGTTTGAGC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGCGGGCATTATTGCTTaGATACTGATAGTACTGGGA +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKAGIIA*ILIVLG
Trigger: TCCCAGTACTATCAGTATTCAAGCAATAATGCCCGC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR GCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAACCCAGTTCCTCTGTTTaGCATTATACTGTCTGTTCC +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKPSSSV*HYTVCS
Trigger: GGAACAGACAGTATAATGGCAAACAGAGGAACTGGG...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
3UTR CAA 72 bp CATCCTGTTCCATTTTCATTAAGGGGGCATCTCTTCTaGAGAAACCAAGGACTTTGCCTTTCAATTTGTTTT +
Preference number: 4 (lower is better)
Translates to: HPVPFSLRGHLF*RNQGLCLSICF
Trigger: AAAACAAATTGAAAGGCAAAGTCCTTGGTTTCTCAAGAAGAGATGCCCCCTTAATGAAAATGGAACAGGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000114985.10
CDS-3UTR TCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGCGAAAACATCGCACTaGAATCCAGTAAATCACTCA +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKAKTSH*NPVNHS
Trigger: TGAGTGATTTACTGGATTTCAGTGCGATGTTTTCGC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202116.4
CDS-3UTR TCA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTTTGTATTCTGGAATTaGCAAAAGGTGGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLFVFWN*QKVERD
Trigger: ATCTCTCTCCACCTTTTGTCAATTCCAGAATACAAA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR TCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAATCTGTCTTCTACATTTaGGCCAGTGAAATGTCCACT +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKSVFYI*ASEMST
Trigger: AGTGGACATTTCACTGGCTCAAATGTAGAAGACAGA...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202674.4
CDS-3UTR GCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAATCCGGCGGGCATTATTaGTTGAATACTGATAGTACT +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKSGGHY*LNTDST
Trigger: AGTACTATCAGTATTCAAGCAATAATGCCCGCCGGA...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR TCA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAATTTGTATTCTGGAATTaGCAAAAGGTGGAGAGAGAT +
Preference number: 4 (lower is better)
Translates to: KPLASAIHNYSDLSYITKFVFWN*QKVERD
Trigger: ATCTCTCTCCACCTTTTGTCAATTCCAGAATACAAA...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
3UTR CAA 72 bp AGTAATGAATACATCAAAGCTGGTGAGAACATGAAATaGCAGCTTTTTCTCTGTCCGAGTGAGAACAAAATA +
Preference number: 4 (lower is better)
Translates to: SNEYIKAGENMK*QLFLCPSENKI
Trigger: TATTTTGTTCTCACTCGGACAGAGAAAAAGCTGCAATTTCATGTTCTCACCAGCTTTGATGTATTCATTACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS GCA 90 bp CCCAGGCTACCCATCGCTCCGTTGTGGGAGGGTCCCATGATCCCATaGATGTCCCCATGGCCACCAGGCACAGCTGTGGACGGGCCCACT +
Preference number: 5 (lower is better)
Translates to: PRLPIAPLWEGPMIP*MSPWPPGTAVDGPT
Trigger: AGTGGGCCCGTCCACAGCTGTGCCTGGTGGCCATGGGGACATGCATGGGATCATGGGACCCTCCCACAACGGAGCGATGGGTAGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 25 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000200862.4
ENSMUST00000201037.4
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS CCA 90 bp ATCGCTCCGTTGTGGGAGGGTCCCATGATCCCATGCATGTCCCCATaGCCACCAGGCACAGCTGTGGACGGGCCCACTGCGTGGTTCCGG +
Preference number: 5 (lower is better)
Translates to: IAPLWEGPMIPCMSP*PPGTAVDGPTAWFR
Trigger: CCGGAACCACGCAGTGGGCCCGTCCACAGCTGTGCCTGGTGGCCATGGGGACATGCATGGGATCATGGGACCCTCCCACAACGGAGCGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 26 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000200862.4
ENSMUST00000201037.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS CCA 90 bp AGACTAGTTCCGTACCCTGAGCCCAGGCTACCCATCGCTCCGTTGTaGGAGGGTCCCATGATCCCATGCATGTCCCCATGGCCACCAGGC +
Preference number: 5 (lower is better)
Translates to: RLVPYPEPRLPIAPL*EGPMIPCMSPWPPG
Trigger: GCCTGGTGGCCATGGGGACATGCATGGGATCATGGGACCCTCCCACAACGGAGCGATGGGTAGCCTGGGCTCAGGGTACGGAACTAGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 25 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000200862.4
ENSMUST00000201037.4
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS CCA 90 bp TGGACCGGAAGTTGTGGGACCGGAACCTGGTTTGGCAGGAGAGAATaGCTGCCTCTCAGAGCCACGCCATCTTCACGGTGGGCCCCAACC +
Preference number: 5 (lower is better)
Translates to: WTGSCGTGTWFGRRE*LPLRATPSSRWAPT
Trigger: GGTTGGGGCCCACCGTGAAGATGGCGTGGCTCTGAGAGGCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTCCCACAACTTCCGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS CCA 90 bp CTGGCCCTGGAGGCCTGGTGGCATCCCTCTGTAAGGGTCTTGGGGTaGGTTCAAGTCAGGGGAAGTTGCAGACTGGACCGGAAGTTGTGG +
Preference number: 5 (lower is better)
Translates to: LALEAWWHPSVRVLG*VQVRGSCRLDRKLW
Trigger: CCACAACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTGAACCCACCCCAAGACCCTTACAGAGGGATGCCACCAGGCCTCCAGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 23 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS TCA 90 bp GGAAGGATAGCCTGGCGAGTCCCTGTTGTAGTCGGCAGTGCTGGCTaGAGGAGCGTAGACCTCTGCTCTCCCTTCGTGGTCCACGAGACA +
Preference number: 5 (lower is better)
Translates to: GRIAWRVPVVVGSAG*RSVDLCSPFVVHET
Trigger: TGTCTCGTGGACCACGAAGGGAGAGCAGAGGTCTACGCTCCTTCAGCCAGCACTGCCGACTACAACAGGGACTCGCCAGGCTATCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202474.4
CDS GCA 90 bp GCTTGGAGGAAGGATAGCCTGGCGAGTCCCTGTTGTAGTCGGCAGTaGTGGCTGAAGGAGCGTAGACCTCTGCTCTCCCTTCGTGGTCCA +
Preference number: 5 (lower is better)
Translates to: AWRKDSLASPCCSRQ*WLKERRPLLSLRGP
Trigger: TGGACCACGAAGGGAGAGCAGAGGTCTACGCTCCTTCAGCCAGCACTGCCGACTACAACAGGGACTCGCCAGGCTATCCTTCCTCCAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202474.4
CDS CCA 90 bp TGGAGGAAGGATAGCCTGGCGAGTCCCTGTTGTAGTCGGCAGTGCTaGCTGAAGGAGCGTAGACCTCTGCTCTCCCTTCGTGGTCCACGA +
Preference number: 5 (lower is better)
Translates to: WRKDSLASPCCSRQC*LKERRPLLSLRGPR
Trigger: TCGTGGACCACGAAGGGAGAGCAGAGGTCTACGCTCCTTCAGCCAGCACTGCCGACTACAACAGGGACTCGCCAGGCTATCCTTCCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202474.4
CDS-3UTR CAA 90 bp TCTCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTCTCGGGAGGAAGACTGGAGTaGATGTCTGCCGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: SRTLRRSRALLAILRSFSGGRLE*MSAEEW
Trigger: CCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCC...CGAGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR CAA 90 bp GGTCAGCATTTCGTCCTGCACTGCCCCTCCGGAAGCAGAGTTGGCACTACAGGTCTACCCATCGCTCCGTaGTGGGAGGGTCCCATGATC +
Preference number: 5 (lower is better)
Translates to: GQHFVLHCPSGSRVGTTGLPIAP*WEGPMI
Trigger: GATCATGGGACCCTCCCACAACGGAGCGATGGGTAG...ACCTGTAGTGCCAACTCTGCTTCCGGAGGGGCAGTGCAGGACGAAATGCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS GCA 90 bp GCTTGGAGGAAGGATAGCCTGGCGAGTCCCTGTTGTAGTCGGCAGTaGTGGCTGAAGGAGCGTAGACTGAAGACGGCAAACCCGGAGGAA +
Preference number: 5 (lower is better)
Translates to: AWRKDSLASPCCSRQ*WLKERRLKTANPEE
Trigger: TTCCTCCGGGTTTGCCGTCTTCAGTCTACGCTCCTTCAGCCAGCACTGCCGACTACAACAGGGACTCGCCAGGCTATCCTTCCTCCAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 30 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000200813.4
ENSMUST00000200862.4
ENSMUST00000200966.4
ENSMUST00000201094.4
ENSMUST00000201124.4
ENSMUST00000201181.4
ENSMUST00000201205.4
ENSMUST00000201235.4
ENSMUST00000201288.4
ENSMUST00000201410.4
ENSMUST00000201627.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202350.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202477.4
ENSMUST00000202674.4
ENSMUST00000202765.4
ENSMUST00000202937.4
ENSMUST00000207214.2
ENSMUST00000209174.2
CDS GCA 90 bp ATGCATGTCCCCATGGCCACCAGGCACAGCTGTGGACGGGCCCACTaGGTGGTTCCGGAGAACATGAATCGCATCGTCCAGTCTTTCCAA +
Preference number: 5 (lower is better)
Translates to: MHVPMATRHSCGRAH*VVPENMNRIVQSFQ
Trigger: TTGGAAAGACTGGACGATGCGATTCATGTTCTCCGGAACCACGCAGTGGGCCCGTCCACAGCTGTGCCTGGTGGCCATGGGGACATGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 26 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000200862.4
ENSMUST00000201037.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACAGTTCCTGGACGGGCTaGGATGGCCTCCAGTTCCCC +
Preference number: 5 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHSSWTG*DGLQFP
Trigger: GGGGAACTGGAGGCCATCCAAGCCCGTCCAGGAACT...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp GGTCAGCATTTCGTCCTGCACTGCCCCTCCGGAAGCAGAGTTGGCACTACAGGTGGAGGAAGACTGGAGTaGATGTCTGCCGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: GQHFVLHCPSGSRVGTTGGGRLE*MSAEEW
Trigger: CCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCC...ACCTGTAGTGCCAACTCTGCTTCCGGAGGGGCAGTGCAGGACGAAATGCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp TCTCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTCTCGATACTGTCTGTTCCGTaGGCAGGGGGTGTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: SRTLRRSRALLAILRSFSILSVP*AGGVQE
Trigger: TTCCTGCACACCCCCTGCCAACGGAACAGACAGTAT...CGAGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR CAA 90 bp TCTCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTCTCGGGGAGCCCACAGGAGTaGAAGGATTGGAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: SRTLRRSRALLAILRSFSGSPQE*KDWRKS
Trigger: GCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCCC...CGAGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS GCA 90 bp GATAGTACTGGGAGCCAGGTTTGGTGGGCGAAAGGGTTCCTGGATTaGCCATATCCATGTCCCCTCCGAGGAGACTCTGCTGGTGGCAAC +
Preference number: 5 (lower is better)
Translates to: DSTGSQVWWAKGFLD*PYPCPLRGDSAGGN
Trigger: GTTGCCACCAGCAGAGTCTCCTCGGAGGGGACATGGATATGGGCAATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGTACTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000128706.8
ENSMUST00000201124.4
ENSMUST00000201235.4
ENSMUST00000201288.4
ENSMUST00000201299.4
ENSMUST00000201537.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS GCA 90 bp CATCCCTCTGTAAGGGTCTTGGGGTGGGTTCAAGTCAGGGGAAGTTaGAGACTGGACCGGAAGTTGTGGGACCGGAACCTGGTTTGGCAG +
Preference number: 5 (lower is better)
Translates to: HPSVRVLGWVQVRGS*RLDRKLWDRNLVWQ
Trigger: CTGCCAAACCAGGTTCCGGTCCCACAACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTGAACCCACCCCAAGACCCTTACAGAGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 23 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS GCA 90 bp GCTTGGAGGAAGGATAGCCTGGCGAGTCCCTGTTGTAGTCGGCAGTaGTGGCTGAAGGAGCGTAGACCTGGTGGCAACCCTGAACGTTTT +
Preference number: 5 (lower is better)
Translates to: AWRKDSLASPCCSRQ*WLKERRPGGNPERF
Trigger: AAAACGTTCAGGGTTGCCACCAGGTCTACGCTCCTTCAGCCAGCACTGCCGACTACAACAGGGACTCGCCAGGCTATCCTTCCTCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000202610.4
ENSMUST00000202772.4
CDS CCA 90 bp TGGAGGAAGGATAGCCTGGCGAGTCCCTGTTGTAGTCGGCAGTGCTaGCTGAAGGAGCGTAGACTGAAGACGGCAAACCCGGAGGAACTT +
Preference number: 5 (lower is better)
Translates to: WRKDSLASPCCSRQC*LKERRLKTANPEEL
Trigger: AAGTTCCTCCGGGTTTGCCGTCTTCAGTCTACGCTCCTTCAGCCAGCACTGCCGACTACAACAGGGACTCGCCAGGCTATCCTTCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 30 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000200813.4
ENSMUST00000200862.4
ENSMUST00000200966.4
ENSMUST00000201094.4
ENSMUST00000201124.4
ENSMUST00000201181.4
ENSMUST00000201205.4
ENSMUST00000201235.4
ENSMUST00000201288.4
ENSMUST00000201410.4
ENSMUST00000201627.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202350.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202477.4
ENSMUST00000202674.4
ENSMUST00000202765.4
ENSMUST00000202937.4
ENSMUST00000207214.2
ENSMUST00000209174.2
CDS CCA 90 bp TGGAGGAAGGATAGCCTGGCGAGTCCCTGTTGTAGTCGGCAGTGCTaGCTGAAGGAGCGTAGACCTGGTGGCAACCCTGAACGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: WRKDSLASPCCSRQC*LKERRPGGNPERFL
Trigger: GAGAAAACGTTCAGGGTTGCCACCAGGTCTACGCTCCTTCAGCCAGCACTGCCGACTACAACAGGGACTCGCCAGGCTATCCTTCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000202610.4
ENSMUST00000202772.4
CDS-3UTR CAA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACAGTTCCTGGACGGGCTaGGATGGCCTCCAGTTCCCC +
Preference number: 5 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYSSWTG*DGLQFP
Trigger: GGGGAACTGGAGGCCATCCAAGCCCGTCCAGGAACT...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp TCTCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTCTCGGCTGTGATGGCCATCTaGCATGAAGAAGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: SRTLRRSRALLAILRSFSAVMAI*HEEGAR
Trigger: CCTAGCTCCTTCTTCATGCAAGATGGCCATCACAGC...CGAGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR CAA 90 bp GGTCAGCATTTCGTCCTGCACTGCCCCTCCGGAAGCAGAGTTGGCACTACAGGTATACTGTCTGTTCCGTaGGCAGGGGGTGTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: GQHFVLHCPSGSRVGTTGILSVP*AGGVQE
Trigger: TTCCTGCACACCCCCTGCCAACGGAACAGACAGTAT...ACCTGTAGTGCCAACTCTGCTTCCGGAGGGGCAGTGCAGGACGAAATGCTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACCTACCCATCGCTCCGTaGTGGGAGGGTCCCATGATC +
Preference number: 5 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHLPIAP*WEGPMI
Trigger: GATCATGGGACCCTCCCACAACGGAGCGATGGGTAG...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGGACCGGAACCTGGTTaGGCAGGAGAGAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFGPEPG*AGENGC
Trigger: GCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTCC...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCGGACCGGAACCTGGTTaGGCAGGAGAGAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRGPEPG*AGENGC
Trigger: GCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTCC...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GTACCTCTGAAAATCCCAGGGGAGGGTAACAAGGGCAGCGCCACAAGCCAGACAAGACTGGACCGGAAGTaGTGGGACCGGAACCTGGTT +
Preference number: 5 (lower is better)
Translates to: VPLKIPGEGNKGSATSQTRLDRK*WDRNLV
Trigger: AACCAGGTTCCGGTCCCACAACTTCCGGTCCAGTCT...TGTCTGGCTTGTGGCGCTGCCCTTGTTACCCTCCCCTGGGATTTTCAGAGGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS CCA 90 bp ATGGCCATCTTGCATGAAGAAGGAGCTAGGGAAAGTGCTGGCTGCTaGCTTGGAGGAAGGATAGCCTGGCGAGTCCCTGTTGTAGTCGGC +
Preference number: 5 (lower is better)
Translates to: MAILHEEGARESAGC*LGGRIAWRVPVVVG
Trigger: GCCGACTACAACAGGGACTCGCCAGGCTATCCTTCCTCCAAGCCAGCAGCCAGCACTTTCCCTAGCTCCTTCTTCATGCAAGATGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 36 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000200813.4
ENSMUST00000200862.4
ENSMUST00000200966.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201124.4
ENSMUST00000201181.4
ENSMUST00000201205.4
ENSMUST00000201288.4
ENSMUST00000201410.4
ENSMUST00000201627.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202350.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202751.4
ENSMUST00000202765.4
ENSMUST00000202772.4
ENSMUST00000202937.4
ENSMUST00000207214.2
ENSMUST00000209174.2
CDS-3UTR CAA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATAGTTCCTGGACGGGCTaGGATGGCCTCCAGTTCCCC +
Preference number: 5 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDSSWTG*DGLQFP
Trigger: GGGGAACTGGAGGCCATCCAAGCCCGTCCAGGAACT...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCGGAGGAAGACTGGAGTaGATGTCTGCCGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRGGRLE*MSAEEW
Trigger: CCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCC...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGGAGGAAGACTGGAGTaGATGTCTGCCGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFGGRLE*MSAEEW
Trigger: CCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCC...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TGCTGCCCCAGTTCCTCTGTTTGCCATTATACTGTCTGTTCCGTTGGCAGGGGGGGAGGAAGACTGGAGTaGATGTCTGCCGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: CCPSSSVCHYTVCSVGRGGGRLE*MSAEEW
Trigger: CCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCC...CCCCCTGCCAACGGAACAGACAGTATAATGGCAAACAGAGGAACTGGGGCAGCA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
CDS-3UTR CAA 90 bp TCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTCTCGCGCCCCAGTTCCTCTGTTaGCCATTATACTGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: SDPQALTGIIGHPPFLLAPQFLC*PLYCLF
Trigger: GAACAGACAGTATAATGGCAAACAGAGGAACTGGGG...CGCGAGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR CAA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGCTACCCATCGCTCCGTaGTGGGAGGGTCCCATGATC +
Preference number: 5 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVLPIAP*WEGPMI
Trigger: GATCATGGGACCCTCCCACAACGGAGCGATGGGTAG...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCACTACCCATCGCTCCGTaGTGGGAGGGTCCCATGATC +
Preference number: 5 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSLPIAP*WEGPMI
Trigger: GATCATGGGACCCTCCCACAACGGAGCGATGGGTAG...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACTACCCATCGCTCCGTaGTGGGAGGGTCCCATGATC +
Preference number: 5 (lower is better)
Translates to: RIAIQSLGCVSACTYRFALPIAP*WEGPMI
Trigger: GATCATGGGACCCTCCCACAACGGAGCGATGGGTAG...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCAGGACCGGAACCTGGTTaGGCAGGAGAGAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: RIAIQSLGCVSACTYRFAGPEPG*AGENGC
Trigger: GCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTCC...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGGGACCGGAACCTGGTTaGGCAGGAGAGAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVGPEPG*AGENGC
Trigger: GCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTCC...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCAGACTGGACCGGAAGTaGTGGGACCGGAACCTGGTT +
Preference number: 5 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFRLDRK*WDRNLV
Trigger: AACCAGGTTCCGGTCCCACAACTTCCGGTCCAGTCT...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GGTCAGCATTTCGTCCTGCACTGCCCCTCCGGAAGCAGAGTTGGCACTACAGGTTCAAGTCAGGGGAAGTaGCAGACTGGACCGGAAGTT +
Preference number: 5 (lower is better)
Translates to: GQHFVLHCPSGSRVGTTGSSQGK*QTGPEV
Trigger: AACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTGA...ACCTGTAGTGCCAACTCTGCTTCCGGAGGGGCAGTGCAGGACGAAATGCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACCCCTCTGTAAGGGTCTaGGGGTGGGTTCAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHPSVRV*GWVQVR
Trigger: CCTGACTTGAACCCACCCCAAGACCCTTACAGAGGG...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GGTCAGCATTTCGTCCTGCACTGCCCCTCCGGAAGCAGAGTTGGCACTACAGGTCCCTCGTCGTCGGATTaGATCTCAGAGCTACCAGAA +
Preference number: 5 (lower is better)
Translates to: GQHFVLHCPSGSRVGTTGPSSSD*ISELPE
Trigger: TTCTGGTAGCTCTGAGATCAAATCCGACGACGAGGG...ACCTGTAGTGCCAACTCTGCTTCCGGAGGGGCAGTGCAGGACGAAATGCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCCGCTCACGGGCATTATaGGCCATCCTCCGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRRSRAL*AILRSF
Trigger: GAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCG...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACCGCTCACGGGCATTATaGGCCATCCTCCGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHRSRAL*AILRSF
Trigger: GAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCG...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS GCA 90 bp GTGATGGCCATCTTGCATGAAGAAGGAGCTAGGGAAAGTGCTGGCTaGTGGCTTGGAGGAAGGATAGCCTGGCGAGTCCCTGTTGTAGTC +
Preference number: 5 (lower is better)
Translates to: VMAILHEEGARESAG*WLGGRIAWRVPVVV
Trigger: GACTACAACAGGGACTCGCCAGGCTATCCTTCCTCCAAGCCAGCAGCCAGCACTTTCCCTAGCTCCTTCTTCATGCAAGATGGCCATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 35 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000200813.4
ENSMUST00000200862.4
ENSMUST00000200966.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201124.4
ENSMUST00000201181.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201627.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202350.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202751.4
ENSMUST00000202765.4
ENSMUST00000202772.4
ENSMUST00000202937.4
ENSMUST00000207214.2
ENSMUST00000209174.2
CDS CCA 90 bp ATACTGATAGTACTGGGAGCCAGGTTTGGTGGGCGAAAGGGTTCCTaGATTGCCCATATCCATGTCCCCTCCGAGGAGACTCTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: ILIVLGARFGGRKGS*IAHIHVPSEETLLV
Trigger: CACCAGCAGAGTCTCCTCGGAGGGGACATGGATATGGGCAATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGTACTATCAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000128706.8
ENSMUST00000201124.4
ENSMUST00000201235.4
ENSMUST00000201288.4
ENSMUST00000201299.4
ENSMUST00000201537.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS CCA 90 bp GCTCAAACGTTCATGTGGATGCAGGCTACAGTAGCTGCTGGACTGTaGGATATGAGAAGAATTGCCCAGCATCCCTCCGTAGCCGGGCTG +
Preference number: 5 (lower is better)
Translates to: AQTFMWMQATVAAGL*DMRRIAQHPSVAGL
Trigger: CAGCCCGGCTACGGAGGGATGCTGGGCAATTCTTCTCATATCCCACAGTCCAGCAGCTACTGTAGCCTGCATCCACATGAACGTTTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 35 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000145918.5
ENSMUST00000200703.4
ENSMUST00000200862.4
ENSMUST00000200921.4
ENSMUST00000200966.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201124.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000201964.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202350.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202751.4
ENSMUST00000202765.4
ENSMUST00000202772.4
ENSMUST00000202937.4
ENSMUST00000209174.2
CDS CCA 90 bp ATACTGATAGTACTGGGAGCCAGGTTTGGTGGGCGAAAGGGTTCCTaGATTGCCCATATCCATGTCCCCTCCGAGGAGACTCTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: ILIVLGARFGGRKGS*IAHIHVPSEETLVA
Trigger: TGCCACCAGAGTCTCCTCGGAGGGGACATGGATATGGGCAATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGTACTATCAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000202074.4
ENSMUST00000202674.4
CDS-3UTR CAA 90 bp GTACCTCTGAAAATCCCAGGGGAGGGTAACAAGGGCAGCGCCACAAGCCAGACAGAAAGGGTTCCTGGATaGCCCATATCCATGTCCCCT +
Preference number: 5 (lower is better)
Translates to: VPLKIPGEGNKGSATSQTERVPG*PISMSP
Trigger: AGGGGACATGGATATGGGCAATCCAGGAACCCTTTC...TGTCTGGCTTGTGGCGCTGCCCTTGTTACCCTCCCCTGGGATTTTCAGAGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCATACTGGGAGCCAGGTTaGGTGGGCGAAAGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSYWEPG*VGERVP
Trigger: AGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGTA...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGTACTGGGAGCCAGGTTaGGTGGGCGAAAGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVYWEPG*VGERVP
Trigger: AGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGTA...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp CATCAGCGTGCCCCCTCCTCAGCCCCAGGTATCACAGGTTCCCAGAATGCTTGGCTTTTCGGACTTTCTTaGTCTGTACCTCCATGGCAC +
Preference number: 5 (lower is better)
Translates to: HQRAPSSAPGITGSQNAWLFGLS*SVPPWH
Trigger: GTGCCATGGAGGTACAGACAAAGAAAGTCCGAAAAG...CCAAGCATTCTGGGAACCTGTGATACCTGGGGCTGAGGAGGGGGCACGCTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR CAA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATACTGTCTGTTCCGTaGGCAGGGGGTGTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHILSVP*AGGVQE
Trigger: TTCCTGCACACCCCCTGCCAACGGAACAGACAGTAT...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCATACTGTCTGTTCCGTaGGCAGGGGGTGTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFILSVP*AGGVQE
Trigger: TTCCTGCACACCCCCTGCCAACGGAACAGACAGTAT...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACGGGAGCCCACAGGAGTaGAAGGATTGGAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHGSPQE*KDWRKS
Trigger: GCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCCC...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGAGACTGGACCGGAAGTaGTGGGACCGGAACCTGGTT +
Preference number: 5 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVRLDRK*WDRNLV
Trigger: AACCAGGTTCCGGTCCCACAACTTCCGGTCCAGTCT...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACCCTCTGTAAGGGTCTaGGGGTGGGTTCAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: RIAIQSLGCVSACTYRFAPSVRV*GWVQVR
Trigger: CCTGACTTGAACCCACCCCAAGACCCTTACAGAGGG...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGCCCTCTGTAAGGGTCTaGGGGTGGGTTCAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVPSVRV*GWVQVR
Trigger: CCTGACTTGAACCCACCCCAAGACCCTTACAGAGGG...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCACGCTCACGGGCATTATaGGCCATCCTCCGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSRSRAL*AILRSF
Trigger: GAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCG...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGCGCTCACGGGCATTATaGGCCATCCTCCGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVRSRAL*AILRSF
Trigger: GAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCG...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS TCA 90 bp CTCCATGGCACTACTGTGAAGAGGCCTCCGGCGGGCATTATTGCTTaGATACTGATAGTACTGGGAGCCAGGTTTGGTGGGCGAAAGGGT +
Preference number: 5 (lower is better)
Translates to: LHGTTVKRPPAGIIA*ILIVLGARFGGRKG
Trigger: ACCCTTTCGCCCACCAAACCTGGCTCCCAGTACTATCAGTATTCAAGCAATAATGCCCGCCGGAGGCCTCTTCACAGTAGTGCCATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 34 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000128706.8
ENSMUST00000200813.4
ENSMUST00000200862.4
ENSMUST00000200966.4
ENSMUST00000201094.4
ENSMUST00000201124.4
ENSMUST00000201181.4
ENSMUST00000201205.4
ENSMUST00000201235.4
ENSMUST00000201288.4
ENSMUST00000201299.4
ENSMUST00000201410.4
ENSMUST00000201537.4
ENSMUST00000201627.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202074.4
ENSMUST00000202116.4
ENSMUST00000202350.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202477.4
ENSMUST00000202674.4
ENSMUST00000202765.4
ENSMUST00000202937.4
ENSMUST00000207214.2
ENSMUST00000209174.2
CDS GCA 90 bp CGGGCATTATTGGCCATCCTCCGTTCCTTCTCGCGCTCAGCCTTCTaGTCTGGGGTCAGGTCCTCATCATCGTTATTGCTAGATCTTGAC +
Preference number: 5 (lower is better)
Translates to: RALLAILRSFSRSAF*SGVRSSSSLLLDLD
Trigger: GTCAAGATCTAGCAATAACGATGATGAGGACCTGACCCCAGAGCAGAAGGCTGAGCGCGAGAAGGAACGGAGGATGGCCAATAATGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114985.10
ENSMUST00000201205.4
ENSMUST00000201781.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202937.4
CDS CCA 90 bp CTGCTGCCCCAGTTCCTCTGTTTGCCATTATACTGTCTGTTCCGTTaGCAGGGGGTGTGCAGGAAGAGGTGCTGTAATGGTTTGTGCCAC +
Preference number: 5 (lower is better)
Translates to: LLPQFLCLPLYCLFR*QGVCRKRCCNGLCH
Trigger: GTGGCACAAACCATTACAGCACCTCTTCCTGCACACCCCCTGCCAACGGAACAGACAGTATAATGGCAAACAGAGGAACTGGGGCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 32 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000145918.5
ENSMUST00000200703.4
ENSMUST00000200862.4
ENSMUST00000200921.4
ENSMUST00000201037.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000201964.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202751.4
ENSMUST00000202765.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACAAATCACTCAGCTCTTaGTCCGTCCCTAAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHKSLSS*SVPKAA
Trigger: GGCTGCCTTAGGGACGGACAAAGAGCTGAGTGATTT...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCGAAAGGGTTCCTGGATaGCCCATATCCATGTCCCCT +
Preference number: 5 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRERVPG*PISMSP
Trigger: AGGGGACATGGATATGGGCAATCCAGGAACCCTTTC...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACGCTGTGATGGCCATCTaGCATGAAGAAGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHAVMAI*HEEGAR
Trigger: CCTAGCTCCTTCTTCATGCAAGATGGCCATCACAGC...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GATATCTCGGACCCTCAGGCGCTCACGGGCATTATTGGCCATCCTCCGTTCCTTAGGTGCTGTAATGGTTaGTGCCACTACGATGGAACG +
Preference number: 5 (lower is better)
Translates to: DISDPQALTGIIGHPPFLRCCNG*CHYDGT
Trigger: CGTTCCATCGTAGTGGCACAAACCATTACAGCACCT...AAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGAGATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202751.4
CDS-3UTR CAA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACGGGAGCCCACAGGAGTaGAAGGATTGGAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYGSPQE*KDWRKS
Trigger: GCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCCC...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGGGGAGCCCACAGGAGTaGAAGGATTGGAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVGSPQE*KDWRKS
Trigger: GCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCCC...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATAGACTGGACCGGAAGTaGTGGGACCGGAACCTGGTT +
Preference number: 5 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDRLDRK*WDRNLV
Trigger: AACCAGGTTCCGGTCCCACAACTTCCGGTCCAGTCT...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTCAAGTCAGGGGAAGTaGCAGACTGGACCGGAAGTT +
Preference number: 5 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRSSQGK*QTGPEV
Trigger: AACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTGA...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTCCCTCTGTAAGGGTCTaGGGGTGGGTTCAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSPSVRV*GWVQVR
Trigger: CCTGACTTGAACCCACCCCAAGACCCTTACAGAGGG...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCCCCTCGTCGTCGGATTaGATCTCAGAGCTACCAGAA +
Preference number: 5 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFPSSSD*ISELPE
Trigger: TTCTGGTAGCTCTGAGATCAAATCCGACGACGAGGG...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACCCCTCGTCGTCGGATTaGATCTCAGAGCTACCAGAA +
Preference number: 5 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHPSSSD*ISELPE
Trigger: TTCTGGTAGCTCTGAGATCAAATCCGACGACGAGGG...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCCCCTCGTCGTCGGATTaGATCTCAGAGCTACCAGAA +
Preference number: 5 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRPSSSD*ISELPE
Trigger: TTCTGGTAGCTCTGAGATCAAATCCGACGACGAGGG...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACTCCTTGAAAGCCTCGTaGATATCTCGGACCCTCAGG +
Preference number: 5 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHSLKAS*ISRTLR
Trigger: CCTGAGGGTCCGAGATATCAACGAGGCTTTCAAGGA...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GGTCAGCATTTCGTCCTGCACTGCCCCTCCGGAAGCAGAGTTGGCACTACAGGTATACGGCCAAGCTCCTaGAAAGCCTCGTTGATATCT +
Preference number: 5 (lower is better)
Translates to: GQHFVLHCPSGSRVGTTGIRPSS*KASLIS
Trigger: AGATATCAACGAGGCTTTCAAGGAGCTTGGCCGTAT...ACCTGTAGTGCCAACTCTGCTTCCGGAGGGGCAGTGCAGGACGAAATGCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS GCA 90 bp GTACCTCCATGGCACTACTGTGAAGAGGCCTCCGGCGGGCATTATTaGTTGAATACTGATAGTACTGGGAGCCAGGTTTGGTGGGCGAAA +
Preference number: 5 (lower is better)
Translates to: VPPWHYCEEASGGHY*LNTDSTGSQVWWAK
Trigger: TTTCGCCCACCAAACCTGGCTCCCAGTACTATCAGTATTCAAGCAATAATGCCCGCCGGAGGCCTCTTCACAGTAGTGCCATGGAGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 34 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000128706.8
ENSMUST00000200813.4
ENSMUST00000200862.4
ENSMUST00000200966.4
ENSMUST00000201094.4
ENSMUST00000201124.4
ENSMUST00000201181.4
ENSMUST00000201205.4
ENSMUST00000201235.4
ENSMUST00000201288.4
ENSMUST00000201299.4
ENSMUST00000201410.4
ENSMUST00000201537.4
ENSMUST00000201627.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202074.4
ENSMUST00000202116.4
ENSMUST00000202350.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202477.4
ENSMUST00000202674.4
ENSMUST00000202765.4
ENSMUST00000202937.4
ENSMUST00000207214.2
ENSMUST00000209174.2
CDS GCA 90 bp CCATTATACTGTCTGTTCCGTTGGCAGGGGGTGTGCAGGAAGAGGTaGTGTAATGGTTTGTGCCACTACGATGGAACGTGGACATCGGAG +
Preference number: 5 (lower is better)
Translates to: PLYCLFRWQGVCRKR*CNGLCHYDGTWTSE
Trigger: CTCCGATGTCCACGTTCCATCGTAGTGGCACAAACCATTACAGCACCTCTTCCTGCACACCCCCTGCCAACGGAACAGACAGTATAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 32 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000145918.5
ENSMUST00000200703.4
ENSMUST00000200862.4
ENSMUST00000200921.4
ENSMUST00000201037.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000201964.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202751.4
ENSMUST00000202765.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS CCA 90 bp GGCGGGCATTATTGCTTGAATACTGATAGTACTGGGAGCCAGGTTTaGTGGGCGAAAGGGTTCCTGGATTGCCCATATCCATGTCCCCTC +
Preference number: 5 (lower is better)
Translates to: GGHYCLNTDSTGSQV*WAKGFLDCPYPCPL
Trigger: GAGGGGACATGGATATGGGCAATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGTACTATCAGTATTCAAGCAATAATGCCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000128706.8
ENSMUST00000201124.4
ENSMUST00000201235.4
ENSMUST00000201288.4
ENSMUST00000201299.4
ENSMUST00000201537.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202074.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
CDS-3UTR CAA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAAATCACTCAGCTCTTaGTCCGTCCCTAAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQKSLSS*SVPKAA
Trigger: GGCTGCCTTAGGGACGGACAAAGAGCTGAGTGATTT...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202116.4
CDS-3UTR CAA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCCACTCGCCAAAGAAGTaGGTCCATTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFHSPKK*VHFSHC
Trigger: GCAGTGGGAAAAATGGACCAACTTCTTTGGCGAGTG...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGGAAAGGGTTCCTGGATaGCCCATATCCATGTCCCCT +
Preference number: 5 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQERVPG*PISMSP
Trigger: AGGGGACATGGATATGGGCAATCCAGGAACCCTTTC...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGGAAAGGGTTCCTGGATaGCCCATATCCATGTCCCCT +
Preference number: 5 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVERVPG*PISMSP
Trigger: AGGGGACATGGATATGGGCAATCCAGGAACCCTTTC...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCAGCTGTGATGGCCATCTaGCATGAAGAAGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: RIAIQSLGCVSACTYRFAAVMAI*HEEGAR
Trigger: CCTAGCTCCTTCTTCATGCAAGATGGCCATCACAGC...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGGCTGTGATGGCCATCTaGCATGAAGAAGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVAVMAI*HEEGAR
Trigger: CCTAGCTCCTTCTTCATGCAAGATGGCCATCACAGC...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGCTGTGATGGCCATCTaGCATGAAGAAGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSAVMAI*HEEGAR
Trigger: CCTAGCTCCTTCTTCATGCAAGATGGCCATCACAGC...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTACTACCCATCGCTCCGTaGTGGGAGGGTCCCATGATC +
Preference number: 5 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLLPIAP*WEGPMI
Trigger: GATCATGGGACCCTCCCACAACGGAGCGATGGGTAG...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TTGGAATCAGTTGGACCACTGGGTGGGCTGAAAGCTGTCAAAGCATTAGTGTTCCTACCCATCGCTCCGTaGTGGGAGGGTCCCATGATC +
Preference number: 5 (lower is better)
Translates to: LESVGPLGGLKAVKALVFLPIAP*WEGPMI
Trigger: GATCATGGGACCCTCCCACAACGGAGCGATGGGTAG...GAACACTAATGCTTTGACAGCTTTCAGCCCACCCAGTGGTCCAACTGATTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAGGACCGGAACCTGGTTaGGCAGGAGAGAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLGPEPG*AGENGC
Trigger: GCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTCC...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp CATCGTTCAGGGAGGAGGGGAAGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGAGACTGGACCGGAAGTaGTGGGACCGGAACCTGGTT +
Preference number: 5 (lower is better)
Translates to: HRSGRRGSYCLSSLPFLERLDRK*WDRNLV
Trigger: AACCAGGTTCCGGTCCCACAACTTCCGGTCCAGTCT...CTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTCCCCTCCTCCCTGAACGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp TGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATCCGGTAATTCCCTCTGTAAGGGTCTaGGGGTGGGTTCAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: CWFCYEGSRASPIQYPVIPSVRV*GWVQVR
Trigger: CCTGACTTGAACCCACCCCAAGACCCTTACAGAGGG...AATTACCGGATATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGCCCTCGTCGTCGGATTaGATCTCAGAGCTACCAGAA +
Preference number: 5 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQPSSSD*ISELPE
Trigger: TTCTGGTAGCTCTGAGATCAAATCCGACGACGAGGG...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GTACCTCTGAAAATCCCAGGGGAGGGTAACAAGGGCAGCGCCACAAGCCAGACAAGAAGATTTTGTGTCTaGCAGGTTCTCATCGCCCTC +
Preference number: 5 (lower is better)
Translates to: VPLKIPGEGNKGSATSQTRRFCV*QVLIAL
Trigger: GAGGGCGATGAGAACCTGCAAGACACAAAATCTTCT...TGTCTGGCTTGTGGCGCTGCCCTTGTTACCCTCCCCTGGGATTTTCAGAGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGTCCTTGAAAGCCTCGTaGATATCTCGGACCCTCAGG +
Preference number: 5 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQSLKAS*ISRTLR
Trigger: CCTGAGGGTCCGAGATATCAACGAGGCTTTCAAGGA...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCATCCTTGAAAGCCTCGTaGATATCTCGGACCCTCAGG +
Preference number: 5 (lower is better)
Translates to: RIAIQSLGCVSACTYRFASLKAS*ISRTLR
Trigger: CCTGAGGGTCCGAGATATCAACGAGGCTTTCAAGGA...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS TCA 90 bp CACACTTCCCCCGAGGCCTGGCATTTTGTGCACGCCAGCATCACTTaGGCCAGTGAAATGTCCACTCGCCAAAGAAGTTGGTCCATTTTT +
Preference number: 5 (lower is better)
Translates to: HTSPEAWHFVHASIT*ASEMSTRQRSWSIF
Trigger: AAAAATGGACCAACTTCTTTGGCGAGTGGACATTTCACTGGCTCAAGTGATGCTGGCGTGCACAAAATGCCAGGCCTCGGGGGAAGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066717.12
CDS TCA 90 bp TTGTGCCACTACGATGGAACGTGGACATCGGAGGAAGACTGGAGTTaGTGTCTGCCGAGGAGTGGGATGGATAGCTCAAACGTTCATGTG +
Preference number: 5 (lower is better)
Translates to: LCHYDGTWTSEEDWS*CLPRSGMDSSNVHV
Trigger: CACATGAACGTTTGAGCTATCCATCCCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCCGATGTCCACGTTCCATCGTAGTGGCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 33 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000145918.5
ENSMUST00000200703.4
ENSMUST00000200862.4
ENSMUST00000200921.4
ENSMUST00000200966.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000201964.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202751.4
ENSMUST00000202765.4
ENSMUST00000202772.4
ENSMUST00000202937.4
ENSMUST00000209174.2
CDS TCA 90 bp TTGTGCCACTACGATGGAACGTGGACATCGGAGGAAGACTGGAGTTaGTGTCTGCCGAGGAGTGGGATGGATAGCTCGCTTTCCCATTAT +
Preference number: 5 (lower is better)
Translates to: LCHYDGTWTSEEDWS*CLPRSGMDSSLSHY
Trigger: ATAATGGGAAAGCGAGCTATCCATCCCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCCGATGTCCACGTTCCATCGTAGTGGCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201037.4
CDS GCA 90 bp GGGATGGATAGCTCAAACGTTCATGTGGATGCAGGCTACAGTAGCTaGTGGACTGTGGGATATGAGAAGAATTGCCCAGCATCCCTCCGT +
Preference number: 5 (lower is better)
Translates to: GMDSSNVHVDAGYSS*WTVGYEKNCPASLR
Trigger: ACGGAGGGATGCTGGGCAATTCTTCTCATATCCCACAGTCCAGCAGCTACTGTAGCCTGCATCCACATGAACGTTTGAGCTATCCATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 35 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000145918.5
ENSMUST00000200703.4
ENSMUST00000200862.4
ENSMUST00000200921.4
ENSMUST00000200966.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201124.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000201964.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202350.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202751.4
ENSMUST00000202765.4
ENSMUST00000202772.4
ENSMUST00000202937.4
ENSMUST00000209174.2
CDS GCA 90 bp ACTACGATGGAACGTGGACATCGGAGGAAGACTGGAGTTGATGTCTaGCGAGGAGTGGGATGGATAGCTCAAACGTTCATGTGGATGCAG +
Preference number: 5 (lower is better)
Translates to: TTMERGHRRKTGVDV*RGVGWIAQTFMWMQ
Trigger: CTGCATCCACATGAACGTTTGAGCTATCCATCCCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCCGATGTCCACGTTCCATCGTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 33 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000145918.5
ENSMUST00000200703.4
ENSMUST00000200862.4
ENSMUST00000200921.4
ENSMUST00000200966.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000201964.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202751.4
ENSMUST00000202765.4
ENSMUST00000202772.4
ENSMUST00000202937.4
ENSMUST00000209174.2
CDS GCA 90 bp CGGGCATTATTGGCCATCCTCCGTTCCTTCTCGCGCTCAGCCTTCTaGTCTGGGGTCAGGTCCTCATCATCGTTATTGCTAGTAATTGAT +
Preference number: 5 (lower is better)
Translates to: RALLAILRSFSRSAF*SGVRSSSSLLLVID
Trigger: ATCAATTACTAGCAATAACGATGATGAGGACCTGACCCCAGAGCAGAAGGCTGAGCGCGAGAAGGAACGGAGGATGGCCAATAATGCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000201094.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS CCA 90 bp GGGCATTATTGCTTGAATACTGATAGTACTGGGAGCCAGGTTTGGTaGGCGAAAGGGTTCCTGGATTGCCCATATCCATGTCCCCTCCGA +
Preference number: 5 (lower is better)
Translates to: GHYCLNTDSTGSQVW*AKGFLDCPYPCPLR
Trigger: TCGGAGGGGACATGGATATGGGCAATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGTACTATCAGTATTCAAGCAATAATGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000128706.8
ENSMUST00000201124.4
ENSMUST00000201235.4
ENSMUST00000201288.4
ENSMUST00000201299.4
ENSMUST00000201537.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202074.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
CDS-3UTR CAA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGCACTCGCCAAAGAAGTaGGTCCATTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQHSPKK*VHFSHC
Trigger: GCAGTGGGAAAAATGGACCAACTTCTTTGGCGAGTG...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACACTCGCCAAAGAAGTaGGTCCATTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: RIAIQSLGCVSACTYRFAHSPKK*VHFSHC
Trigger: GCAGTGGGAAAAATGGACCAACTTCTTTGGCGAGTG...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGCACTCGCCAAAGAAGTaGGTCCATTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVHSPKK*VHFSHC
Trigger: GCAGTGGGAAAAATGGACCAACTTCTTTGGCGAGTG...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGAGTTCCTGGACGGGCTaGGATGGCCTCCAGTTCCCC +
Preference number: 5 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLSSWTG*DGLQFP
Trigger: GGGGAACTGGAGGCCATCCAAGCCCGTCCAGGAACT...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACAAAGGTGGAGAGAGATaGTCATGTGACCCAAGATCC +
Preference number: 5 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHKGGER*SCDPRS
Trigger: GGATCTTGGGTCACATGACAATCTCTCTCCACCTTT...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp CTCGCCCGGGCAATGCTGCATGTAATTCCTACACATGATGTGACTTTTAAGTCCTACTGGGAGCCAGGTTaGGTGGGCGAAAGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: LARAMLHVIPTHDVTFKSYWEPG*VGERVP
Trigger: AGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGTA...GGACTTAAAAGTCACATCATGTGTAGGAATTACATGCAGCATTGCCCGGGCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAGGAGGAAGACTGGAGTaGATGTCTGCCGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLGGRLE*MSAEEW
Trigger: CCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCC...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp ATGTATTCAGAAACGTCTCGGTCACTGCACACTACTTCGGCTACACAGGTAGGTGGAGGAAGACTGGAGTaGATGTCTGCCGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: MYSETSRSLHTTSATQVGGGRLE*MSAEEW
Trigger: CCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCC...ACCTACCTGTGTAGCCGAAGTAGTGTGCAGTGACCGAGACGTTTCTGAATACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACAGGTGCTGTAATGGTTaGTGCCACTACGATGGAACG +
Preference number: 5 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYRCCNG*CHYDGT
Trigger: CGTTCCATCGTAGTGGCACAAACCATTACAGCACCT...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGAGGTGCTGTAATGGTTaGTGCCACTACGATGGAACG +
Preference number: 5 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVRCCNG*CHYDGT
Trigger: CGTTCCATCGTAGTGGCACAAACCATTACAGCACCT...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAAGGTGCTGTAATGGTTaGTGCCACTACGATGGAACG +
Preference number: 5 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSRCCNG*CHYDGT
Trigger: CGTTCCATCGTAGTGGCACAAACCATTACAGCACCT...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCAAGGTGCTGTAATGGTTaGTGCCACTACGATGGAACG +
Preference number: 5 (lower is better)
Translates to: RIAIQSLGCVSACTYRFARCCNG*CHYDGT
Trigger: CGTTCCATCGTAGTGGCACAAACCATTACAGCACCT...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCATGAGCGAGTGTCTGTaGGCTGAGAGAAGACTAGTT +
Preference number: 5 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFMSECL*AERRLV
Trigger: AACTAGTCTTCTCTCAGCCAACAGACACTCGCTCAT...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCATGAGCGAGTGTCTGTaGGCTGAGAGAAGACTAGTT +
Preference number: 5 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRMSECL*AERRLV
Trigger: AACTAGTCTTCTCTCAGCCAACAGACACTCGCTCAT...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCGGACCGGAACCTGGTTaGGCAGGAGAGAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLGPEPG*AGENGC
Trigger: GCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTCC...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AGAGTTGGCACTACAGGTTACGATAACAAACCGGGGGAAGGGACAAAAATCAGAGGACCGGAACCTGGTTaGGCAGGAGAGAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: RVGTTGYDNKPGEGTKIRGPEPG*AGENGC
Trigger: GCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTCC...TCTGATTTTTGTCCCTTCCCCCGGTTTGTTATCGTAACCTGTAGTGCCAACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATTCAAGTCAGGGGAAGTaGCAGACTGGACCGGAAGTT +
Preference number: 5 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDSSQGK*QTGPEV
Trigger: AACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTGA...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TCAGGACGTTTGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATACCCTCGTCGTCGGATTaGATCTCAGAGCTACCAGAA +
Preference number: 5 (lower is better)
Translates to: SGRLLVLLRGQPGFPYSIPSSSD*ISELPE
Trigger: TTCTGGTAGCTCTGAGATCAAATCCGACGACGAGGG...TATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCAAACGTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp CTCGCCCGGGCAATGCTGCATGTAATTCCTACACATGATGTGACTTTTAAGTCCCGCTCACGGGCATTATaGGCCATCCTCCGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LARAMLHVIPTHDVTFKSRSRAL*AILRSF
Trigger: GAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCG...GGACTTAAAAGTCACATCATGTGTAGGAATTACATGCAGCATTGCCCGGGCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATTCCTTGAAAGCCTCGTaGATATCTCGGACCCTCAGG +
Preference number: 5 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDSLKAS*ISRTLR
Trigger: CCTGAGGGTCCGAGATATCAACGAGGCTTTCAAGGA...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTTCCTTGAAAGCCTCGTaGATATCTCGGACCCTCAGG +
Preference number: 5 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSSLKAS*ISRTLR
Trigger: CCTGAGGGTCCGAGATATCAACGAGGCTTTCAAGGA...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCATACGGCCAAGCTCCTaGAAAGCCTCGTTGATATCT +
Preference number: 5 (lower is better)
Translates to: CGRIAIQSLGCVSACTYRIRPSS*KASLIS
Trigger: AGATATCAACGAGGCTTTCAAGGAGCTTGGCCGTAT...GCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACATTCCTTTCTCGAACTaGCTGCTCCAGGCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYIPFSN*LLQAED
Trigger: ATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAGGAAT...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGATTCCTTTCTCGAACTaGCTGCTCCAGGCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQIPFSN*LLQAED
Trigger: ATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAGGAAT...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATTCCTTTCTCGAACTaGCTGCTCCAGGCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: SVSGLCLSLYIPLRTFRVIPFSN*LLQAED
Trigger: ATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAGGAAT...CACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAATTCCTTTCTCGAACTaGCTGCTCCAGGCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSIPFSN*LLQAED
Trigger: ATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAGGAAT...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS GCA 90 bp TTCCTCTGTTTGCCATTATACTGTCTGTTCCGTTGGCAGGGGGTGTaGAGGAAGAGGTGCTGTAATGGTTTGTGCCACTACGATGGAACG +
Preference number: 5 (lower is better)
Translates to: FLCLPLYCLFRWQGV*RKRCCNGLCHYDGT
Trigger: CGTTCCATCGTAGTGGCACAAACCATTACAGCACCTCTTCCTGCACACCCCCTGCCAACGGAACAGACAGTATAATGGCAAACAGAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 32 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000145918.5
ENSMUST00000200703.4
ENSMUST00000200862.4
ENSMUST00000200921.4
ENSMUST00000201037.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000201964.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202751.4
ENSMUST00000202765.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS CCA 90 bp ATGGATAGCTCAAACGTTCATGTGGATGCAGGCTACAGTAGCTGCTaGACTGTGGGATATGAGAAGAATTGCCCAGCATCCCTCCGTAGC +
Preference number: 5 (lower is better)
Translates to: MDSSNVHVDAGYSSC*TVGYEKNCPASLRS
Trigger: GCTACGGAGGGATGCTGGGCAATTCTTCTCATATCCCACAGTCCAGCAGCTACTGTAGCCTGCATCCACATGAACGTTTGAGCTATCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 35 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000145918.5
ENSMUST00000200703.4
ENSMUST00000200862.4
ENSMUST00000200921.4
ENSMUST00000200966.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201124.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000201964.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202350.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202751.4
ENSMUST00000202765.4
ENSMUST00000202772.4
ENSMUST00000202937.4
ENSMUST00000209174.2
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACAGTTCCTGGACGGGCTaGGATGGCCTCCAGTTCCCC +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDSSWTG*DGLQFP
Trigger: GGGGAACTGGAGGCCATCCAAGCCCGTCCAGGAACT...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR CAA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAAAAGGTGGAGAGAGATaGTCATGTGACCCAAGATCC +
Preference number: 5 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSKGGER*SCDPRS
Trigger: GGATCTTGGGTCACATGACAATCTCTCTCCACCTTT...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCAAAAGGTGGAGAGAGATaGTCATGTGACCCAAGATCC +
Preference number: 5 (lower is better)
Translates to: RIAIQSLGCVSACTYRFAKGGER*SCDPRS
Trigger: GGATCTTGGGTCACATGACAATCTCTCTCCACCTTT...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GGTCAGCATTTCGTCCTGCACTGCCCCTCCGGAAGCAGAGTTGGCACTACAGGTCTTTGTATTCTGGAATaGACAAAAGGTGGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: GQHFVLHCPSGSRVGTTGLCILE*TKGGER
Trigger: TCTCTCTCCACCTTTTGTCAATTCCAGAATACAAAG...ACCTGTAGTGCCAACTCTGCTTCCGGAGGGGCAGTGCAGGACGAAATGCTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp TGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATCCGGTAATTGAAAGGGTTCCTGGATaGCCCATATCCATGTCCCCT +
Preference number: 5 (lower is better)
Translates to: CWFCYEGSRASPIQYPVIERVPG*PISMSP
Trigger: AGGGGACATGGATATGGGCAATCCAGGAACCCTTTC...AATTACCGGATATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTACTGGGAGCCAGGTTaGGTGGGCGAAAGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQYWEPG*VGERVP
Trigger: AGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGTA...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCTTTTCGGACTTTCTTaGTCTGTACCTCCATGGCAC +
Preference number: 5 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYLFGLS*SVPPWH
Trigger: GTGCCATGGAGGTACAGACAAAGAAAGTCCGAAAAG...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCACTTTTCGGACTTTCTTaGTCTGTACCTCCATGGCAC +
Preference number: 5 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSLFGLS*SVPPWH
Trigger: GTGCCATGGAGGTACAGACAAAGAAAGTCCGAAAAG...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGGGAGGAAGACTGGAGTaGATGTCTGCCGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQGGRLE*MSAEEW
Trigger: CCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCC...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAATACTGTCTGTTCCGTaGGCAGGGGGTGTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLILSVP*AGGVQE
Trigger: TTCCTGCACACCCCCTGCCAACGGAACAGACAGTAT...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCCCCAGTTCCTCTGTTaGCCATTATACTGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYPQFLC*PLYCLF
Trigger: GAACAGACAGTATAATGGCAAACAGAGGAACTGGGG...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGCACCTTTGTGCCACCGCATCAGGGAGCCCACAGGAGTaGAAGGATTGGAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: SYCLSSLPFLEHLCATASGSPQE*KDWRKS
Trigger: GCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCCC...TGATGCGGTGGCACAAAGGTGCTCCAAGAAGGGCAAAGAAGAAAGACAGTAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGCTACCCATCGCTCCGTaGTGGGAGGGTCCCATGATC +
Preference number: 5 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLLPIAP*WEGPMI
Trigger: GATCATGGGACCCTCCCACAACGGAGCGATGGGTAG...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAATGAGCGAGTGTCTGTaGGCTGAGAGAAGACTAGTT +
Preference number: 5 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSMSECL*AERRLV
Trigger: AACTAGTCTTCTCTCAGCCAACAGACACTCGCTCAT...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp CCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGATGAGCGAGTGTCTGTaGGCTGAGAGAAGACTAGTT +
Preference number: 5 (lower is better)
Translates to: PFSLWAVSQPVHTASHIQMSECL*AERRLV
Trigger: AACTAGTCTTCTCTCAGCCAACAGACACTCGCTCAT...CTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGGGACCGGAACCTGGTTaGGCAGGAGAGAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLGPEPG*AGENGC
Trigger: GCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTCC...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGAGACTGGACCGGAAGTaGTGGGACCGGAACCTGGTT +
Preference number: 5 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQRLDRK*WDRNLV
Trigger: AACCAGGTTCCGGTCCCACAACTTCCGGTCCAGTCT...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATCCGGTAATTTCAAGTCAGGGGAAGTaGCAGACTGGACCGGAAGTT +
Preference number: 5 (lower is better)
Translates to: CWFCYEGSRASPIQYPVISSQGK*QTGPEV
Trigger: AACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTGA...AATTACCGGATATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTCGCTCACGGGCATTATaGGCCATCCTCCGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSRSRAL*AILRSF
Trigger: GAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCG...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCCGCTCACGGGCATTATaGGCCATCCTCCGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLRSRAL*AILRSF
Trigger: GAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCG...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAATACGGCCAAGCTCCTaGAAAGCCTCGTTGATATCT +
Preference number: 5 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSIRPSS*KASLIS
Trigger: AGATATCAACGAGGCTTTCAAGGAGCTTGGCCGTAT...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS GCA 90 bp ACTACGATGGAACGTGGACATCGGAGGAAGACTGGAGTTGATGTCTaGCGAGGAGTGGGATGGATAGCTCGCTTTCCCATTATAGTAGTA +
Preference number: 5 (lower is better)
Translates to: TTMERGHRRKTGVDV*RGVGWIARFPIIVV
Trigger: TACTACTATAATGGGAAAGCGAGCTATCCATCCCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCCGATGTCCACGTTCCATCGTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201037.4
CDS-3UTR CAA 90 bp AGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGCACCTTTGTGCCACCGCATCAAAATCACTCAGCTCTTaGTCCGTCCCTAAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: SYCLSSLPFLEHLCATASKSLSS*SVPKAA
Trigger: GGCTGCCTTAGGGACGGACAAAGAGCTGAGTGATTT...TGATGCGGTGGCACAAAGGTGCTCCAAGAAGGGCAAAGAAGAAAGACAGTAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp GTAGGAGTCCTATGTGTTCACTGCACTACACACCAAAGTCCATTGTTGGAAAGATACTGGGAGCCAGGTTaGGTGGGCGAAAGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: VGVLCVHCTTHQSPLLERYWEPG*VGERVP
Trigger: AGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGTA...TCTTTCCAACAATGGACTTTGGTGTGTAGTGCAGTGAACACATAGGACTCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp AGCCTCACTTTTGCAAACAGTGACCACCTTTGCAGCTCTTATTCATCAACCTCTTACTGGGAGCCAGGTTaGGTGGGCGAAAGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: SLTFANSDHLCSSYSSTSYWEPG*VGERVP
Trigger: AGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGTA...AGAGGTTGATGAATAAGAGCTGCAAAGGTGGTCACTGTTTGCAAAAGTGAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR CAA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGTACTGGGAGCCAGGTTaGGTGGGCGAAAGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLYWEPG*VGERVP
Trigger: AGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGTA...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp ATGTATTCAGAAACGTCTCGGTCACTGCACACTACTTCGGCTACACAGGTAGGTGCTGTGATGGCCATCTaGCATGAAGAAGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: MYSETSRSLHTTSATQVGAVMAI*HEEGAR
Trigger: CCTAGCTCCTTCTTCATGCAAGATGGCCATCACAGC...ACCTACCTGTGTAGCCGAAGTAGTGTGCAGTGACCGAGACGTTTCTGAATACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGGGAGGAAGACTGGAGTaGATGTCTGCCGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLGGRLE*MSAEEW
Trigger: CCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCC...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCATACTGTCTGTTCCGTaGGCAGGGGGTGTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLILSVP*AGGVQE
Trigger: TTCCTGCACACCCCCTGCCAACGGAACAGACAGTAT...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TCAGGACGTTTGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATACCCCAGTTCCTCTGTTaGCCATTATACTGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: SGRLLVLLRGQPGFPYSIPQFLC*PLYCLF
Trigger: GAACAGACAGTATAATGGCAAACAGAGGAACTGGGG...TATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCAAACGTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp TTCCAAAAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCGGGAGCCCACAGGAGTaGAAGGATTGGAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: FQKKFRHKCIAPQCGRIAGSPQE*KDWRKS
Trigger: GCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCCC...GGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTTTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCGGGAGCCCACAGGAGTaGAAGGATTGGAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLGSPQE*KDWRKS
Trigger: GCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCCC...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTGGGAGCCCACAGGAGTaGAAGGATTGGAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSGSPQE*KDWRKS
Trigger: GCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCCC...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCTACCCATCGCTCCGTaGTGGGAGGGTCCCATGATC +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLLPIAP*WEGPMI
Trigger: GATCATGGGACCCTCCCACAACGGAGCGATGGGTAG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTACCCATCGCTCCGTaGTGGGAGGGTCCCATGATC +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDLPIAP*WEGPMI
Trigger: GATCATGGGACCCTCCCACAACGGAGCGATGGGTAG...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTATGAGCGAGTGTCTGTaGGCTGAGAGAAGACTAGTT +
Preference number: 5 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSMSECL*AERRLV
Trigger: AACTAGTCTTCTCTCAGCCAACAGACACTCGCTCAT...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGGACCGGAACCTGGTTaGGCAGGAGAGAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDGPEPG*AGENGC
Trigger: GCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTCC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGGACCGGAACCTGGTTaGGCAGGAGAGAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLGPEPG*AGENGC
Trigger: GCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTCC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGCCCTCTGTAAGGGTCTaGGGGTGGGTTCAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLPSVRV*GWVQVR
Trigger: CCTGACTTGAACCCACCCCAAGACCCTTACAGAGGG...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATAGAAGATTTTGTGTCTaGCAGGTTCTCATCGCCCTC +
Preference number: 5 (lower is better)
Translates to: SLWAVSQPVHTASHIQSDRRFCV*QVLIAL
Trigger: GAGGGCGATGAGAACCTGCAAGACACAAAATCTTCT...ATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTATACGGCCAAGCTCCTaGAAAGCCTCGTTGATATCT +
Preference number: 5 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSIRPSS*KASLIS
Trigger: AGATATCAACGAGGCTTTCAAGGAGCTTGGCCGTAT...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATCCGGTAATTATTCCTTTCTCGAACTaGCTGCTCCAGGCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: CWFCYEGSRASPIQYPVIIPFSN*LLQAED
Trigger: ATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAGGAAT...AATTACCGGATATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp TCACAGGTTCCCAGAATGCTTGGGTTTCAGCTGGATTCTCCTAGCCTCACTTTTCACTCGCCAAAGAAGTaGGTCCATTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: SQVPRMLGFQLDSPSLTFHSPKK*VHFSHC
Trigger: GCAGTGGGAAAAATGGACCAACTTCTTTGGCGAGTG...AAAAGTGAGGCTAGGAGAATCCAGCTGAAACCCAAGCATTCTGGGAACCTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR CAA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTACACTCGCCAAAGAAGTaGGTCCATTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLHSPKK*VHFSHC
Trigger: GCAGTGGGAAAAATGGACCAACTTCTTTGGCGAGTG...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGAGTTCCTGGACGGGCTaGGATGGCCTCCAGTTCCCC +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLSSWTG*DGLQFP
Trigger: GGGGAACTGGAGGCCATCCAAGCCCGTCCAGGAACT...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR CAA 90 bp CAAGTCAAATACACAGGTGTGTGGGTTAATCTAGCACATTTGCAAAACCCATTAAGTTCCTGGACGGGCTaGGATGGCCTCCAGTTCCCC +
Preference number: 5 (lower is better)
Translates to: QVKYTGVWVNLAHLQNPLSSWTG*DGLQFP
Trigger: GGGGAACTGGAGGCCATCCAAGCCCGTCCAGGAACT...TAATGGGTTTTGCAAATGTGCTAGATTAACCCACACACCTGTGTATTTGACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTACTGGGAGCCAGGTTaGGTGGGCGAAAGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLYWEPG*VGERVP
Trigger: AGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGTA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCGCTGTGATGGCCATCTaGCATGAAGAAGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLAVMAI*HEEGAR
Trigger: CCTAGCTCCTTCTTCATGCAAGATGGCCATCACAGC...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTGCTGTGATGGCCATCTaGCATGAAGAAGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSAVMAI*HEEGAR
Trigger: CCTAGCTCCTTCTTCATGCAAGATGGCCATCACAGC...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGGAGGAAGACTGGAGTaGATGTCTGCCGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDGGRLE*MSAEEW
Trigger: CCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGGAGGAAGACTGGAGTaGATGTCTGCCGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLGGRLE*MSAEEW
Trigger: CCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp TTGGAATCAGTTGGACCACTGGGTGGGCTGAAAGCTGTCAAAGCATTAGTGTTCAGGTGCTGTAATGGTTaGTGCCACTACGATGGAACG +
Preference number: 5 (lower is better)
Translates to: LESVGPLGGLKAVKALVFRCCNG*CHYDGT
Trigger: CGTTCCATCGTAGTGGCACAAACCATTACAGCACCT...GAACACTAATGCTTTGACAGCTTTCAGCCCACCCAGTGGTCCAACTGATTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAGGTGCTGTAATGGTTaGTGCCACTACGATGGAACG +
Preference number: 5 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLRCCNG*CHYDGT
Trigger: CGTTCCATCGTAGTGGCACAAACCATTACAGCACCT...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp CATCGTTCAGGGAGGAGGGGAAGTTACTGTCTTTCTTCTTTGCCCTTCTTGGAGATGAGCGAGTGTCTGTaGGCTGAGAGAAGACTAGTT +
Preference number: 5 (lower is better)
Translates to: HRSGRRGSYCLSSLPFLEMSECL*AERRLV
Trigger: AACTAGTCTTCTCTCAGCCAACAGACACTCGCTCAT...CTCCAAGAAGGGCAAAGAAGAAAGACAGTAACTTCCCCTCCTCCCTGAACGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTAGACTGGACCGGAAGTaGTGGGACCGGAACCTGGTT +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLRLDRK*WDRNLV
Trigger: AACCAGGTTCCGGTCCCACAACTTCCGGTCCAGTCT...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACAGACTGGACCGGAAGTaGTGGGACCGGAACCTGGTT +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDRLDRK*WDRNLV
Trigger: AACCAGGTTCCGGTCCCACAACTTCCGGTCCAGTCT...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCTCAAGTCAGGGGAAGTaGCAGACTGGACCGGAAGTT +
Preference number: 5 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLSSQGK*QTGPEV
Trigger: AACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTGA...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCCCTCTGTAAGGGTCTaGGGGTGGGTTCAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDPSVRV*GWVQVR
Trigger: CCTGACTTGAACCCACCCCAAGACCCTTACAGAGGG...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCCCTCTGTAAGGGTCTaGGGGTGGGTTCAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLPSVRV*GWVQVR
Trigger: CCTGACTTGAACCCACCCCAAGACCCTTACAGAGGG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCCCCTCGTCGTCGGATTaGATCTCAGAGCTACCAGAA +
Preference number: 5 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLPSSSD*ISELPE
Trigger: TTCTGGTAGCTCTGAGATCAAATCCGACGACGAGGG...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACTCCTCATCATCGTTATaGCTAGATCTTGACCTAGTA +
Preference number: 5 (lower is better)
Translates to: GLPFSLWAVSQPVHTASHSSSSL*LDLDLV
Trigger: TACTAGGTCAAGATCTAGCAATAACGATGATGAGGA...GTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114978.9
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp GGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCTCCTCATCATCGTTATaGCTAGATCTTGACCTAGTA +
Preference number: 5 (lower is better)
Translates to: GRIAIQSLGCVSACTYRFSSSSL*LDLDLV
Trigger: TACTAGGTCAAGATCTAGCAATAACGATGATGAGGA...GAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114978.9
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCGCTCACGGGCATTATaGGCCATCCTCCGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLRSRAL*AILRSF
Trigger: GAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCGCTCACGGGCATTATaGGCCATCCTCCGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDRSRAL*AILRSF
Trigger: GAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCG...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp TTCCAAAAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCTCCTTGAAAGCCTCGTaGATATCTCGGACCCTCAGG +
Preference number: 5 (lower is better)
Translates to: FQKKFRHKCIAPQCGRIASLKAS*ISRTLR
Trigger: CCTGAGGGTCCGAGATATCAACGAGGCTTTCAAGGA...GGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTTTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp TGCTGGTTTTGTTACGAGGGCAGCCGGGCTTCCCCTATTCAATATCCGGTAATTATACGGCCAAGCTCCTaGAAAGCCTCGTTGATATCT +
Preference number: 5 (lower is better)
Translates to: CWFCYEGSRASPIQYPVIIRPSS*KASLIS
Trigger: AGATATCAACGAGGCTTTCAAGGAGCTTGGCCGTAT...AATTACCGGATATTGAATAGGGGAAGCCCGGCTGCCCTCGTAACAAAACCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAATTCCTTTCTCGAACTaGCTGCTCCAGGCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLIPFSN*LLQAED
Trigger: ATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAGGAAT...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TTCCAAAAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCCACTCGCCAAAGAAGTaGGTCCATTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: FQKKFRHKCIAPQCGRIAHSPKK*VHFSHC
Trigger: GCAGTGGGAAAAATGGACCAACTTCTTTGGCGAGTG...GGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTTTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp CTATACGCTTCTCCTGAATGTGATCGGACGATACCTGTTTCCTATATAATAATAAGTTCCTGGACGGGCTaGGATGGCCTCCAGTTCCCC +
Preference number: 5 (lower is better)
Translates to: LYASPECDRTIPVSYIIISSWTG*DGLQFP
Trigger: GGGGAACTGGAGGCCATCCAAGCCCGTCCAGGAACT...TATTATTATATAGGAAACAGGTATCGTCCGATCACATTCAGGAGAAGCGTATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp TTGGAATCAGTTGGACCACTGGGTGGGCTGAAAGCTGTCAAAGCATTAGTGTTCAAAGGTGGAGAGAGATaGTCATGTGACCCAAGATCC +
Preference number: 5 (lower is better)
Translates to: LESVGPLGGLKAVKALVFKGGER*SCDPRS
Trigger: GGATCTTGGGTCACATGACAATCTCTCTCCACCTTT...GAACACTAATGCTTTGACAGCTTTCAGCCCACCCAGTGGTCCAACTGATTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp GCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCACTTTGTATTCTGGAATaGACAAAAGGTGGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: AIQSLGCVSACTYRFAHSLCILE*TKGGER
Trigger: TCTCTCTCCACCTTTTGTCAATTCCAGAATACAAAG...TGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACTTTGTATTCTGGAATaGACAAAAGGTGGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: RIAIQSLGCVSACTYRFALCILE*TKGGER
Trigger: TCTCTCTCCACCTTTTGTCAATTCCAGAATACAAAG...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AGCCTCACTTTTGCAAACAGTGACCACCTTTGCAGCTCTTATTCATCAACCTCTGAAAGGGTTCCTGGATaGCCCATATCCATGTCCCCT +
Preference number: 5 (lower is better)
Translates to: SLTFANSDHLCSSYSSTSERVPG*PISMSP
Trigger: AGGGGACATGGATATGGGCAATCCAGGAACCCTTTC...AGAGGTTGATGAATAAGAGCTGCAAAGGTGGTCACTGTTTGCAAAAGTGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR CAA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGGAAAGGGTTCCTGGATaGCCCATATCCATGTCCCCT +
Preference number: 5 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLERVPG*PISMSP
Trigger: AGGGGACATGGATATGGGCAATCCAGGAACCCTTTC...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp CTCGCCCGGGCAATGCTGCATGTAATTCCTACACATGATGTGACTTTTAAGTCCCTTTTCGGACTTTCTTaGTCTGTACCTCCATGGCAC +
Preference number: 5 (lower is better)
Translates to: LARAMLHVIPTHDVTFKSLFGLS*SVPPWH
Trigger: GTGCCATGGAGGTACAGACAAAGAAAGTCCGAAAAG...GGACTTAAAAGTCACATCATGTGTAGGAATTACATGCAGCATTGCCCGGGCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAGGTGCTGTAATGGTTaGTGCCACTACGATGGAACG +
Preference number: 5 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLRCCNG*CHYDGT
Trigger: CGTTCCATCGTAGTGGCACAAACCATTACAGCACCT...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AGAGTTGGCACTACAGGTTACGATAACAAACCGGGGGAAGGGACAAAAATCAGAAGGTGCTGTAATGGTTaGTGCCACTACGATGGAACG +
Preference number: 5 (lower is better)
Translates to: RVGTTGYDNKPGEGTKIRRCCNG*CHYDGT
Trigger: CGTTCCATCGTAGTGGCACAAACCATTACAGCACCT...TCTGATTTTTGTCCCTTCCCCCGGTTTGTTATCGTAACCTGTAGTGCCAACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGAGGTGCTGTAATGGTTaGTGCCACTACGATGGAACG +
Preference number: 5 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQRCCNG*CHYDGT
Trigger: CGTTCCATCGTAGTGGCACAAACCATTACAGCACCT...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACATACTGTCTGTTCCGTaGGCAGGGGGTGTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDILSVP*AGGVQE
Trigger: TTCCTGCACACCCCCTGCCAACGGAACAGACAGTAT...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTATACTGTCTGTTCCGTaGGCAGGGGGTGTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLILSVP*AGGVQE
Trigger: TTCCTGCACACCCCCTGCCAACGGAACAGACAGTAT...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTACCCCAGTTCCTCTGTTaGCCATTATACTGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLPQFLC*PLYCLF
Trigger: GAACAGACAGTATAATGGCAAACAGAGGAACTGGGG...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp ATGTATTCAGAAACGTCTCGGTCACTGCACACTACTTCGGCTACACAGGTAGGTCCCCAGTTCCTCTGTTaGCCATTATACTGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: MYSETSRSLHTTSATQVGPQFLC*PLYCLF
Trigger: GAACAGACAGTATAATGGCAAACAGAGGAACTGGGG...ACCTACCTGTGTAGCCGAAGTAGTGTGCAGTGACCGAGACGTTTCTGAATACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGGGAGCCCACAGGAGTaGAAGGATTGGAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDGSPQE*KDWRKS
Trigger: GCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCCC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGGGAGCCCACAGGAGTaGAAGGATTGGAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLGSPQE*KDWRKS
Trigger: GCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCCC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCTACCCATCGCTCCGTaGTGGGAGGGTCCCATGATC +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLLPIAP*WEGPMI
Trigger: GATCATGGGACCCTCCCACAACGGAGCGATGGGTAG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAGGACCGGAACCTGGTTaGGCAGGAGAGAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: LKPLASAIHNYSDLSYITGPEPG*AGENGC
Trigger: GCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTCC...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGGACCGGAACCTGGTTaGGCAGGAGAGAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLGPEPG*AGENGC
Trigger: GCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTCC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGCCCTCGTCGTCGGATTaGATCTCAGAGCTACCAGAA +
Preference number: 5 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLPSSSD*ISELPE
Trigger: TTCTGGTAGCTCTGAGATCAAATCCGACGACGAGGG...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAGAAGATTTTGTGTCTaGCAGGTTCTCATCGCCCTC +
Preference number: 5 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLRRFCV*QVLIAL
Trigger: GAGGGCGATGAGAACCTGCAAGACACAAAATCTTCT...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGTCCTTGAAAGCCTCGTaGATATCTCGGACCCTCAGG +
Preference number: 5 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLSLKAS*ISRTLR
Trigger: CCTGAGGGTCCGAGATATCAACGAGGCTTTCAAGGA...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp ATGTATTCAGAAACGTCTCGGTCACTGCACACTACTTCGGCTACACAGGTAGGTATACGGCCAAGCTCCTaGAAAGCCTCGTTGATATCT +
Preference number: 5 (lower is better)
Translates to: MYSETSRSLHTTSATQVGIRPSS*KASLIS
Trigger: AGATATCAACGAGGCTTTCAAGGAGCTTGGCCGTAT...ACCTACCTGTGTAGCCGAAGTAGTGTGCAGTGACCGAGACGTTTCTGAATACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTATTCCTTTCTCGAACTaGCTGCTCCAGGCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSIPFSN*LLQAED
Trigger: ATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAGGAAT...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTAAATCACTCAGCTCTTaGTCCGTCCCTAAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLKSLSS*SVPKAA
Trigger: GGCTGCCTTAGGGACGGACAAAGAGCTGAGTGATTT...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202116.4
ENSMUST00000202610.4
ENSMUST00000202772.4
CDS-3UTR CAA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACACCGAGGCCTGGCATTTaGTGCACGCCAGCATCACTT +
Preference number: 5 (lower is better)
Translates to: LKPLASAIHNYSDLSYITPRPGI*CTPASL
Trigger: AAGTGATGCTGGCGTGCACAAAATGCCAGGCCTCGG...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000066717.12
CDS-3UTR CAA 90 bp TTCCAAAAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCAAAGGTGGAGAGAGATaGTCATGTGACCCAAGATCC +
Preference number: 5 (lower is better)
Translates to: FQKKFRHKCIAPQCGRIAKGGER*SCDPRS
Trigger: GGATCTTGGGTCACATGACAATCTCTCTCCACCTTT...GGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTTTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp TTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTCTTTGTATTCTGGAATaGACAAAAGGTGGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: FSLWAVSQPVHTASHIQSLCILE*TKGGER
Trigger: TCTCTCTCCACCTTTTGTCAATTCCAGAATACAAAG...ACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGAAAGGGTTCCTGGATaGCCCATATCCATGTCCCCT +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDERVPG*PISMSP
Trigger: AGGGGACATGGATATGGGCAATCCAGGAACCCTTTC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGAAAGGGTTCCTGGATaGCCCATATCCATGTCCCCT +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLERVPG*PISMSP
Trigger: AGGGGACATGGATATGGGCAATCCAGGAACCCTTTC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTACTGGGAGCCAGGTTaGGTGGGCGAAAGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLYWEPG*VGERVP
Trigger: AGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGTA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACATACTGGGAGCCAGGTTaGGTGGGCGAAAGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: LKPLASAIHNYSDLSYITYWEPG*VGERVP
Trigger: AGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGTA...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTCTTTTCGGACTTTCTTaGTCTGTACCTCCATGGCAC +
Preference number: 5 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSLFGLS*SVPPWH
Trigger: GTGCCATGGAGGTACAGACAAAGAAAGTCCGAAAAG...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp TTCCAAAAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCCTTTTCGGACTTTCTTaGTCTGTACCTCCATGGCAC +
Preference number: 5 (lower is better)
Translates to: FQKKFRHKCIAPQCGRIALFGLS*SVPPWH
Trigger: GTGCCATGGAGGTACAGACAAAGAAAGTCCGAAAAG...GGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTTTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGCTGTGATGGCCATCTaGCATGAAGAAGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLAVMAI*HEEGAR
Trigger: CCTAGCTCCTTCTTCATGCAAGATGGCCATCACAGC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGCTGTGATGGCCATCTaGCATGAAGAAGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDAVMAI*HEEGAR
Trigger: CCTAGCTCCTTCTTCATGCAAGATGGCCATCACAGC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GAAACACTAGCTGACGTGAATACCAACAAAAACGTTCATGTCGTTTTCTTCAGAGGAGGAAGACTGGAGTaGATGTCTGCCGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: ETLADVNTNKNVHVVFFRGGRLE*MSAEEW
Trigger: CCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCC...TCTGAAGAAAACGACATGAACGTTTTTGTTGGTATTCACGTCAGCTAGTGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAGGAGGAAGACTGGAGTaGATGTCTGCCGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: LKPLASAIHNYSDLSYITGGRLE*MSAEEW
Trigger: CCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCC...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGGAGGAAGACTGGAGTaGATGTCTGCCGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLGGRLE*MSAEEW
Trigger: CCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGAGGTGCTGTAATGGTTaGTGCCACTACGATGGAACG +
Preference number: 5 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLRCCNG*CHYDGT
Trigger: CGTTCCATCGTAGTGGCACAAACCATTACAGCACCT...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGCCCCAGTTCCTCTGTTaGCCATTATACTGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQPQFLC*PLYCLF
Trigger: GAACAGACAGTATAATGGCAAACAGAGGAACTGGGG...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGAGACTGGACCGGAAGTaGTGGGACCGGAACCTGGTT +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLRLDRK*WDRNLV
Trigger: AACCAGGTTCCGGTCCCACAACTTCCGGTCCAGTCT...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTCAAGTCAGGGGAAGTaGCAGACTGGACCGGAAGTT +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLSSQGK*QTGPEV
Trigger: AACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTGA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTCAAGTCAGGGGAAGTaGCAGACTGGACCGGAAGTT +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDSSQGK*QTGPEV
Trigger: AACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTGA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GAAACACTAGCTGACGTGAATACCAACAAAAACGTTCATGTCGTTTTCTTCAGACCCTCTGTAAGGGTCTaGGGGTGGGTTCAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: ETLADVNTNKNVHVVFFRPSVRV*GWVQVR
Trigger: CCTGACTTGAACCCACCCCAAGACCCTTACAGAGGG...TCTGAAGAAAACGACATGAACGTTTTTGTTGGTATTCACGTCAGCTAGTGTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACACCCTCTGTAAGGGTCTaGGGGTGGGTTCAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: LKPLASAIHNYSDLSYITPSVRV*GWVQVR
Trigger: CCTGACTTGAACCCACCCCAAGACCCTTACAGAGGG...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCCCTCTGTAAGGGTCTaGGGGTGGGTTCAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLPSVRV*GWVQVR
Trigger: CCTGACTTGAACCCACCCCAAGACCCTTACAGAGGG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCCCTCGTCGTCGGATTaGATCTCAGAGCTACCAGAA +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDPSSSD*ISELPE
Trigger: TTCTGGTAGCTCTGAGATCAAATCCGACGACGAGGG...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCCCTCGTCGTCGGATTaGATCTCAGAGCTACCAGAA +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLPSSSD*ISELPE
Trigger: TTCTGGTAGCTCTGAGATCAAATCCGACGACGAGGG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp TTCCAAAAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCAGAAGATTTTGTGTCTaGCAGGTTCTCATCGCCCTC +
Preference number: 5 (lower is better)
Translates to: FQKKFRHKCIAPQCGRIARRFCV*QVLIAL
Trigger: GAGGGCGATGAGAACCTGCAAGACACAAAATCTTCT...GGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTTTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAGAAGATTTTGTGTCTaGCAGGTTCTCATCGCCCTC +
Preference number: 5 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLRRFCV*QVLIAL
Trigger: GAGGGCGATGAGAACCTGCAAGACACAAAATCTTCT...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGAGAAGATTTTGTGTCTaGCAGGTTCTCATCGCCCTC +
Preference number: 5 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQRRFCV*QVLIAL
Trigger: GAGGGCGATGAGAACCTGCAAGACACAAAATCTTCT...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTAGAAGATTTTGTGTCTaGCAGGTTCTCATCGCCCTC +
Preference number: 5 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSRRFCV*QVLIAL
Trigger: GAGGGCGATGAGAACCTGCAAGACACAAAATCTTCT...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCAGACCTAGTAATTGATTaGATATCCTTCTTGTCGTCA +
Preference number: 5 (lower is better)
Translates to: RIAIQSLGCVSACTYRFADLVID*ISFLSS
Trigger: TGACGACAAGAAGGATATCAAATCAATTACTAGGTC...TGCGAAGCGGTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114978.9
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp CAGTGTGGGAGGATTGCCATTCAGTCTCTGGGCTGTGTCTCAGCCTGTACATACGACCTAGTAATTGATTaGATATCCTTCTTGTCGTCA +
Preference number: 5 (lower is better)
Translates to: QCGRIAIQSLGCVSACTYDLVID*ISFLSS
Trigger: TGACGACAAGAAGGATATCAAATCAATTACTAGGTC...GTATGTACAGGCTGAGACACAGCCCAGAGACTGAATGGCAATCCTCCCACACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114978.9
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCGCTCACGGGCATTATaGGCCATCCTCCGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLRSRAL*AILRSF
Trigger: GAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTCCTTGAAAGCCTCGTaGATATCTCGGACCCTCAGG +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDSLKAS*ISRTLR
Trigger: CCTGAGGGTCCGAGATATCAACGAGGCTTTCAAGGA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTCCTTGAAAGCCTCGTaGATATCTCGGACCCTCAGG +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLSLKAS*ISRTLR
Trigger: CCTGAGGGTCCGAGATATCAACGAGGCTTTCAAGGA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp CCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCATACGGCCAAGCTCCTaGAAAGCCTCGTTGATATCT +
Preference number: 5 (lower is better)
Translates to: PVHTASHIQSDMLKKSSLIRPSS*KASLIS
Trigger: AGATATCAACGAGGCTTTCAAGGAGCTTGGCCGTAT...GAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGATTCCTTTCTCGAACTaGCTGCTCCAGGCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLIPFSN*LLQAED
Trigger: ATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAGGAAT...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS TCA 90 bp ACTTTGTATTCTGGAATTGACAAAAGGTGGAGAGAGATTGTCATGTaGCCCAAGATCCCTGCTAGTCATGTGGTCATAGGGAGTCCCATC +
Preference number: 5 (lower is better)
Translates to: TLYSGIDKRWREIVM*PKIPASHVVIGSPI
Trigger: GATGGGACTCCCTATGACCACATGACTAGCAGGGATCTTGGGTCACATGACAATCTCTCTCCACCTTTTGTCAATTCCAGAATACAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000128706.8
ENSMUST00000201235.4
ENSMUST00000201288.4
ENSMUST00000201299.4
ENSMUST00000201537.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202074.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000203002.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCACTCGCCAAAGAAGTaGGTCCATTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLHSPKK*VHFSHC
Trigger: GCAGTGGGAAAAATGGACCAACTTCTTTGGCGAGTG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCACTCGCCAAAGAAGTaGGTCCATTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDHSPKK*VHFSHC
Trigger: GCAGTGGGAAAAATGGACCAACTTCTTTGGCGAGTG...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR CAA 90 bp ACTGCGTTACCCCTCCTCACAAAAGTGCAACTTAATGCTTTAGGGCTTATAAGGAAAGGTGGAGAGAGATaGTCATGTGACCCAAGATCC +
Preference number: 5 (lower is better)
Translates to: TALPLLTKVQLNALGLIRKGGER*SCDPRS
Trigger: GGATCTTGGGTCACATGACAATCTCTCTCCACCTTT...CCTTATAAGCCCTAAAGCATTAAGTTGCACTTTTGTGAGGAGGGGTAACGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp AGCCTCACTTTTGCAAACAGTGACCACCTTTGCAGCTCTTATTCATCAACCTCTAAAGGTGGAGAGAGATaGTCATGTGACCCAAGATCC +
Preference number: 5 (lower is better)
Translates to: SLTFANSDHLCSSYSSTSKGGER*SCDPRS
Trigger: GGATCTTGGGTCACATGACAATCTCTCTCCACCTTT...AGAGGTTGATGAATAAGAGCTGCAAAGGTGGTCACTGTTTGCAAAAGTGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR CAA 90 bp TATGTTTCCGATGATATAAACATTGGAAGGCACAGTGGTAACATTGTAGCATTCTACTGGGAGCCAGGTTaGGTGGGCGAAAGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: YVSDDINIGRHSGNIVAFYWEPG*VGERVP
Trigger: AGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGTA...GAATGCTACAATGTTACCACTGTGCCTTCCAATGTTTATATCATCGGAAACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACAGGTGCTGTAATGGTTaGTGCCACTACGATGGAACG +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDRCCNG*CHYDGT
Trigger: CGTTCCATCGTAGTGGCACAAACCATTACAGCACCT...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTAGGTGCTGTAATGGTTaGTGCCACTACGATGGAACG +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLRCCNG*CHYDGT
Trigger: CGTTCCATCGTAGTGGCACAAACCATTACAGCACCT...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GAAACACTAGCTGACGTGAATACCAACAAAAACGTTCATGTCGTTTTCTTCAGAATACTGTCTGTTCCGTaGGCAGGGGGTGTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: ETLADVNTNKNVHVVFFRILSVP*AGGVQE
Trigger: TTCCTGCACACCCCCTGCCAACGGAACAGACAGTAT...TCTGAAGAAAACGACATGAACGTTTTTGTTGGTATTCACGTCAGCTAGTGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAATACTGTCTGTTCCGTaGGCAGGGGGTGTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: LKPLASAIHNYSDLSYITILSVP*AGGVQE
Trigger: TTCCTGCACACCCCCTGCCAACGGAACAGACAGTAT...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGATACTGTCTGTTCCGTaGGCAGGGGGTGTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLILSVP*AGGVQE
Trigger: TTCCTGCACACCCCCTGCCAACGGAACAGACAGTAT...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGCCCCAGTTCCTCTGTTaGCCATTATACTGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLPQFLC*PLYCLF
Trigger: GAACAGACAGTATAATGGCAAACAGAGGAACTGGGG...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGGGAGCCCACAGGAGTaGAAGGATTGGAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLGSPQE*KDWRKS
Trigger: GCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCCC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAACTACCCATCGCTCCGTaGTGGGAGGGTCCCATGATC +
Preference number: 5 (lower is better)
Translates to: KPLASAIHNYSDLSYITKLPIAP*WEGPMI
Trigger: GATCATGGGACCCTCCCACAACGGAGCGATGGGTAG...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGGACCGGAACCTGGTTaGGCAGGAGAGAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: KPLASAIHNYSDLSYITKGPEPG*AGENGC
Trigger: GCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTCC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp ATATATATTTGTCATAGGTCTATAACATCCATCTGTCCCTCCTACCCTAAGGAAAGACTGGACCGGAAGTaGTGGGACCGGAACCTGGTT +
Preference number: 5 (lower is better)
Translates to: IYICHRSITSICPSYPKERLDRK*WDRNLV
Trigger: AACCAGGTTCCGGTCCCACAACTTCCGGTCCAGTCT...TTCCTTAGGGTAGGAGGGACAGATGGATGTTATAGACCTATGACAAATATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGAGAAGATTTTGTGTCTaGCAGGTTCTCATCGCCCTC +
Preference number: 5 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLRRFCV*QVLIAL
Trigger: GAGGGCGATGAGAACCTGCAAGACACAAAATCTTCT...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGATACGGCCAAGCTCCTaGAAAGCCTCGTTGATATCT +
Preference number: 5 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLIRPSS*KASLIS
Trigger: AGATATCAACGAGGCTTTCAAGGAGCTTGGCCGTAT...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACATTCCTTTCTCGAACTaGCTGCTCCAGGCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDIPFSN*LLQAED
Trigger: ATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAGGAAT...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTATTCCTTTCTCGAACTaGCTGCTCCAGGCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLIPFSN*LLQAED
Trigger: ATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAGGAAT...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS GCA 90 bp TTCTTGTCGTCATCTAATTTCTTGTCCTCAGAAGATTTTGTGTCTTaGAGGTTCTCATCGCCCTCGTCGTCGGATTTGATCTCAGAGCTA +
Preference number: 5 (lower is better)
Translates to: FLSSSNFLSSEDFVS*RFSSPSSSDLISEL
Trigger: TAGCTCTGAGATCAAATCCGACGACGAGGGCGATGAGAACCTGCAAGACACAAAATCTTCTGAGGACAAGAAATTAGATGACGACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTAAAGGTGGAGAGAGATaGTCATGTGACCCAAGATCC +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLKGGER*SCDPRS
Trigger: GGATCTTGGGTCACATGACAATCTCTCTCCACCTTT...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACAAAGGTGGAGAGAGATaGTCATGTGACCCAAGATCC +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDKGGER*SCDPRS
Trigger: GGATCTTGGGTCACATGACAATCTCTCTCCACCTTT...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR CAA 90 bp ATTTCCTGTGATCATAACCAACTTTTCCTAGGTCAGGACCTGGGGCATCGCATCCTTTGTATTCTGGAATaGACAAAAGGTGGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: ISCDHNQLFLGQDLGHRILCILE*TKGGER
Trigger: TCTCTCTCCACCTTTTGTCAATTCCAGAATACAAAG...GATGCGATGCCCCAGGTCCTGACCTAGGAAAAGTTGGTTATGATCACAGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS-3UTR CAA 90 bp TGGGCTGTGTCTCAGCCTGTACATACCGCTTCGCACATTCAGAGTGATATGTTACTTTGTATTCTGGAATaGACAAAAGGTGGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: WAVSQPVHTASHIQSDMLLCILE*TKGGER
Trigger: TCTCTCTCCACCTTTTGTCAATTCCAGAATACAAAG...TAACATATCACTCTGAATGTGCGAAGCGGTATGTACAGGCTGAGACACAGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGAAAGGGTTCCTGGATaGCCCATATCCATGTCCCCT +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLERVPG*PISMSP
Trigger: AGGGGACATGGATATGGGCAATCCAGGAACCCTTTC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
CDS-3UTR CAA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAATACTGGGAGCCAGGTTaGGTGGGCGAAAGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: KPLASAIHNYSDLSYITKYWEPG*VGERVP
Trigger: AGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGTA...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTTCGGACTTTCTTaGTCTGTACCTCCATGGCAC +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDLFGLS*SVPPWH
Trigger: GTGCCATGGAGGTACAGACAAAGAAAGTCCGAAAAG...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAGCTGTGATGGCCATCTaGCATGAAGAAGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: LKPLASAIHNYSDLSYITAVMAI*HEEGAR
Trigger: CCTAGCTCCTTCTTCATGCAAGATGGCCATCACAGC...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGCTGTGATGGCCATCTaGCATGAAGAAGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLAVMAI*HEEGAR
Trigger: CCTAGCTCCTTCTTCATGCAAGATGGCCATCACAGC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGGAGGAAGACTGGAGTaGATGTCTGCCGAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: KPLASAIHNYSDLSYITKGGRLE*MSAEEW
Trigger: CCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCCCCAGTTCCTCTGTTaGCCATTATACTGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLPQFLC*PLYCLF
Trigger: GAACAGACAGTATAATGGCAAACAGAGGAACTGGGG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCCCCAGTTCCTCTGTTaGCCATTATACTGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDPQFLC*PLYCLF
Trigger: GAACAGACAGTATAATGGCAAACAGAGGAACTGGGG...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTATGAGCGAGTGTCTGTaGGCTGAGAGAAGACTAGTT +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLMSECL*AERRLV
Trigger: AACTAGTCTTCTCTCAGCCAACAGACACTCGCTCAT...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACATGAGCGAGTGTCTGTaGGCTGAGAGAAGACTAGTT +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDMSECL*AERRLV
Trigger: AACTAGTCTTCTCTCAGCCAACAGACACTCGCTCAT...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAAGACTGGACCGGAAGTaGTGGGACCGGAACCTGGTT +
Preference number: 5 (lower is better)
Translates to: KPLASAIHNYSDLSYITKRLDRK*WDRNLV
Trigger: AACCAGGTTCCGGTCCCACAACTTCCGGTCCAGTCT...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GAAACACTAGCTGACGTGAATACCAACAAAAACGTTCATGTCGTTTTCTTCAGATCAAGTCAGGGGAAGTaGCAGACTGGACCGGAAGTT +
Preference number: 5 (lower is better)
Translates to: ETLADVNTNKNVHVVFFRSSQGK*QTGPEV
Trigger: AACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTGA...TCTGAAGAAAACGACATGAACGTTTTTGTTGGTATTCACGTCAGCTAGTGTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTCAAGTCAGGGGAAGTaGCAGACTGGACCGGAAGTT +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLSSQGK*QTGPEV
Trigger: AACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTGA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACATCAAGTCAGGGGAAGTaGCAGACTGGACCGGAAGTT +
Preference number: 5 (lower is better)
Translates to: LKPLASAIHNYSDLSYITSSQGK*QTGPEV
Trigger: AACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTGA...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAACCCTCTGTAAGGGTCTaGGGGTGGGTTCAAGTCAGG +
Preference number: 5 (lower is better)
Translates to: KPLASAIHNYSDLSYITKPSVRV*GWVQVR
Trigger: CCTGACTTGAACCCACCCCAAGACCCTTACAGAGGG...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCCCTCGTCGTCGGATTaGATCTCAGAGCTACCAGAA +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLPSSSD*ISELPE
Trigger: TTCTGGTAGCTCTGAGATCAAATCCGACGACGAGGG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACACCCTCGTCGTCGGATTaGATCTCAGAGCTACCAGAA +
Preference number: 5 (lower is better)
Translates to: LKPLASAIHNYSDLSYITPSSSD*ISELPE
Trigger: TTCTGGTAGCTCTGAGATCAAATCCGACGACGAGGG...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTAGAAGATTTTGTGTCTaGCAGGTTCTCATCGCCCTC +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLRRFCV*QVLIAL
Trigger: GAGGGCGATGAGAACCTGCAAGACACAAAATCTTCT...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACAGAAGATTTTGTGTCTaGCAGGTTCTCATCGCCCTC +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDRRFCV*QVLIAL
Trigger: GAGGGCGATGAGAACCTGCAAGACACAAAATCTTCT...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp CTCGCCCGGGCAATGCTGCATGTAATTCCTACACATGATGTGACTTTTAAGTCCTCCTCATCATCGTTATaGCTAGATCTTGACCTAGTA +
Preference number: 5 (lower is better)
Translates to: LARAMLHVIPTHDVTFKSSSSSL*LDLDLV
Trigger: TACTAGGTCAAGATCTAGCAATAACGATGATGAGGA...GGACTTAAAAGTCACATCATGTGTAGGAATTACATGCAGCATTGCCCGGGCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAACGCTCACGGGCATTATaGGCCATCCTCCGTTCCTTC +
Preference number: 5 (lower is better)
Translates to: KPLASAIHNYSDLSYITKRSRAL*AILRSF
Trigger: GAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCG...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACATCCTTGAAAGCCTCGTaGATATCTCGGACCCTCAGG +
Preference number: 5 (lower is better)
Translates to: LKPLASAIHNYSDLSYITSLKAS*ISRTLR
Trigger: CCTGAGGGTCCGAGATATCAACGAGGCTTTCAAGGA...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGTCCTTGAAAGCCTCGTaGATATCTCGGACCCTCAGG +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLSLKAS*ISRTLR
Trigger: CCTGAGGGTCCGAGATATCAACGAGGCTTTCAAGGA...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTATACGGCCAAGCTCCTaGAAAGCCTCGTTGATATCT +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLIRPSS*KASLIS
Trigger: AGATATCAACGAGGCTTTCAAGGAGCTTGGCCGTAT...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACATACGGCCAAGCTCCTaGAAAGCCTCGTTGATATCT +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDIRPSS*KASLIS
Trigger: AGATATCAACGAGGCTTTCAAGGAGCTTGGCCGTAT...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp ATATATATTTGTCATAGGTCTATAACATCCATCTGTCCCTCCTACCCTAAGGAAAAATCACTCAGCTCTTaGTCCGTCCCTAAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: IYICHRSITSICPSYPKEKSLSS*SVPKAA
Trigger: GGCTGCCTTAGGGACGGACAAAGAGCTGAGTGATTT...TTCCTTAGGGTAGGAGGGACAGATGGATGTTATAGACCTATGACAAATATATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACACACTCGCCAAAGAAGTaGGTCCATTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: LKPLASAIHNYSDLSYITHSPKK*VHFSHC
Trigger: GCAGTGGGAAAAATGGACCAACTTCTTTGGCGAGTG...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202674.4
CDS-3UTR CAA 90 bp AAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGCTTTGTATTCTGGAATaGACAAAAGGTGGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: KKFRHKCIAPQCGRIAIQLCILE*TKGGER
Trigger: TCTCTCTCCACCTTTTGTCAATTCCAGAATACAAAG...CTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS-3UTR CAA 90 bp ATATATATTTGTCATAGGTCTATAACATCCATCTGTCCCTCCTACCCTAAGGAAGAAAGGGTTCCTGGATaGCCCATATCCATGTCCCCT +
Preference number: 5 (lower is better)
Translates to: IYICHRSITSICPSYPKEERVPG*PISMSP
Trigger: AGGGGACATGGATATGGGCAATCCAGGAACCCTTTC...TTCCTTAGGGTAGGAGGGACAGATGGATGTTATAGACCTATGACAAATATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp ATATATATTTGTCATAGGTCTATAACATCCATCTGTCCCTCCTACCCTAAGGAAGCTGTGATGGCCATCTaGCATGAAGAAGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: IYICHRSITSICPSYPKEAVMAI*HEEGAR
Trigger: CCTAGCTCCTTCTTCATGCAAGATGGCCATCACAGC...TTCCTTAGGGTAGGAGGGACAGATGGATGTTATAGACCTATGACAAATATATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp TATGTTTCCGATGATATAAACATTGGAAGGCACAGTGGTAACATTGTAGCATTCGCTGTGATGGCCATCTaGCATGAAGAAGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: YVSDDINIGRHSGNIVAFAVMAI*HEEGAR
Trigger: CCTAGCTCCTTCTTCATGCAAGATGGCCATCACAGC...GAATGCTACAATGTTACCACTGTGCCTTCCAATGTTTATATCATCGGAAACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAGGTGCTGTAATGGTTaGTGCCACTACGATGGAACG +
Preference number: 5 (lower is better)
Translates to: LKPLASAIHNYSDLSYITRCCNG*CHYDGT
Trigger: CGTTCCATCGTAGTGGCACAAACCATTACAGCACCT...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGAGGTGCTGTAATGGTTaGTGCCACTACGATGGAACG +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLRCCNG*CHYDGT
Trigger: CGTTCCATCGTAGTGGCACAAACCATTACAGCACCT...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAATACTGTCTGTTCCGTaGGCAGGGGGTGTGCAGGAA +
Preference number: 5 (lower is better)
Translates to: KPLASAIHNYSDLSYITKILSVP*AGGVQE
Trigger: TTCCTGCACACCCCCTGCCAACGGAACAGACAGTAT...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGGGAGCCCACAGGAGTaGAAGGATTGGAGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: KPLASAIHNYSDLSYITKGSPQE*KDWRKS
Trigger: GCTTTTCCTCCAATCCTTCAACTCCTGTGGGCTCCC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp TTCCAAAAGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCTCCTCATCATCGTTATaGCTAGATCTTGACCTAGTA +
Preference number: 5 (lower is better)
Translates to: FQKKFRHKCIAPQCGRIASSSSL*LDLDLV
Trigger: TACTAGGTCAAGATCTAGCAATAACGATGATGAGGA...GGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCTTTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114978.9
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAATTCCTTTCTCGAACTaGCTGCTCCAGGCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: LKPLASAIHNYSDLSYITIPFSN*LLQAED
Trigger: ATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAGGAAT...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGAAAGGTGGAGAGAGATaGTCATGTGACCCAAGATCC +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLKGGER*SCDPRS
Trigger: GGATCTTGGGTCACATGACAATCTCTCTCCACCTTT...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR CAA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGAAAGGGTTCCTGGATaGCCCATATCCATGTCCCCT +
Preference number: 5 (lower is better)
Translates to: KPLASAIHNYSDLSYITKERVPG*PISMSP
Trigger: AGGGGACATGGATATGGGCAATCCAGGAACCCTTTC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCTTTTCGGACTTTCTTaGTCTGTACCTCCATGGCAC +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLLFGLS*SVPPWH
Trigger: GTGCCATGGAGGTACAGACAAAGAAAGTCCGAAAAG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACACTTTTCGGACTTTCTTaGTCTGTACCTCCATGGCAC +
Preference number: 5 (lower is better)
Translates to: LKPLASAIHNYSDLSYITLFGLS*SVPPWH
Trigger: GTGCCATGGAGGTACAGACAAAGAAAGTCCGAAAAG...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAGCTGTGATGGCCATCTaGCATGAAGAAGGAGCTAGG +
Preference number: 5 (lower is better)
Translates to: KPLASAIHNYSDLSYITKAVMAI*HEEGAR
Trigger: CCTAGCTCCTTCTTCATGCAAGATGGCCATCACAGC...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCCCCAGTTCCTCTGTTaGCCATTATACTGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLPQFLC*PLYCLF
Trigger: GAACAGACAGTATAATGGCAAACAGAGGAACTGGGG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGATGAGCGAGTGTCTGTaGGCTGAGAGAAGACTAGTT +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLMSECL*AERRLV
Trigger: AACTAGTCTTCTCTCAGCCAACAGACACTCGCTCAT...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAATCAAGTCAGGGGAAGTaGCAGACTGGACCGGAAGTT +
Preference number: 5 (lower is better)
Translates to: KPLASAIHNYSDLSYITKSSQGK*QTGPEV
Trigger: AACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTGA...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAACCCTCGTCGTCGGATTaGATCTCAGAGCTACCAGAA +
Preference number: 5 (lower is better)
Translates to: KPLASAIHNYSDLSYITKPSSSD*ISELPE
Trigger: TTCTGGTAGCTCTGAGATCAAATCCGACGACGAGGG...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGAGAAGATTTTGTGTCTaGCAGGTTCTCATCGCCCTC +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLRRFCV*QVLIAL
Trigger: GAGGGCGATGAGAACCTGCAAGACACAAAATCTTCT...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAGAAGATTTTGTGTCTaGCAGGTTCTCATCGCCCTC +
Preference number: 5 (lower is better)
Translates to: LKPLASAIHNYSDLSYITRRFCV*QVLIAL
Trigger: GAGGGCGATGAGAACCTGCAAGACACAAAATCTTCT...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AGAAGTTTAGGCACAAATGCATTGCTCCACAGTGTGGGAGGATTGCCATTCAGTGACCTAGTAATTGATTaGATATCCTTCTTGTCGTCA +
Preference number: 5 (lower is better)
Translates to: RSLGTNALLHSVGGLPFSDLVID*ISFLSS
Trigger: TGACGACAAGAAGGATATCAAATCAATTACTAGGTC...ACTGAATGGCAATCCTCCCACACTGTGGAGCAATGCATTTGTGCCTAAACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114978.9
ENSMUST00000114985.10
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp CATACCGCTTCGCACATTCAGAGTGATATGTTAAAGAAGTCGTCCCTCAAGTTGTCCTCATCATCGTTATaGCTAGATCTTGACCTAGTA +
Preference number: 5 (lower is better)
Translates to: HTASHIQSDMLKKSSLKLSSSSL*LDLDLV
Trigger: TACTAGGTCAAGATCTAGCAATAACGATGATGAGGA...CAACTTGAGGGACGACTTCTTTAACATATCACTCTGAATGTGCGAAGCGGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114978.9
ENSMUST00000114985.10
ENSMUST00000201781.4
ENSMUST00000202435.4
CDS-3UTR CAA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAATCCTTGAAAGCCTCGTaGATATCTCGGACCCTCAGG +
Preference number: 5 (lower is better)
Translates to: KPLASAIHNYSDLSYITKSLKAS*ISRTLR
Trigger: CCTGAGGGTCCGAGATATCAACGAGGCTTTCAAGGA...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGATACGGCCAAGCTCCTaGAAAGCCTCGTTGATATCT +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLIRPSS*KASLIS
Trigger: AGATATCAACGAGGCTTTCAAGGAGCTTGGCCGTAT...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 22 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAATACGGCCAAGCTCCTaGAAAGCCTCGTTGATATCT +
Preference number: 5 (lower is better)
Translates to: LKPLASAIHNYSDLSYITIRPSS*KASLIS
Trigger: AGATATCAACGAGGCTTTCAAGGAGCTTGGCCGTAT...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTCTTTGTATTCTGGAATaGACAAAAGGTGGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLLCILE*TKGGER
Trigger: TCTCTCTCCACCTTTTGTCAATTCCAGAATACAAAG...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR CAA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAAGGTGCTGTAATGGTTaGTGCCACTACGATGGAACG +
Preference number: 5 (lower is better)
Translates to: KPLASAIHNYSDLSYITKRCCNG*CHYDGT
Trigger: CGTTCCATCGTAGTGGCACAAACCATTACAGCACCT...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp TATGTTTCCGATGATATAAACATTGGAAGGCACAGTGGTAACATTGTAGCATTCCCCCAGTTCCTCTGTTaGCCATTATACTGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: YVSDDINIGRHSGNIVAFPQFLC*PLYCLF
Trigger: GAACAGACAGTATAATGGCAAACAGAGGAACTGGGG...GAATGCTACAATGTTACCACTGTGCCTTCCAATGTTTATATCATCGGAAACATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACTCCTCATCATCGTTATaGCTAGATCTTGACCTAGTA +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDSSSSL*LDLDLV
Trigger: TACTAGGTCAAGATCTAGCAATAACGATGATGAGGA...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114985.10
ENSMUST00000201205.4
ENSMUST00000201781.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTTCCTCATCATCGTTATaGCTAGATCTTGACCTAGTA +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLSSSSL*LDLDLV
Trigger: TACTAGGTCAAGATCTAGCAATAACGATGATGAGGA...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114985.10
ENSMUST00000201205.4
ENSMUST00000201781.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAATTCCTTTCTCGAACTaGCTGCTCCAGGCTGAGGAT +
Preference number: 5 (lower is better)
Translates to: KPLASAIHNYSDLSYITKIPFSN*LLQAED
Trigger: ATCCTCAGCCTGGAGCAGCAAGTTCGAGAAAGGAAT...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAAAAGGTGGAGAGAGATaGTCATGTGACCCAAGATCC +
Preference number: 5 (lower is better)
Translates to: KPLASAIHNYSDLSYITKKGGER*SCDPRS
Trigger: GGATCTTGGGTCACATGACAATCTCTCTCCACCTTT...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
CDS-3UTR CAA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAACCCCAGTTCCTCTGTTaGCCATTATACTGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: KPLASAIHNYSDLSYITKPQFLC*PLYCLF
Trigger: GAACAGACAGTATAATGGCAAACAGAGGAACTGGGG...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAATGAGCGAGTGTCTGTaGGCTGAGAGAAGACTAGTT +
Preference number: 5 (lower is better)
Translates to: KPLASAIHNYSDLSYITKMSECL*AERRLV
Trigger: AACTAGTCTTCTCTCAGCCAACAGACACTCGCTCAT...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAAGAAGATTTTGTGTCTaGCAGGTTCTCATCGCCCTC +
Preference number: 5 (lower is better)
Translates to: KPLASAIHNYSDLSYITKRRFCV*QVLIAL
Trigger: GAGGGCGATGAGAACCTGCAAGACACAAAATCTTCT...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp GCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTTGACCTAGTAATTGATTaGATATCCTTCTTGTCGTCA +
Preference number: 5 (lower is better)
Translates to: AVKEVVSCLMKQGSNLDLDLVID*ISFLSS
Trigger: TGACGACAAGAAGGATATCAAATCAATTACTAGGTC...AAGGTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114985.10
ENSMUST00000201205.4
ENSMUST00000201781.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp ACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACGACCTAGTAATTGATTaGATATCCTTCTTGTCGTCA +
Preference number: 5 (lower is better)
Translates to: TAVKEVVSCLMKQGSNLDDLVID*ISFLSS
Trigger: TGACGACAAGAAGGATATCAAATCAATTACTAGGTC...GTCCAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114985.10
ENSMUST00000201205.4
ENSMUST00000201781.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAAAAATACGGCCAAGCTCCTaGAAAGCCTCGTTGATATCT +
Preference number: 5 (lower is better)
Translates to: KPLASAIHNYSDLSYITKIRPSS*KASLIS
Trigger: AGATATCAACGAGGCTTTCAAGGAGCTTGGCCGTAT...TTTTGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACACTTTGTATTCTGGAATaGACAAAAGGTGGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: LKPLASAIHNYSDLSYITLCILE*TKGGER
Trigger: TCTCTCTCCACCTTTTGTCAATTCCAGAATACAAAG...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGCTTTGTATTCTGGAATaGACAAAAGGTGGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLLCILE*TKGGER
Trigger: TCTCTCTCCACCTTTTGTCAATTCCAGAATACAAAG...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS-3UTR CAA 90 bp TATGTTTCCGATGATATAAACATTGGAAGGCACAGTGGTAACATTGTAGCATTCCTTTGTATTCTGGAATaGACAAAAGGTGGAGAGAGA +
Preference number: 5 (lower is better)
Translates to: YVSDDINIGRHSGNIVAFLCILE*TKGGER
Trigger: TCTCTCTCCACCTTTTGTCAATTCCAGAATACAAAG...GAATGCTACAATGTTACCACTGTGCCTTCCAATGTTTATATCATCGGAAACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114982.8
ENSMUST00000114985.10
CDS-3UTR CAA 90 bp CTGAAACCTCTTGCGTCTGCGATTCATAACTACTCAGACTTGTCTTATATTACAGACCTAGTAATTGATTaGATATCCTTCTTGTCGTCA +
Preference number: 5 (lower is better)
Translates to: LKPLASAIHNYSDLSYITDLVID*ISFLSS
Trigger: TGACGACAAGAAGGATATCAAATCAATTACTAGGTC...TGTAATATAAGACAAGTCTGAGTAGTTATGAATCGCAGACGCAAGAGGTTTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114978.9
ENSMUST00000114985.10
ENSMUST00000201205.4
ENSMUST00000201781.4
ENSMUST00000202435.4
ENSMUST00000202937.4
CDS-3UTR CAA 90 bp AATACAGCTGTTAAGGAAGTGGTCTCTTGTTTAATGAAGCAAGGTAGCAACTTGGACCTAGTAATTGATTaGATATCCTTCTTGTCGTCA +
Preference number: 5 (lower is better)
Translates to: NTAVKEVVSCLMKQGSNLDLVID*ISFLSS
Trigger: TGACGACAAGAAGGATATCAAATCAATTACTAGGTC...CAAGTTGCTACCTTGCTTCATTAAACAAGAGACCACTTCCTTAACAGCTGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114985.10
ENSMUST00000201205.4
ENSMUST00000201781.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202937.4
CDS CCA 72 bp TTGTGGGAGGGTCCCATGATCCCATGCATGTCCCCATaGCCACCAGGCACAGCTGTGGACGGGCCCACTGCG +
Preference number: 6 (lower is better)
Translates to: LWEGPMIPCMSP*PPGTAVDGPTA
Trigger: CGCAGTGGGCCCGTCCACAGCTGTGCCTGGTGGCCATGGGGACATGCATGGGATCATGGGACCCTCCCACAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 26 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000200862.4
ENSMUST00000201037.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS GCA 72 bp CCCATGGCCACCAGGCACAGCTGTGGACGGGCCCACTaGGTGGTTCCGGAGAACATGAATCGCATCGTCCAG +
Preference number: 6 (lower is better)
Translates to: PMATRHSCGRAH*VVPENMNRIVQ
Trigger: CTGGACGATGCGATTCATGTTCTCCGGAACCACGCAGTGGGCCCGTCCACAGCTGTGCCTGGTGGCCATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 26 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000200862.4
ENSMUST00000201037.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS GCA 72 bp CCCATCGCTCCGTTGTGGGAGGGTCCCATGATCCCATaGATGTCCCCATGGCCACCAGGCACAGCTGTGGAC +
Preference number: 6 (lower is better)
Translates to: PIAPLWEGPMIP*MSPWPPGTAVD
Trigger: GTCCACAGCTGTGCCTGGTGGCCATGGGGACATGCATGGGATCATGGGACCCTCCCACAACGGAGCGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 26 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000200862.4
ENSMUST00000201037.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS CCA 72 bp CCAGCATCCCTCCGTAGCCGGGCTGATTCATCCCGCTaGAGGAGCTCCAAGGGTCGCTGCTGTGATGGCCAT +
Preference number: 6 (lower is better)
Translates to: PASLRSRADSSR*RSSKGRCCDGH
Trigger: ATGGCCATCACAGCAGCGACCCTTGGAGCTCCTCCAGCGGGATGAATCAGCCCGGCTACGGAGGGATGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 37 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000145918.5
ENSMUST00000200703.4
ENSMUST00000200813.4
ENSMUST00000200862.4
ENSMUST00000200921.4
ENSMUST00000200966.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201124.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000201964.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202350.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202751.4
ENSMUST00000202765.4
ENSMUST00000202772.4
ENSMUST00000202937.4
ENSMUST00000207214.2
ENSMUST00000209174.2
CDS CCA 72 bp CCGTACCCTGAGCCCAGGCTACCCATCGCTCCGTTGTaGGAGGGTCCCATGATCCCATGCATGTCCCCATGG +
Preference number: 6 (lower is better)
Translates to: PYPEPRLPIAPL*EGPMIPCMSPW
Trigger: CCATGGGGACATGCATGGGATCATGGGACCCTCCCACAACGGAGCGATGGGTAGCCTGGGCTCAGGGTACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 25 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000200862.4
ENSMUST00000201037.4
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS CAA 90 bp CACGCTCTGGCCCTGGAGGCCTGGTGGCATCCCTCTGTAAGGGTCTaGGGGTGGGTTCAAGTCAGGGGAAGTTGCAGACTGGACCGGAAG +
Preference number: 6 (lower is better)
Translates to: HALALEAWWHPSVRV*GWVQVRGSCRLDRK
Trigger: CTTCCGGTCCAGTCTGCAACTTCCCCTGACTTGAACCCACCCCAAGACCCTTACAGAGGGATGCCACCAGGCCTCCAGGGCCAGAGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 23 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS TCA 72 bp GCCTGGCGAGTCCCTGTTGTAGTCGGCAGTGCTGGCTaGAGGAGCGTAGACCTCTGCTCTCCCTTCGTGGTC +
Preference number: 6 (lower is better)
Translates to: AWRVPVVVGSAG*RSVDLCSPFVV
Trigger: GACCACGAAGGGAGAGCAGAGGTCTACGCTCCTTCAGCCAGCACTGCCGACTACAACAGGGACTCGCCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202474.4
CDS CCA 72 bp TCCCATGCATGTCCCCATGGCCACCAGGCACAGCTGTaGACGGGCCCACTGCGTGGTTCCGGAGAACATGAA +
Preference number: 6 (lower is better)
Translates to: SHACPHGHQAQL*TGPLRGSGEHE
Trigger: TTCATGTTCTCCGGAACCACGCAGTGGGCCCGTCCACAGCTGTGCCTGGTGGCCATGGGGACATGCATGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 26 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000200862.4
ENSMUST00000201037.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS TCA 72 bp GCCTGGCGAGTCCCTGTTGTAGTCGGCAGTGCTGGCTaGAGGAGCGTAGACCTGGTGGCAACCCTGAACGTT +
Preference number: 6 (lower is better)
Translates to: AWRVPVVVGSAG*RSVDLVATLNV
Trigger: AACGTTCAGGGTTGCCACCAGGTCTACGCTCCTTCAGCCAGCACTGCCGACTACAACAGGGACTCGCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000202610.4
ENSMUST00000202772.4
CDS CCA 72 bp GAATGGCTGCCTCTCAGAGCCACGCCATCTTCACGGTaGGCCCCAACCATGAGCGAGTGTCTGTTGGCTGAG +
Preference number: 6 (lower is better)
Translates to: EWLPLRATPSSR*APTMSECLLAE
Trigger: CTCAGCCAACAGACACTCGCTCATGGTTGGGGCCCACCGTGAAGATGGCGTGGCTCTGAGAGGCAGCCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS CCA 72 bp GAGGCCTGGTGGCATCCCTCTGTAAGGGTCTTGGGGTaGGTTCAAGTCAGGGGAAGTTGCAGACTGGACCGG +
Preference number: 6 (lower is better)
Translates to: EAWWHPSVRVLG*VQVRGSCRLDR
Trigger: CCGGTCCAGTCTGCAACTTCCCCTGACTTGAACCCACCCCAAGACCCTTACAGAGGGATGCCACCAGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 23 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS CAA 72 bp GCCCTGGAGGCCTGGTGGCATCCCTCTGTAAGGGTCTaGGGGTGGGTTCAAGTCAGGGGAAGTTGCAGACTG +
Preference number: 6 (lower is better)
Translates to: ALEAWWHPSVRV*GWVQVRGSCRL
Trigger: CAGTCTGCAACTTCCCCTGACTTGAACCCACCCCAAGACCCTTACAGAGGGATGCCACCAGGCCTCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 23 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS CAA 90 bp GCCAGGTTCCCCGTAGGTAGCACACTTCCCCCGAGGCCTGGCATTTaGTGCACGCCAGCATCACTTGAGCCAGTGAAATGTCCACTCGCC +
Preference number: 6 (lower is better)
Translates to: ARFPVGSTLPPRPGI*CTPASLEPVKCPLA
Trigger: GGCGAGTGGACATTTCACTGGCTCAAGTGATGCTGGCGTGCACAAAATGCCAGGCCTCGGGGGAAGTGTGCTACCTACGGGGAACCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000066717.12
CDS CAA 90 bp AGAAGACTAGTTCCGTACCCTGAGCCCAGGCTACCCATCGCTCCGTaGTGGGAGGGTCCCATGATCCCATGCATGTCCCCATGGCCACCA +
Preference number: 6 (lower is better)
Translates to: RRLVPYPEPRLPIAP*WEGPMIPCMSPWPP
Trigger: TGGTGGCCATGGGGACATGCATGGGATCATGGGACCCTCCCACAACGGAGCGATGGGTAGCCTGGGCTCAGGGTACGGAACTAGTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 25 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000200862.4
ENSMUST00000201037.4
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS GCA 72 bp GGGAGCCAGGTTTGGTGGGCGAAAGGGTTCCTGGATTaGCCATATCCATGTCCCCTCCGAGGAGACTCTGCT +
Preference number: 6 (lower is better)
Translates to: GSQVWWAKGFLD*PYPCPLRGDSA
Trigger: AGCAGAGTCTCCTCGGAGGGGACATGGATATGGGCAATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000128706.8
ENSMUST00000201124.4
ENSMUST00000201235.4
ENSMUST00000201288.4
ENSMUST00000201299.4
ENSMUST00000201537.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS GCA 72 bp GGGAGCCAGGTTTGGTGGGCGAAAGGGTTCCTGGATTaGCCATATCCATGTCCCCTCCGAGGAGACTCTGGT +
Preference number: 6 (lower is better)
Translates to: GSQVWWAKGFLD*PYPCPLRGDSG
Trigger: ACCAGAGTCTCCTCGGAGGGGACATGGATATGGGCAATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000202074.4
ENSMUST00000202674.4
CDS GCA 72 bp AAGGATAGCCTGGCGAGTCCCTGTTGTAGTCGGCAGTaGTGGCTGAAGGAGCGTAGACCTGGTGGCAACCCT +
Preference number: 6 (lower is better)
Translates to: KDSLASPCCSRQ*WLKERRPGGNP
Trigger: AGGGTTGCCACCAGGTCTACGCTCCTTCAGCCAGCACTGCCGACTACAACAGGGACTCGCCAGGCTATCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000202610.4
ENSMUST00000202772.4
CDS CCA 72 bp AGTTGTGGGACCGGAACCTGGTTTGGCAGGAGAGAATaGCTGCCTCTCAGAGCCACGCCATCTTCACGGTGG +
Preference number: 6 (lower is better)
Translates to: SCGTGTWFGRRE*LPLRATPSSRW
Trigger: CCACCGTGAAGATGGCGTGGCTCTGAGAGGCAGCCATTCTCTCCTGCCAAACCAGGTTCCGGTCCCACAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS CAA 72 bp TGGGAGCCAGGTTTGGTGGGCGAAAGGGTTCCTGGATaGCCCATATCCATGTCCCCTCCGAGGAGACTCTGC +
Preference number: 6 (lower is better)
Translates to: WEPGLVGERVPG*PISMSPPRRLC
Trigger: GCAGAGTCTCCTCGGAGGGGACATGGATATGGGCAATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000128706.8
ENSMUST00000201124.4
ENSMUST00000201235.4
ENSMUST00000201288.4
ENSMUST00000201299.4
ENSMUST00000201537.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
CDS CAA 72 bp TGGGAGCCAGGTTTGGTGGGCGAAAGGGTTCCTGGATaGCCCATATCCATGTCCCCTCCGAGGAGACTCTGG +
Preference number: 6 (lower is better)
Translates to: WEPGLVGERVPG*PISMSPPRRLW
Trigger: CCAGAGTCTCCTCGGAGGGGACATGGATATGGGCAATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000202074.4
ENSMUST00000202674.4
CDS CAA 90 bp GCATCCCTCTGTAAGGGTCTTGGGGTGGGTTCAAGTCAGGGGAAGTaGCAGACTGGACCGGAAGTTGTGGGACCGGAACCTGGTTTGGCA +
Preference number: 6 (lower is better)
Translates to: ASLCKGLGVGSSQGK*QTGPEVVGPEPGLA
Trigger: TGCCAAACCAGGTTCCGGTCCCACAACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTGAACCCACCCCAAGACCCTTACAGAGGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 23 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS GCA 72 bp GTAAGGGTCTTGGGGTGGGTTCAAGTCAGGGGAAGTTaGAGACTGGACCGGAAGTTGTGGGACCGGAACCTG +
Preference number: 6 (lower is better)
Translates to: VRVLGWVQVRGS*RLDRKLWDRNL
Trigger: CAGGTTCCGGTCCCACAACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTGAACCCACCCCAAGACCCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 23 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS GCA 72 bp AAGGATAGCCTGGCGAGTCCCTGTTGTAGTCGGCAGTaGTGGCTGAAGGAGCGTAGACCTCTGCTCTCCCTT +
Preference number: 6 (lower is better)
Translates to: KDSLASPCCSRQ*WLKERRPLLSL
Trigger: AAGGGAGAGCAGAGGTCTACGCTCCTTCAGCCAGCACTGCCGACTACAACAGGGACTCGCCAGGCTATCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000202474.4
CDS CCA 72 bp GTACTGGGAGCCAGGTTTGGTGGGCGAAAGGGTTCCTaGATTGCCCATATCCATGTCCCCTCCGAGGAGACT +
Preference number: 6 (lower is better)
Translates to: VLGARFGGRKGS*IAHIHVPSEET
Trigger: AGTCTCCTCGGAGGGGACATGGATATGGGCAATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000128706.8
ENSMUST00000201124.4
ENSMUST00000201235.4
ENSMUST00000201288.4
ENSMUST00000201299.4
ENSMUST00000201537.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202074.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
CDS CCA 72 bp TCTTGGGGTGGGTTCAAGTCAGGGGAAGTTGCAGACTaGACCGGAAGTTGTGGGACCGGAACCTGGTTTGGC +
Preference number: 6 (lower is better)
Translates to: SWGGFKSGEVAD*TGSCGTGTWFG
Trigger: GCCAAACCAGGTTCCGGTCCCACAACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTGAACCCACCCCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 23 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS CAA 72 bp TCTTCACGGTGGGCCCCAACCATGAGCGAGTGTCTGTaGGCTGAGAGAAGACTAGTTCCGTACCCTGAGCCC +
Preference number: 6 (lower is better)
Translates to: SSRWAPTMSECL*AERRLVPYPEP
Trigger: GGGCTCAGGGTACGGAACTAGTCTTCTCTCAGCCAACAGACACTCGCTCATGGTTGGGGCCCACCGTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 24 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201037.4
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS CAA 72 bp TTGATATCTCGGACCCTCAGGCGCTCACGGGCATTATaGGCCATCCTCCGTTCCTTCTCGCGCTCAGCCTTC +
Preference number: 6 (lower is better)
Translates to: LISRTLRRSRAL*AILRSFSRSAF
Trigger: GAAGGCTGAGCGCGAGAAGGAACGGAGGATGGCCAATAATGCCCGTGAGCGCCTGAGGGTCCGAGATATCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS GCA 72 bp AAGGATAGCCTGGCGAGTCCCTGTTGTAGTCGGCAGTaGTGGCTGAAGGAGCGTAGACTGAAGACGGCAAAC +
Preference number: 6 (lower is better)
Translates to: KDSLASPCCSRQ*WLKERRLKTAN
Trigger: GTTTGCCGTCTTCAGTCTACGCTCCTTCAGCCAGCACTGCCGACTACAACAGGGACTCGCCAGGCTATCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 30 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000200813.4
ENSMUST00000200862.4
ENSMUST00000200966.4
ENSMUST00000201094.4
ENSMUST00000201124.4
ENSMUST00000201181.4
ENSMUST00000201205.4
ENSMUST00000201235.4
ENSMUST00000201288.4
ENSMUST00000201410.4
ENSMUST00000201627.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202350.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202477.4
ENSMUST00000202674.4
ENSMUST00000202765.4
ENSMUST00000202937.4
ENSMUST00000207214.2
ENSMUST00000209174.2
CDS CCA 72 bp CAAGTCAGGGGAAGTTGCAGACTGGACCGGAAGTTGTaGGACCGGAACCTGGTTTGGCAGGAGAGAATGGCT +
Preference number: 6 (lower is better)
Translates to: QVRGSCRLDRKL*DRNLVWQERMA
Trigger: AGCCATTCTCTCCTGCCAAACCAGGTTCCGGTCCCACAACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS CAA 72 bp TGTAAGGGTCTTGGGGTGGGTTCAAGTCAGGGGAAGTaGCAGACTGGACCGGAAGTTGTGGGACCGGAACCT +
Preference number: 6 (lower is better)
Translates to: CKGLGVGSSQGK*QTGPEVVGPEP
Trigger: AGGTTCCGGTCCCACAACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTGAACCCACCCCAAGACCCTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 23 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS CAA 72 bp GTGTCTTGCAGGTTCTCATCGCCCTCGTCGTCGGATTaGATCTCAGAGCTACCAGAAGACACGCTCTGGCCC +
Preference number: 6 (lower is better)
Translates to: VSCRFSSPSSSD*ISELPEDTLWP
Trigger: GGGCCAGAGCGTGTCTTCTGGTAGCTCTGAGATCAAATCCGACGACGAGGGCGATGAGAACCTGCAAGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS CAA 90 bp CTGTTCCGTTGGCAGGGGGTGTGCAGGAAGAGGTGCTGTAATGGTTaGTGCCACTACGATGGAACGTGGACATCGGAGGAAGACTGGAGT +
Preference number: 6 (lower is better)
Translates to: LFRWQGVCRKRCCNG*CHYDGTWTSEEDWS
Trigger: ACTCCAGTCTTCCTCCGATGTCCACGTTCCATCGTAGTGGCACAAACCATTACAGCACCTCTTCCTGCACACCCCCTGCCAACGGAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 32 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000145918.5
ENSMUST00000200703.4
ENSMUST00000200862.4
ENSMUST00000200921.4
ENSMUST00000201037.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000201964.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202751.4
ENSMUST00000202765.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS TCA 72 bp CCCGAGGCCTGGCATTTTGTGCACGCCAGCATCACTTaGGCCAGTGAAATGTCCACTCGCCAAAGAAGTTGG +
Preference number: 6 (lower is better)
Translates to: PEAWHFVHASIT*ASEMSTRQRSW
Trigger: CCAACTTCTTTGGCGAGTGGACATTTCACTGGCTCAAGTGATGCTGGCGTGCACAAAATGCCAGGCCTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066717.12
CDS TCA 72 bp TGTCTTGCAGGTTCTCATCGCCCTCGTCGTCGGATTTaGTCTCAGAGCTACCAGAAGACACGCTCTGGCCCT +
Preference number: 6 (lower is better)
Translates to: CLAGSHRPRRRI*SQSYQKTRSGP
Trigger: AGGGCCAGAGCGTGTCTTCTGGTAGCTCTGAGATCAAATCCGACGACGAGGGCGATGAGAACCTGCAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 23 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS TCA 72 bp GCCTGGCGAGTCCCTGTTGTAGTCGGCAGTGCTGGCTaGAGGAGCGTAGACCGCTTTCCCATTATAGTAGTA +
Preference number: 6 (lower is better)
Translates to: AWRVPVVVGSAG*RSVDRFPIIVV
Trigger: TACTACTATAATGGGAAAGCGGTCTACGCTCCTTCAGCCAGCACTGCCGACTACAACAGGGACTCGCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000201091.4
ENSMUST00000202751.4
ENSMUST00000209116.2
CDS GCA 72 bp CAGGGGGTGTGCAGGAAGAGGTGCTGTAATGGTTTGTaGCACTACGATGGAACGTGGACATCGGAGGAAGAC +
Preference number: 6 (lower is better)
Translates to: QGVCRKRCCNGL*HYDGTWTSEED
Trigger: GTCTTCCTCCGATGTCCACGTTCCATCGTAGTGGCACAAACCATTACAGCACCTCTTCCTGCACACCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 32 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000145918.5
ENSMUST00000200703.4
ENSMUST00000200862.4
ENSMUST00000200921.4
ENSMUST00000201037.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000201964.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202751.4
ENSMUST00000202765.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS GCA 72 bp AAGGATAGCCTGGCGAGTCCCTGTTGTAGTCGGCAGTaGTGGCTGAAGGAGCGTAGACCGCTTTCCCATTAT +
Preference number: 6 (lower is better)
Translates to: KDSLASPCCSRQ*WLKERRPLSHY
Trigger: ATAATGGGAAAGCGGTCTACGCTCCTTCAGCCAGCACTGCCGACTACAACAGGGACTCGCCAGGCTATCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000201091.4
ENSMUST00000202751.4
ENSMUST00000209116.2
CDS CAA 72 bp TGGCAGGGGGTGTGCAGGAAGAGGTGCTGTAATGGTTaGTGCCACTACGATGGAACGTGGACATCGGAGGAA +
Preference number: 6 (lower is better)
Translates to: WQGVCRKRCCNG*CHYDGTWTSEE
Trigger: TTCCTCCGATGTCCACGTTCCATCGTAGTGGCACAAACCATTACAGCACCTCTTCCTGCACACCCCCTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 32 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000145918.5
ENSMUST00000200703.4
ENSMUST00000200862.4
ENSMUST00000200921.4
ENSMUST00000201037.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000201964.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202751.4
ENSMUST00000202765.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS CAA 72 bp GTTCAAGTCAGGGGAAGTTGCAGACTGGACCGGAAGTaGTGGGACCGGAACCTGGTTTGGCAGGAGAGAATG +
Preference number: 6 (lower is better)
Translates to: VQVRGSCRLDRK*WDRNLVWQERM
Trigger: CATTCTCTCCTGCCAAACCAGGTTCCGGTCCCACAACTTCCGGTCCAGTCTGCAACTTCCCCTGACTTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000202937.4
CDS TCA 72 bp TACGATGGAACGTGGACATCGGAGGAAGACTGGAGTTaGTGTCTGCCGAGGAGTGGGATGGATAGCTCTTGC +
Preference number: 6 (lower is better)
Translates to: YDGTWTSEEDWS*CLPRSGMDSSC
Trigger: GCAAGAGCTATCCATCCCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCCGATGTCCACGTTCCATCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209116.2
CDS TCA 72 bp TACGATGGAACGTGGACATCGGAGGAAGACTGGAGTTaGTGTCTGCCGAGGAGTGGGATGGATAGCTCGCTT +
Preference number: 6 (lower is better)
Translates to: YDGTWTSEEDWS*CLPRSGMDSSL
Trigger: AAGCGAGCTATCCATCCCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCCGATGTCCACGTTCCATCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201037.4
CDS GCA 72 bp GAACGTGGACATCGGAGGAAGACTGGAGTTGATGTCTaGCGAGGAGTGGGATGGATAGCTCGCTTTCCCATT +
Preference number: 6 (lower is better)
Translates to: ERGHRRKTGVDV*RGVGWIARFPI
Trigger: AATGGGAAAGCGAGCTATCCATCCCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCCGATGTCCACGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000201037.4
CDS CCA 72 bp TGCCGAGGAGTGGGATGGATAGCTCAAACGTTCATGTaGATGCAGGCTACAGTAGCTGCTGGACTGTGGGAT +
Preference number: 6 (lower is better)
Translates to: CRGVGWIAQTFM*MQATVAAGLWD
Trigger: ATCCCACAGTCCAGCAGCTACTGTAGCCTGCATCCACATGAACGTTTGAGCTATCCATCCCACTCCTCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 35 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000145918.5
ENSMUST00000200703.4
ENSMUST00000200862.4
ENSMUST00000200921.4
ENSMUST00000200966.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201124.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000201964.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202350.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202751.4
ENSMUST00000202765.4
ENSMUST00000202772.4
ENSMUST00000202937.4
ENSMUST00000209174.2
CDS TCA 72 bp ACTACTGTGAAGAGGCCTCCGGCGGGCATTATTGCTTaGATACTGATAGTACTGGGAGCCAGGTTTGGTGGG +
Preference number: 6 (lower is better)
Translates to: TTVKRPPAGIIA*ILIVLGARFGG
Trigger: CCCACCAAACCTGGCTCCCAGTACTATCAGTATTCAAGCAATAATGCCCGCCGGAGGCCTCTTCACAGTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 34 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000128706.8
ENSMUST00000200813.4
ENSMUST00000200862.4
ENSMUST00000200966.4
ENSMUST00000201094.4
ENSMUST00000201124.4
ENSMUST00000201181.4
ENSMUST00000201205.4
ENSMUST00000201235.4
ENSMUST00000201288.4
ENSMUST00000201299.4
ENSMUST00000201410.4
ENSMUST00000201537.4
ENSMUST00000201627.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202074.4
ENSMUST00000202116.4
ENSMUST00000202350.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202477.4
ENSMUST00000202674.4
ENSMUST00000202765.4
ENSMUST00000202937.4
ENSMUST00000207214.2
ENSMUST00000209174.2
CDS TCA 72 bp TACGATGGAACGTGGACATCGGAGGAAGACTGGAGTTaGTGTCTGCCGAGGAGTGGGATGGATAGCTCAAAC +
Preference number: 6 (lower is better)
Translates to: YDGTWTSEEDWS*CLPRSGMDSSN
Trigger: GTTTGAGCTATCCATCCCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCCGATGTCCACGTTCCATCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 33 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000145918.5
ENSMUST00000200703.4
ENSMUST00000200862.4
ENSMUST00000200921.4
ENSMUST00000200966.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000201964.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202751.4
ENSMUST00000202765.4
ENSMUST00000202772.4
ENSMUST00000202937.4
ENSMUST00000209174.2
CDS GCA 72 bp TGGCACTACTGTGAAGAGGCCTCCGGCGGGCATTATTaGTTGAATACTGATAGTACTGGGAGCCAGGTTTGG +
Preference number: 6 (lower is better)
Translates to: WHYCEEASGGHY*LNTDSTGSQVW
Trigger: CCAAACCTGGCTCCCAGTACTATCAGTATTCAAGCAATAATGCCCGCCGGAGGCCTCTTCACAGTAGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 34 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000128706.8
ENSMUST00000200813.4
ENSMUST00000200862.4
ENSMUST00000200966.4
ENSMUST00000201094.4
ENSMUST00000201124.4
ENSMUST00000201181.4
ENSMUST00000201205.4
ENSMUST00000201235.4
ENSMUST00000201288.4
ENSMUST00000201299.4
ENSMUST00000201410.4
ENSMUST00000201537.4
ENSMUST00000201627.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202074.4
ENSMUST00000202116.4
ENSMUST00000202350.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202477.4
ENSMUST00000202674.4
ENSMUST00000202765.4
ENSMUST00000202937.4
ENSMUST00000207214.2
ENSMUST00000209174.2
CDS GCA 72 bp GAACGTGGACATCGGAGGAAGACTGGAGTTGATGTCTaGCGAGGAGTGGGATGGATAGCTCAAACGTTCATG +
Preference number: 6 (lower is better)
Translates to: ERGHRRKTGVDV*RGVGWIAQTFM
Trigger: CATGAACGTTTGAGCTATCCATCCCACTCCTCGGCAGACATCAACTCCAGTCTTCCTCCGATGTCCACGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 34 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000145918.5
ENSMUST00000200703.4
ENSMUST00000200862.4
ENSMUST00000200921.4
ENSMUST00000200966.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000201964.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202350.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202751.4
ENSMUST00000202765.4
ENSMUST00000202772.4
ENSMUST00000202937.4
ENSMUST00000209174.2
CDS CCA 72 bp TTCATGTGGATGCAGGCTACAGTAGCTGCTGGACTGTaGGATATGAGAAGAATTGCCCAGCATCCCTCCGTA +
Preference number: 6 (lower is better)
Translates to: FMWMQATVAAGL*DMRRIAQHPSV
Trigger: TACGGAGGGATGCTGGGCAATTCTTCTCATATCCCACAGTCCAGCAGCTACTGTAGCCTGCATCCACATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 35 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000145918.5
ENSMUST00000200703.4
ENSMUST00000200862.4
ENSMUST00000200921.4
ENSMUST00000200966.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201124.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000201964.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202350.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202751.4
ENSMUST00000202765.4
ENSMUST00000202772.4
ENSMUST00000202937.4
ENSMUST00000209174.2
CDS CAA 72 bp AAGACGGCAAACCCGGAGGAACTTTTCGGACTTTCTTaGTCTGTACCTCCATGGCACTACTGTGAAGAGGCC +
Preference number: 6 (lower is better)
Translates to: KTANPEELFGLS*SVPPWHYCEEA
Trigger: GGCCTCTTCACAGTAGTGCCATGGAGGTACAGACAAAGAAAGTCCGAAAAGTTCCTCCGGGTTTGCCGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 32 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000128706.8
ENSMUST00000200813.4
ENSMUST00000200862.4
ENSMUST00000200966.4
ENSMUST00000201094.4
ENSMUST00000201124.4
ENSMUST00000201181.4
ENSMUST00000201205.4
ENSMUST00000201235.4
ENSMUST00000201288.4
ENSMUST00000201410.4
ENSMUST00000201537.4
ENSMUST00000201627.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202350.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202477.4
ENSMUST00000202674.4
ENSMUST00000202765.4
ENSMUST00000202937.4
ENSMUST00000207214.2
ENSMUST00000209174.2
CDS CCA 72 bp TGCTTGAATACTGATAGTACTGGGAGCCAGGTTTGGTaGGCGAAAGGGTTCCTGGATTGCCCATATCCATGT +
Preference number: 6 (lower is better)
Translates to: CLNTDSTGSQVW*AKGFLDCPYPC
Trigger: ACATGGATATGGGCAATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGTACTATCAGTATTCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000128706.8
ENSMUST00000201124.4
ENSMUST00000201235.4
ENSMUST00000201288.4
ENSMUST00000201299.4
ENSMUST00000201537.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202074.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202674.4
CDS CCA 72 bp TCAAACGTTCATGTGGATGCAGGCTACAGTAGCTGCTaGACTGTGGGATATGAGAAGAATTGCCCAGCATCC +
Preference number: 6 (lower is better)
Translates to: SNVHVDAGYSSC*TVGYEKNCPAS
Trigger: GGATGCTGGGCAATTCTTCTCATATCCCACAGTCCAGCAGCTACTGTAGCCTGCATCCACATGAACGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 35 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114977.5
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000145918.5
ENSMUST00000200703.4
ENSMUST00000200862.4
ENSMUST00000200921.4
ENSMUST00000200966.4
ENSMUST00000201091.4
ENSMUST00000201094.4
ENSMUST00000201124.4
ENSMUST00000201205.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000201964.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202350.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202751.4
ENSMUST00000202765.4
ENSMUST00000202772.4
ENSMUST00000202937.4
ENSMUST00000209174.2
CDS TCA 72 bp ACAGAGAGTACGGAGCAAAAACCAGGCAGTACTTACTaGAGACGGCAAACCCGGAGGAACTTTTCGGACTTT +
Preference number: 6 (lower is better)
Translates to: TESTEQKPGSTY*RRQTRRNFSDF
Trigger: AAAGTCCGAAAAGTTCCTCCGGGTTTGCCGTCTTCAGTAAGTACTGCCTGGTTTTTGCTCCGTACTCTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000128706.8
CDS CCA 72 bp TATTGCTTGAATACTGATAGTACTGGGAGCCAGGTTTaGTGGGCGAAAGGGTTCCTGGATTGCCCATATCCA +
Preference number: 6 (lower is better)
Translates to: YCLNTDSTGSQV*WAKGFLDCPYP
Trigger: TGGATATGGGCAATCCAGGAACCCTTTCGCCCACCAAACCTGGCTCCCAGTACTATCAGTATTCAAGCAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 34 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000128706.8
ENSMUST00000200813.4
ENSMUST00000200862.4
ENSMUST00000200966.4
ENSMUST00000201094.4
ENSMUST00000201124.4
ENSMUST00000201181.4
ENSMUST00000201205.4
ENSMUST00000201235.4
ENSMUST00000201288.4
ENSMUST00000201299.4
ENSMUST00000201410.4
ENSMUST00000201537.4
ENSMUST00000201627.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202057.4
ENSMUST00000202074.4
ENSMUST00000202116.4
ENSMUST00000202350.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202458.4
ENSMUST00000202477.4
ENSMUST00000202674.4
ENSMUST00000202765.4
ENSMUST00000202937.4
ENSMUST00000207214.2
ENSMUST00000209174.2
CDS TCA 72 bp TCTGGAATTGACAAAAGGTGGAGAGAGATTGTCATGTaGCCCAAGATCCCTGCTAGTCATGTGGTCATAGGG +
Preference number: 6 (lower is better)
Translates to: SGIDKRWREIVM*PKIPASHVVIG
Trigger: CCCTATGACCACATGACTAGCAGGGATCTTGGGTCACATGACAATCTCTCTCCACCTTTTGTCAATTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 20 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114980.8
ENSMUST00000114982.8
ENSMUST00000114985.10
ENSMUST00000128706.8
ENSMUST00000201235.4
ENSMUST00000201288.4
ENSMUST00000201299.4
ENSMUST00000201537.4
ENSMUST00000201631.4
ENSMUST00000201781.4
ENSMUST00000202074.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202674.4
ENSMUST00000202772.4
ENSMUST00000203002.4
CDS CAA 90 bp GACCTAGTAATTGATTTGATATCCTTCTTGTCGTCATCTAATTTCTaGTCCTCAGAAGATTTTGTGTCTTGCAGGTTCTCATCGCCCTCG +
Preference number: 6 (lower is better)
Translates to: DLVIDLISFLSSSNF*SSEDFVSCRFSSPS
Trigger: CGAGGGCGATGAGAACCTGCAAGACACAAAATCTTCTGAGGACAAGAAATTAGATGACGACAAGAAGGATATCAAATCAATTACTAGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114985.10
ENSMUST00000201205.4
ENSMUST00000201781.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202937.4
CDS CAA 90 bp TTGCTAGTAATTGATTTGATATCCTTCTTGTCGTCATCTAATTTCTaGTCCTCAGAAGATTTTGTGTCTTGCAGGTTCTCATCGCCCTCG +
Preference number: 6 (lower is better)
Translates to: LLVIDLISFLSSSNF*SSEDFVSCRFSSPS
Trigger: CGAGGGCGATGAGAACCTGCAAGACACAAAATCTTCTGAGGACAAGAAATTAGATGACGACAAGAAGGATATCAAATCAATTACTAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000201094.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS CAA 72 bp GTCAGGTCCTCATCATCGTTATTGCTAGTAATTGATTaGATATCCTTCTTGTCGTCATCTAATTTCTTGTCC +
Preference number: 6 (lower is better)
Translates to: VRSSSSLLLVID*ISFLSSSNFLS
Trigger: GGACAAGAAATTAGATGACGACAAGAAGGATATCAAATCAATTACTAGCAATAACGATGATGAGGACCTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENSMUST00000114977.5
ENSMUST00000114982.8
ENSMUST00000201094.4
ENSMUST00000201410.4
ENSMUST00000201631.4
ENSMUST00000202057.4
ENSMUST00000202116.4
ENSMUST00000202354.4
ENSMUST00000202458.4
ENSMUST00000202474.4
ENSMUST00000202477.4
ENSMUST00000202674.4
ENSMUST00000202772.4
CDS CAA 90 bp AGGTCCTCATCATCGTTATTGCTAGATCTTGACCTAGTAATTGATTaGATATCCTTCTTGTCGTCATCTAATTTCTTGTCCTCAGAAGAT +
Preference number: 6 (lower is better)
Translates to: RSSSSLLLDLDLVID*ISFLSSSNFLSSED
Trigger: ATCTTCTGAGGACAAGAAATTAGATGACGACAAGAAGGATATCAAATCAATTACTAGGTCAAGATCTAGCAATAACGATGATGAGGACCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000066717.12
ENSMUST00000078486.13
ENSMUST00000114978.9
ENSMUST00000114980.8
ENSMUST00000114985.10
ENSMUST00000201205.4
ENSMUST00000201781.4
ENSMUST00000202435.4
ENSMUST00000202610.4
ENSMUST00000202937.4